CsGy1G009540 (gene) Cucumber (Gy14) v2

Overview
NameCsGy1G009540
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionRibonucleoside-diphosphate reductase subunit beta
LocationChr1 : 5933621 .. 5936193 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTGGAATTAAAAAGTGGAGGAGGAGAAGTGTTTGTTTGTTTTAGTTGTAAAATTATGTGATGTTAACGAAAAAAATGGTTAATTAGATTTATGAAGAATGCGGCATAGGAAATCGCAATCAGAGCAGCTTCTTCCTTCTTAATCTTCAAAAAGTGGAAGTAAAATGTCGAATCCAGTTGAACAAACCCGTGAAGGAGGAGAAGAAGAAGAAGACCCTAAGCCATCTGATGTAAACCCTAACGACCATGGTGATCAATCCCAAGAATGGGAAATCATGGCGCGAGCTTGGCTTTGCTCCTTCCCCGAGGCCAAAGCTGGTTCCATGGAAGAGGTTGAAGCCTGGATTGATTCCAACCATGCCTCTTTACCTGGAAATCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGCGCCTCATTTCTATTCAAAATTTAATGAGACTTTCCACTCAGGTCATACCACTACTTTACACTACTTATTACTTTCTTTTGCATTCTGCTTCTTCTTCGTGCTTAGAATTGAATGTTCATGATGTAGAGCTTGAATTGTTATGGCTTTTGTTTCAGAGGTAGTTTGTCAGGCAATGCTCTTTGTTCTTTAAGAGTTTTAGGGCATGTTTGGGAGTGATGAATCATTATCACACTAACCCAATTGTGATGATATAAAAACATTAAATTAATTAAATATGGTAGAATAATTTTAACAATTTCAAGATGACTGCTGAATATGAACTTACTATCCAAGTCCTTTTGTTGATGGATAAATAACTTCTAGATTCTGGTTATTGATTTGGTTTAGACTTATGAATTATTTGTAGTTCGATGAAACTGTTGTGCTTTCAGTGGCTAAACTGTTAAGGTACTGTAGTGTTTTTTCCTTTCATTGTCTTACCTCTAGCCATTCATCTGTGGTTGTTACATTTTTCTTTAATGAACCCTAAATGAAACTTATGATTTGTAATTTGATATGTTCCATGACAGGGAAAGGAAGACATTCATAAACAACAAGATGAGGGTGATCAGGGTGATCTTCCACACGCTCGATTTCAACGCACCGACCAGTGGATACCCGTTTATTCTTGGTTAGAGTCTCTACAACAAGATGAGGTTGTCAAGTCTAAGGAAATATCTGATTGGTTAACTGAAAATCCCACGATCAGAGATCAGCTGTGTTCAAGACATTCTCGTTATCATTTAATGCACTATATCAAAAAGTGTCATTTGAAGATATTGAAGAGAAAGGAAAAGAAAAAGGTATCTATTCATTTGTCATATGAACTGTTAGAGGATTCAGTTCACAGTGAAAGTTTTGACTGTTTAAGTGCCTAAAATTAGATTTACATTTAGAAAGTCAATCTAAACAGGTCTTGAGTCAACTAATTGAAACATTCTACTGATGATGATGTTCTGTGTTCTTAAGTTCTACAAAATCTCGTTGACTTATTTCGTTTGCCAGTATCTTATTACCTCATTTTATCTGGCATGTGTGAAGAAACATGGCATACAAACTAATCAATTTTACTCTTGTTTTGTTTTTTAATGAAGTTTTATTGTTTCTTGGGCAGGGTTCTCAGCTGCCTGACAAATCTCCTCTAAAAGTTCACAAGGATGTTTTTATGAAACCAGCACTACCTCCACGTAAACTTTTTTTTTTTTTCTGCATACTATATTTTCCTTAAAAGACTTCTTATCATCTCACCTTTCTTATAAGTTTACTTAAAGTTCATATTCAAACTTGATTTCTAAATGCTGGAACTGAAGGTTAGGATACAATTAAAAATAGTCTTTGCCCTCACAAATAACACCACTCTTATGTGTACTCGAACTTTCCTTTTGTTATTGTAGGTGATTCATTTAGCGATCTACCAAAAGACAGTGACATATATTTGACAAAACGAAAGGAAGCCTTTCGAAAATATGAAATGTAAGTTCACAATGTGACTTTTCAGTTTCGTTTTTGGTTAAATCGCACCTTGCTGTCAAAGAAATAGGGTGGTTTGTTTATAAATTTTGTTGAATCTTTCAGTTTAGTGGAGTTGGAGAAGTTGCTTGCCTCCAAATTTTCCAAGTCTCAAGGAGTCAATAATTAGAGAAACCTTGGGGACTGCCATCACTCTTGAGTTCGGAATATGGATCCAATTCCAAGTTTGTAGTCATTGCCAAGTTTTTTACCTTGTTCACTGCTGAATATTGTTGCCCCATTGCCTTGCTTTCTCACTCTAGAATAGAGTACTAGATCAGGCAAATCTATTAGATATTTAACTAACCTAATATGTTATATACCTCCATACCTTAGAAAATATTGATATCCCTTCGATCATGTATGGTGTGCCTCTAGTTCTATGCGTCATGTCGAATTTTAGATGATAACGTTGAGAATACTTTTTCTATGATATTTGATATTTCACTTCAATGTTCATTGAATTGATTAGGCTTACATTTTGTATAACGTTTTAGGAGAATGTTGAGGTAAAGTGTAAGCAAATGCATCGATAAAATATATCATTACTTCATAAAAGGATTGACGTTTATAAACAGTGTGAATGAATGTTTATTCTGAACAATTCATTCAT

mRNA sequence

TTTTGGAATTAAAAAGTGGAGGAGGAGAAGTGTTTGTTTGTTTTAGTTGTAAAATTATGTGATGTTAACGAAAAAAATGGTTAATTAGATTTATGAAGAATGCGGCATAGGAAATCGCAATCAGAGCAGCTTCTTCCTTCTTAATCTTCAAAAAGTGGAAGTAAAATGTCGAATCCAGTTGAACAAACCCGTGAAGGAGGAGAAGAAGAAGAAGACCCTAAGCCATCTGATGTAAACCCTAACGACCATGGTGATCAATCCCAAGAATGGGAAATCATGGCGCGAGCTTGGCTTTGCTCCTTCCCCGAGGCCAAAGCTGGTTCCATGGAAGAGGTTGAAGCCTGGATTGATTCCAACCATGCCTCTTTACCTGGAAATCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGCGCCTCATTTCTATTCAAAATTTAATGAGACTTTCCACTCAGGGAAAGGAAGACATTCATAAACAACAAGATGAGGGTGATCAGGGTGATCTTCCACACGCTCGATTTCAACGCACCGACCAGTGGATACCCGTTTATTCTTGGTTAGAGTCTCTACAACAAGATGAGGTTGTCAAGTCTAAGGAAATATCTGATTGGTTAACTGAAAATCCCACGATCAGAGATCAGCTGTGTTCAAGACATTCTCGTTATCATTTAATGCACTATATCAAAAAGTGTCATTTGAAGATATTGAAGAGAAAGGAAAAGAAAAAGGGTTCTCAGCTGCCTGACAAATCTCCTCTAAAAGTTCACAAGGATGTTTTTATGAAACCAGCACTACCTCCACGTGATTCATTTAGCGATCTACCAAAAGACAGTGACATATATTTGACAAAACGAAAGGAAGCCTTTCGAAAATATGAAATTTTAGTGGAGTTGGAGAAGTTGCTTGCCTCCAAATTTTCCAAGTCTCAAGGAGTCAATAATTAGAGAAACCTTGGGGACTGCCATCACTCTTGAGTTCGGAATATGGATCCAATTCCAAGTTTGTAGTCATTGCCAAGTTTTTTACCTTGTTCACTGCTGAATATTGTTGCCCCATTGCCTTGCTTTCTCACTCTAGAATAGAGTACTAGATCAGGCAAATCTATTAGATATTTAACTAACCTAATATGTTATATACCTCCATACCTTAGAAAATATTGATATCCCTTCGATCATGTATGGTGTGCCTCTAGTTCTATGCGTCATGTCGAATTTTAGATGATAACGTTGAGAATACTTTTTCTATGATATTTGATATTTCACTTCAATGTTCATTGAATTGATTAGGCTTACATTTTGTATAACGTTTTAGGAGAATGTTGAGGTAAAGTGTAAGCAAATGCATCGATAAAATATATCATTACTTCATAAAAGGATTGACGTTTATAAACAGTGTGAATGAATGTTTATTCTGAACAATTCATTCAT

Coding sequence (CDS)

ATGTCGAATCCAGTTGAACAAACCCGTGAAGGAGGAGAAGAAGAAGAAGACCCTAAGCCATCTGATGTAAACCCTAACGACCATGGTGATCAATCCCAAGAATGGGAAATCATGGCGCGAGCTTGGCTTTGCTCCTTCCCCGAGGCCAAAGCTGGTTCCATGGAAGAGGTTGAAGCCTGGATTGATTCCAACCATGCCTCTTTACCTGGAAATCTCAAATCAATGCCCCGCTCCGACCTTTGCCAGCGCCTCATTTCTATTCAAAATTTAATGAGACTTTCCACTCAGGGAAAGGAAGACATTCATAAACAACAAGATGAGGGTGATCAGGGTGATCTTCCACACGCTCGATTTCAACGCACCGACCAGTGGATACCCGTTTATTCTTGGTTAGAGTCTCTACAACAAGATGAGGTTGTCAAGTCTAAGGAAATATCTGATTGGTTAACTGAAAATCCCACGATCAGAGATCAGCTGTGTTCAAGACATTCTCGTTATCATTTAATGCACTATATCAAAAAGTGTCATTTGAAGATATTGAAGAGAAAGGAAAAGAAAAAGGGTTCTCAGCTGCCTGACAAATCTCCTCTAAAAGTTCACAAGGATGTTTTTATGAAACCAGCACTACCTCCACGTGATTCATTTAGCGATCTACCAAAAGACAGTGACATATATTTGACAAAACGAAAGGAAGCCTTTCGAAAATATGAAATTTTAGTGGAGTTGGAGAAGTTGCTTGCCTCCAAATTTTCCAAGTCTCAAGGAGTCAATAATTAG

Protein sequence

MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILVELEKLLASKFSKSQGVNN
Homology
[Close]
BLAST of CsGy1G009540 vs. NCBI nr
Match: XP_004152526.1 (PREDICTED: uncharacterized protein LOC101216205 [Cucumis sativus] >KGN64407.1 hypothetical protein Csa_1G050460 [Cucumis sativus])

HSP 1 Score: 521.2 bits (1341), Expect = 2.1e-144
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW
Sbjct: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR 120

Query: 121 TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL 180
           TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL
Sbjct: 121 TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL 180

Query: 181 KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV 240
           KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV
Sbjct: 181 KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV 240

Query: 241 ELEKLLASKFSKSQGVNN 259
           ELEKLLASKFSKSQGVNN
Sbjct: 241 ELEKLLASKFSKSQGVNN 258

[Close]
BLAST of CsGy1G009540 vs. NCBI nr
Match: XP_016901626.1 (PREDICTED: uncharacterized protein LOC107991313 [Cucumis melo])

HSP 1 Score: 485.7 bits (1249), Expect = 9.6e-134
Identity = 247/263 (93.92%), Postives = 250/263 (95.06%), Query Frame = 0 

Query: 1   MSNPVEQTREGGE--EEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60
           MSNPVE+TREG E  E EDPKPSDVNP+DHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE
Sbjct: 1   MSNPVERTREGEEEGEGEDPKPSDVNPSDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60

Query: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEG---DQGDLPH 120
           AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDE        LPH
Sbjct: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEAXXXXXXXLPH 120

Query: 121 ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC 180
           ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC
Sbjct: 121 ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC 180

Query: 181 HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRK 240
           HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYL KRKEAFRK
Sbjct: 181 HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLAKRKEAFRK 240

Query: 241 YEILVELEKLLASKFSKSQGVNN 259
           YEILVELEKLLA+KFSKSQGVNN
Sbjct: 241 YEILVELEKLLAAKFSKSQGVNN 263

[Close]
BLAST of CsGy1G009540 vs. NCBI nr
Match: XP_022137036.1 (uncharacterized protein LOC111008597 isoform X1 [Momordica charantia])

HSP 1 Score: 429.9 bits (1104), Expect = 6.2e-117
Identity = 217/256 (84.77%), Postives = 228/256 (89.06%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNP E+T     + E PKPSD+NP+D  D SQEWE MARAWLCSFPEA+AGSMEEVEAW
Sbjct: 1   MSNPAEET-----QGEQPKPSDLNPSDQSDHSQEWETMARAWLCSFPEARAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLS QGKE+I  Q        LPHARFQR
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSNQGKEEI--QXXXXXXXXLPHARFQR 120

Query: 121 TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL 180
           TDQWIPVYSWLESLQ +EVVKSK+ISDWLTENP+IRDQLCSRHSRYHLMHYIKKCHLKIL
Sbjct: 121 TDQWIPVYSWLESLQHEEVVKSKDISDWLTENPSIRDQLCSRHSRYHLMHYIKKCHLKIL 180

Query: 181 KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV 240
           KRKEKKKGSQ+PDKSPLKVHKDV MKPALPPRDSFSDLPKDSD+YL KRKEAFRKYEILV
Sbjct: 181 KRKEKKKGSQMPDKSPLKVHKDVLMKPALPPRDSFSDLPKDSDVYLAKRKEAFRKYEILV 240

Query: 241 ELEKLLASKFSKSQGV 257
           ELEKLLA  FSKSQGV
Sbjct: 241 ELEKLLAPNFSKSQGV 249

[Close]
BLAST of CsGy1G009540 vs. NCBI nr
Match: XP_022994449.1 (uncharacterized protein LOC111490167 [Cucurbita maxima])

HSP 1 Score: 418.7 bits (1075), Expect = 1.4e-113
Identity = 216/267 (80.90%), Postives = 227/267 (85.02%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNP EQ +EG E    PKPSD+NP+D  D SQEWE+MARAWL SFPEAKAGSMEEVEAW
Sbjct: 1   MSNPAEQIQEGAE----PKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIH-------KQQDEGDQGDL 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLS QGKE+I                   
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGXXXXXXXXXXXXXXXXX 120

Query: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENP+IRDQLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQLPD----KSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKR 240
           KCHLKILKRKEKKKGSQLP+    KSPLKVHKDV MKPALPPRDSFSDLPKDSD+YL KR
Sbjct: 181 KCHLKILKRKEKKKGSQLPEKSPHKSPLKVHKDVVMKPALPPRDSFSDLPKDSDVYLAKR 240

Query: 241 KEAFRKYEILVELEKLLASKFSKSQGV 257
           KEAFRKYEILVELEKLL++   KS+GV
Sbjct: 241 KEAFRKYEILVELEKLLSTNLCKSEGV 263

[Close]
BLAST of CsGy1G009540 vs. NCBI nr
Match: XP_023542742.1 (uncharacterized protein LOC111802563 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.9 bits (1034), Expect = 8.2e-109
Identity = 210/267 (78.65%), Postives = 220/267 (82.40%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNP EQ +EG E    PKPSD+NP+D  D SQEWE+MARAWL SFPEAKAGSMEEVEAW
Sbjct: 1   MSNPAEQIQEGAE----PKPSDLNPSDQSDHSQEWEVMARAWLSSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIH-------KQQDEGDQGDL 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLS QGKE+I                   
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSAQGKEEIQGXXXXXXXXXXXXXXXXX 120

Query: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENP+IRDQLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPSIRDQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQL----PDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKR 240
           KCHLKILKRKEKKKGSQL           VHKDV MKPALPPRDSFSDLPKDSD+YL KR
Sbjct: 181 KCHLKILKRKEKKKGSQLXXXXXXXXXXXVHKDVVMKPALPPRDSFSDLPKDSDVYLAKR 240

Query: 241 KEAFRKYEILVELEKLLASKFSKSQGV 257
           KEAFRKYEILVELEKLL++   KS+GV
Sbjct: 241 KEAFRKYEILVELEKLLSTNLCKSEGV 263

[Close]
BLAST of CsGy1G009540 vs. TAIR10
Match: AT5G50410.1 (unknown protein)

HSP 1 Score: 235.0 bits (598), Expect = 5.3e-62
Identity = 137/257 (53.31%), Postives = 176/257 (68.48%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSD---VNPNDHGDQSQEWEIMARAWLCSFPEAKA-GSMEE 60
           MSN  ++T E  + ++    SD    N N   + SQEWE MARAW+ +FP+AKA  S  E
Sbjct: 1   MSNSSDKTLEDEKVQQQQLESDDKISNTNQRTEPSQEWETMARAWVSAFPDAKAVVSAGE 60

Query: 61  VEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHA 120
           VE WI +N  SLP +L+ MPRS++  RL+SIQ+ MR +     D ++Q  E DQ     A
Sbjct: 61  VETWIGTNLDSLPADLRHMPRSEIVDRLLSIQHYMRPTP--SSDQNEQNVEADQQH--PA 120

Query: 121 RFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCH 180
           RFQRTDQW+PVYSWLESL   E+VKSK+IS+WL  NP ++ +L SRHSRYHL HY+KKCH
Sbjct: 121 RFQRTDQWLPVYSWLESLDNGELVKSKDISEWLDANPEVKQELSSRHSRYHLTHYVKKCH 180

Query: 181 LKILKRKEKKKGSQLPDKSPLKVHKDVFMK-PALPPRDSFSDLPKDSDIYLTKRKEAFRK 240
           LKILKRKEKK   +L   + ++VHK+   K  A    D  S++PKDSD+Y TK+KEA R+
Sbjct: 181 LKILKRKEKKGLIRLSRATAMEVHKEFGEKHHATLSADPMSNIPKDSDLYRTKQKEAKRR 240

Query: 241 YEILVELEKLLASKFSK 253
           +EILVELEK LA  F+K
Sbjct: 241 FEILVELEKRLAPHFAK 253

[Close]
BLAST of CsGy1G009540 vs. TrEMBL
Match: tr|A0A0A0LUD5|A0A0A0LUD5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050460 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 1.4e-144
Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0 

Query: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60
           MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW
Sbjct: 1   MSNPVEQTREGGEEEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVEAW 60

Query: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR 120
           IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR
Sbjct: 61  IDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDLPHARFQR 120

Query: 121 TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL 180
           TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL
Sbjct: 121 TDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKCHLKIL 180

Query: 181 KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV 240
           KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV
Sbjct: 181 KRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRKYEILV 240

Query: 241 ELEKLLASKFSKSQGVNN 259
           ELEKLLASKFSKSQGVNN
Sbjct: 241 ELEKLLASKFSKSQGVNN 258

[Close]
BLAST of CsGy1G009540 vs. TrEMBL
Match: tr|A0A1S4E072|A0A1S4E072_CUCME (uncharacterized protein LOC107991313 OS=Cucumis melo OX=3656 GN=LOC107991313 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 6.3e-134
Identity = 247/263 (93.92%), Postives = 250/263 (95.06%), Query Frame = 0 

Query: 1   MSNPVEQTREGGE--EEEDPKPSDVNPNDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60
           MSNPVE+TREG E  E EDPKPSDVNP+DHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE
Sbjct: 1   MSNPVERTREGEEEGEGEDPKPSDVNPSDHGDQSQEWEIMARAWLCSFPEAKAGSMEEVE 60

Query: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEG---DQGDLPH 120
           AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDE        LPH
Sbjct: 61  AWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEAXXXXXXXLPH 120

Query: 121 ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC 180
           ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC
Sbjct: 121 ARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIKKC 180

Query: 181 HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLTKRKEAFRK 240
           HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYL KRKEAFRK
Sbjct: 181 HLKILKRKEKKKGSQLPDKSPLKVHKDVFMKPALPPRDSFSDLPKDSDIYLAKRKEAFRK 240

Query: 241 YEILVELEKLLASKFSKSQGVNN 259
           YEILVELEKLLA+KFSKSQGVNN
Sbjct: 241 YEILVELEKLLAAKFSKSQGVNN 263

[Close]
BLAST of CsGy1G009540 vs. TrEMBL
Match: tr|M5WA44|M5WA44_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G151300 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 6.0e-84
Identity = 179/271 (66.05%), Postives = 202/271 (74.54%), Query Frame = 0 

Query: 1   MSNPVEQT------REGGEEEEDPKPSDVNPNDH-GDQSQEWEIMARAWLCSFPEAKAGS 60
           MSN  EQT         GEE E      V+ ND+  +QSQEWE MARAWLCSFPEAKA S
Sbjct: 1   MSNSAEQTLAIVAAATDGEEAE----QRVSDNDNTSEQSQEWETMARAWLCSFPEAKAVS 60

Query: 61  MEEVEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNLMRLSTQGKEDIHKQQDEGDQGDL 120
           M+EVEAWIDSN   +P  +KSMPR DLCQRLISIQN MRL  Q       ++ E +QGD+
Sbjct: 61  MDEVEAWIDSNFDFIPEGIKSMPRPDLCQRLISIQNCMRLPNQ-------EEKEENQGDI 120

Query: 121 PHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLTENPTIRDQLCSRHSRYHLMHYIK 180
           PHARFQRTDQW PVY WLESL +DEVVKSK+ISDWLTENP I++QLCSRHSRYHLMHYIK
Sbjct: 121 PHARFQRTDQWRPVYIWLESLDKDEVVKSKDISDWLTENPDIQEQLCSRHSRYHLMHYIK 180

Query: 181 KCHLKILKRKEKKKGSQLPD-KSPLKVHKDVFMK-PALPPR-----DSFSDLPKDSDIYL 240
           KCH+KILKR+EKKKG Q PD  +PLKVHKDV MK PA  P      +S  ++PKDSD+YL
Sbjct: 181 KCHMKILKRREKKKGVQQPDTPAPLKVHKDVLMKQPAQLPSPLSVCNSLINVPKDSDVYL 240

Query: 241 TKRKEAFRKYEILVELEKLLASKFSKSQGVN 258
           TKRKEA +KYEIL ELEKLLA  F K +  N
Sbjct: 241 TKRKEALQKYEILAELEKLLAPTFLKREDGN 260

[Close]
BLAST of CsGy1G009540 vs. TrEMBL
Match: tr|I1KC32|I1KC32_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100820572 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 4.3e-82
Identity = 163/229 (71.18%), Postives = 182/229 (79.48%), Query Frame = 0 

Query: 31  QSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNL 90
           QS+EWE MARAWLCSFPE K  SM EVEAWIDSN ASLP  L+SMPR DLC RLIS QN 
Sbjct: 21  QSEEWETMARAWLCSFPEPKEVSMAEVEAWIDSNLASLPEGLRSMPRPDLCHRLISFQNC 80

Query: 91  MRLSTQGKEDIHKQQDEGDQGDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLT 150
           MRL          Q+ E +Q DLPHARFQRTDQWIPVYSWLE+L +++VVKSKEISDWLT
Sbjct: 81  MRLP--------NQEREVNQLDLPHARFQRTDQWIPVYSWLETLDKEDVVKSKEISDWLT 140

Query: 151 ENPTIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPDK-SPLKVHKDVFMK-PA 210
           +NP +++QLCSRHSRYHLMHYIKKCHLKILKR+EKKKG + PDK S LKV KDV MK PA
Sbjct: 141 DNPKVQEQLCSRHSRYHLMHYIKKCHLKILKRREKKKGVEQPDKDSSLKVQKDVAMKHPA 200

Query: 211 LPPRDSFSDLPKDSDIYLTKRKEAFRKYEILVELEKLLASKFSKSQGVN 258
            PP  S S+LPKDSD++L KR EA+RKYEIL+ELEKLL   F K   VN
Sbjct: 201 PPPCSSVSNLPKDSDLFLAKRNEAYRKYEILLELEKLLTPVFKKQPSVN 241

[Close]
BLAST of CsGy1G009540 vs. TrEMBL
Match: tr|A0A0B2RJM9|A0A0B2RJM9_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040735 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 4.3e-82
Identity = 163/229 (71.18%), Postives = 182/229 (79.48%), Query Frame = 0 

Query: 31  QSQEWEIMARAWLCSFPEAKAGSMEEVEAWIDSNHASLPGNLKSMPRSDLCQRLISIQNL 90
           QS+EWE MARAWLCSFPE K  SM EVEAWIDSN ASLP  L+SMPR DLC RLIS QN 
Sbjct: 21  QSEEWETMARAWLCSFPEPKEVSMAEVEAWIDSNLASLPEGLRSMPRPDLCHRLISFQNC 80

Query: 91  MRLSTQGKEDIHKQQDEGDQGDLPHARFQRTDQWIPVYSWLESLQQDEVVKSKEISDWLT 150
           MRL          Q+ E +Q DLPHARFQRTDQWIPVYSWLE+L +++VVKSKEISDWLT
Sbjct: 81  MRLP--------NQEREVNQLDLPHARFQRTDQWIPVYSWLETLDKEDVVKSKEISDWLT 140

Query: 151 ENPTIRDQLCSRHSRYHLMHYIKKCHLKILKRKEKKKGSQLPDK-SPLKVHKDVFMK-PA 210
           +NP +++QLCSRHSRYHLMHYIKKCHLKILKR+EKKKG + PDK S LKV KDV MK PA
Sbjct: 141 DNPKVQEQLCSRHSRYHLMHYIKKCHLKILKRREKKKGVEQPDKDSSLKVQKDVAMKHPA 200

Query: 211 LPPRDSFSDLPKDSDIYLTKRKEAFRKYEILVELEKLLASKFSKSQGVN 258
            PP  S S+LPKDSD++L KR EA+RKYEIL+ELEKLL   F K   VN
Sbjct: 201 PPPCSSVSNLPKDSDLFLAKRNEAYRKYEILLELEKLLTPVFKKQPSVN 241

The following BLAST results are available for this feature:
BLAST of CsGy1G009540 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152526.12.1e-144100.00PREDICTED: uncharacterized protein LOC101216205 [Cucumis sativus] >KGN64407.1 hy... [more]
XP_016901626.19.6e-13493.92PREDICTED: uncharacterized protein LOC107991313 [Cucumis melo][more]
XP_022137036.16.2e-11784.77uncharacterized protein LOC111008597 isoform X1 [Momordica charantia][more]
XP_022994449.11.4e-11380.90uncharacterized protein LOC111490167 [Cucurbita maxima][more]
XP_023542742.18.2e-10978.65uncharacterized protein LOC111802563 [Cucurbita pepo subsp. pepo][more]
BLAST of CsGy1G009540 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G50410.15.3e-6253.31unknown protein[more]
BLAST of CsGy1G009540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy1G009540 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LUD5|A0A0A0LUD5_CUCSA1.4e-144100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050460 PE=4 SV=1[more]
tr|A0A1S4E072|A0A1S4E072_CUCME6.3e-13493.92uncharacterized protein LOC107991313 OS=Cucumis melo OX=3656 GN=LOC107991313 PE=... [more]
tr|M5WA44|M5WA44_PRUPE6.0e-8466.05Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G151300 PE=4 SV=1[more]
tr|I1KC32|I1KC32_SOYBN4.3e-8271.18Uncharacterized protein OS=Glycine max OX=3847 GN=100820572 PE=4 SV=1[more]
tr|A0A0B2RJM9|A0A0B2RJM9_GLYSO4.3e-8271.18Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040735 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019835 cytolysis
biological_process GO:0050829 defense response to Gram-negative bacterium
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G009540.1CsGy1G009540.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..115

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy1G009540Cla002616Watermelon (97103) v1cgybwmB010
CsGy1G009540Csa1G050460Cucumber (Chinese Long) v2cgybcuB001
CsGy1G009540MELO3C002358Melon (DHL92) v3.5.1cgybmeB022
CsGy1G009540ClCG03G003730Watermelon (Charleston Gray)cgybwcgB033
CsGy1G009540CSPI01G09510Wild cucumber (PI 183967)cgybcpiB001
CsGy1G009540CmaCh18G003200Cucurbita maxima (Rimu)cgybcmaB093
CsGy1G009540CmoCh18G002170Cucurbita moschata (Rifu)cgybcmoB082
CsGy1G009540Lsi02G005010Bottle gourd (USVL1VR-Ls)cgyblsiB018
CsGy1G009540Cp4.1LG09g09580Cucurbita pepo (Zucchini)cgybcpeB018
CsGy1G009540MELO3C002358.2Melon (DHL92) v3.6.1cgybmedB020
CsGy1G009540CsaV3_1G009620Cucumber (Chinese Long) v3cgybcucB002
CsGy1G009540Cla97C03G054870Watermelon (97103) v2cgybwmbB032
CsGy1G009540Bhi08G001225Wax gourdcgybwgoB029
CsGy1G009540Carg06794Silver-seed gourdcarcgybB0500
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy1G009540Cucumber (Gy14) v2cgybcgybB005
CsGy1G009540Cucurbita maxima (Rimu)cgybcmaB025
CsGy1G009540Cucurbita maxima (Rimu)cgybcmaB049
CsGy1G009540Cucurbita maxima (Rimu)cgybcmaB063
CsGy1G009540Cucurbita moschata (Rifu)cgybcmoB026
CsGy1G009540Cucurbita moschata (Rifu)cgybcmoB046
CsGy1G009540Cucurbita moschata (Rifu)cgybcmoB058
CsGy1G009540Cucurbita pepo (Zucchini)cgybcpeB049
CsGy1G009540Cucurbita pepo (Zucchini)cgybcpeB080
CsGy1G009540Cucurbita pepo (Zucchini)cgybcpeB123
CsGy1G009540Cucumber (Chinese Long) v2cgybcuB014
CsGy1G009540Bottle gourd (USVL1VR-Ls)cgyblsiB064
CsGy1G009540Melon (DHL92) v3.5.1cgybmeB046
CsGy1G009540Melon (DHL92) v3.6.1cgybmedB041
CsGy1G009540Watermelon (Charleston Gray)cgybwcgB069
CsGy1G009540Watermelon (97103) v1cgybwmB087
CsGy1G009540Wild cucumber (PI 183967)cgybcpiB013
CsGy1G009540Silver-seed gourdcarcgybB0373
CsGy1G009540Silver-seed gourdcarcgybB0989
CsGy1G009540Cucumber (Chinese Long) v3cgybcucB010
CsGy1G009540Watermelon (97103) v2cgybwmbB070