CsaV3_1G004870 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G004870
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	CASP-like protein
Location	chr1 : 3166162 .. 3166993 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCCTAAGGTATTAGCGTTGATTGGTATTGGACTTAGAATCTTCGTCTTCATATGTCTCCTCATCGCCTTGGTCGTAATTGCCACTGACAAATTGTCCCTCATTAATGGCTTCAAAGCAACCTTCAATGATATCCATGGATACAGGTTCTTCTCTACTCTGCTCTGCCCATCAATCTCATTTATACATTCACAATCAATACAAATTCACTACAACAAGTTATGCTTTGCTCATACTGTTTCTTGCAATGCAGGTACGTGTTGTCTGTTGCAGTTATAGGGTTAGCCCATACAATTTTACAACTGGGTTTCTCCATATACCATGTGCTTACCCAAAACATACCCTTTTGGAATGGACTTCCACAAGTCAACTACTACGCTGACCAGGTTGGTGACTAAGACAAATTACTTTTGAGATTCGAAAAAAACTTTGGGCTTACGAGTGAATCAAATGCATTACGGATATGCAGGTCATAACTTGGATGTTGGCCACGGGGGTTGGAGCTGGCTTTGCGGTCTCCCGAGAGCTGAAAAGTTATGTGGATTCAAGAACTAAGAAGGAATTTGGGGATAACGATTATGGGTTCTTCAGTCCAGCAATCGAGGAGCAGAAATCATTGATAGATGATTTCTTCAATAAGGCCACTGTTGCCACTGCCATTCTCTTCCTTGCTTTCATCTCCATGGCCACTCTCCTCCTTCTCTCTCCCTTCAATCGGATCAAACCAACTCCTCTTCCCGCACAAGATCCCGAGGCCCAAAAGTCTGAGGCCCAATCTTCACAGGTCCAACATACGGAGGCCCAATCATCGGAGCCCCCTTCTAGTTGA

mRNA sequence

ATGGATCCTAAGGTATTAGCGTTGATTGGTATTGGACTTAGAATCTTCGTCTTCATATGTCTCCTCATCGCCTTGGTCGTAATTGCCACTGACAAATTGTCCCTCATTAATGGCTTCAAAGCAACCTTCAATGATATCCATGGATACAGGTACGTGTTGTCTGTTGCAGTTATAGGGTTAGCCCATACAATTTTACAACTGGGTTTCTCCATATACCATGTGCTTACCCAAAACATACCCTTTTGGAATGGACTTCCACAAGTCAACTACTACGCTGACCAGGTCATAACTTGGATGTTGGCCACGGGGGTTGGAGCTGGCTTTGCGGTCTCCCGAGAGCTGAAAAGTTATGTGGATTCAAGAACTAAGAAGGAATTTGGGGATAACGATTATGGGTTCTTCAGTCCAGCAATCGAGGAGCAGAAATCATTGATAGATGATTTCTTCAATAAGGCCACTGTTGCCACTGCCATTCTCTTCCTTGCTTTCATCTCCATGGCCACTCTCCTCCTTCTCTCTCCCTTCAATCGGATCAAACCAACTCCTCTTCCCGCACAAGATCCCGAGGCCCAAAAGTCTGAGGCCCAATCTTCACAGGTCCAACATACGGAGGCCCAATCATCGGAGCCCCCTTCTAGTTGA

Coding sequence (CDS)

ATGGATCCTAAGGTATTAGCGTTGATTGGTATTGGACTTAGAATCTTCGTCTTCATATGTCTCCTCATCGCCTTGGTCGTAATTGCCACTGACAAATTGTCCCTCATTAATGGCTTCAAAGCAACCTTCAATGATATCCATGGATACAGGTACGTGTTGTCTGTTGCAGTTATAGGGTTAGCCCATACAATTTTACAACTGGGTTTCTCCATATACCATGTGCTTACCCAAAACATACCCTTTTGGAATGGACTTCCACAAGTCAACTACTACGCTGACCAGGTCATAACTTGGATGTTGGCCACGGGGGTTGGAGCTGGCTTTGCGGTCTCCCGAGAGCTGAAAAGTTATGTGGATTCAAGAACTAAGAAGGAATTTGGGGATAACGATTATGGGTTCTTCAGTCCAGCAATCGAGGAGCAGAAATCATTGATAGATGATTTCTTCAATAAGGCCACTGTTGCCACTGCCATTCTCTTCCTTGCTTTCATCTCCATGGCCACTCTCCTCCTTCTCTCTCCCTTCAATCGGATCAAACCAACTCCTCTTCCCGCACAAGATCCCGAGGCCCAAAAGTCTGAGGCCCAATCTTCACAGGTCCAACATACGGAGGCCCAATCATCGGAGCCCCCTTCTAGTTGA

Protein sequence

MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGLAHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDSRTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKPTPLPAQDPEAQKSEAQSSQVQHTEAQSSEPPSS

Homology

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BLAST of CsaV3_1G004870 vs. NCBI nr
Match: XP_011649480.1 (PREDICTED: CASP-like protein 4D2 [Cucumis sativus] >KGN63934.1 hypothetical protein Csa_1G029610 [Cucumis sativus])

HSP 1 Score: 367.1 bits (941), Expect = 4.1e-98
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60
           MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120
           AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180
           RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 TPLPAQDPE 190
           TPLPAQDPE
Sbjct: 181 TPLPAQDPE 189

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BLAST of CsaV3_1G004870 vs. NCBI nr
Match: XP_008454028.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo])

HSP 1 Score: 323.9 bits (829), Expect = 4.0e-85
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60
           MDPKVL LIGIG+RIFVFICLLIALVVIATDKLSLINGFKATFND+HGYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120
           AHTILQLGFSIYHVLTQNI FWNGLPQVNYYADQVITW+LAT VGAGFAVS ELKSYV+S
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180
           R  KEFGD  YGFFS  ++EQKSLIDDFF+KA +ATAILFLAFISMATLLLLSPFNRIKP
Sbjct: 121 RINKEFGDY-YGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 TPLPAQDPE 190
           TPLP QDPE
Sbjct: 181 TPLPTQDPE 188

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BLAST of CsaV3_1G004870 vs. NCBI nr
Match: XP_022137163.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 280.4 bits (716), Expect = 5.1e-72
Identity = 143/189 (75.66%), Postives = 161/189 (85.19%), Query Frame = 0


Query: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60
           MDPKV+A I IGLR F FICLLIALVVIATDKL+LI+G+KATFNDIHGYRYVLS+A+IGL
Sbjct: 1   MDPKVVAFIVIGLRSFTFICLLIALVVIATDKLALIDGYKATFNDIHGYRYVLSIAIIGL 60

Query: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120
           AHTILQLGFS+YHVLTQNIPFWNGLPQ NYYADQV+ W+LA+  GAGFAV+ ELK  VD 
Sbjct: 61  AHTILQLGFSLYHVLTQNIPFWNGLPQFNYYADQVLAWVLASAAGAGFAVTAELKRLVDE 120

Query: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180
             K   G  DY  F PA+++Q+SLIDDFF+KA +ATAILFLAF+SMATLLLLSPFNRIKP
Sbjct: 121 NIKNAVG--DYELFIPAVDQQESLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKP 180

Query: 181 TPLPAQDPE 190
                QDPE
Sbjct: 181 LETTTQDPE 187

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BLAST of CsaV3_1G004870 vs. NCBI nr
Match: XP_023524544.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232.3 bits (591), Expect = 1.6e-57
Identity = 120/182 (65.93%), Postives = 146/182 (80.22%), Query Frame = 0


Query: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60
           MD  V+A IGIGLRIF FICL IALVVIATDKL LI+G ++TFNDI GYRYVLSVA+IGL
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60

Query: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120
            HTILQLGFSIY+ +T+NIPFWNGLPQ NYY DQVI+W+L +  GAG AVS + K  ++ 
Sbjct: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120

Query: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180
               E G  D G    A+++QK L+DDFF++A +A+AILFLAF+S+AT+LLLSPFNR+KP
Sbjct: 121 VV--ENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKP 180

Query: 181 TP 183
            P
Sbjct: 181 IP 180

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BLAST of CsaV3_1G004870 vs. NCBI nr
Match: XP_022949251.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 228.4 bits (581), Expect = 2.3e-56
Identity = 119/182 (65.38%), Postives = 145/182 (79.67%), Query Frame = 0


Query: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60
           M   V+A IGIGLRIF FICLLIALVVIATDKL LI G ++TFNDI GYRYVL+VA+IGL
Sbjct: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRYVLAVAIIGL 60

Query: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120
            HTILQLGFSIY+ +T+NIPFW GLPQ NYY DQVI+W+LA+  GAG AVS + K  ++ 
Sbjct: 61  VHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNE 120

Query: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180
               E G  D G    A+++QK L+DDFF++A +A+AILFLAF+S+AT+LLLSPFNRI+P
Sbjct: 121 VV--ETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRIEP 180

Query: 181 TP 183
            P
Sbjct: 181 IP 180

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BLAST of CsaV3_1G004870 vs. TAIR10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 81.6 bits (200), Expect = 6.3e-16
Identity = 51/164 (31.10%), Postives = 92/164 (56.10%), Query Frame = 0


Query: 19  ICLLIALVVIATDKLSLI---NGFKATFNDIHGYRYVLSVAVIGLAHTILQLGFSIYHVL 78
           + L+IAL++++T+ ++++   +  K  F D++ YRY+LS AVIGL + ++QL F+I    
Sbjct: 26  VFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYAVIQLFFTISEFA 85

Query: 79  TQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDSRTKKEFGDNDYGFFS 138
           T     +N   Q+++Y D++I++++ATG  AGF V+++LK                 F +
Sbjct: 86  TGVKNPFN--YQLDFYGDKLISYLVATGSAAGFGVTKDLKD---------------TFLA 145

Query: 139 PAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIK 180
               +    +D FF+K   + ++L  AFI +A L + S F   K
Sbjct: 146 LVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

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BLAST of CsaV3_1G004870 vs. TAIR10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13
Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 0


Query: 40  KATFNDIHGYRYVLSVAVIGLAHTILQLGFSIYHVLT-QNIPFWNGLPQVNYYADQVITW 99
           K  FND++ YRY+LS AVIGL + ++QL  +I    T +  P      Q ++Y D+VI++
Sbjct: 50  KLPFNDVYAYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPL---TYQFDFYGDKVISY 109

Query: 100 MLATGVGAGFAVSRELK-SYVDSRTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATA 159
           +LATG  AGF VS++LK +Y+      EF   D              +D FF+K   + +
Sbjct: 110 LLATGSAAGFGVSKDLKDTYI---ALIEFDSTD-------------PVDKFFSKGYASAS 169

Query: 160 ILFLAFISMATLLLLSPFNRIKPTPLP 185
           +L  AF+S+A L + S    +   P+P
Sbjct: 170 LLLFAFVSLAVLSVFSSL-ALSKRPVP 176

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BLAST of CsaV3_1G004870 vs. Swiss-Prot
Match: sp|Q56X75|CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.1e-14
Identity = 51/164 (31.10%), Postives = 92/164 (56.10%), Query Frame = 0


Query: 19  ICLLIALVVIATDKLSLI---NGFKATFNDIHGYRYVLSVAVIGLAHTILQLGFSIYHVL 78
           + L+IAL++++T+ ++++   +  K  F D++ YRY+LS AVIGL + ++QL F+I    
Sbjct: 26  VFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYAVIQLFFTISEFA 85

Query: 79  TQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDSRTKKEFGDNDYGFFS 138
           T     +N   Q+++Y D++I++++ATG  AGF V+++LK                 F +
Sbjct: 86  TGVKNPFN--YQLDFYGDKLISYLVATGSAAGFGVTKDLKD---------------TFLA 145

Query: 139 PAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIK 180
               +    +D FF+K   + ++L  AFI +A L + S F   K
Sbjct: 146 LVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

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BLAST of CsaV3_1G004870 vs. Swiss-Prot
Match: sp|B9SXY8|CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.9e-14
Identity = 53/167 (31.74%), Postives = 91/167 (54.49%), Query Frame = 0


Query: 13  LRIFVFICLLIALVVIATDKLSL---INGFKATFNDIHGYRYVLSVAVIGLAHTILQLGF 72
           LRI  FI L+ +LV++ T+  +L   +   K  F D++ YRY+L+  VIGLA+T+LQ+ F
Sbjct: 17  LRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGLAYTVLQIAF 76

Query: 73  SIYHVLTQN-IPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDSRTKKEFGD 132
           ++Y+V T N +   +G    +++ D+VI+++L TG  AGFA ++++K           G 
Sbjct: 77  TLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVFS-------GS 136

Query: 133 NDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPF 176
            D+              D F NK   + ++L + F+  A L + S +
Sbjct: 137 GDF--------------DAFINKGYASASLLLIGFVCTAVLSVFSSY 162

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BLAST of CsaV3_1G004870 vs. Swiss-Prot
Match: sp|D7LD59|CSPLL_ARALL (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-14
Identity = 51/165 (30.91%), Postives = 93/165 (56.36%), Query Frame = 0


Query: 13  LRIFVFICLLIALVVIATDKLSLI---NGFKATFNDIHGYRYVLSVAVIGLAHTILQLGF 72
           LR+   + L+IAL++++T+ ++++   +  K  F D++ YRY+LS AVIGL + ++QL F
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLLYAVIQLFF 79

Query: 73  SIYHVLT-QNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDSRTKKEFGD 132
           +I    T    PF     Q+++Y D++I++++ATG  AGF VS++LK             
Sbjct: 80  TISEFATGMKNPF---NYQLDFYGDKLISYLVATGSAAGFGVSKDLKD------------ 139

Query: 133 NDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLS 174
               F +    +    +D FF++   + ++L  +FI +A L + S
Sbjct: 140 ---AFIALVALDSTDPVDKFFSRGYASASLLLFSFICLAVLSVFS 166

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BLAST of CsaV3_1G004870 vs. Swiss-Prot
Match: sp|D7LD60|CSPLK_ARALL (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.1e-13
Identity = 49/135 (36.30%), Postives = 73/135 (54.07%), Query Frame = 0


Query: 40  KATFNDIHGYRYVLSVAVIGLAHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWM 99
           K  FND++ YRY+LS AVIGL + ++QL  +I    T      N   Q N+Y D++I+++
Sbjct: 50  KMRFNDVYAYRYMLSAAVIGLLYAVVQLFLTISQFATGTTHPLN--YQFNFYGDKIISYL 109

Query: 100 LATGVGAGFAVSRELKSYVDSRTKKEFGDNDYGFFSPAIE-EQKSLIDDFFNKATVATAI 159
           LATG  AGF VS++LK                  F   IE +    +D FF+K   + ++
Sbjct: 110 LATGSAAGFGVSKDLKE----------------TFLALIEFDSTDPVDKFFSKGYASASL 166

Query: 160 LFLAFISMATLLLLS 174
           L  AF+S+A L + S
Sbjct: 170 LLFAFVSLAVLSVFS 166

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BLAST of CsaV3_1G004870 vs. Swiss-Prot
Match: sp|A1XGB4|PIMP1_CAPAN (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 43/121 (35.54%), Postives = 71/121 (58.68%), Query Frame = 0


Query: 9   IGIGLRIFVFICLLIALVVIATDK--LSLING-FKATFNDIHGYRYVLSVAVIGLAHTIL 68
           + + +RI   ICLLI+ +VIAT+   +S + G  K  F D + YRY+++  +IG+A+T+L
Sbjct: 13  VSLIVRILTLICLLISFIVIATNNQTVSTVAGDVKIKFKDFYAYRYLIATVIIGMAYTLL 72

Query: 69  QLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDSRTKKE 127
           Q+ FSI  + T N     G    ++Y D+ I++ L TG  A F ++++LK    S    +
Sbjct: 73  QIAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDLKQLEGSDNYSK 132

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BLAST of CsaV3_1G004870 vs. TrEMBL
Match: tr|A0A0A0LSG6|A0A0A0LSG6_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G029610 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 2.7e-98
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60
           MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120
           AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180
           RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 TPLPAQDPE 190
           TPLPAQDPE
Sbjct: 181 TPLPAQDPE 189

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BLAST of CsaV3_1G004870 vs. TrEMBL
Match: tr|A0A1S3BYF7|A0A1S3BYF7_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 2.6e-85
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60
           MDPKVL LIGIG+RIFVFICLLIALVVIATDKLSLINGFKATFND+HGYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120
           AHTILQLGFSIYHVLTQNI FWNGLPQVNYYADQVITW+LAT VGAGFAVS ELKSYV+S
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180
           R  KEFGD  YGFFS  ++EQKSLIDDFF+KA +ATAILFLAFISMATLLLLSPFNRIKP
Sbjct: 121 RINKEFGDY-YGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 TPLPAQDPE 190
           TPLP QDPE
Sbjct: 181 TPLPTQDPE 188

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BLAST of CsaV3_1G004870 vs. TrEMBL
Match: tr|A0A200QE22|A0A200QE22_9MAGN (CASP-like protein OS=Macleaya cordata OX=56857 GN=BVC80_1613g8 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 6.0e-21
Identity = 65/170 (38.24%), Postives = 101/170 (59.41%), Query Frame = 0


Query: 13  LRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGLAHTILQLGFSIY 72
           LRI     L  ++VV+AT+  +L +G K +F DI  YRYV++  ++G  + +LQ+ F++Y
Sbjct: 14  LRILALGLLAGSIVVLATNNFTLSDGTKTSFKDIIAYRYVIATGLLGFLYILLQIPFALY 73

Query: 73  HVLTQNIPFWNG-LPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDSRTKKEFGDNDY 132
           HV  +     NG LPQ ++Y D++I+ +LATGVG GF V+ E K  VD     +F  N  
Sbjct: 74  HVCAEKRLIRNGCLPQFDFYGDKIISLLLATGVGVGFGVTFEFKKLVD-----QFFQN-- 133

Query: 133 GFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKPT 182
               P ++E KS  + F +K  ++T +LFL F+ +A L +L+  NR   T
Sbjct: 134 -INVPGVDESKSKTEKFLDKGNLSTGLLFLGFLCVAVLSVLTSINRTATT 175

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BLAST of CsaV3_1G004870 vs. TrEMBL
Match: tr|B9I4V9|B9I4V9_POPTR (CASP-like protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G040100v3 PE=3 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 6.0e-21
Identity = 73/189 (38.62%), Postives = 111/189 (58.73%), Query Frame = 0


Query: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLI---NGFKATFNDIHGYRYVLSVAV 60
           M  + +A+  + LRIF  + L+  +V+  T+         G K TF D+  YR+VLS AV
Sbjct: 1   MGSRAIAISTLVLRIFTLLALVACVVLFITNTFRYAMFDAGSKVTFKDLTTYRFVLSTAV 60

Query: 61  IGLAHTILQLGFSIYHVLTQ-NIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKS 120
           IG A+T+LQL F++Y+ LT+  +   + LP+++ Y D++I ++LA+GVGAGFAVS E+KS
Sbjct: 61  IGAAYTLLQLPFALYYALTEKRLIKVDILPELDLYGDKIIAFLLASGVGAGFAVSVEIKS 120

Query: 121 YV----DSRTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLL 180
            +    D+     F D          E+ K+L D+F NK  +AT+ L   F+ MA + +L
Sbjct: 121 LLKDLFDAFALAGFQDT---------EDSKALYDNFINKGIIATSALAFGFVCMALVSVL 180

Query: 181 SPFNRIKPT 182
           S  NR K T
Sbjct: 181 SSVNRTKTT 180

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BLAST of CsaV3_1G004870 vs. TrEMBL
Match: tr|A0A218VRE1|A0A218VRE1_PUNGR (CASP-like protein OS=Punica granatum OX=22663 GN=CDL15_Pgr019954 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.7e-20
Identity = 64/169 (37.87%), Postives = 102/169 (60.36%), Query Frame = 0


Query: 13  LRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGLAHTILQLGFSIY 72
           LR+   + L  ++ ++ T+K +  NG K TF DI  YRYVL+ A  G+A+ +LQL F++Y
Sbjct: 14  LRVLATMFLAASMALMITNKYTDSNGTKTTFKDIIAYRYVLATAASGIAYGLLQLPFAVY 73

Query: 73  HVLTQ-NIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDSRTKKEFGDNDY 132
           +  T+  +   + +P+ ++Y D++I++ LA+GVGAGFAVS ELK YVD           +
Sbjct: 74  YAYTEKRLLLKDYMPEFDFYGDKIISYFLASGVGAGFAVSFELKRYVDR----------F 133

Query: 133 GFFSPAI---EEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNR 178
            FF   +   EE KS  D F ++ ++AT ++   F+ MA + +LS  NR
Sbjct: 134 FFFRGLLQLAEEDKSKADKFLDRGSIATGLIAGGFLCMAVVSVLSSMNR 172

The following BLAST results are available for this feature:

BLAST of CsaV3_1G004870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649480.1	4.1e-98	100.00	PREDICTED: CASP-like protein 4D2 [Cucumis sativus] >KGN63934.1 hypothetical prot...	[more]
XP_008454028.1	4.0e-85	88.89	PREDICTED: CASP-like protein 4D1 [Cucumis melo]	[more]
XP_022137163.1	5.1e-72	75.66	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_023524544.1	1.6e-57	65.93	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022949251.1	2.3e-56	65.38	CASP-like protein 4D1 [Cucurbita moschata]	[more]

BLAST of CsaV3_1G004870 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39518.1	6.3e-16	31.10	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	1.3e-13	35.37	Uncharacterised protein family (UPF0497)	[more]

BLAST of CsaV3_1G004870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q56X75\|CSPLB_ARATH	1.1e-14	31.10	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
sp\|B9SXY8\|CSPLE_RICCO	1.9e-14	31.74	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
sp\|D7LD59\|CSPLL_ARALL	3.3e-14	30.91	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
sp\|D7LD60\|CSPLK_ARALL	2.1e-13	36.30	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
sp\|A1XGB4\|PIMP1_CAPAN	1.1e-12	35.54	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]

BLAST of CsaV3_1G004870 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LSG6\|A0A0A0LSG6_CUCSA	2.7e-98	100.00	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G029610 PE=3 SV=1	[more]
tr\|A0A1S3BYF7\|A0A1S3BYF7_CUCME	2.6e-85	88.89	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1	[more]
tr\|A0A200QE22\|A0A200QE22_9MAGN	6.0e-21	38.24	CASP-like protein OS=Macleaya cordata OX=56857 GN=BVC80_1613g8 PE=3 SV=1	[more]
tr\|B9I4V9\|B9I4V9_POPTR	6.0e-21	38.62	CASP-like protein OS=Populus trichocarpa OX=3694 GN=POPTR_012G040100v3 PE=3 SV=1	[more]
tr\|A0A218VRE1\|A0A218VRE1_PUNGR	8.7e-20	37.87	CASP-like protein OS=Punica granatum OX=22663 GN=CDL15_Pgr019954 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G004870.1	CsaV3_1G004870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..164 e-value: 3.2E-17 score: 62.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..213
None	No IPR available	PANTHER	PTHR33573:SF5	SUBFAMILY NOT NAMED	coord: 4..177
None	No IPR available	PANTHER	PTHR33573	FAMILY NOT NAMED	coord: 4..177

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G004870	CSPI01G04920	Wild cucumber (PI 183967)	cpicucB001
CsaV3_1G004870	Cucsa.112080	Cucumber (Gy14) v1	cgycucB143
CsaV3_1G004870	CmoCh01G007840	Cucurbita moschata (Rifu)	cmocucB0506
CsaV3_1G004870	Cp4.1LG02g09980	Cucurbita pepo (Zucchini)	cpecucB0660
CsaV3_1G004870	Carg06992	Silver-seed gourd	carcucB0552
CsaV3_1G004870	Cla018660	Watermelon (97103) v1	cucwmB068
CsaV3_1G004870	MELO3C001930	Melon (DHL92) v3.5.1	cucmeB018
CsaV3_1G004870	ClCG04G012730	Watermelon (Charleston Gray)	cucwcgB061
CsaV3_1G004870	Lsi02G000160	Bottle gourd (USVL1VR-Ls)	cuclsiB037
CsaV3_1G004870	MELO3C001930.2	Melon (DHL92) v3.6.1	cucmedB016
CsaV3_1G004870	Cla97C04G079780	Watermelon (97103) v2	cucwmbB052
CsaV3_1G004870	Bhi08G001597	Wax gourd	cucwgoB059

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_1G004870	Silver-seed gourd	carcucB0555
CsaV3_1G004870	Cucumber (Gy14) v2	cgybcucB002
CsaV3_1G004870	Cucurbita maxima (Rimu)	cmacucB0247
CsaV3_1G004870	Cucurbita maxima (Rimu)	cmacucB0513
CsaV3_1G004870	Cucurbita maxima (Rimu)	cmacucB0519
CsaV3_1G004870	Cucurbita moschata (Rifu)	cmocucB0233
CsaV3_1G004870	Cucurbita moschata (Rifu)	cmocucB0501
CsaV3_1G004870	Cucurbita pepo (Zucchini)	cpecucB0665