Cp4.1LG02g09980 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g09980
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	CASP-like protein
Location	Cp4.1LG02 : 10044201 .. 10046010 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGTATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCTTCATCGCCTTGGTCGTAATTGCCACCGACAAACTGGTCCTCATTGATGGCTCTGAATCAACCTTCAATGACATTCAAGGATACAGGTTCTCTGTTCGGCCTATTTCTAATATCCATTCTAATTCATGACCTAAAATTTCTTCTTCATGCAGGTACGTCTAATTCATGACCTAAAATTTCTTCTTCATGCAGGTACGTTTTGTCCGTGGCAATCATAGGGTTGGTCCATACAATACTACAACTGGGTTTCTCTATATACTATGCGGTTACCAAAAACATACCATTTTGGAACGGACTCCCTCAATTCAATTACTACACTGACCAGGTTTGTGTGATCACCACTTTACTATCTTCTTCGTTGATTTCCTTAACGAAAATTATCGAGAATATTGTTCTTTCAAACTTAACCTCAGCATCATGGTGTTTCAAGTCATCATCACATTAATTTTTTGTCCAACGAATTTTTATCCAAAGTTAATCTTGAAAGCGTTTTTCAAAGATAAAATATCATTAATTTTGAAAGAATAAGGATAATTTTTAAACAAGAGGACGCCAGGTGTCACAATCGCACTCTTGATGGCAGCGGACTTGCGATTGTGCGACACTCACTTTCCAACAACAAGTGAGTTAAGCCAATTCATTCTTTCATCGTCTACGGCCAAGCGATGTATGCTCGAGACTCTGGCCTCGGTTTAAGAAGAAGGTTTTAGAGAGCGAGGGTAGAGAGATTTTCAAAATAGAGATTTTGAAAGAGACGTTATATATGCAAGCAAAAGAGTAACAACAACAACTCACAGTATATAACTATTGGTAGGGAGACGTCGACAACTAGTCATATCTCCTATAGTACATTTTGAGGCATTTCATGTCTAGCAAGCCTAGAAATACGTCCTACTTCCTGGAAATACGTCCTACTTCCTGGAAATACGTCCTACTTCCTGGAAATACGTCCTACTTCCTGGAAATACGTCCTACTTCCTAGAAATACGTCGGGGGGTTTGGCTTATGATGGGCATGCGGCATGGGCAACATGCCTTAGACGAGCATAACCGTGGCATCGGACTCCAAGGGGTGGATTGTGGAATCCCACCTCGTTGGAGAGGGAAACGAAACATTTCCTATAAGTGTGAAAATCTCTAACTAGTACATGCGTTTTAAAACTATAAAGCTGGCGACGATATGTACCCAGCAATGTCTACTTAGGATCATTTATTTTAAAACCGAGAAACCAAATAGAAATAACTTAACCTAATTTGTTGAAATCTCGCTGATATCCAAATGGGAAAGGCAGGTGATAAGTTGGGTGTTGGTATCGGCGGCGGGGGCGGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATCAAGTTGTCGAGAACGGCATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCACCATTCAATCGGCTCAAACCTATTCCCACCACCCAAGATCTTGAGGCCCATTCTCCCCAGGCCCAAAAGTGCAAGGCCCAATCTCCACAGGCCCACACAGTCGAGGCCCAATCCCCACAGGCCCATACAGTCGAGGCCCAATCTCCACGGGCTCAACAGGTTGATGCCCAATCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

mRNA sequence

ATGGATCGTATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCTTCATCGCCTTGGTCGTAATTGCCACCGACAAACTGGTCCTCATTGATGGCTCTGAATCAACCTTCAATGACATTCAAGGATACAGGTACGTTTTGTCCGTGGCAATCATAGGGTTGGTCCATACAATACTACAACTGGGTTTCTCTATATACTATGCGGTTACCAAAAACATACCATTTTGGAACGGACTCCCTCAATTCAATTACTACACTGACCAGGTGATAAGTTGGGTGTTGGTATCGGCGGCGGGGGCGGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATCAAGTTGTCGAGAACGGCATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCACCATTCAATCGGCTCAAACCTATTCCCACCACCCAAGATCTTGAGGCCCATTCTCCCCAGGCCCAAAAGTGCAAGGCCCAATCTCCACAGGCCCACACAGTCGAGGCCCAATCCCCACAGGCCCATACAGTCGAGGCCCAATCTCCACGGGCTCAACAGGTTGATGCCCAATCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

Coding sequence (CDS)

ATGGATCGTATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCTTCATCGCCTTGGTCGTAATTGCCACCGACAAACTGGTCCTCATTGATGGCTCTGAATCAACCTTCAATGACATTCAAGGATACAGGTACGTTTTGTCCGTGGCAATCATAGGGTTGGTCCATACAATACTACAACTGGGTTTCTCTATATACTATGCGGTTACCAAAAACATACCATTTTGGAACGGACTCCCTCAATTCAATTACTACACTGACCAGGTGATAAGTTGGGTGTTGGTATCGGCGGCGGGGGCGGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATCAAGTTGTCGAGAACGGCATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCACCATTCAATCGGCTCAAACCTATTCCCACCACCCAAGATCTTGAGGCCCATTCTCCCCAGGCCCAAAAGTGCAAGGCCCAATCTCCACAGGCCCACACAGTCGAGGCCCAATCCCCACAGGCCCATACAGTCGAGGCCCAATCTCCACGGGCTCAACAGGTTGATGCCCAATCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

Protein sequence

MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIPTTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQAHTVEAQSPRAQQVDAQSPQAQKVEAQPTETSST

Homology

[Close]

BLAST of Cp4.1LG02g09980 vs. Swiss-Prot
Match: CSPLC_ARATH (CASP-like protein 4D1 OS=Arabidopsis thaliana GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.0e-13
Identity = 59/175 (33.71%), Postives = 94/175 (53.71%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+     L I +V+I+T+ + L   S S    FND+  YRY+LS A+IGLV+ ++QL  
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFL 79

Query: 73  SI-YYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A  K  P      QF++Y D+VIS++L + + AG  VS D K     ++E     
Sbjct: 80  TISQFATGKTHPL---TYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIE----- 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLK-PIPTT 183
               F + D     VD FF +   ++++L  AF+S+A + + S     K P+P +
Sbjct: 140 ----FDSTDP----VDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRPVPVS 178

[Close]

BLAST of Cp4.1LG02g09980 vs. Swiss-Prot
Match: CSPLK_ARALL (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.5e-12
Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+     L I +V+I+T+ + L   S S    FND+  YRY+LS A+IGL++ ++QL  
Sbjct: 20  LRVLTAAFLVITVVLISTNTVTLEVSSTSIKMRFNDVYAYRYMLSAAVIGLLYAVVQLFL 79

Query: 73  SIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGDC 132
           +I    T      N   QFN+Y D++IS++L + + AG  VS D K     ++E      
Sbjct: 80  TISQFATGTTHPLN--YQFNFYGDKIISYLLATGSAAGFGVSKDLKETFLALIE------ 139

Query: 133 GVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLS 172
              F + D     VD FF +   ++++L  AF+S+A + + S
Sbjct: 140 ---FDSTDP----VDKFFSKGYASASLLLFAFVSLAVLSVFS 166

[Close]

BLAST of Cp4.1LG02g09980 vs. Swiss-Prot
Match: CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-12
Identity = 53/165 (32.12%), Postives = 89/165 (53.94%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVL-IDGSEST--FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LRI  FI L  +LV++ T+   L +D  E    F D+  YRY+L+  +IGL +T+LQ+ F
Sbjct: 17  LRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGLAYTVLQIAF 76

Query: 73  SIYYAVTKN-IPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           ++YY  T N +   +G   F+++ D+VIS++LV+ A AG A + D K      V +G GD
Sbjct: 77  TLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIK-----PVFSGSGD 136

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPF 174
                          D F ++   ++++L + F+  A + + S +
Sbjct: 137 --------------FDAFINKGYASASLLLIGFVCTAVLSVFSSY 162

[Close]

BLAST of Cp4.1LG02g09980 vs. Swiss-Prot
Match: CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.9e-12
Identity = 51/169 (30.18%), Postives = 90/169 (53.25%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+   + L IAL++++T+ + ++    +    F D+  YRY+LS A+IGLV+ ++QL F
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYAVIQLFF 79

Query: 73  SI-YYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A     PF     Q ++Y D++IS+++ + + AG  V+ D K            D
Sbjct: 80  TISEFATGVKNPF---NYQLDFYGDKLISYLVATGSAAGFGVTKDLK------------D 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLK 178
             +   ALD     VD FF +   ++++L  AF+ +A + + S F   K
Sbjct: 140 TFLALVALDSTD-PVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

[Close]

BLAST of Cp4.1LG02g09980 vs. Swiss-Prot
Match: CSPLL_ARALL (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+   + L IAL++++T+ + ++    +    F D+  YRY+LS A+IGL++ ++QL F
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLLYAVIQLFF 79

Query: 73  SI-YYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A     PF     Q ++Y D++IS+++ + + AG  VS D K            D
Sbjct: 80  TISEFATGMKNPF---NYQLDFYGDKLISYLVATGSAAGFGVSKDLK------------D 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLS 172
             +   ALD     VD FF R   ++++L  +F+ +A + + S
Sbjct: 140 AFIALVALDSTD-PVDKFFSRGYASASLLLFSFICLAVLSVFS 166

[Close]

BLAST of Cp4.1LG02g09980 vs. TrEMBL
Match: A0A0A0LSG6_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_1G029610 PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.3e-62
Identity = 134/213 (62.91%), Postives = 163/213 (76.53%), Query Frame = 1


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD  V+A IGIGLRIF FICL IALVVIATDKL LI+G ++TFNDI GYRYVLSVA+IGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
            HTILQLGFSIY+ +T+NIPFWNGLPQ NYY DQVI+W+L +  GAG AVS + K  ++ 
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 VV--ENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKP 180
               E G  D G    A+++QK L+DDFF++A +A+AILFLAF+S+AT+LLLSPFNR+KP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 IPTTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQ 212
            P    L A  P+AQK +AQS Q    EAQS +
Sbjct: 181 TP----LPAQDPEAQKSEAQSSQVQHTEAQSSE 209

[Close]

BLAST of Cp4.1LG02g09980 vs. TrEMBL
Match: M5WL71_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa024180mg PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 9.2e-20
Identity = 63/166 (37.95%), Postives = 101/166 (60.84%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIY 72
           LRI   + L  ++VV+ TD   L DG++  F DI  YR+VL+ A IG  +T++QL F IY
Sbjct: 13  LRIVTLLALVASVVVLVTDHFTLQDGTQQHFQDIHAYRFVLATAAIGAAYTLIQLPFDIY 72

Query: 73  YAVTKNIPFWNG-LPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ--VVENGIGDC 132
           YA  +     +G +P+F++Y D+++S VL S  GAG  V  + K +LN   ++   +G+ 
Sbjct: 73  YACAQKRLIRHGCMPEFDFYADKLVSLVLASGVGAGFGVGFEFKRVLNDLFLLLLALGED 132

Query: 133 GVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNR 176
            V   +LD+++   + FF+RANIA+ +L +  + +A I +LS  NR
Sbjct: 133 PV---SLDEEQSKDNAFFNRANIATGVLLVGAICMAVISVLSSINR 175

[Close]

BLAST of Cp4.1LG02g09980 vs. TrEMBL
Match: B9I4V9_POPTR (CASP-like protein OS=Populus trichocarpa GN=POPTR_0012s03720g PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-16
Identity = 65/181 (35.91%), Postives = 104/181 (57.46%), Query Frame = 1


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATD--KLVLID-GSESTFNDIQGYRYVLSVAI 60
           M    +A   + LRIF  + L   +V+  T+  +  + D GS+ TF D+  YR+VLS A+
Sbjct: 1   MGSRAIAISTLVLRIFTLLALVACVVLFITNTFRYAMFDAGSKVTFKDLTTYRFVLSTAV 60

Query: 61  IGLVHTILQLGFSIYYAVT-KNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKM 120
           IG  +T+LQL F++YYA+T K +   + LP+ + Y D++I+++L S  GAG AVS + K 
Sbjct: 61  IGAAYTLLQLPFALYYALTEKRLIKVDILPELDLYGDKIIAFLLASGVGAGFAVSVEIKS 120

Query: 121 LLNQVVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRL 178
           LL  + +      G  F   +  K L D+F ++  IA++ L   F+ +A + +LS  NR 
Sbjct: 121 LLKDLFD-AFALAG--FQDTEDSKALYDNFINKGIIATSALAFGFVCMALVSVLSSVNRT 178

[Close]

BLAST of Cp4.1LG02g09980 vs. TrEMBL
Match: A5B0Q9_VITVI (CASP-like protein OS=Vitis vinifera GN=VITISV_001156 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.8e-16
Identity = 58/163 (35.58%), Postives = 98/163 (60.12%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIY 72
           LRI   + L  ++VV+AT+     DG++++F D+  YRYV +   +G ++T+ Q+ F++Y
Sbjct: 13  LRILTLLLLAASVVVMATNNFKFSDGTKTSFTDVIAYRYVAATGAVGFLYTVAQIPFAVY 72

Query: 73  YAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGDCGVL 132
           +A T+        P+F++Y D+VIS +L +  GAG AV+ + K  LN  V+ G+ D  + 
Sbjct: 73  HACTEKRLL---RPEFDFYGDKVISLLLGTGVGAGFAVTFEFKRNLNDFVQ-GVED--LS 132

Query: 133 FAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNR 176
              L + K   + F DRA IA+ +LFL F+ +A + +LS  +R
Sbjct: 133 GQDLSEFKSKTEKFLDRAIIATGLLFLGFICMAILSVLSSLSR 169

[Close]

BLAST of Cp4.1LG02g09980 vs. TrEMBL
Match: A0A118K3Z1_CYNCS (CASP-like protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_014910 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.2e-16
Identity = 53/150 (35.33%), Postives = 92/150 (61.33%), Query Frame = 1


Query: 36  IDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIYYAVT-KNIPFWNGLPQFNYYTDQ 95
           IDGS++++ D++ YR+V + A+IG+ + ++Q+ F++YYA T K +   + LP+F++Y D+
Sbjct: 8   IDGSKTSWKDLKTYRFVFATAVIGVFYLLIQIPFAVYYACTGKRLIRHSCLPEFDFYADK 67

Query: 96  VISWVLVSAAGAGLAVSADRKMLLNQVVE---------NGIGDCGVLFAALDQQKWLVDD 155
           ++S++L SA GAG+A S + K++++ VV          N   D G+    L + K   D 
Sbjct: 68  LVSYLLASAVGAGIAASMELKIIIDDVVALIAFIFEALNSNVDLGI---NLYEFKSKTDK 127

Query: 156 FFDRANIASAILFLAFLSIATILLLSPFNR 176
           F DR  IA+ +L + F  +  I +LS  NR
Sbjct: 128 FLDRGIIATILLAVGFGFMVVISILSSLNR 154

[Close]

BLAST of Cp4.1LG02g09980 vs. TAIR10
Match: AT2G39530.1 (AT2G39530.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 75.9 bits (185), Expect = 3.9e-14
Identity = 59/175 (33.71%), Postives = 94/175 (53.71%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+     L I +V+I+T+ + L   S S    FND+  YRY+LS A+IGLV+ ++QL  
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFL 79

Query: 73  SI-YYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A  K  P      QF++Y D+VIS++L + + AG  VS D K     ++E     
Sbjct: 80  TISQFATGKTHPL---TYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIE----- 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLK-PIPTT 183
               F + D     VD FF +   ++++L  AF+S+A + + S     K P+P +
Sbjct: 140 ----FDSTDP----VDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRPVPVS 178

[Close]

BLAST of Cp4.1LG02g09980 vs. TAIR10
Match: AT2G39518.1 (AT2G39518.1 Uncharacterised protein family (UPF0497))

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-13
Identity = 51/169 (30.18%), Postives = 90/169 (53.25%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+   + L IAL++++T+ + ++    +    F D+  YRY+LS A+IGLV+ ++QL F
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYAVIQLFF 79

Query: 73  SI-YYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A     PF     Q ++Y D++IS+++ + + AG  V+ D K            D
Sbjct: 80  TISEFATGVKNPF---NYQLDFYGDKLISYLVATGSAAGFGVTKDLK------------D 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLK 178
             +   ALD     VD FF +   ++++L  AF+ +A + + S F   K
Sbjct: 140 TFLALVALDSTD-PVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

[Close]

BLAST of Cp4.1LG02g09980 vs. NCBI nr
Match: gi|659066253|ref|XP_008454028.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 250.4 bits (638), Expect = 3.3e-63
Identity = 136/212 (64.15%), Postives = 162/212 (76.42%), Query Frame = 1


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD  V+  IGIG+RIF FICL IALVVIATDKL LI+G ++TFND+ GYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
            HTILQLGFSIY+ +T+NI FWNGLPQ NYY DQVI+WVL +A GAG AVS + K  +N 
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 VVENGIGD-CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPI 180
            +    GD  G   A +D+QK L+DDFFD+ANIA+AILFLAF+S+AT+LLLSPFNR+KP 
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 PTTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQ 212
           P    L    P+AQK +AQS QA   EAQS +
Sbjct: 181 P----LPTQDPEAQKLEAQSSQAQQTEAQSSE 208

[Close]

BLAST of Cp4.1LG02g09980 vs. NCBI nr
Match: gi|778656667|ref|XP_011649480.1| (PREDICTED: CASP-like protein 4D2 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 4.8e-62
Identity = 134/213 (62.91%), Postives = 163/213 (76.53%), Query Frame = 1


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD  V+A IGIGLRIF FICL IALVVIATDKL LI+G ++TFNDI GYRYVLSVA+IGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120
            HTILQLGFSIY+ +T+NIPFWNGLPQ NYY DQVI+W+L +  GAG AVS + K  ++ 
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 VV--ENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKP 180
               E G  D G    A+++QK L+DDFF++A +A+AILFLAF+S+AT+LLLSPFNR+KP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 IPTTQDLEAHSPQAQKCKAQSPQAHTVEAQSPQ 212
            P    L A  P+AQK +AQS Q    EAQS +
Sbjct: 181 TP----LPAQDPEAQKSEAQSSQVQHTEAQSSE 209

[Close]

BLAST of Cp4.1LG02g09980 vs. NCBI nr
Match: gi|595844705|ref|XP_007208789.1| (hypothetical protein PRUPE_ppa024180mg [Prunus persica])

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-19
Identity = 63/166 (37.95%), Postives = 101/166 (60.84%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIY 72
           LRI   + L  ++VV+ TD   L DG++  F DI  YR+VL+ A IG  +T++QL F IY
Sbjct: 13  LRIVTLLALVASVVVLVTDHFTLQDGTQQHFQDIHAYRFVLATAAIGAAYTLIQLPFDIY 72

Query: 73  YAVTKNIPFWNG-LPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ--VVENGIGDC 132
           YA  +     +G +P+F++Y D+++S VL S  GAG  V  + K +LN   ++   +G+ 
Sbjct: 73  YACAQKRLIRHGCMPEFDFYADKLVSLVLASGVGAGFGVGFEFKRVLNDLFLLLLALGED 132

Query: 133 GVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNR 176
            V   +LD+++   + FF+RANIA+ +L +  + +A I +LS  NR
Sbjct: 133 PV---SLDEEQSKDNAFFNRANIATGVLLVGAICMAVISVLSSINR 175

[Close]

BLAST of Cp4.1LG02g09980 vs. NCBI nr
Match: gi|769805653|ref|XP_011625256.1| (PREDICTED: CASP-like protein 4D1 [Amborella trichopoda])

HSP 1 Score: 103.2 bits (256), Expect = 6.5e-19
Identity = 62/175 (35.43%), Postives = 103/175 (58.86%), Query Frame = 1


Query: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           M    V F  I LRI  FI L I+++++ TDK+   D SE TF DI+ YRY+LS ++IG 
Sbjct: 1   MATRAVRFATILLRILTFILLAISVIILVTDKVKFSDKSEVTFKDIKAYRYLLSASVIGC 60

Query: 61  VHTILQLGFSIYYAVTKNIPFWN-GLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLN 120
            ++++Q+ F++Y+  T      N  LP F++Y D++I+  L SA G G  V+ + K LL+
Sbjct: 61  AYSLIQIPFAVYWVSTSKRLIRNICLPYFDFYGDKIIALFLASAVGVGFGVTVELKKLLD 120

Query: 121 QVVENGIGDCGVLFAALDQ---QKWLVDDFFDRANIASAILFLAFLSIATILLLS 172
             +++      + F   DQ   +   +D FFD+ N+++  + LAF+ +A + +LS
Sbjct: 121 GFIDS------LRFLGEDQFASEASKLDKFFDKGNVSTGFILLAFICMAILSILS 169

[Close]

BLAST of Cp4.1LG02g09980 vs. NCBI nr
Match: gi|731427261|ref|XP_010663913.1| (PREDICTED: CASP-like protein 4D1 [Vitis vinifera])

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-17
Identity = 59/163 (36.20%), Postives = 99/163 (60.74%), Query Frame = 1


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIY 72
           LRI   + L  ++VV+AT+     DG++++F D+  YRYV +   +G ++T+ Q+ F++Y
Sbjct: 13  LRILTLLLLAASVVVMATNNFKFSDGTKTSFTDVIAYRYVAATGAVGFLYTVAQIPFAVY 72

Query: 73  YAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQVVENGIGDCGVL 132
           +A T+  P     P+F++Y D+VIS +L +  GAG AV+ + K  LN  V+ G+ D  + 
Sbjct: 73  HACTEKRPL---RPEFDFYGDKVISLLLGTGVGAGFAVTFEFKRNLNDFVQ-GVED--LS 132

Query: 133 FAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNR 176
              L + K   + F DRA IA+ +LFL F+ +A + +LS  +R
Sbjct: 133 GQDLSEFKSKTEKFLDRATIATGLLFLGFICMAILSVLSSLSR 169

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g09980 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CSPLC_ARATH	7.0e-13	33.71	CASP-like protein 4D1 OS=Arabidopsis thaliana GN=At2g39530 PE=2 SV=1	[more]
CSPLK_ARALL	3.5e-12	33.33	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903205 P...	[more]
CSPLE_RICCO	4.5e-12	32.12	CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1	[more]
CSPLB_ARATH	5.9e-12	30.18	CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1	[more]
CSPLL_ARALL	1.3e-11	30.06	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903204 P...	[more]

BLAST of Cp4.1LG02g09980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSG6_CUCSA	3.3e-62	62.91	CASP-like protein OS=Cucumis sativus GN=Csa_1G029610 PE=3 SV=1	[more]
M5WL71_PRUPE	9.2e-20	37.95	CASP-like protein OS=Prunus persica GN=PRUPE_ppa024180mg PE=3 SV=1	[more]
B9I4V9_POPTR	1.6e-16	35.91	CASP-like protein OS=Populus trichocarpa GN=POPTR_0012s03720g PE=3 SV=1	[more]
A5B0Q9_VITVI	2.8e-16	35.58	CASP-like protein OS=Vitis vinifera GN=VITISV_001156 PE=3 SV=1	[more]
A0A118K3Z1_CYNCS	6.2e-16	35.33	CASP-like protein (Fragment) OS=Cynara cardunculus var. scolymus GN=Ccrd_014910 ...	[more]

BLAST of Cp4.1LG02g09980 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39530.1	3.9e-14	33.71	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	3.3e-13	30.18	Uncharacterised protein family (UPF0497)	[more]

BLAST of Cp4.1LG02g09980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659066253\|ref\|XP_008454028.1\|	3.3e-63	64.15	PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo]	[more]
gi\|778656667\|ref\|XP_011649480.1\|	4.8e-62	62.91	PREDICTED: CASP-like protein 4D2 [Cucumis sativus]	[more]
gi\|595844705\|ref\|XP_007208789.1\|	1.3e-19	37.95	hypothetical protein PRUPE_ppa024180mg [Prunus persica]	[more]
gi\|769805653\|ref\|XP_011625256.1\|	6.5e-19	35.43	PREDICTED: CASP-like protein 4D1 [Amborella trichopoda]	[more]
gi\|731427261\|ref\|XP_010663913.1\|	1.2e-17	36.20	PREDICTED: CASP-like protein 4D1 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g09980.1	Cp4.1LG02g09980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Domain of unknown function DUF588	PFAM	PF04535	DUF588	coord: 6..162 score: 3.2
None	No IPR available	PANTHER	PTHR33573	FAMILY NOT NAMED	coord: 3..120 score: 6.8E-36coord: 141..180 score: 6.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG02g09980	Cucsa.112080	Cucumber (Gy14) v1	cgycpeB0260
Cp4.1LG02g09980	CmoCh01G007840	Cucurbita moschata (Rifu)	cmocpeB448
Cp4.1LG02g09980	Cla018660	Watermelon (97103) v1	cpewmB578
Cp4.1LG02g09980	Csa1G029610	Cucumber (Chinese Long) v2	cpecuB531
Cp4.1LG02g09980	MELO3C001930	Melon (DHL92) v3.5.1	cpemeB491
Cp4.1LG02g09980	ClCG04G012730	Watermelon (Charleston Gray)	cpewcgB507
Cp4.1LG02g09980	CSPI01G04920	Wild cucumber (PI 183967)	cpecpiB533
Cp4.1LG02g09980	Lsi02G000160	Bottle gourd (USVL1VR-Ls)	cpelsiB446
Cp4.1LG02g09980	MELO3C001930.2	Melon (DHL92) v3.6.1	cpemedB582
Cp4.1LG02g09980	CsaV3_1G004870	Cucumber (Chinese Long) v3	cpecucB0660
Cp4.1LG02g09980	Bhi08G001597	Wax gourd	cpewgoB0706
Cp4.1LG02g09980	Carg06992	Silver-seed gourd	carcpeB0738

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG02g09980	Silver-seed gourd	carcpeB0546
Cp4.1LG02g09980	Cucumber (Chinese Long) v3	cpecucB0665
Cp4.1LG02g09980	Cucurbita pepo (Zucchini)	cpecpeB433
Cp4.1LG02g09980	Cucumber (Gy14) v1	cgycpeB0261
Cp4.1LG02g09980	Cucurbita maxima (Rimu)	cmacpeB490
Cp4.1LG02g09980	Wild cucumber (PI 183967)	cpecpiB535
Cp4.1LG02g09980	Cucumber (Chinese Long) v2	cpecuB533
Cp4.1LG02g09980	Cucumber (Gy14) v2	cgybcpeB093
Cp4.1LG02g09980	Cucumber (Gy14) v2	cgybcpeB098