Carg06992 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg06992
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CASP-like protein
Location	Cucurbita_argyrosperma_scaffold_065 : 734600 .. 736566 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCATATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCTTTATCGCCTTGGTCGTAATCGCCACCGACAAACTGGTCCTCATTGATGGCTCTGAATCAACCTTCAATGACATTCAAGGATACAGGTTCTCTATTCGGCCTATTTCTAATACCCATTCCAATTCACGACCTAAAATTTCTTCTTCTTCATGCAGGTACGTTTTGTCCGTGGCAATCATAGGGTTGGTCCATACAATACTACAACTGGGTTTCTCTATTTACTATGCGGTTACCAAAACCATACCCTTTTGGAAGGGACTCCCTCAATTCAATTACTATACCGACCAGGTTTGTGTGATCACCACTTTTACTATCTTCTTCGTTAATTTCATTGACAAAAATTATCGAGAATGTTGTTCTTTCAAACTTAACCTCAACGTCATGATGTTTCTAGTCATCATCACATTAATTTTTTGTCCAACGAATTTTTAATCCAAAGTTAATCTTGAAAGCGTTTTTCAAAGATAAAATATCATTAATTTTGAAAGAATAAGGATAATTTTTAAACAAGAGGATGCCGAGTGTCACAATCGCACTCTTGATGGCAGTGGACTTGCGATTGTGCGACACTCACTTTCCAACAACAAGTGAGTTAAGCCGATTCGTTCTTACGTCGCCTACGACCAAGCGACGTATGCTCGAGCGACGTATGCTCGAGCCTCTAGCCTTGGTTTAAGAAGAAGGTTTTAGAAAGCGAGGGCAAACAGAGATTTTCGAAAGAGACTTTATATATGCAAACAATAGATAGAGAGCGAGTGCAACGAGAGATTTTCGAAAGAGAGATTTTAAAAGAGACTTTATATATGCAAGCAAGAGATAGAAATGCAAGCAAGAAATAGAAAGCGAGGGCAAAGAGAGATTTAAAAAGAGCCTTTATATATGCAAGCAAGAGAGTAACAAGAACAACGGTCAAGAGAGTAACAAGAACAACGGTCAAGAGAGTAACAATTAGTAAGGAGATGTTGACAACTAGTCATTAGTAAGGAGATGTTGACAACTAGTCATTAGTAAGGAGATGTTGACAACTAGTCATTAGTAAGGAGATGTTGACAACTAATCATTAGTAAGGAGATGTTGACAACTAGTCATCCCCTAGCACATTTTGAGGCATTTCATGTCTGACAGATTTTTCCGAAATCCTAGAAATACAAAAATAAAACACTACAGAGATAAAAGGATTTTGCTTGTGTCATGTGGTCATGGACAACATGCCTTGGACGATCATGACTGTGACACCGAGCTCCAAGGGATGGATTATGGGATTCCATCTCGTTGGAGAGGGAGACGAAACATCTCCTATAAATAGAAATCTCTCCCTAGTAGAAGCATTTTAAAATTGATAAGGGCAATATCTGCTTACGATCATTTATTTCAAAATCAAGAAACCAAATAGAAATAACTTAACCTAATTTGTTGAAAACTTGCTGATATCCAAATGGGAAAGGCAGGTGATAAGTTGGGTGTTGGCATCGGCGGCGGGGGCCGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATCAAGTTGTGGAGAACGGTATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCACCATTCAATCGGCTCAAACCTATTCCCACCACCCAAGATCTTGAGGCCCATTCTCCGCAGGCCCAAAAGAGCAAGGCCCAATCTCCACAGGCCCACACAGTCGAGGCCCAATCTCCACAGGCCCATACAGTCGAGGCCCAATCTCCACGGGCTCAACATGTTGATGCCCAATCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

mRNA sequence

ATGGATCATATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCTTTATCGCCTTGGTCGTAATCGCCACCGACAAACTGGTCCTCATTGATGGCTCTGAATCAACCTTCAATGACATTCAAGGATACAGGTACGTTTTGTCCGTGGCAATCATAGGGTTGGTCCATACAATACTACAACTGGGTTTCTCTATTTACTATGCGGTTACCAAAACCATACCCTTTTGGAAGGGACTCCCTCAATTCAATTACTATACCGACCAGGTGATAAGTTGGGTGTTGGCATCGGCGGCGGGGGCCGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATCAAGTTGTGGAGAACGGTATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCACCATTCAATCGGCTCAAACCTATTCCCACCACCCAAGATCTTGAGGCCCATTCTCCGCAGGCCCAAAAGAGCAAGGCCCAATCTCCACAGGCCCACACAGTCGAGGCCCAATCTCCACAGGCCCATACAGTCGAGGCCCAATCTCCACGGGCTCAACATGTTGATGCCCAATCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

Coding sequence (CDS)

ATGGATCATATGGTGGTAGCGTTCATCGGGATTGGACTTCGAATCTTCGCCTTCATATGTCTCTTTATCGCCTTGGTCGTAATCGCCACCGACAAACTGGTCCTCATTGATGGCTCTGAATCAACCTTCAATGACATTCAAGGATACAGGTACGTTTTGTCCGTGGCAATCATAGGGTTGGTCCATACAATACTACAACTGGGTTTCTCTATTTACTATGCGGTTACCAAAACCATACCCTTTTGGAAGGGACTCCCTCAATTCAATTACTATACCGACCAGGTGATAAGTTGGGTGTTGGCATCGGCGGCGGGGGCCGGCCTTGCGGTGTCGGCGGATCGTAAAATGTTACTGAATCAAGTTGTGGAGAACGGTATCGGCGATTGCGGAGTGTTGTTTGCAGCATTGGATCAGCAGAAGTGGTTGGTTGACGATTTCTTCGATAGGGCCAATATCGCCTCTGCCATTCTCTTCCTTGCTTTCCTCTCCATCGCCACTATCCTCCTCCTCTCACCATTCAATCGGCTCAAACCTATTCCCACCACCCAAGATCTTGAGGCCCATTCTCCGCAGGCCCAAAAGAGCAAGGCCCAATCTCCACAGGCCCACACAGTCGAGGCCCAATCTCCACAGGCCCATACAGTCGAGGCCCAATCTCCACGGGCTCAACATGTTGATGCCCAATCTCCACAGGCCCAAAAGGTCGAGGCCCAACCTACGGAGACCTCTTCCACTTGA

Protein sequence

MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQVVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIPTTQDLEAHSPQAQKSKAQSPQAHTVEAQSPQAHTVEAQSPRAQHVDAQSPQAQKVEAQPTETSST

Homology

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BLAST of Carg06992 vs. NCBI nr
Match: XP_023524544.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 356.7 bits (914), Expect = 6.4e-95
Identity = 185/189 (97.88%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD MVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQ 120
           VHTILQLGFSIYYAVTK IPFW GLPQFNYYTDQVISWVL SAAGAGLAVSADRKMLLNQ
Sbjct: 61  VHTILQLGFSIYYAVTKNIPFWNGLPQFNYYTDQVISWVLVSAAGAGLAVSADRKMLLNQ 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
           VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP
Sbjct: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180

Query: 181 TTQDLEAHS 190
           TTQDLEAHS
Sbjct: 181 TTQDLEAHS 189

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BLAST of Carg06992 vs. NCBI nr
Match: XP_022949251.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 343.6 bits (880), Expect = 5.6e-91
Identity = 178/189 (94.18%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           M  MVVAFIGIGLRIFAFICL IALVVIATDKLVLI+GSESTFNDIQGYRYVL+VAIIGL
Sbjct: 1   MGRMVVAFIGIGLRIFAFICLLIALVVIATDKLVLIEGSESTFNDIQGYRYVLAVAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQ 120
           VHTILQLGFSIYYAVTK IPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLN+
Sbjct: 61  VHTILQLGFSIYYAVTKNIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNE 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
           VVE GIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNR++PIP
Sbjct: 121 VVETGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRIEPIP 180

Query: 181 TTQDLEAHS 190
           TTQDLEA S
Sbjct: 181 TTQDLEAQS 189

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BLAST of Carg06992 vs. NCBI nr
Match: XP_022998177.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 340.9 bits (873), Expect = 3.6e-90
Identity = 174/188 (92.55%), Postives = 183/188 (97.34%), Query Frame = 0


Query: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD MVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFND+QGYRYVL+VAIIGL
Sbjct: 1   MDRMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDVQGYRYVLAVAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQ 120
           VHTILQLGFSIYYAVT+ +PFWKGLPQFNYY DQVI+WVLASAAGAGLAVSADRKMLLNQ
Sbjct: 61  VHTILQLGFSIYYAVTQIVPFWKGLPQFNYYADQVINWVLASAAGAGLAVSADRKMLLNQ 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPIP 180
           VVEN IGDC VLFAALDQQKWLV+DFFDRANIASAILFLAFLSIAT+LLLSPFNR+KP+P
Sbjct: 121 VVENDIGDCVVLFAALDQQKWLVNDFFDRANIASAILFLAFLSIATLLLLSPFNRIKPMP 180

Query: 181 TTQDLEAH 189
           TTQDLEAH
Sbjct: 181 TTQDLEAH 188

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BLAST of Carg06992 vs. NCBI nr
Match: XP_022137163.1 (CASP-like protein 4D1 [Momordica charantia])

HSP 1 Score: 260.4 bits (664), Expect = 6.2e-66
Identity = 133/190 (70.00%), Postives = 161/190 (84.74%), Query Frame = 0


Query: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD  VVAFI IGLR F FICL IALVVIATDKL LIDG ++TFNDI GYRYVLS+AIIGL
Sbjct: 1   MDPKVVAFIVIGLRSFTFICLLIALVVIATDKLALIDGYKATFNDIHGYRYVLSIAIIGL 60

Query: 61  VHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQ 120
            HTILQLGFS+Y+ +T+ IPFW GLPQFNYY DQV++WVLASAAGAG AV+A+ K L+++
Sbjct: 61  AHTILQLGFSLYHVLTQNIPFWNGLPQFNYYADQVLAWVLASAAGAGFAVTAELKRLVDE 120

Query: 121 VVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPI- 180
            ++N +GD  +   A+DQQ+ L+DDFFD+ANIA+AILFLAFLS+AT+LLLSPFNR+KP+ 
Sbjct: 121 NIKNAVGDYELFIPAVDQQESLIDDFFDKANIATAILFLAFLSMATLLLLSPFNRIKPLE 180

Query: 181 PTTQDLEAHS 190
            TTQD EA +
Sbjct: 181 TTTQDPEAQA 190

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BLAST of Carg06992 vs. NCBI nr
Match: XP_008454028.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo])

HSP 1 Score: 237.3 bits (604), Expect = 5.6e-59
Identity = 126/189 (66.67%), Postives = 149/189 (78.84%), Query Frame = 0


Query: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD  V+  IGIG+RIF FICL IALVVIATDKL LI+G ++TFND+ GYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  VHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQ 120
            HTILQLGFSIY+ +T+ I FW GLPQ NYY DQVI+WVLA+A GAG AVS + K  +N 
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 VVENGIGD-CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPI 180
            +    GD  G   A +D+QK L+DDFFD+ANIA+AILFLAF+S+AT+LLLSPFNR+KP 
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 P-TTQDLEA 188
           P  TQD EA
Sbjct: 181 PLPTQDPEA 189

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BLAST of Carg06992 vs. TAIR10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 43  FNDIQGYRYVLSVAIIGLVHTILQLGFSI-YYAVTKTIPFWKGLPQFNYYTDQVISWVLA 102
           FND+  YRY+LS A+IGLV+ ++QL  +I  +A  KT P      QF++Y D+VIS++LA
Sbjct: 53  FNDVYAYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPL---TYQFDFYGDKVISYLLA 112

Query: 103 SAAGAGLAVSADRKMLLNQVVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAF 162
           + + AG  VS D K     ++E         F + D     VD FF +   ++++L  AF
Sbjct: 113 TGSAAGFGVSKDLKDTYIALIE---------FDSTDP----VDKFFSKGYASASLLLFAF 172

Query: 163 LSIATILLLSPFNRLK-PIPTT 183
           +S+A + + S     K P+P +
Sbjct: 173 VSLAVLSVFSSLALSKRPVPVS 178

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BLAST of Carg06992 vs. TAIR10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 71.2 bits (173), Expect = 9.7e-13
Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 0


Query: 19  ICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGFSI-YYA 78
           + L IAL++++T+ + ++    +    F D+  YRY+LS A+IGLV+ ++QL F+I  +A
Sbjct: 26  VFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYAVIQLFFTISEFA 85

Query: 79  VTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQVVENGIGDCGVLFA 138
                PF     Q ++Y D++IS+++A+ + AG  V+ D K            D  +   
Sbjct: 86  TGVKNPF---NYQLDFYGDKLISYLVATGSAAGFGVTKDLK------------DTFLALV 145

Query: 139 ALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLK 178
           ALD     VD FF +   ++++L  AF+ +A + + S F   K
Sbjct: 146 ALDSTD-PVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

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BLAST of Carg06992 vs. Swiss-Prot
Match: sp|Q8GWD5|CSPLC_ARATH (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-12
Identity = 51/142 (35.92%), Postives = 80/142 (56.34%), Query Frame = 0


Query: 43  FNDIQGYRYVLSVAIIGLVHTILQLGFSI-YYAVTKTIPFWKGLPQFNYYTDQVISWVLA 102
           FND+  YRY+LS A+IGLV+ ++QL  +I  +A  KT P      QF++Y D+VIS++LA
Sbjct: 53  FNDVYAYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPL---TYQFDFYGDKVISYLLA 112

Query: 103 SAAGAGLAVSADRKMLLNQVVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAF 162
           + + AG  VS D K     ++E         F + D     VD FF +   ++++L  AF
Sbjct: 113 TGSAAGFGVSKDLKDTYIALIE---------FDSTDP----VDKFFSKGYASASLLLFAF 172

Query: 163 LSIATILLLSPFNRLK-PIPTT 183
           +S+A + + S     K P+P +
Sbjct: 173 VSLAVLSVFSSLALSKRPVPVS 178

[Close]

BLAST of Carg06992 vs. Swiss-Prot
Match: sp|D7LD59|CSPLL_ARALL (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.9e-12
Identity = 50/163 (30.67%), Postives = 89/163 (54.60%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LR+   + L IAL++++T+ + ++    +    F D+  YRY+LS A+IGL++ ++QL F
Sbjct: 20  LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLLYAVIQLFF 79

Query: 73  SI-YYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQVVENGIGD 132
           +I  +A     PF     Q ++Y D++IS+++A+ + AG  VS D K            D
Sbjct: 80  TISEFATGMKNPF---NYQLDFYGDKLISYLVATGSAAGFGVSKDLK------------D 139

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLS 172
             +   ALD     VD FF R   ++++L  +F+ +A + + S
Sbjct: 140 AFIALVALDSTD-PVDKFFSRGYASASLLLFSFICLAVLSVFS 166

[Close]

BLAST of Carg06992 vs. Swiss-Prot
Match: sp|Q56X75|CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.8e-11
Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 0


Query: 19  ICLFIALVVIATDKLVLIDGSEST---FNDIQGYRYVLSVAIIGLVHTILQLGFSI-YYA 78
           + L IAL++++T+ + ++    +    F D+  YRY+LS A+IGLV+ ++QL F+I  +A
Sbjct: 26  VFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYAVIQLFFTISEFA 85

Query: 79  VTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQVVENGIGDCGVLFA 138
                PF     Q ++Y D++IS+++A+ + AG  V+ D K            D  +   
Sbjct: 86  TGVKNPF---NYQLDFYGDKLISYLVATGSAAGFGVTKDLK------------DTFLALV 145

Query: 139 ALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLK 178
           ALD     VD FF +   ++++L  AF+ +A + + S F   K
Sbjct: 146 ALDSTD-PVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

[Close]

BLAST of Carg06992 vs. Swiss-Prot
Match: sp|D7LD60|CSPLK_ARALL (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.3e-11
Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 43  FNDIQGYRYVLSVAIIGLVHTILQLGFSI-YYAVTKTIPFWKGLPQFNYYTDQVISWVLA 102
           FND+  YRY+LS A+IGL++ ++QL  +I  +A   T P      QFN+Y D++IS++LA
Sbjct: 53  FNDVYAYRYMLSAAVIGLLYAVVQLFLTISQFATGTTHPL---NYQFNFYGDKIISYLLA 112

Query: 103 SAAGAGLAVSADRKMLLNQVVENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAF 162
           + + AG  VS D K     ++E         F + D     VD FF +   ++++L  AF
Sbjct: 113 TGSAAGFGVSKDLKETFLALIE---------FDSTDP----VDKFFSKGYASASLLLFAF 166

Query: 163 LSIATILLLS 172
           +S+A + + S
Sbjct: 173 VSLAVLSVFS 166

[Close]

BLAST of Carg06992 vs. Swiss-Prot
Match: sp|B9SXY8|CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-10
Identity = 51/165 (30.91%), Postives = 86/165 (52.12%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVL-IDGSEST--FNDIQGYRYVLSVAIIGLVHTILQLGF 72
           LRI  FI L  +LV++ T+   L +D  E    F D+  YRY+L+  +IGL +T+LQ+ F
Sbjct: 17  LRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGLAYTVLQIAF 76

Query: 73  SIYYAVT-KTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQVVENGIGD 132
           ++YY  T   +    G   F+++ D+VIS++L + A AG A + D K      V +G GD
Sbjct: 77  TLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIK-----PVFSGSGD 136

Query: 133 CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPF 174
                          D F ++   ++++L + F+  A + + S +
Sbjct: 137 --------------FDAFINKGYASASLLLIGFVCTAVLSVFSSY 162

[Close]

BLAST of Carg06992 vs. TrEMBL
Match: tr|A0A1S3BYF7|A0A1S3BYF7_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.7e-59
Identity = 126/189 (66.67%), Postives = 149/189 (78.84%), Query Frame = 0


Query: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD  V+  IGIG+RIF FICL IALVVIATDKL LI+G ++TFND+ GYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  VHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQ 120
            HTILQLGFSIY+ +T+ I FW GLPQ NYY DQVI+WVLA+A GAG AVS + K  +N 
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 VVENGIGD-CGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKPI 180
            +    GD  G   A +D+QK L+DDFFD+ANIA+AILFLAF+S+AT+LLLSPFNR+KP 
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 P-TTQDLEA 188
           P  TQD EA
Sbjct: 181 PLPTQDPEA 189

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BLAST of Carg06992 vs. TrEMBL
Match: tr|A0A0A0LSG6|A0A0A0LSG6_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G029610 PE=3 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 6.0e-57
Identity = 119/182 (65.38%), Postives = 145/182 (79.67%), Query Frame = 0


Query: 1   MDHMVVAFIGIGLRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGL 60
           MD  V+A IGIGLRIF FICL IALVVIATDKL LI+G ++TFNDI GYRYVLSVA+IGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  VHTILQLGFSIYYAVTKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQ 120
            HTILQLGFSIY+ +T+ IPFW GLPQ NYY DQVI+W+LA+  GAG AVS + K  ++ 
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 VV--ENGIGDCGVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNRLKP 180
               E G  D G    A+++QK L+DDFF++A +A+AILFLAF+S+AT+LLLSPFNR+KP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

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BLAST of Carg06992 vs. TrEMBL
Match: tr|M5WL71|M5WL71_PRUPE (CASP-like protein OS=Prunus persica OX=3760 GN=PRUPE_5G239200 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 2.2e-19
Identity = 64/166 (38.55%), Postives = 101/166 (60.84%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIY 72
           LRI   + L  ++VV+ TD   L DG++  F DI  YR+VL+ A IG  +T++QL F IY
Sbjct: 13  LRIVTLLALVASVVVLVTDHFTLQDGTQQHFQDIHAYRFVLATAAIGAAYTLIQLPFDIY 72

Query: 73  YAVTKTIPFWKG-LPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQ--VVENGIGDC 132
           YA  +      G +P+F++Y D+++S VLAS  GAG  V  + K +LN   ++   +G+ 
Sbjct: 73  YACAQKRLIRHGCMPEFDFYADKLVSLVLASGVGAGFGVGFEFKRVLNDLFLLLLALGED 132

Query: 133 GVLFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNR 176
            V   +LD+++   + FF+RANIA+ +L +  + +A I +LS  NR
Sbjct: 133 PV---SLDEEQSKDNAFFNRANIATGVLLVGAICMAVISVLSSINR 175

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BLAST of Carg06992 vs. TrEMBL
Match: tr|A0A200QE22|A0A200QE22_9MAGN (CASP-like protein OS=Macleaya cordata OX=56857 GN=BVC80_1613g8 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 1.1e-18
Identity = 56/164 (34.15%), Postives = 100/164 (60.98%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIY 72
           LRI A   L  ++VV+AT+   L DG++++F DI  YRYV++  ++G ++ +LQ+ F++Y
Sbjct: 14  LRILALGLLAGSIVVLATNNFTLSDGTKTSFKDIIAYRYVIATGLLGFLYILLQIPFALY 73

Query: 73  YAVTKTIPFWKG-LPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQVVENGIGDCGV 132
           +   +      G LPQF++Y D++IS +LA+  G G  V+ + K L++Q  +N      +
Sbjct: 74  HVCAEKRLIRNGCLPQFDFYGDKIISLLLATGVGVGFGVTFEFKKLVDQFFQN------I 133

Query: 133 LFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNR 176
               +D+ K   + F D+ N+++ +LFL FL +A + +L+  NR
Sbjct: 134 NVPGVDESKSKTEKFLDKGNLSTGLLFLGFLCVAVLSVLTSINR 171

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BLAST of Carg06992 vs. TrEMBL
Match: tr|A0A1U8G8Q8|A0A1U8G8Q8_CAPAN (CASP-like protein OS=Capsicum annuum OX=4072 GN=LOC107866047 PE=3 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.3e-16
Identity = 60/164 (36.59%), Postives = 102/164 (62.20%), Query Frame = 0


Query: 13  LRIFAFICLFIALVVIATDKLVLIDGSESTFNDIQGYRYVLSVAIIGLVHTILQLGFSIY 72
           LRI        A+V++ T+   L DG ++ F+DI+G+RYVL+ A  G++++++QL F++Y
Sbjct: 15  LRILTLWACVAAVVLMVTNNFKL-DGDKTKFSDIKGFRYVLAAAAGGVLYSLIQLPFAVY 74

Query: 73  YAV-TKTIPFWKGLPQFNYYTDQVISWVLASAAGAGLAVSADRKMLLNQVVENGIGDCGV 132
            AV  K +   + LP F++Y D+VI+++LAS  G G  VS + K L++Q+V+ G    GV
Sbjct: 75  QAVKEKRLINGQFLPMFDFYGDKVIAFLLASGVGVGFGVSIELKQLIDQLVD-GFDSLGV 134

Query: 133 LFAALDQQKWLVDDFFDRANIASAILFLAFLSIATILLLSPFNR 176
               LD+ +     + DR  IAS +L + F+++A + +L+  NR
Sbjct: 135 --TGLDEFEDKTKKYLDRGIIASGVLLVGFVTMAILTILTSANR 174

The following BLAST results are available for this feature:

BLAST of Carg06992 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023524544.1	6.4e-95	97.88	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022949251.1	5.6e-91	94.18	CASP-like protein 4D1 [Cucurbita moschata]	[more]
XP_022998177.1	3.6e-90	92.55	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_022137163.1	6.2e-66	70.00	CASP-like protein 4D1 [Momordica charantia]	[more]
XP_008454028.1	5.6e-59	66.67	PREDICTED: CASP-like protein 4D1 [Cucumis melo]	[more]

BLAST of Carg06992 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39530.1	1.1e-13	35.92	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	9.7e-13	30.67	Uncharacterised protein family (UPF0497)	[more]

BLAST of Carg06992 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GWD5\|CSPLC_ARATH	2.1e-12	35.92	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]
sp\|D7LD59\|CSPLL_ARALL	7.9e-12	30.67	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
sp\|Q56X75\|CSPLB_ARATH	1.8e-11	30.67	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
sp\|D7LD60\|CSPLK_ARALL	2.3e-11	35.38	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]
sp\|B9SXY8\|CSPLE_RICCO	1.5e-10	30.91	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]

BLAST of Carg06992 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BYF7\|A0A1S3BYF7_CUCME	3.7e-59	66.67	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103494310 PE=3 SV=1	[more]
tr\|A0A0A0LSG6\|A0A0A0LSG6_CUCSA	6.0e-57	65.38	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G029610 PE=3 SV=1	[more]
tr\|M5WL71\|M5WL71_PRUPE	2.2e-19	38.55	CASP-like protein OS=Prunus persica OX=3760 GN=PRUPE_5G239200 PE=3 SV=1	[more]
tr\|A0A200QE22\|A0A200QE22_9MAGN	1.1e-18	34.15	CASP-like protein OS=Macleaya cordata OX=56857 GN=BVC80_1613g8 PE=3 SV=1	[more]
tr\|A0A1U8G8Q8\|A0A1U8G8Q8_CAPAN	1.3e-16	36.59	CASP-like protein OS=Capsicum annuum OX=4072 GN=LOC107866047 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg06992-RA	Carg06992-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..162 e-value: 3.7E-16 score: 59.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..245
None	No IPR available	PANTHER	PTHR33573	FAMILY NOT NAMED	coord: 7..175
None	No IPR available	PANTHER	PTHR33573:SF5	SUBFAMILY NOT NAMED	coord: 7..175

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg06992	Cla018660	Watermelon (97103) v1	carwmB0519
Carg06992	Csa1G029610	Cucumber (Chinese Long) v2	carcuB0546
Carg06992	MELO3C001930	Melon (DHL92) v3.5.1	carmeB0523
Carg06992	ClCG04G012730	Watermelon (Charleston Gray)	carwcgB0508
Carg06992	CSPI01G04920	Wild cucumber (PI 183967)	carcpiB0553
Carg06992	Cucsa.112080	Cucumber (Gy14) v1	carcgyB0596
Carg06992	CmoCh01G007840	Cucurbita moschata (Rifu)	carcmoB0708
Carg06992	Lsi02G000160	Bottle gourd (USVL1VR-Ls)	carlsiB474
Carg06992	Cp4.1LG02g09980	Cucurbita pepo (Zucchini)	carcpeB0738
Carg06992	MELO3C001930.2	Melon (DHL92) v3.6.1	carmedB0529
Carg06992	CsaV3_1G004870	Cucumber (Chinese Long) v3	carcucB0552
Carg06992	Cla97C04G079780	Watermelon (97103) v2	carwmbB0549
Carg06992	Bhi08G001597	Wax gourd	carwgoB0631

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg06992	Cucumber (Gy14) v2	carcgybB0522
Carg06992	Cucumber (Gy14) v2	carcgybB0526
Carg06992	Cucumber (Gy14) v1	carcgyB0597
Carg06992	Cucurbita maxima (Rimu)	carcmaB0731
Carg06992	Wild cucumber (PI 183967)	carcpiB0556
Carg06992	Cucumber (Chinese Long) v2	carcuB0549
Carg06992	Cucumber (Chinese Long) v3	carcucB0555