Cla018660 (gene) Watermelon (97103) v1

Overview
NameCla018660
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCASP-like protein RCOM_1206790 (AHRD V1 *-*- CSPLE_RICCO); contains Interpro domain(s) IPR006702 Uncharacterised protein family UPF0497, trans-membrane plant
LocationChr4 : 24074079 .. 24074933 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCTAAGGTGGTAGCGTTGATTGGGGTTGGACTTAGAATCTTCATCTTCCTATGTCTCCTCATTGCCTTAGTCGTAATTGCCACTGACAAATTGGCCCTCATTGATGGCTTCAAAGCAACCTTCAATGATGTCCAAGGATACAGGTTCGCTGCTCTGCCCATCAATCTCATTTACAATAGTAATCATTACAAATTCACTACCAGAAGTTTTGTTTCCTCATACTGTTCTTGCAATGCAATGCAGGTACGTATTGTCTGTTGCAATTATAGGGTTGGCCCATACAATTTTACAACTGGGTTTCTCTATATACCATGTGATTACCCAAAACATACCCTTTTGGAATGGGCTTCCACTATTCAACTACTACGCAGACCAGGTTGGTGACTTAACCAATTATTAATTTCTTTAGAACTTTGGGCTCACGAGTGAACCAAATGGCATGGAAATTTGGGAATGTATATGCAGGTGATAACTTGGGTGTTGGCCACGGCGGTTGGGGCTGGCTTTGCGGTCACCGCAGAGCTGAAAAGATTCGTGGATTCAAGAATTGACAGGGAACTTGGGGATTACGGGTTCTTCAGTCCACAAGTGGATGAGCAGAAATCTTTGATTGACGAATTCTTCGATAAGGCCTATATTGCCACTGCCATTCTCTTCCTTGCTTTCCTCTCCATGGCCACTCTCCTCCTTCTCTCCCCGTTCAATCGGATCAAACCAACTCCTCGCCCCACACAAGATCTCGAGGCCCAAAAGCTCGAGGCCCAATCTTCCCAGGCCCAATCTTCCCAGGCCCAATCGTCCCAGGCCCAACCTACTGAGGCCCACTCACCGGAGCCCCCTTCCGGTTGA

mRNA sequence

ATGGATCCTAAGGTGGTAGCGTTGATTGGGGTTGGACTTAGAATCTTCATCTTCCTATGTCTCCTCATTGCCTTAGTCGTAATTGCCACTGACAAATTGGCCCTCATTGATGGCTTCAAAGCAACCTTCAATGATGTCCAAGGATACAGGTACGTATTGTCTGTTGCAATTATAGGGTTGGCCCATACAATTTTACAACTGGGTTTCTCTATATACCATGTGATTACCCAAAACATACCCTTTTGGAATGGGCTTCCACTATTCAACTACTACGCAGACCAGGTGATAACTTGGGTGTTGGCCACGGCGGTTGGGGCTGGCTTTGCGGTCACCGCAGAGCTGAAAAGATTCGTGGATTCAAGAATTGACAGGGAACTTGGGGATTACGGGTTCTTCAGTCCACAAGTGGATGAGCAGAAATCTTTGATTGACGAATTCTTCGATAAGGCCTATATTGCCACTGCCATTCTCTTCCTTGCTTTCCTCTCCATGGCCACTCTCCTCCTTCTCTCCCCGTTCAATCGGATCAAACCAACTCCTCGCCCCACACAAGATCTCGAGGCCCAAAAGCTCGAGGCCCAATCTTCCCAGGCCCAATCTTCCCAGGCCCAATCGTCCCAGGCCCAACCTACTGAGGCCCACTCACCGGAGCCCCCTTCCGGTTGA

Coding sequence (CDS)

ATGGATCCTAAGGTGGTAGCGTTGATTGGGGTTGGACTTAGAATCTTCATCTTCCTATGTCTCCTCATTGCCTTAGTCGTAATTGCCACTGACAAATTGGCCCTCATTGATGGCTTCAAAGCAACCTTCAATGATGTCCAAGGATACAGGTACGTATTGTCTGTTGCAATTATAGGGTTGGCCCATACAATTTTACAACTGGGTTTCTCTATATACCATGTGATTACCCAAAACATACCCTTTTGGAATGGGCTTCCACTATTCAACTACTACGCAGACCAGGTGATAACTTGGGTGTTGGCCACGGCGGTTGGGGCTGGCTTTGCGGTCACCGCAGAGCTGAAAAGATTCGTGGATTCAAGAATTGACAGGGAACTTGGGGATTACGGGTTCTTCAGTCCACAAGTGGATGAGCAGAAATCTTTGATTGACGAATTCTTCGATAAGGCCTATATTGCCACTGCCATTCTCTTCCTTGCTTTCCTCTCCATGGCCACTCTCCTCCTTCTCTCCCCGTTCAATCGGATCAAACCAACTCCTCGCCCCACACAAGATCTCGAGGCCCAAAAGCTCGAGGCCCAATCTTCCCAGGCCCAATCTTCCCAGGCCCAATCGTCCCAGGCCCAACCTACTGAGGCCCACTCACCGGAGCCCCCTTCCGGTTGA

Protein sequence

MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGLAHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDSRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTPRPTQDLEAQKLEAQSSQAQSSQAQSSQAQPTEAHSPEPPSG
Homology
[Close]
BLAST of Cla018660 vs. Swiss-Prot
Match: CSPLC_SORBI (CASP-like protein 4D1 OS=Sorghum bicolor GN=Sb05g021340 PE=2 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.2e-17
Identity = 62/174 (35.63%), Postives = 91/174 (52.30%), Query Frame = 1 

Query: 13  LRIFIFLCLLIALVVIATDKLALIDG--FKATFNDVQGYRYVLSVAIIGLAHTILQLGFS 72
           LR+     L  +L +IA DKL +      + TF DV  YRYVL+VA+IG A+T+LQL  +
Sbjct: 15  LRLLSLGLLAASLALIAADKLNVDSDPPQRYTFRDVYAYRYVLAVAVIGCAYTLLQLPLA 74

Query: 73  IYHVIT-----QNIPFWNG-----LPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 132
              +I      + I    G     L +    AD V   +LAT   AGFA T ++KR++D 
Sbjct: 75  AVSIIASGNNKRGIGAGGGSVAVALLVLVLLADVVFALLLATGAAAGFAFTYDVKRYLDG 134

Query: 133 RIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFN 175
           + D    D    +P+VD+    +D+FFD AY A  ++  A   MA +++LS ++
Sbjct: 135 QFD----DDSIGTPEVDKLHRDMDKFFDLAYAAAGLMLAAAACMALVIMLSVYS 184

[Close]
BLAST of Cla018660 vs. Swiss-Prot
Match: CSPLE_RICCO (CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.2e-17
Identity = 56/174 (32.18%), Postives = 92/174 (52.87%), Query Frame = 1 

Query: 4   KVVALIGVGLRIFIFLCLLIALVVIATDKLAL---IDGFKATFNDVQGYRYVLSVAIIGL 63
           ++ ALI   LRI  F+ L+ +LV++ T+   L   +   K  F DV  YRY+L+  +IGL
Sbjct: 11  RMAALI---LRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGL 70

Query: 64  AHTILQLGFSIYHVITQN-IPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVD 123
           A+T+LQ+ F++Y+V T N +   +G   F+++ D+VI+++L T   AGFA T ++K    
Sbjct: 71  AYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVFS 130

Query: 124 SRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPF 174
                  GD+              D F +K Y + ++L + F+  A L + S +
Sbjct: 131 GS-----GDF--------------DAFINKGYASASLLLIGFVCTAVLSVFSSY 162

[Close]
BLAST of Cla018660 vs. Swiss-Prot
Match: CSPLK_ARALL (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-16
Identity = 59/175 (33.71%), Postives = 92/175 (52.57%), Query Frame = 1 

Query: 13  LRIFIFLCLLIALVVIATDKLAL---IDGFKATFNDVQGYRYVLSVAIIGLAHTILQLGF 72
           LR+     L+I +V+I+T+ + L       K  FNDV  YRY+LS A+IGL + ++QL  
Sbjct: 20  LRVLTAAFLVITVVLISTNTVTLEVSSTSIKMRFNDVYAYRYMLSAAVIGLLYAVVQLFL 79

Query: 73  SIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDSRIDRELGDY 132
           +I    T      N    FN+Y D++I+++LAT   AGF V+ +LK    + I+ +  D 
Sbjct: 80  TISQFATGTTHPLN--YQFNFYGDKIISYLLATGSAAGFGVSKDLKETFLALIEFDSTD- 139

Query: 133 GFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTPRPTQ 185
                        +D+FF K Y + ++L  AF+S+A   +LS F+ +  + RP Q
Sbjct: 140 ------------PVDKFFSKGYASASLLLFAFVSLA---VLSVFSSLALSKRPIQ 176

[Close]
BLAST of Cla018660 vs. Swiss-Prot
Match: CSPLC_ARATH (CASP-like protein 4D1 OS=Arabidopsis thaliana GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.0e-15
Identity = 60/176 (34.09%), Postives = 92/176 (52.27%), Query Frame = 1 

Query: 13  LRIFIFLCLLIALVVIATDKLAL---IDGFKATFNDVQGYRYVLSVAIIGLAHTILQLGF 72
           LR+     LLI +V+I+T+ + L       K  FNDV  YRY+LS A+IGL + ++QL  
Sbjct: 20  LRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQLFL 79

Query: 73  SIYHVITQNIPFWNGLPL---FNYYADQVITWVLATAVGAGFAVTAELKRFVDSRIDREL 132
           +I    T         PL   F++Y D+VI+++LAT   AGF V+ +LK    + I+ + 
Sbjct: 80  TISQFATGKTH-----PLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDS 139

Query: 133 GDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPTPRP 183
            D              +D+FF K Y + ++L  AF+S+A   +LS F+ +  + RP
Sbjct: 140 TD-------------PVDKFFSKGYASASLLLFAFVSLA---VLSVFSSLALSKRP 174

[Close]
BLAST of Cla018660 vs. Swiss-Prot
Match: CSPLB_ARATH (CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.0e-15
Identity = 57/178 (32.02%), Postives = 93/178 (52.25%), Query Frame = 1 

Query: 4   KVVALIGVGLRIFIFLCLLIALVVIATDKLALID---GFKATFNDVQGYRYVLSVAIIGL 63
           KV+ L+   LR+   + L+IAL++++T+ + ++      K  F DV  YRY+LS A+IGL
Sbjct: 14  KVLLLL---LRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGL 73

Query: 64  AHTILQLGFSIYHVIT-QNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVD 123
            + ++QL F+I    T    PF   L   ++Y D++I++++AT   AGF VT +LK    
Sbjct: 74  VYAVIQLFFTISEFATGVKNPFNYQL---DFYGDKLISYLVATGSAAGFGVTKDLKD--- 133

Query: 124 SRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIK 178
                      F +    +    +D+FF K Y + ++L  AF+ +A L + S F   K
Sbjct: 134 ----------TFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAK 172

[Close]
BLAST of Cla018660 vs. TrEMBL
Match: A0A0A0LSG6_CUCSA (CASP-like protein OS=Cucumis sativus GN=Csa_1G029610 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 4.4e-90
Identity = 168/209 (80.38%), Postives = 190/209 (90.91%), Query Frame = 1 

Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKV+ALIG+GLRIF+F+CLLIALVVIATDKL+LI+GFKATFND+ GYRYVLSVA+IGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQLGFSIYHV+TQNIPFWNGLP  NYYADQVITW+LAT VGAGFAV+ ELK +VDS
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 RIDRELG--DYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKP 180
           R  +E G  DYGFFSP ++EQKSLID+FF+KA +ATAILFLAF+SMATLLLLSPFNRIKP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 TPRPTQDLEAQKLEAQSSQAQSSQAQSSQ 208
           TP P QD EAQK EAQSSQ Q ++AQSS+
Sbjct: 181 TPLPAQDPEAQKSEAQSSQVQHTEAQSSE 209

[Close]
BLAST of Cla018660 vs. TrEMBL
Match: A0A061FVH2_THECC (CASP-like protein OS=Theobroma cacao GN=TCM_013291 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.9e-24
Identity = 75/176 (42.61%), Postives = 102/176 (57.95%), Query Frame = 1 

Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           M  K + +  V LRIF  L     +VV+  DK   +DG K TF +V  YRYVL+ A++G 
Sbjct: 1   MASKAMPIATVLLRIFTILFAAGCVVVLILDKTTDVDGSKVTFKNVIAYRYVLATAVVGA 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNG-LPLFNYYADQVITWVLATAVGAGFAVTAELKRFVD 120
           A++ILQL F+IY+  T+      G LP F++Y D+V+ ++LAT VGAGF VT ELK F  
Sbjct: 61  AYSILQLPFAIYYACTEKRLIRGGFLPAFDFYGDKVMAFLLATGVGAGFLVTVELKEF-- 120

Query: 121 SRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNR 176
                 LGD  F     D + S  + FF+K Y+A ++L  AFL MA L + S   R
Sbjct: 121 ------LGDL-FKEFGADLKDSPFESFFNKGYLAVSLLAGAFLCMAVLSVFSSLQR 167

[Close]
BLAST of Cla018660 vs. TrEMBL
Match: A5B0Q9_VITVI (CASP-like protein OS=Vitis vinifera GN=VITISV_001156 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.1e-23
Identity = 68/175 (38.86%), Postives = 98/175 (56.00%), Query Frame = 1 

Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           M  K V    + LRI   L L  ++VV+AT+     DG K +F DV  YRYV +   +G 
Sbjct: 1   MASKAVVNSALVLRILTLLLLAASVVVMATNNFKFSDGTKTSFTDVIAYRYVAATGAVGF 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
            +T+ Q+ F++YH  T+        P F++Y D+VI+ +L T VGAGFAVT E KR ++ 
Sbjct: 61  LYTVAQIPFAVYHACTEKRLL---RPEFDFYGDKVISLLLGTGVGAGFAVTFEFKRNLND 120

Query: 121 RIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNR 176
            +    G        + E KS  ++F D+A IAT +LFL F+ MA L +LS  +R
Sbjct: 121 FVQ---GVEDLSGQDLSEFKSKTEKFLDRAIIATGLLFLGFICMAILSVLSSLSR 169

[Close]
BLAST of Cla018660 vs. TrEMBL
Match: B9I4V9_POPTR (CASP-like protein OS=Populus trichocarpa GN=POPTR_0012s03720g PE=3 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.0e-22
Identity = 70/183 (38.25%), Postives = 109/183 (59.56%), Query Frame = 1 

Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATD--KLALID-GFKATFNDVQGYRYVLSVAI 60
           M  + +A+  + LRIF  L L+  +V+  T+  + A+ D G K TF D+  YR+VLS A+
Sbjct: 1   MGSRAIAISTLVLRIFTLLALVACVVLFITNTFRYAMFDAGSKVTFKDLTTYRFVLSTAV 60

Query: 61  IGLAHTILQLGFSIYHVITQ-NIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKR 120
           IG A+T+LQL F++Y+ +T+  +   + LP  + Y D++I ++LA+ VGAGFAV+ E+K 
Sbjct: 61  IGAAYTLLQLPFALYYALTEKRLIKVDILPELDLYGDKIIAFLLASGVGAGFAVSVEIKS 120

Query: 121 FVDSRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRI 180
            +    D      GF     ++ K+L D F +K  IAT+ L   F+ MA + +LS  NR 
Sbjct: 121 LLKDLFD-AFALAGF--QDTEDSKALYDNFINKGIIATSALAFGFVCMALVSVLSSVNRT 180

[Close]
BLAST of Cla018660 vs. TrEMBL
Match: M5WL71_PRUPE (CASP-like protein OS=Prunus persica GN=PRUPE_ppa024180mg PE=3 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.8e-22
Identity = 65/164 (39.63%), Postives = 99/164 (60.37%), Query Frame = 1 

Query: 13  LRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGLAHTILQLGFSIY 72
           LRI   L L+ ++VV+ TD   L DG +  F D+  YR+VL+ A IG A+T++QL F IY
Sbjct: 13  LRIVTLLALVASVVVLVTDHFTLQDGTQQHFQDIHAYRFVLATAAIGAAYTLIQLPFDIY 72

Query: 73  HVITQNIPFWNG-LPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDSRIDRELGDYGF 132
           +   Q     +G +P F++YAD++++ VLA+ VGAGF V  E KR ++      L   G 
Sbjct: 73  YACAQKRLIRHGCMPEFDFYADKLVSLVLASGVGAGFGVGFEFKRVLNDLFLLLLA-LGE 132

Query: 133 FSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNR 176
               +DE++S  + FF++A IAT +L +  + MA + +LS  NR
Sbjct: 133 DPVSLDEEQSKDNAFFNRANIATGVLLVGAICMAVISVLSSINR 175

[Close]
BLAST of Cla018660 vs. NCBI nr
Match: gi|659066253|ref|XP_008454028.1| (PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo])

HSP 1 Score: 345.1 bits (884), Expect = 8.9e-92
Identity = 175/208 (84.13%), Postives = 193/208 (92.79%), Query Frame = 1 

Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKV+ LIG+G+RIF+F+CLLIALVVIATDKL+LI+GFKATFNDV GYRYVLSVA IGL
Sbjct: 1   MDPKVLPLIGIGIRIFVFICLLIALVVIATDKLSLINGFKATFNDVHGYRYVLSVATIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQLGFSIYHV+TQNI FWNGLP  NYYADQVITWVLATAVGAGFAV+ ELK +V+S
Sbjct: 61  AHTILQLGFSIYHVLTQNILFWNGLPQVNYYADQVITWVLATAVGAGFAVSGELKSYVNS 120

Query: 121 RIDRELGD-YGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKPT 180
           RI++E GD YGFFS QVDEQKSLID+FFDKA IATAILFLAF+SMATLLLLSPFNRIKPT
Sbjct: 121 RINKEFGDYYGFFSAQVDEQKSLIDDFFDKANIATAILFLAFISMATLLLLSPFNRIKPT 180

Query: 181 PRPTQDLEAQKLEAQSSQAQSSQAQSSQ 208
           P PTQD EAQKLEAQSSQAQ ++AQSS+
Sbjct: 181 PLPTQDPEAQKLEAQSSQAQQTEAQSSE 208

[Close]
BLAST of Cla018660 vs. NCBI nr
Match: gi|778656667|ref|XP_011649480.1| (PREDICTED: CASP-like protein 4D2 [Cucumis sativus])

HSP 1 Score: 339.0 bits (868), Expect = 6.4e-90
Identity = 168/209 (80.38%), Postives = 190/209 (90.91%), Query Frame = 1 

Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           MDPKV+ALIG+GLRIF+F+CLLIALVVIATDKL+LI+GFKATFND+ GYRYVLSVA+IGL
Sbjct: 1   MDPKVLALIGIGLRIFVFICLLIALVVIATDKLSLINGFKATFNDIHGYRYVLSVAVIGL 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNGLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVDS 120
           AHTILQLGFSIYHV+TQNIPFWNGLP  NYYADQVITW+LAT VGAGFAV+ ELK +VDS
Sbjct: 61  AHTILQLGFSIYHVLTQNIPFWNGLPQVNYYADQVITWMLATGVGAGFAVSRELKSYVDS 120

Query: 121 RIDRELG--DYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIKP 180
           R  +E G  DYGFFSP ++EQKSLID+FF+KA +ATAILFLAF+SMATLLLLSPFNRIKP
Sbjct: 121 RTKKEFGDNDYGFFSPAIEEQKSLIDDFFNKATVATAILFLAFISMATLLLLSPFNRIKP 180

Query: 181 TPRPTQDLEAQKLEAQSSQAQSSQAQSSQ 208
           TP P QD EAQK EAQSSQ Q ++AQSS+
Sbjct: 181 TPLPAQDPEAQKSEAQSSQVQHTEAQSSE 209

[Close]
BLAST of Cla018660 vs. NCBI nr
Match: gi|769805653|ref|XP_011625256.1| (PREDICTED: CASP-like protein 4D1 [Amborella trichopoda])

HSP 1 Score: 126.7 bits (317), Expect = 5.0e-26
Identity = 70/174 (40.23%), Postives = 108/174 (62.07%), Query Frame = 1 

Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           M  + V    + LRI  F+ L I+++++ TDK+   D  + TF D++ YRY+LS ++IG 
Sbjct: 1   MATRAVRFATILLRILTFILLAISVIILVTDKVKFSDKSEVTFKDIKAYRYLLSASVIGC 60

Query: 61  AHTILQLGFSIYHVITQNIPFWN-GLPLFNYYADQVITWVLATAVGAGFAVTAELKRFVD 120
           A++++Q+ F++Y V T      N  LP F++Y D++I   LA+AVG GF VT ELK+ +D
Sbjct: 61  AYSLIQIPFAVYWVSTSKRLIRNICLPYFDFYGDKIIALFLASAVGVGFGVTVELKKLLD 120

Query: 121 SRID--RELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLS 172
             ID  R LG+  F S     + S +D+FFDK  ++T  + LAF+ MA L +LS
Sbjct: 121 GFIDSLRFLGEDQFAS-----EASKLDKFFDKGNVSTGFILLAFICMAILSILS 169

[Close]
BLAST of Cla018660 vs. NCBI nr
Match: gi|590666713|ref|XP_007037039.1| (UPF0497 membrane protein, putative [Theobroma cacao])

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24
Identity = 75/176 (42.61%), Postives = 102/176 (57.95%), Query Frame = 1 

Query: 1   MDPKVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGFKATFNDVQGYRYVLSVAIIGL 60
           M  K + +  V LRIF  L     +VV+  DK   +DG K TF +V  YRYVL+ A++G 
Sbjct: 1   MASKAMPIATVLLRIFTILFAAGCVVVLILDKTTDVDGSKVTFKNVIAYRYVLATAVVGA 60

Query: 61  AHTILQLGFSIYHVITQNIPFWNG-LPLFNYYADQVITWVLATAVGAGFAVTAELKRFVD 120
           A++ILQL F+IY+  T+      G LP F++Y D+V+ ++LAT VGAGF VT ELK F  
Sbjct: 61  AYSILQLPFAIYYACTEKRLIRGGFLPAFDFYGDKVMAFLLATGVGAGFLVTVELKEF-- 120

Query: 121 SRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNR 176
                 LGD  F     D + S  + FF+K Y+A ++L  AFL MA L + S   R
Sbjct: 121 ------LGDL-FKEFGADLKDSPFESFFNKGYLAVSLLAGAFLCMAVLSVFSSLQR 167

[Close]
BLAST of Cla018660 vs. NCBI nr
Match: gi|769805965|ref|XP_006849475.2| (PREDICTED: CASP-like protein 4D1 [Amborella trichopoda])

HSP 1 Score: 119.8 bits (299), Expect = 6.1e-24
Identity = 67/179 (37.43%), Postives = 107/179 (59.78%), Query Frame = 1 

Query: 4   KVVALIGVGLRIFIFLCLLIALVVIATDKLALIDGF----KATFNDVQGYRYVLSVAIIG 63
           + + +  + LRI  F+ L +A VV+ TDK+   D F    + TF D++ YRYVL+ ++IG
Sbjct: 5   RAIPIATILLRILTFILLAVATVVLVTDKVKSKDVFGNTSEITFKDIRAYRYVLAASVIG 64

Query: 64  LAHTILQLGFSIYHVITQNIPFWNG-LPLFNYYADQVITWVLATAVGAGFAVTAELKRFV 123
            A+T++Q+ F++Y V T      N  LP F++Y D++I++ LATAVG GF VT ELK+ +
Sbjct: 65  CAYTLIQIPFAVYWVATSKRMIHNDCLPNFDFYGDKIISFFLATAVGVGFGVTVELKKLL 124

Query: 124 DSRIDRELGDYGFFSPQVDEQKSLIDEFFDKAYIATAILFLAFLSMATLLLLSPFNRIK 178
           +  ++        FS   +   S +++FF+ A++ T  LFL  + M  L +LS FN  K
Sbjct: 125 NDFVEA-------FSLGGEGGDSKLNKFFNVAHVTTGFLFLGLICMVILSILSSFNLAK 176

The following BLAST results are available for this feature:
BLAST of Cla018660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CSPLC_SORBI7.2e-1735.63CASP-like protein 4D1 OS=Sorghum bicolor GN=Sb05g021340 PE=2 SV=1[more]
CSPLE_RICCO7.2e-1732.18CASP-like protein 4D1 OS=Ricinus communis GN=RCOM_1206790 PE=3 SV=1[more]
CSPLK_ARALL2.1e-1633.71CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_903205 P... [more]
CSPLC_ARATH1.0e-1534.09CASP-like protein 4D1 OS=Arabidopsis thaliana GN=At2g39530 PE=2 SV=1[more]
CSPLB_ARATH1.0e-1532.02CASP-like protein 4D2 OS=Arabidopsis thaliana GN=At2g39518 PE=2 SV=1[more]
BLAST of Cla018660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LSG6_CUCSA4.4e-9080.38CASP-like protein OS=Cucumis sativus GN=Csa_1G029610 PE=3 SV=1[more]
A0A061FVH2_THECC1.9e-2442.61CASP-like protein OS=Theobroma cacao GN=TCM_013291 PE=3 SV=1[more]
A5B0Q9_VITVI6.1e-2338.86CASP-like protein OS=Vitis vinifera GN=VITISV_001156 PE=3 SV=1[more]
B9I4V9_POPTR4.0e-2238.25CASP-like protein OS=Populus trichocarpa GN=POPTR_0012s03720g PE=3 SV=1[more]
M5WL71_PRUPE6.8e-2239.63CASP-like protein OS=Prunus persica GN=PRUPE_ppa024180mg PE=3 SV=1[more]
BLAST of Cla018660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066253|ref|XP_008454028.1|8.9e-9284.13PREDICTED: CASP-like protein RCOM_1206790 [Cucumis melo][more]
gi|778656667|ref|XP_011649480.1|6.4e-9080.38PREDICTED: CASP-like protein 4D2 [Cucumis sativus][more]
gi|769805653|ref|XP_011625256.1|5.0e-2640.23PREDICTED: CASP-like protein 4D1 [Amborella trichopoda][more]
gi|590666713|ref|XP_007037039.1|2.7e-2442.61UPF0497 membrane protein, putative [Theobroma cacao][more]
gi|769805965|ref|XP_006849475.2|6.1e-2437.43PREDICTED: CASP-like protein 4D1 [Amborella trichopoda][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006702CASP_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU52854watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla018660Cla018660.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU52854WMU52854transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006702Domain of unknown function DUF588PFAMPF04535DUF588coord: 6..128
score: 2.0
NoneNo IPR availablePANTHERPTHR33573FAMILY NOT NAMEDcoord: 5..120
score: 1.5E-40coord: 141..180
score: 1.5