Csa7G441620 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G441620
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 17599801 .. 17599983 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCAGCAATATGGGAATGAAATGTGCTTTAACTGCTTGGCTATTCCTGAGCTTGCTCTCCATGGCCAATTCTTATACCTCTTTCCAAGACTGTTACGGCACCTGCGTCGTCACCTGCGCCGTCACACCCGGCATTCCTGTCTCCGAATGCCTCAAGAGATGCTTCAAAACTTGCTGA

mRNA sequence

ATGGAGAGCAGCAATATGGGAATGAAATGTGCTTTAACTGCTTGGCTATTCCTGAGCTTGCTCTCCATGGCCAATTCTTATACCTCTTTCCAAGACTGTTACGGCACCTGCGTCGTCACCTGCGCCGTCACACCCGGCATTCCTGTCTCCGAATGCCTCAAGAGATGCTTCAAAACTTGCTGA

Coding sequence (CDS)

ATGGAGAGCAGCAATATGGGAATGAAATGTGCTTTAACTGCTTGGCTATTCCTGAGCTTGCTCTCCATGGCCAATTCTTATACCTCTTTCCAAGACTGTTACGGCACCTGCGTCGTCACCTGCGCCGTCACACCCGGCATTCCTGTCTCCGAATGCCTCAAGAGATGCTTCAAAACTTGCTGA

Protein sequence

MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC*
Homology
[Close]
BLAST of Csa7G441620 vs. TrEMBL
Match: A0A0A0KAC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G441620 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 3.9e-28
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 1  MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 60
          MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC
Sbjct: 1  MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 60

[Close]
BLAST of Csa7G441620 vs. TrEMBL
Match: A0A0A0K781_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G441625 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.0e-09
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 1 

Query: 6  MGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          +  K AL AWL L+ LS ANS TSFQ+CY TC V CA+TPG+  S+C  RC + C
Sbjct: 5  LAKKWALMAWLLLTSLSTANS-TSFQECYATCFVICAITPGVAFSDCPLRCLQAC 58

[Close]
BLAST of Csa7G441620 vs. NCBI nr
Match: gi|700190109|gb|KGN45342.1| (hypothetical protein Csa_7G441620 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 5.6e-28
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 1 

Query: 1  MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 60
          MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC
Sbjct: 1  MESSNMGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 60

[Close]
BLAST of Csa7G441620 vs. NCBI nr
Match: gi|659122243|ref|XP_008461039.1| (PREDICTED: thionin-like protein 2 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 5.8e-09
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 1 

Query: 6  MGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          +  K AL AWL L+ LS ANS TSFQ+CY TC V CA+TPG+  S+C  RC + C
Sbjct: 5  LAKKWALMAWLLLTSLSTANS-TSFQECYATCFVICAITPGVAFSDCPLRCLQAC 58

[Close]
BLAST of Csa7G441620 vs. NCBI nr
Match: gi|778729254|ref|XP_011659556.1| (PREDICTED: thionin-like protein 2 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 5.8e-09
Identity = 31/55 (56.36%), Postives = 38/55 (69.09%), Query Frame = 1 

Query: 6  MGMKCALTAWLFLSLLSMANSYTSFQDCYGTCVVTCAVTPGIPVSECLKRCFKTC 61
          +  K AL AWL L+ LS ANS TSFQ+CY TC V CA+TPG+  S+C  RC + C
Sbjct: 5  LAKKWALMAWLLLTSLSTANS-TSFQECYATCFVICAITPGVAFSDCPLRCLQAC 58

The following BLAST results are available for this feature:
BLAST of Csa7G441620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAC5_CUCSA3.9e-28100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G441620 PE=4 SV=1[more]
A0A0A0K781_CUCSA4.0e-0956.36Uncharacterized protein OS=Cucumis sativus GN=Csa_7G441625 PE=4 SV=1[more]
BLAST of Csa7G441620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190109|gb|KGN45342.1|5.6e-28100.00hypothetical protein Csa_7G441620 [Cucumis sativus][more]
gi|659122243|ref|XP_008461039.1|5.8e-0956.36PREDICTED: thionin-like protein 2 [Cucumis melo][more]
gi|778729254|ref|XP_011659556.1|5.8e-0956.36PREDICTED: thionin-like protein 2 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G441620.1Csa7G441620.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa7G441620Cla015423Watermelon (97103) v1cuwmB566
Csa7G441620MELO3C023361Melon (DHL92) v3.5.1cumeB521
Csa7G441620Lsi02G027670Bottle gourd (USVL1VR-Ls)culsiB503
Csa7G441620MELO3C023361.2Melon (DHL92) v3.6.1cumedB501
Csa7G441620Bhi09G000099Wax gourdcuwgoB690
Csa7G441620CsGy7G019480Cucumber (Gy14) v2cgybcuB323
Csa7G441620Carg09546Silver-seed gourdcarcuB1041
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa7G441620Cucumber (Gy14) v2cgybcuB154
Csa7G441620Melon (DHL92) v3.6.1cumedB529
Csa7G441620Silver-seed gourdcarcuB0143
Csa7G441620Silver-seed gourdcarcuB0130
Csa7G441620Silver-seed gourdcarcuB0229
Csa7G441620Watermelon (97103) v2cuwmbB548
Csa7G441620Watermelon (97103) v2cuwmbB570
Csa7G441620Wax gourdcuwgoB660
Csa7G441620Wax gourdcuwgoB712
Csa7G441620Cucurbita maxima (Rimu)cmacuB081
Csa7G441620Cucurbita maxima (Rimu)cmacuB150
Csa7G441620Cucurbita maxima (Rimu)cmacuB275
Csa7G441620Cucurbita maxima (Rimu)cmacuB388
Csa7G441620Cucurbita maxima (Rimu)cmacuB497
Csa7G441620Cucurbita moschata (Rifu)cmocuB072
Csa7G441620Cucurbita moschata (Rifu)cmocuB136
Csa7G441620Cucurbita moschata (Rifu)cmocuB263
Csa7G441620Cucurbita moschata (Rifu)cmocuB378
Csa7G441620Cucurbita moschata (Rifu)cmocuB486
Csa7G441620Cucurbita moschata (Rifu)cmocuB901
Csa7G441620Melon (DHL92) v3.5.1cumeB552
Csa7G441620Watermelon (Charleston Gray)cuwcgB524
Csa7G441620Watermelon (Charleston Gray)cuwcgB564
Csa7G441620Watermelon (97103) v1cuwmB585
Csa7G441620Cucurbita pepo (Zucchini)cpecuB161
Csa7G441620Cucurbita pepo (Zucchini)cpecuB378
Csa7G441620Cucurbita pepo (Zucchini)cpecuB588
Csa7G441620Cucurbita pepo (Zucchini)cpecuB700
Csa7G441620Bottle gourd (USVL1VR-Ls)culsiB532