Carg09546 (gene) Silver-seed gourd

Overview
NameCarg09546
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionthionin-like protein 2
LocationCucurbita_argyrosperma_scaffold_029 : 744981 .. 748992 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGCTGCAAGGCAAAACTGGGTTTAATGGCGTGGCTGGTGCTGAGCTCATTAACGACGGCGAATTCCACCTCTTTTCAAGAATGCTACGCCACCTGCTTCGTCATATGCGCCATCACGCCCGGCGTCGCCTTCTCCGACTGCCCATTGAGATGCCTCCAAGCCTGCATTATCCCATCTTTTCCTATCCACAACGCCGCCGCCGACGACGACGTCCACCGGCAACAAAAGAACCAGTTCTTCTGCGAGCTCGGCTGCGCCGCCTCCTCGTGTACCAAGTTCAGCACCCACCAAAACCCAGGTTCTAAAAATTAATAATTTAAACCTTTTTTTTTTCCCTAAATTTTATGAAAATTTATTGAAGTGTTCTTGGTTTTGTTGATGCAGCTGAAAAGAAAGTGGGAAGCTGCGTGGAATCGTGCTCTCGGACATGCTCCATGGATTGATCTTAGCCGACTCGTCTCTACAATGATATAATATTGTTTAGTTTCAGTATAAATTCTAGTGACTTTACTTTCAACTTTTACCAAGCCTCCAAGATGTATTACTTATTTATAAATTCATGATCATCTTCTAAATTAGCCAAATATGGGACAACAATTGTTGACTGGGGTTTCGATAGCAGTTGGACGGATCTAGGAACTAGGTGCCTTCTCAGATCTCGTGGTCTTGCCTATGTTAGATGAACACAACTCTCCACAATGGTATGATATTGTCTACTTTGAGCATAAGCTCTCATGTTGCTTTGGGTTTCTCCAAAAGGCCTCACCCCAATGGACTTTCCAATACCTCCCCTCGAACAAAGTACGTCTCCCTTTAATCGACCCTCGACTCCTTTGAAGTCTTCGTCATTTTTTACTGCCTTCGAGGAGGTTCGACATTTGAGGATTTAGATGGTTCTAATACCATGATAAATGAACACGACTCTCCACAATGTTATGATATTGTCCACTTTGAGTATAAGCTCTCATGGTTTTGCTTTGGGCTTCCCCAAAAGGCCTCTTCCGAATGGAGAGAGTATTTTTTGTTTATAAACTCAGGATCATTTCCTAAATTAGTCGGGACTTTCATCATCCAACCGCCTATAGGTCGTACTATTATTAAATAAATTGTTAATATGATAGAGAGGGTCACGGGATGGCATTATTATTATTATTTGATTGAACATAATTTTGGGTATATATGGCCCGTGAACTTTGTTTGTCAAATGCGGATAAAACCACGCACCATTATTTGAGGGCACCCATTTTCAAGCCATGCTTAGATCTAACACCTAATTATATCCCCTAATTATTTGGTTAACTACGCTCACTTACTACTAAACTATGTTTATGTCGGTAGATATGTCGAATATCTAATAAATAAGAAAAATTAAGGAAGTCACTAATGCGACCGTGCAAAAGATTAGGTTGACACTATTCATTGCACAGAGTCGACAAAAAAGTTATGCCAACTCTCCACTACCCTAGTGCAGTCAAGGCAGGCAAAGGTCGGTTAGGATAACGTAAGCTTCGATTTTGTGGAAATGGACAATCGTCTCCTGAATAGAGCCACAGTGTTGTAAACTCGTTCTTGAGAGGAAAGCGTGGGATCATGTCAAATAGCCTAGCCAGCCGGACAGGACACGACGGATCACATCCCCAAATTGTAGGTGTGGTTCTGAGGGATTAGCCTATAACAAGTTGCCAAGTTTAGAGATCAGAATGGTTGTAGAACCTTTACAGACCCTAGGAGAAGACTTACGACAGAAACTCACTCAGAACATCAAGGCACCCAGATGCTTAGATAACACCAAAGGTTAAACCTCAAACTTCCTTCAGCCCAAAGAAAAACCTCGGAGAATTTGATAGATAAGAATGCAATGAGAGTCTACGAGTAGGTATTTACTTGATATATTTATATACTCGTTCTTCTCTACATCTCCTTTTTTAGGTGAATGATGCTGCCGGTGAAGGTAAGGGAGTGCTTAGTAGCTTTGCTGCCACTAAGGGATGTCGACCTAAGGGTCTGTCATGTCTGCATCTTATAGTTGTCATATCATCCTTTTCAGTAACTCGATCTCATTCCGAATTTTTCATTGATTTCATTCATACATGTTTTCACTGCATAATCAGTTGGTCCCGATCTAGTTTAAAGCTTCAAAAATTGAGCCGTGACAGTATATTTGATCCCTCTTTAAAAAAAATAGATTGCAATATAAAATCAAACCGATCAATTTGTTTGACGCTTATGACACAATTTTTTCAATTTTATGTTCACCGTTCAAAATGTAGCATGATAAATTAAAAATCAATTAAAACAAAATGAAAAGACACAACTAAACTTTGGTGGACACAAACACTATGGAACCCAAATAGTGAGCCATTGTACTTAGGATGGTGAGTGACGTATGTTCACTAGAACCTACACAATCATTTTAATCCATTTTTATAATTAGTGTTGTATCTTCCTAAATATCTCAGATATTTAAACCCCCGAACATATATTAGATTCACGAGTCATTTTTAACATGCTTCGTACAACATAGAACAAGTAGTTTAGCTCTAACCAAAAATTTTAAAATGTCAATTAGGTCCAACCGGAGAATAGGCACACTGACTCTATATCAATCACGGCACACGTTATCAATGGTATCAGAGCCAAACACCGGGCGGTATGCAAATCAGGACGCTAGCCCTCATATATTTTAGGAAAATGGATTGTGAGACCCCACATCGGTTTGAATGGTCTGTTACGGGTGAGAATGGTATCAGAGCCTCTCTCTAACAGACACATTTTAAAATCATGGAACTAATGGAATACGTAACAAGTCAAAACGGATAATATATGCTAGCGGTGGACAAAATGATATCAGAGGACGGTATGCAAATCAGGACGCTAGCCCTCAAGGGGGTGGATTGTGAGAACCCCACATCGGTTGAAAGAGGGTTACGAAACATTGTATTATAACCAAGTGTGGCAAATGACCGCTAGCCTAAAAGGGGGTGCATTGTAAGAAACATCGTTGAGGGGGGCGACAATAAAGTAATACTCTCTAAAAAACACATTTTAAAACCGTGAGGCTGGCGACAATACGTAATAGGCCAAAACGGACATTATCTACTATACACAAGATTTTCATAATACCAAGCAGTCTCAAGTAGTATTATACAGAGTATCATGTAATCTCTACTCAATTGATCTTAAAAAAAAGTGTGAGTCTTTTTCACAAATACTTGTGTTCAACAAAACATCCACGTGTGTAAATGAGTGAATGGTATAATAATGTTTAGCCCACTTCACAAACGTGGTTCATTCATGGCTATTTAAGAACAACATAAAACTCTCATCTCAACTCATCTCATCTCATCTCCAACAACTCAAAAAGACAACCCAAAGCCAAGTTTCCAAGAAGTTTGGAAGAGAATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCCCCAATTGCTACTTCGGCTGCATTAATAGCTGCTTAGAGAGTGCCTTCCAGTGCGCTATTTGCATTGGAAAGTGCATGATAAGCGTCGAGTCCACCCCGATGCAGGCCAACCATATGGACAATCGTTACTTCTGCAAGCTTGGGTGTTCCACTTCTCGCTGCGCCAAGCTCCTCCTTAACCATCCAAGTGAGCATAATTCTTAATTTCCTCAAAATTGGAGTTTTTTATTTTTTATTTTTTATTTTTTATTTACGTATTTTCTTTGTTTTGAACGTTGCAGATGAGAAGCAAATGAAAGGCTGTGTCAACTCGTGCTCGCATACATGCACGAACATTATGAACTAATAAGACCGACATGACATGACATGACGAGCTAAACTTGGCTTATTGATACTAGGAATAAATAAACAAATGTCAATTTTGGTGTTACAAATCCAAATTGATTATAAGTTATGTCGTGTATTAAAGTTTGTGTCTACATCCATCAATAATATGTGAAATAAATAACGTTGCTTACGTGAG

mRNA sequence

ATGGAGAGCTGCAAGGCAAAACTGGGTTTAATGGCGTGGCTGGTGCTGAGCTCATTAACGACGGCGAATTCCACCTCTTTTCAAGAATGCTACGCCACCTGCTTCGTCATATGCGCCATCACGCCCGGCGTCGCCTTCTCCGACTGCCCATTGAGATGCCTCCAAGCCTGCATTATCCCATCTTTTCCTATCCACAACGCCGCCGCCGACGACGACGTCCACCGGCAACAAAAGAACCAGTTCTTCTGCGAGCTCGGCTGCGCCGCCTCCTCGTGTACCAAGTTCAGCACCCACCAAAACCCAGACAACCCAAAGCCAAGTTTCCAAGAAGTTTGGAAGAGAATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCCCCAATTGCTACTTCGGCTGCATTAATAGCTGCTTAGAGAGTGCCTTCCAGTGCGCTATTTGCATTGGAAAGTGCATGATAAGCGTCGAGTCCACCCCGATGCAGGCCAACCATATGGACAATCGTTACTTCTGCAAGCTTGGGTGTTCCACTTCTCGCTGCGCCAAGCTCCTCCTTAACCATCCAAATGAGAAGCAAATGAAAGGCTGTGTCAACTCGTGCTCGCATACATGCACGAACATTATGAACTAATAAGACCGACATGACATGACATGACGAGCTAAACTTGGCTTATTGATACTAGGAATAAATAAACAAATGTCAATTTTGGTGTTACAAATCCAAATTGATTATAAGTTATGTCGTGTATTAAAGTTTGTGTCTACATCCATCAATAATATGTGAAATAAATAACGTTGCTTACGTGAG

Coding sequence (CDS)

ATGGAGAGCTGCAAGGCAAAACTGGGTTTAATGGCGTGGCTGGTGCTGAGCTCATTAACGACGGCGAATTCCACCTCTTTTCAAGAATGCTACGCCACCTGCTTCGTCATATGCGCCATCACGCCCGGCGTCGCCTTCTCCGACTGCCCATTGAGATGCCTCCAAGCCTGCATTATCCCATCTTTTCCTATCCACAACGCCGCCGCCGACGACGACGTCCACCGGCAACAAAAGAACCAGTTCTTCTGCGAGCTCGGCTGCGCCGCCTCCTCGTGTACCAAGTTCAGCACCCACCAAAACCCAGACAACCCAAAGCCAAGTTTCCAAGAAGTTTGGAAGAGAATGAAGACAGTTCTGGTAGCTTGCTTGGTTCTAAGCTTTGTGGTCGTAGGGATCTCCGAACCCACAGAATATGTCGGCGGCCCCAATTGCTACTTCGGCTGCATTAATAGCTGCTTAGAGAGTGCCTTCCAGTGCGCTATTTGCATTGGAAAGTGCATGATAAGCGTCGAGTCCACCCCGATGCAGGCCAACCATATGGACAATCGTTACTTCTGCAAGCTTGGGTGTTCCACTTCTCGCTGCGCCAAGCTCCTCCTTAACCATCCAAATGAGAAGCAAATGAAAGGCTGTGTCAACTCGTGCTCGCATACATGCACGAACATTATGAACTAA

Protein sequence

MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPDNPKPSFQEVWKRMKTVLVACLVLSFVVVGISEPTEYVGGPNCYFGCINSCLESAFQCAICIGKCMISVESTPMQANHMDNRYFCKLGCSTSRCAKLLLNHPNEKQMKGCVNSCSHTCTNIMN
Homology
[Close]
BLAST of Carg09546 vs. NCBI nr
Match: XP_022953260.1 (thionin-like protein 2 [Cucurbita moschata] >XP_022953261.1 thionin-like protein 2 [Cucurbita moschata])

HSP 1 Score: 215.7 bits (548), Expect = 1.6e-52
Identity = 102/105 (97.14%), Postives = 102/105 (97.14%), Query Frame = 0 

Query: 1   MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIP 60
           MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIP
Sbjct: 1   MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIP 60

Query: 61  SFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPDNPK 106
           SFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNP   K
Sbjct: 61  SFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPAEKK 105

[Close]
BLAST of Carg09546 vs. NCBI nr
Match: XP_023547567.1 (thionin-like protein 2 [Cucurbita pepo subsp. pepo] >XP_023547568.1 thionin-like protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.1 bits (523), Expect = 1.3e-49
Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0 

Query: 1   MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIP 60
           MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIP
Sbjct: 1   MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIP 60

Query: 61  SFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNP 102
           SFPIHNAAA DDVHRQQKNQFFCELGCA SSCTKFSTHQNP
Sbjct: 61  SFPIHNAAA-DDVHRQQKNQFFCELGCATSSCTKFSTHQNP 100

[Close]
BLAST of Carg09546 vs. NCBI nr
Match: XP_022992447.1 (thionin-like protein 2 [Cucurbita maxima] >XP_022992448.1 thionin-like protein 2 [Cucurbita maxima])

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-48
Identity = 98/105 (93.33%), Postives = 100/105 (95.24%), Query Frame = 0 

Query: 1   MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIP 60
           MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCF+ICAITPGVAFSDCPLRCLQACIIP
Sbjct: 1   MESCKAKLGLMAWLVLSSLTTANSTSFQECYATCFLICAITPGVAFSDCPLRCLQACIIP 60

Query: 61  SFPIHNAAADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPDNPK 106
           SFPIHNAAA DDVHRQQKNQFFCELGCAASSCTKFST +NP   K
Sbjct: 61  SFPIHNAAA-DDVHRQQKNQFFCELGCAASSCTKFSTQKNPAEKK 104

[Close]
BLAST of Carg09546 vs. NCBI nr
Match: XP_011659556.1 (PREDICTED: thionin-like protein 2 [Cucumis sativus] >KGN45343.1 hypothetical protein Csa_7G441625 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 1.3e-22
Identity = 62/100 (62.00%), Postives = 69/100 (69.00%), Query Frame = 0 

Query: 7   KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHN 66
           K  LMAWL+L+SL+T                  ITPGVAFSDCPLRCLQACI+PSFPI +
Sbjct: 8   KWALMAWLLLTSLSTXXXXXXXXXXXXXXXXXXITPGVAFSDCPLRCLQACIVPSFPIDD 67

Query: 67  AAADDDVHR-QQKNQFFCELGCAASSCTKFSTHQNPDNPK 106
           A   D VHR QQ+N FFC+LGCAASSCTKFST QNP   K
Sbjct: 68  A---DVVHRQQQQNHFFCKLGCAASSCTKFSTKQNPGERK 104

[Close]
BLAST of Carg09546 vs. NCBI nr
Match: XP_022146010.1 (thionin-like protein 2 [Momordica charantia])

HSP 1 Score: 114.4 bits (285), Expect = 5.0e-22
Identity = 63/111 (56.76%), Postives = 73/111 (65.77%), Query Frame = 0 

Query: 1   MESCKAKLGL---MAWLVL--SSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQ 60
           ME+ + K GL   M WLV+  S +TTA STSFQECYATCFVICAITPG           Q
Sbjct: 1   MENRRGKWGLSTVMVWLVVVSSVMTTAESTSFQECYATCFVICAITPGAXXXXXXXXXXQ 60

Query: 61  ACIIPSFPIHNAAAD-DDVHRQQKNQFFCELGCAASSCTKFSTHQNPDNPK 106
           ACIIPSFPI +AAA      R+  N FFC+LGCAA+ CT F+T+ NP   K
Sbjct: 61  ACIIPSFPIDDAAATATAADRRTHNHFFCKLGCAATLCTNFTTNHNPAEKK 111

[Close]
BLAST of Carg09546 vs. TrEMBL
Match: tr|A0A0A0K781|A0A0A0K781_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441625 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.8e-23
Identity = 62/100 (62.00%), Postives = 69/100 (69.00%), Query Frame = 0 

Query: 7   KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHN 66
           K  LMAWL+L+SL+T                  ITPGVAFSDCPLRCLQACI+PSFPI +
Sbjct: 8   KWALMAWLLLTSLSTXXXXXXXXXXXXXXXXXXITPGVAFSDCPLRCLQACIVPSFPIDD 67

Query: 67  AAADDDVHR-QQKNQFFCELGCAASSCTKFSTHQNPDNPK 106
           A   D VHR QQ+N FFC+LGCAASSCTKFST QNP   K
Sbjct: 68  A---DVVHRQQQQNHFFCKLGCAASSCTKFSTKQNPGERK 104

[Close]
BLAST of Carg09546 vs. TrEMBL
Match: tr|A0A1S3CDU4|A0A1S3CDU4_CUCME (thionin-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103499745 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.1e-20
Identity = 57/91 (62.64%), Postives = 64/91 (70.33%), Query Frame = 0 

Query: 7  KLGLMAWLVLSSLTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHN 66
          K  LMAWL+L+SL+T                  ITPGVAFSDCPLRCLQACI+PSFPI +
Sbjct: 8  KWALMAWLLLTSLSTXXXXXXXXXXXXXXXXXXITPGVAFSDCPLRCLQACIVPSFPIDD 67

Query: 67 AAADDDVHRQ-QKNQFFCELGCAASSCTKFS 97
             DD VHRQ Q+N FFC+LGCAASSCTKFS
Sbjct: 68 ---DDVVHRQKQQNHFFCKLGCAASSCTKFS 95

[Close]
BLAST of Carg09546 vs. TrEMBL
Match: tr|A0A1S3CDB8|A0A1S3CDB8_CUCME (beta-hordothionin-like OS=Cucumis melo OX=3656 GN=LOC103499744 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.4e-15
Identity = 48/127 (37.80%), Postives = 67/127 (52.76%), Query Frame = 0 

Query: 115 MKTVLVACLVLSFV------------VVGISEPTEYVGGPNCYFGC-INSCLESAFQCAI 174
           MK++ V CL+LS +                           CY  C +N C +  FQCA+
Sbjct: 1   MKSIFVLCLILSLLXXXXXXXXXXXXXXXXXXXXXXXXXXGCYISCLLNDCRKGVFQCAV 60

Query: 175 CIGKCMI--SVESTPMQANHMDNRYFCKLGCSTSRCAKLLL---NHPNEKQMKGCVNSCS 224
           C+GKC +  +  S   ++N MDN  FCK+GC+TS C K  L    H +EK++KGCV+SCS
Sbjct: 61  CLGKCAVVGAESSYSSRSNRMDNHDFCKIGCTTSLCTKFALPNNQHSDEKEVKGCVSSCS 120

[Close]
BLAST of Carg09546 vs. TrEMBL
Match: tr|A0A2P2LKX6|A0A2P2LKX6_RHIMU (Uncharacterized protein MANES_04G122400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 5.7e-14
Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 0 

Query: 10  LMAWLVLSSLTTANS--TSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNA 69
           LM   VL  L + NS  T+FQ+CYA CFV+CAITPG + S C  +CL+ CI PS P+   
Sbjct: 9   LMVVCVLLVLLSGNSIATTFQQCYAGCFVLCAITPGSSTSTCAFKCLKDCIFPSTPV--- 68

Query: 70  AADDDVHRQQKNQFFCELGCAASSCTKFSTHQNPDNPK 106
              +  +R++  Q FC+LGCA S+C   S+  NP   K
Sbjct: 69  ---ETNNREETQQQFCKLGCAFSTCANISSKYNPGGEK 100

[Close]
BLAST of Carg09546 vs. TrEMBL
Match: tr|A0A2P4NAQ7|A0A2P4NAQ7_QUESU (Thionin-like protein 2 OS=Quercus suber OX=58331 GN=CFP56_65716 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.4e-12
Identity = 40/83 (48.19%), Postives = 50/83 (60.24%), Query Frame = 0 

Query: 19  LTTANSTSFQECYATCFVICAITPGVAFSDCPLRCLQACIIPSFPIHNAAADDDVHRQQK 78
           L   ++ SFQ CY  CF++C ITP  +   CP +CL  CI PSFPI      D  HR   
Sbjct: 4   LVKESTASFQSCYQGCFILCIITPNQSAISCPFKCLIDCIKPSFPI------DFTHRD-- 63

Query: 79  NQFFCELGCAASSCTKFSTHQNP 102
           N +FC+LGCA+S CT FST + P
Sbjct: 64  NDYFCKLGCASSLCTNFSTKEFP 78

The following BLAST results are available for this feature:
BLAST of Carg09546 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022953260.11.6e-5297.14thionin-like protein 2 [Cucurbita moschata] >XP_022953261.1 thionin-like protein... [more]
XP_023547567.11.3e-4998.02thionin-like protein 2 [Cucurbita pepo subsp. pepo] >XP_023547568.1 thionin-like... [more]
XP_022992447.11.1e-4893.33thionin-like protein 2 [Cucurbita maxima] >XP_022992448.1 thionin-like protein 2... [more]
XP_011659556.11.3e-2262.00PREDICTED: thionin-like protein 2 [Cucumis sativus] >KGN45343.1 hypothetical pro... [more]
XP_022146010.15.0e-2256.76thionin-like protein 2 [Momordica charantia][more]
BLAST of Carg09546 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Carg09546 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg09546 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K781|A0A0A0K781_CUCSA8.8e-2362.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G441625 PE=4 SV=1[more]
tr|A0A1S3CDU4|A0A1S3CDU4_CUCME3.1e-2062.64thionin-like protein 2 OS=Cucumis melo OX=3656 GN=LOC103499745 PE=4 SV=1[more]
tr|A0A1S3CDB8|A0A1S3CDB8_CUCME1.4e-1537.80beta-hordothionin-like OS=Cucumis melo OX=3656 GN=LOC103499744 PE=4 SV=1[more]
tr|A0A2P2LKX6|A0A2P2LKX6_RHIMU5.7e-1445.92Uncharacterized protein MANES_04G122400 OS=Rhizophora mucronata OX=61149 PE=4 SV... [more]
tr|A0A2P4NAQ7|A0A2P4NAQ7_QUESU1.4e-1248.19Thionin-like protein 2 OS=Quercus suber OX=58331 GN=CFP56_65716 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR038975THNL
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09546-RACarg09546-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36312:SF1THIONIN-LIKE PROTEIN 1-RELATEDcoord: 116..221
NoneNo IPR availablePANTHERPTHR36312:SF1THIONIN-LIKE PROTEIN 1-RELATEDcoord: 10..105
IPR038975Thionin-like proteinPANTHERPTHR36312FAMILY NOT NAMEDcoord: 10..105
IPR038975Thionin-like proteinPANTHERPTHR36312FAMILY NOT NAMEDcoord: 116..221

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09546Csa7G441620Cucumber (Chinese Long) v2carcuB1041
Carg09546MELO3C023363Melon (DHL92) v3.5.1carmeB0996
Carg09546CsGy7G019480Cucumber (Gy14) v2carcgybB1011
Carg09546MELO3C023363.2Melon (DHL92) v3.6.1carmedB1008
Carg09546CsaV3_7G033050Cucumber (Chinese Long) v3carcucB1074
Carg09546Cla97C09G164380Watermelon (97103) v2carwmbB1089
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg09546Cucumber (Gy14) v2carcgybB1009
Carg09546Cucurbita maxima (Rimu)carcmaB1418
Carg09546Cucurbita maxima (Rimu)carcmaB1419
Carg09546Cucurbita maxima (Rimu)carcmaB1420
Carg09546Cucurbita maxima (Rimu)carcmaB1424
Carg09546Cucurbita moschata (Rifu)carcmoB1374
Carg09546Cucurbita moschata (Rifu)carcmoB1375
Carg09546Cucurbita moschata (Rifu)carcmoB1376
Carg09546Cucurbita moschata (Rifu)carcmoB1377
Carg09546Cucurbita moschata (Rifu)carcmoB1379
Carg09546Cucurbita pepo (Zucchini)carcpeB1424
Carg09546Cucurbita pepo (Zucchini)carcpeB1425
Carg09546Cucurbita pepo (Zucchini)carcpeB1429
Carg09546Wild cucumber (PI 183967)carcpiB1062
Carg09546Wild cucumber (PI 183967)carcpiB1064
Carg09546Cucumber (Chinese Long) v3carcucB1072
Carg09546Bottle gourd (USVL1VR-Ls)carlsiB937
Carg09546Bottle gourd (USVL1VR-Ls)carlsiB939
Carg09546Melon (DHL92) v3.5.1carmeB0997
Carg09546Melon (DHL92) v3.6.1carmedB1009
Carg09546Watermelon (Charleston Gray)carwcgB1001
Carg09546Watermelon (Charleston Gray)carwcgB1004
Carg09546Watermelon (97103) v1carwmB1028
Carg09546Watermelon (97103) v1carwmB1031
Carg09546Watermelon (97103) v2carwmbB1088
Carg09546Wax gourdcarwgoB1201
Carg09546Wax gourdcarwgoB1204
Carg09546Silver-seed gourdcarcarB047
Carg09546Silver-seed gourdcarcarB145
Carg09546Silver-seed gourdcarcarB240
Carg09546Silver-seed gourdcarcarB596