Csa7G298770 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa7G298770
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr7 : 10445661 .. 10445975 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAAAAACCAACAGTGGATTGAAGATTGATGATGTCTTGGACACGAAGAAATCATTTGTACAGTGCATTGGAGGCAGCAATGTTTCGATCGGAGTTGGAAACCGTACAAGAAAGATGAACAATCCGAGGAGACATATAAGGAAGAATATCAGACTGGTGAACTCGCGGTCAACAGAGCGAAAAGGAGAGAAGGCTCGTTACGGAGAAGACCATTTGTGGGAAGGTGCAGAGCAAGGGTCGTGGCAGTGGCTCAATCAAAGGGGTAAATTGAATAGAGAAGATGAAAAAGAAGAAGTTGAAGGAGCTTAA

mRNA sequence

ATGGAAAAAAAAACCAACAGTGGATTGAAGATTGATGATGTCTTGGACACGAAGAAATCATTTGTACAGTGCATTGGAGGCAGCAATGTTTCGATCGGAGTTGGAAACCGTACAAGAAAGATGAACAATCCGAGGAGACATATAAGGAAGAATATCAGACTGGTGAACTCGCGGTCAACAGAGCGAAAAGGAGAGAAGGCTCGTTACGGAGAAGACCATTTGTGGGAAGGTGCAGAGCAAGGGTCGTGGCAGTGGCTCAATCAAAGGGGTAAATTGAATAGAGAAGATGAAAAAGAAGAAGTTGAAGGAGCTTAA

Coding sequence (CDS)

ATGGAAAAAAAAACCAACAGTGGATTGAAGATTGATGATGTCTTGGACACGAAGAAATCATTTGTACAGTGCATTGGAGGCAGCAATGTTTCGATCGGAGTTGGAAACCGTACAAGAAAGATGAACAATCCGAGGAGACATATAAGGAAGAATATCAGACTGGTGAACTCGCGGTCAACAGAGCGAAAAGGAGAGAAGGCTCGTTACGGAGAAGACCATTTGTGGGAAGGTGCAGAGCAAGGGTCGTGGCAGTGGCTCAATCAAAGGGGTAAATTGAATAGAGAAGATGAAAAAGAAGAAGTTGAAGGAGCTTAA

Protein sequence

MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRSTERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA*
Homology
[Close]
BLAST of Csa7G298770 vs. TrEMBL
Match: A0A0A0K9H3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298770 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.2e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 1   MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 60
           MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST
Sbjct: 1   MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 60

Query: 61  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA 105
           ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA
Sbjct: 61  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA 104

[Close]
BLAST of Csa7G298770 vs. TrEMBL
Match: A0A0A0KVV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G123330 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.2e-14
Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 1 

Query: 1  MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKM-NNPRRHIRKNIRLVNSRS 60
          ME KTNSGLK DD LD KK FVQC GG ++SIGVGN+TRKM N PRR  RK   LVNS S
Sbjct: 15 MEIKTNSGLKNDDALDMKKLFVQCNGGGSISIGVGNQTRKMKNKPRRKRRKKNPLVNSWS 74

Query: 61 TERKGE 66
          T RKGE
Sbjct: 75 TGRKGE 80

[Close]
BLAST of Csa7G298770 vs. NCBI nr
Match: gi|700189228|gb|KGN44461.1| (hypothetical protein Csa_7G298770 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 1.7e-53
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 1   MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 60
           MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST
Sbjct: 1   MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 60

Query: 61  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA 105
           ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA
Sbjct: 61  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA 104

[Close]
BLAST of Csa7G298770 vs. NCBI nr
Match: gi|700198602|gb|KGN53760.1| (hypothetical protein Csa_4G123330 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 4.6e-14
Identity = 47/66 (71.21%), Postives = 50/66 (75.76%), Query Frame = 1 

Query: 1  MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKM-NNPRRHIRKNIRLVNSRS 60
          ME KTNSGLK DD LD KK FVQC GG ++SIGVGN+TRKM N PRR  RK   LVNS S
Sbjct: 15 MEIKTNSGLKNDDALDMKKLFVQCNGGGSISIGVGNQTRKMKNKPRRKRRKKNPLVNSWS 74

Query: 61 TERKGE 66
          T RKGE
Sbjct: 75 TGRKGE 80

The following BLAST results are available for this feature:
BLAST of Csa7G298770 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9H3_CUCSA1.2e-53100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298770 PE=4 SV=1[more]
A0A0A0KVV7_CUCSA3.2e-1471.21Uncharacterized protein OS=Cucumis sativus GN=Csa_4G123330 PE=4 SV=1[more]
BLAST of Csa7G298770 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189228|gb|KGN44461.1|1.7e-53100.00hypothetical protein Csa_7G298770 [Cucumis sativus][more]
gi|700198602|gb|KGN53760.1|4.6e-1471.21hypothetical protein Csa_4G123330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU095727cucumber EST collection version 3.0transcribed_cluster
CU139370cucumber EST collection version 3.0transcribed_cluster
CU144595cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G298770.1Csa7G298770.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU095727CU095727transcribed_cluster
CU144595CU144595transcribed_cluster
CU139370CU139370transcribed_cluster