CSPI07G12530 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G12530
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr7 : 10845891 .. 10847094 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAAAGGATCGGATGGAGACCAATGAGAAGGAAATTTCAGGGATGAAAGAAATCATATGGGGTCTCTGCAAAAGTATTGAAAAACTTAGGGAGGAAGTGTGAGAGAGTAACCCTGTGTCAGTGAATTGAAGAATTAGGAACTTCAGATGACACTCGAATGAAACATTAAGAGAAAATGGAAGAAGCAGGTGGGTCATGGGTTCAAGTGTTAAAGTGGAGTAAGGATTACAACTGAGAATTGGAAGAACAAGGAGAAACTCCATGGACATGGGGGTGAGCCAGTGGACTGCAGAGAACAGTCACAAAATGGTGGAAGAAAGTGCAAGAAAATCCGATAGATGAGACTGTCGAGTATGAAATGGAAAAAAAACCCAACAGTGGATTGAAGATTGATGATGTCTTGGACACGAAGAAATCATTTGTACAGTGCATTGGAGGCAGCAATGTTTCGATCGGAGTTGGAAACCGTACAAGAAAGATGAACAATCCGAGGAGACATATAAGGAAGAATATCAGACTGGTGAACTCGCGGTCAACAGAGCGAAAAGGAGAGAAGGCTCGTTACGGAGAAGACCATTTGTGGGAAGGTGCAGAGCAAGGGTCGTGGCAGTGGCTCAATCAAAGGGGTAAATTGAATAGAGAAGATGAAAAAGAAGAAGTTGAAGGAGCTTAAGTTCATGGATCGATGAATGAAGAAATGTTGGTGGCTTAAAGCTAAGAAGAACGGTTGGCCTCAATGGAAGAAGGAAATATCAAGTCGCAGCGGATGGAAGATGGAAAGGCGGAGAAAAGAAAGTACACCGGCAGCCAGATGGTCTAAGAATCGAGGTGGAAATGAACAAAAGATGGTCACCGGTGGCCCAAGGAAGATGTATGCCTTGATAATTGCCAAAGGACAGTGGCTTGCAATGAAAAAAGAAGAGATAGATGAGTCATGAGTTTGAATGGCAAAGAGATTGGCAGGCGAAATCTGCGGTGACCACGCTGTAGAAGAGAATCAAAAGTCAATGAGAACGGAAGTGCTGGTTATGGCTGTTGAGGTCGAGTTACGACGGTTGGAGGCATTGAAAATGGCAGAAGACGTGGATCTTTGTTGGATCAAGAAGATGGGAAAAGGGGTGATTTGTGTGATAGATGGGGACGATCAACTTGTCAAAATCTGGGGGCAAGGGGAGAGGAAATGAGCATCGACAAAAATGCGAG

mRNA sequence

ATGGAAAAAAAACCCAACAGTGGATTGAAGATTGATGATGTCTTGGACACGAAGAAATCATTTGTACAGTGCATTGGAGGCAGCAATGTTTCGATCGGAGTTGGAAACCGTACAAGAAAGATGAACAATCCGAGGAGACATATAAGGAAGAATATCAGACTGGTGAACTCGCGGTCAACAGAGCGAAAAGGAGAGAAGGCTCGTTACGGAGAAGACCATTTGTGGGAAGGTGCAGAGCAAGGGTCGTGGCAGTGGCTCAATCAAAGGGGTAAATTGAATAGAGAAGATGAAAAAGAAGAAGTTGAAGGAGCTTAA

Coding sequence (CDS)

ATGGAAAAAAAACCCAACAGTGGATTGAAGATTGATGATGTCTTGGACACGAAGAAATCATTTGTACAGTGCATTGGAGGCAGCAATGTTTCGATCGGAGTTGGAAACCGTACAAGAAAGATGAACAATCCGAGGAGACATATAAGGAAGAATATCAGACTGGTGAACTCGCGGTCAACAGAGCGAAAAGGAGAGAAGGCTCGTTACGGAGAAGACCATTTGTGGGAAGGTGCAGAGCAAGGGTCGTGGCAGTGGCTCAATCAAAGGGGTAAATTGAATAGAGAAGATGAAAAAGAAGAAGTTGAAGGAGCTTAA
Homology
[Close]
BLAST of CSPI07G12530 vs. TrEMBL
Match: A0A0A0K9H3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298770 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.6e-51
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 1 

Query: 1   MEKKPNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 60
           MEKK NSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST
Sbjct: 1   MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 60

Query: 61  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA 105
           ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA
Sbjct: 61  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA 104

[Close]
BLAST of CSPI07G12530 vs. TrEMBL
Match: A0A0A0KVV7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G123330 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-12
Identity = 46/66 (69.70%), Postives = 49/66 (74.24%), Query Frame = 1 

Query: 1  MEKKPNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKM-NNPRRHIRKNIRLVNSRS 60
          ME K NSGLK DD LD KK FVQC GG ++SIGVGN+TRKM N PRR  RK   LVNS S
Sbjct: 15 MEIKTNSGLKNDDALDMKKLFVQCNGGGSISIGVGNQTRKMKNKPRRKRRKKNPLVNSWS 74

Query: 61 TERKGE 66
          T RKGE
Sbjct: 75 TGRKGE 80

[Close]
BLAST of CSPI07G12530 vs. NCBI nr
Match: gi|700189228|gb|KGN44461.1| (hypothetical protein Csa_7G298770 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 8.1e-51
Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 1 

Query: 1   MEKKPNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 60
           MEKK NSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST
Sbjct: 1   MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 60

Query: 61  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA 105
           ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA
Sbjct: 61  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEEVEGA 104

[Close]
BLAST of CSPI07G12530 vs. NCBI nr
Match: gi|700198602|gb|KGN53760.1| (hypothetical protein Csa_4G123330 [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-12
Identity = 46/66 (69.70%), Postives = 49/66 (74.24%), Query Frame = 1 

Query: 1  MEKKPNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKM-NNPRRHIRKNIRLVNSRS 60
          ME K NSGLK DD LD KK FVQC GG ++SIGVGN+TRKM N PRR  RK   LVNS S
Sbjct: 15 MEIKTNSGLKNDDALDMKKLFVQCNGGGSISIGVGNQTRKMKNKPRRKRRKKNPLVNSWS 74

Query: 61 TERKGE 66
          T RKGE
Sbjct: 75 TGRKGE 80

The following BLAST results are available for this feature:
BLAST of CSPI07G12530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G12530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9H3_CUCSA5.6e-5199.04Uncharacterized protein OS=Cucumis sativus GN=Csa_7G298770 PE=4 SV=1[more]
A0A0A0KVV7_CUCSA1.8e-1269.70Uncharacterized protein OS=Cucumis sativus GN=Csa_4G123330 PE=4 SV=1[more]
BLAST of CSPI07G12530 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI07G12530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189228|gb|KGN44461.1|8.1e-5199.04hypothetical protein Csa_7G298770 [Cucumis sativus][more]
gi|700198602|gb|KGN53760.1|2.5e-1269.70hypothetical protein Csa_4G123330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G12530.1CSPI07G12530.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G12530Csa7G298770Cucumber (Chinese Long) v2cpicuB354
CSPI07G12530CsaV3_7G024540Cucumber (Chinese Long) v3cpicucB414
CSPI07G12530CsGy7G011670Cucumber (Gy14) v2cgybcpiB331
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G12530Melon (DHL92) v3.6.1cpimedB514
CSPI07G12530Silver-seed gourdcarcpiB0307
CSPI07G12530Silver-seed gourdcarcpiB0684
CSPI07G12530Watermelon (97103) v2cpiwmbB597
CSPI07G12530Wax gourdcpiwgoB718
CSPI07G12530Cucumber (Gy14) v1cgycpiB079
CSPI07G12530Cucurbita maxima (Rimu)cmacpiB045
CSPI07G12530Cucurbita maxima (Rimu)cmacpiB493
CSPI07G12530Cucurbita moschata (Rifu)cmocpiB035
CSPI07G12530Cucurbita moschata (Rifu)cmocpiB484
CSPI07G12530Melon (DHL92) v3.5.1cpimeB528
CSPI07G12530Watermelon (Charleston Gray)cpiwcgB554
CSPI07G12530Watermelon (97103) v1cpiwmB586
CSPI07G12530Cucurbita pepo (Zucchini)cpecpiB593
CSPI07G12530Cucurbita pepo (Zucchini)cpecpiB801
CSPI07G12530Bottle gourd (USVL1VR-Ls)cpilsiB517