CsGy7G011670 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G011670
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uncharacterized protein
Location	Chr7 : 14727970 .. 14728789 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGACTGTCGAGTATGAAATGGAAAAAAAAACCAACAGTGGATTGAAGATTGATGATGTCTTGGACACGAAGAAATCATTTGTACAGTGCATTGGAGGCAGCAATGTTTCGATCGGAGTTGGAAACCGTACAAGAAAGATGAACAATCCGAGGAGACATATAAGGAAGAATATCAGACTGGTGAACTCGCGGTCAACAGAGCGAAAAGGAGAGAAGGCTCGTTACGGAGAAGACCATTTGTGGGAAGGTGCAGAGCAAGGGTCGTGGCAGTGGCTCAATCAAAGGGGTAAATTGAATAGAGAAGATGAAAAAGAAGAAGTTGAAGGAGCTTAAGTTCATGGATCGATGAATGAAGAAATGTTGGTGGCTTAAAGCTAAGAAGAACGGTTGGCCTCAATGGAAGAAGGAAATATCAAGTCGCAGCGGATGGAAGATGGAAAGGCGGAGAAAAGAAAGTACACCGGCAGCCAGATGGTCTAAGAATCGAGGTGGAAATGAACAAAAGATGGTCACCGGCGGCCCAAGGAAGATGTATGCCTTGATAATTGCCAAAGGACAGTGGCTTGCAATGAAAAAAGAAGAGATAGATGAGTCATGAGTTTGAATGGCAAAGAGATTGGCAGGCGAAATCTGCGGTGACCACGCTGTAGAAGAGAATCAAAAGTCAATGAGAATGGAAGTGCTGGTTATGGCTGTTGAGATCGAGTTACGACGGTTGGAGGCATTGAAAATGGCAGAAGACGTGGATCTTGGGGTGATTTGTGTGATAGATGGGGACGATCAACTTGTCAAAATCTGGGGGCAAGGGGAGAGAAAATGA

mRNA sequence

GAGACTGTCGAGTATGAAATGGAAAAAAAAACCAACAGTGGATTGAAGATTGATGATGTCTTGGACACGAAGAAATCATTTGTACAGTGCATTGGAGGCAGCAATGTTTCGATCGGAGTTGGAAACCGTACAAGAAAGATGAACAATCCGAGGAGACATATAAGGAAGAATATCAGACTGGTGAACTCGCGGTCAACAGAGCGAAAAGGAGAGAAGGCTCGTTACGGAGAAGACCATTTGTGGGAAGGTGCAGAGCAAGGGTCGTGGCAGTGGCTCAATCAAAGGGGCGAAATCTGCGGTGACCACGCTGTAGAAGAGAATCAAAAGTCAATGAGAATGGAAGTGCTGGTTATGGCTGTTGAGATCGAGTTACGACGGTTGGAGGCATTGAAAATGGCAGAAGACGTGGATCTTGGGGTGATTTGTGTGATAGATGGGGACGATCAACTTGTCAAAATCTGGGGGCAAGGGGAGAGAAAATGA

Coding sequence (CDS)

GAGACTGTCGAGTATGAAATGGAAAAAAAAACCAACAGTGGATTGAAGATTGATGATGTCTTGGACACGAAGAAATCATTTGTACAGTGCATTGGAGGCAGCAATGTTTCGATCGGAGTTGGAAACCGTACAAGAAAGATGAACAATCCGAGGAGACATATAAGGAAGAATATCAGACTGGTGAACTCGCGGTCAACAGAGCGAAAAGGAGAGAAGGCTCGTTACGGAGAAGACCATTTGTGGGAAGGTGCAGAGCAAGGGTCGTGGCAGTGGCTCAATCAAAGGGGCGAAATCTGCGGTGACCACGCTGTAGAAGAGAATCAAAAGTCAATGAGAATGGAAGTGCTGGTTATGGCTGTTGAGATCGAGTTACGACGGTTGGAGGCATTGAAAATGGCAGAAGACGTGGATCTTGGGGTGATTTGTGTGATAGATGGGGACGATCAACTTGTCAAAATCTGGGGGCAAGGGGAGAGAAAATGA

Protein sequence

ETVEYEMEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRSTERKGEKARYGEDHLWEGAEQGSWQWLNQRGEICGDHAVEENQKSMRMEVLVMAVEIELRRLEALKMAEDVDLGVICVIDGDDQLVKIWGQGERK

Homology

[Close]

BLAST of CsGy7G011670 vs. NCBI nr
Match: KGN44461.1 (hypothetical protein Csa_7G298770 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 9.7e-44
Identity = 92/100 (92.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 7   MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 66
           MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST
Sbjct: 1   MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 60

Query: 67  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGEICGDHAVEE 107
           ERKGEKARYGEDHLWEGAEQGSWQWLNQRG++  +   EE
Sbjct: 61  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEE 100

[Close]

BLAST of CsGy7G011670 vs. NCBI nr
Match: KGN44463.1 (hypothetical protein Csa_7G298790 [Cucumis sativus])

HSP 1 Score: 85.9 bits (211), Expect = 1.4e-13
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0


Query: 96  GEICGDHAVEENQKSMRMEVLVMAVEIELRRLEALKMAEDVDLG 140
           GEICGDHAVEENQKSMRMEVLVMAVEIELRRLEALKMAEDVDLG
Sbjct: 7   GEICGDHAVEENQKSMRMEVLVMAVEIELRRLEALKMAEDVDLG 50

[Close]

BLAST of CsGy7G011670 vs. NCBI nr
Match: KGN53760.1 (hypothetical protein Csa_4G123330 [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 7.5e-12
Identity = 47/72 (65.28%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 1  ETVEYEMEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNN-PRRHIRKNIR 60
          E VEY+ME KTNSGLK DD LD KK FVQC GG ++SIGVGN+TRKM N       K   
Sbjct: 9  EIVEYKMEIKTNSGLKNDDALDMKKLFVQCNGGGSISIGVGNQTRKMKNXXXXXXXKKNP 68

Query: 61 LVNSRSTERKGE 72
          LVNS ST RKGE
Sbjct: 69 LVNSWSTGRKGE 80

[Close]

BLAST of CsGy7G011670 vs. TrEMBL
Match: tr|A0A0A0K9H3|A0A0A0K9H3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298770 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 6.4e-44
Identity = 92/100 (92.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 7   MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 66
           MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST
Sbjct: 1   MEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNNPRRHIRKNIRLVNSRST 60

Query: 67  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGEICGDHAVEE 107
           ERKGEKARYGEDHLWEGAEQGSWQWLNQRG++  +   EE
Sbjct: 61  ERKGEKARYGEDHLWEGAEQGSWQWLNQRGKLNREDEKEE 100

[Close]

BLAST of CsGy7G011670 vs. TrEMBL
Match: tr|A0A0A0K4S3|A0A0A0K4S3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298790 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 9.1e-14
Identity = 44/44 (100.00%), Postives = 44/44 (100.00%), Query Frame = 0


Query: 96  GEICGDHAVEENQKSMRMEVLVMAVEIELRRLEALKMAEDVDLG 140
           GEICGDHAVEENQKSMRMEVLVMAVEIELRRLEALKMAEDVDLG
Sbjct: 7   GEICGDHAVEENQKSMRMEVLVMAVEIELRRLEALKMAEDVDLG 50

[Close]

BLAST of CsGy7G011670 vs. TrEMBL
Match: tr|A0A0A0KVV7|A0A0A0KVV7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G123330 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.0e-12
Identity = 47/72 (65.28%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 1  ETVEYEMEKKTNSGLKIDDVLDTKKSFVQCIGGSNVSIGVGNRTRKMNN-PRRHIRKNIR 60
          E VEY+ME KTNSGLK DD LD KK FVQC GG ++SIGVGN+TRKM N       K   
Sbjct: 9  EIVEYKMEIKTNSGLKNDDALDMKKLFVQCNGGGSISIGVGNQTRKMKNXXXXXXXKKNP 68

Query: 61 LVNSRSTERKGE 72
          LVNS ST RKGE
Sbjct: 69 LVNSWSTGRKGE 80

The following BLAST results are available for this feature:

BLAST of CsGy7G011670 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44461.1	9.7e-44	92.00	hypothetical protein Csa_7G298770 [Cucumis sativus]	[more]
KGN44463.1	1.4e-13	100.00	hypothetical protein Csa_7G298790 [Cucumis sativus]	[more]
KGN53760.1	7.5e-12	65.28	hypothetical protein Csa_4G123330 [Cucumis sativus]	[more]

BLAST of CsGy7G011670 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy7G011670 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy7G011670 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K9H3\|A0A0A0K9H3_CUCSA	6.4e-44	92.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298770 PE=4 SV=1	[more]
tr\|A0A0A0K4S3\|A0A0A0K4S3_CUCSA	9.1e-14	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G298790 PE=4 SV=1	[more]
tr\|A0A0A0KVV7\|A0A0A0KVV7_CUCSA	5.0e-12	65.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G123330 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G011670.1	CsGy7G011670.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G011670	Csa7G298770	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G011670	CSPI07G12530	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G011670	CsaV3_7G024540	Cucumber (Chinese Long) v3	cgybcucB347

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G011670	Cucurbita maxima (Rimu)	cgybcmaB887
CsGy7G011670	Cucurbita maxima (Rimu)	cgybcmaB917
CsGy7G011670	Cucurbita maxima (Rimu)	cgybcmaB929
CsGy7G011670	Cucurbita maxima (Rimu)	cgybcmaB966
CsGy7G011670	Cucurbita moschata (Rifu)	cgybcmoB869
CsGy7G011670	Cucurbita moschata (Rifu)	cgybcmoB900
CsGy7G011670	Cucurbita moschata (Rifu)	cgybcmoB914
CsGy7G011670	Cucurbita moschata (Rifu)	cgybcmoB950
CsGy7G011670	Cucurbita pepo (Zucchini)	cgybcpeB943
CsGy7G011670	Cucurbita pepo (Zucchini)	cgybcpeB952
CsGy7G011670	Cucurbita pepo (Zucchini)	cgybcpeB982
CsGy7G011670	Bottle gourd (USVL1VR-Ls)	cgyblsiB472
CsGy7G011670	Melon (DHL92) v3.5.1	cgybmeB460
CsGy7G011670	Melon (DHL92) v3.6.1	cgybmedB458
CsGy7G011670	Watermelon (Charleston Gray)	cgybwcgB485
CsGy7G011670	Watermelon (97103) v1	cgybwmB529
CsGy7G011670	Silver-seed gourd	carcgybB0069
CsGy7G011670	Silver-seed gourd	carcgybB0291
CsGy7G011670	Silver-seed gourd	carcgybB0827
CsGy7G011670	Watermelon (97103) v2	cgybwmbB542
CsGy7G011670	Wax gourd	cgybwgoB677