Csa7G025210 (gene) Cucumber (Chinese Long) v2

NameCsa7G025210
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionRING finger protein; contains IPR013083 (Zinc finger, RING/FYVE/PHD-type)
LocationChr7 : 1409463 .. 1410155 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTTGCTATTTCTAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCCCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGAGGACGACGAGGAGTACTCATGGTGA

mRNA sequence

ATGTCTTTTGCTATTTCTAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCCCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGAGGACGACGAGGAGTACTCATGGTGA

Coding sequence (CDS)

ATGTCTTTTGCTATTTCTAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCCCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGAGGACGACGAGGAGTACTCATGGTGA

Protein sequence

MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW*
BLAST of Csa7G025210 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12
Identity = 32/84 (38.10%), Postives = 46/84 (54.76%), Query Frame = 1

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +      ++  +    E+  C++C+DE   +  +V ++PC HV+H+ C+  WL
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 248

Query: 206 ENHNSCPLCRKPLHHDDEDDEEYS 230
           E HNSCP+CR  L  DD D E  S
Sbjct: 249 ELHNSCPVCRFELPTDDPDYENRS 271

BLAST of Csa7G025210 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-11
Identity = 31/81 (38.27%), Postives = 41/81 (50.62%), Query Frame = 1

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +       +       E   C++C+D+   E  E  ++PC H+YH+ C+  WL
Sbjct: 197 PPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWL 256

Query: 206 ENHNSCPLCRKPLHHDDEDDE 227
           E HNSCP+CR  L  DD D E
Sbjct: 257 ELHNSCPVCRHELPTDDPDYE 276

BLAST of Csa7G025210 vs. Swiss-Prot
Match: YGI4_SCHPO (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.04c PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.1e-10
Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = 1

Query: 135 GAEETVVLDEAPPAVKRGVGVARG--ERLRSEEKMEELGDCSICLDELS-CEKREVMRIP 194
           G E     +   P VKR V  A    E L +++ M+    C IC D+++  ++++  ++P
Sbjct: 69  GGENDPFANPFQPPVKRAVKEAWDSFEPLSNDQLMDLT--CPICYDDMNENDEKQATKMP 128

Query: 195 CGHVYHESCIFKWLENHNSCPLCRKPLHHD 222
           CGH++ ++C+ KWLENH +CPLCRK + H+
Sbjct: 129 CGHIFGKNCLQKWLENHCTCPLCRKEVPHE 156

BLAST of Csa7G025210 vs. Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.8e-10
Identity = 37/98 (37.76%), Postives = 46/98 (46.94%), Query Frame = 1

Query: 130 GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMR 189
           GGGG G         APPA K  +       + S E  E +  C++C D +   +    +
Sbjct: 221 GGGGGGRRG------APPAAKSAIEALETFEVSSSEG-EMVMVCAVCKDGMVMGETG-KK 280

Query: 190 IPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEE 228
           +PCGH YH  CI  WL   NSCP+CR  L  DD + EE
Sbjct: 281 LPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEE 310

BLAST of Csa7G025210 vs. Swiss-Prot
Match: RN115_HUMAN (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 1

Query: 163 SEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDD 222
           ++E+++   +C +C ++ + E+ EV ++PC H +H SCI  WLE H++CP+CRK L+ +D
Sbjct: 218 TQEQVDMGLECPVCKEDYTVEE-EVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGED 277

Query: 223 EDDEEYS 230
              +  S
Sbjct: 278 STRQSQS 283

BLAST of Csa7G025210 vs. TrEMBL
Match: A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 3.2e-131
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 230

BLAST of Csa7G025210 vs. TrEMBL
Match: A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 2.1e-130
Identity = 228/230 (99.13%), Postives = 230/230 (100.00%), Query Frame = 1

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDD+D+EEYSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW 230

BLAST of Csa7G025210 vs. TrEMBL
Match: A0A0A0KYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.9e-49
Identity = 116/225 (51.56%), Postives = 152/225 (67.56%), Query Frame = 1

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSF IS+PI Y L A+G G NGVL+V +S++++ ISVS  + R   +L++T   P++NAL
Sbjct: 1   MSFEISSPIPYLLNANGFG-NGVLEVQLSYLERAISVSSFSQR---ILYETQPTPFNNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAEV 120
           FYLS+ QLQ PLF+I Q L SLNIR    + +AR+IAS +  M + N+   +NF+++A V
Sbjct: 61  FYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASFVAHMCNGNTGWNSNFYVIARV 120

Query: 121 DFIRLIWLPSMGGGGAGAEETVVLDEAPPAVK-RGVGVARGERLRSEEKMEELGDCSICL 180
           D +R+I +                +E P A   RGV V R  +L+SEE   E GDCS+CL
Sbjct: 121 DLVRVIRI----------------EEQPRAEGWRGVAVERLSKLKSEE---EKGDCSVCL 180

Query: 181 DELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRK--PLHH 221
           DEL CEKREV+RIPCGHVYHESCIFKWL + NSCPLCR   PLH+
Sbjct: 181 DELDCEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

BLAST of Csa7G025210 vs. TrEMBL
Match: A0A0A0LW68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573640 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25
Identity = 83/225 (36.89%), Postives = 118/225 (52.44%), Query Frame = 1

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRI--PYHN 60
           M+F   + I++R+   G   +   QV    IQ+ IS S +   P +++HQT  I   Y N
Sbjct: 1   MAFPTFHQIEFRVQHVGPSNHRFHQV--LEIQRRISHSLMFNFPPQIIHQTLPILLDYDN 60

Query: 61  ALFYL------SLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNF 120
             F L      S  +  S  FY+ Q+ SSLNI   AS+ MAR I     Q+ + NS  +F
Sbjct: 61  NFFPLHFNFFHSYGEPSSFTFYVAQLFSSLNINSIASEAMARNIFLIANQVANENSNASF 120

Query: 121 HILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180
           HI   +DFI   W+  +    + +   +  +E     ++ +G              +LGD
Sbjct: 121 HIAVIIDFINFTWMCPL----SFSTRQLTGNEVSMVEQKKIG-------------NDLGD 180

Query: 181 CSICLDELSCEKREV-MRIPCGHVYHESCIFKWLENHNSCPLCRK 217
           CSICLDELS   REV ++I CGHVYHE CI +WL+N +SCPLCR+
Sbjct: 181 CSICLDELSPSNREVVLKISCGHVYHELCILRWLDNSDSCPLCRR 206

BLAST of Csa7G025210 vs. TrEMBL
Match: A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21
Identity = 83/232 (35.78%), Postives = 118/232 (50.86%), Query Frame = 1

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGR-PHEVLHQTPRIPYHNA 60
           MSF+ ++ +Q   ++     +  L V + F  ++IS S      P  +L QTP      A
Sbjct: 1   MSFSATSCVQCS-FSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEA 60

Query: 61  LFYLSLRQLQSPL------FYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFH 120
           LF  SL  LQ PL      + + + L S N+R +  + ++  I S   Q  D N+E  F 
Sbjct: 61  LF--SLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQF-DINNEC-FK 120

Query: 121 ILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSE-------EK 180
           I   VD+I+  W  +          TV  +  PP   RG   +  ER++ +       E+
Sbjct: 121 IETNVDYIKEYWTEA--APELYPISTVGEEGLPP---RGASESAIERVKKQKFDGFRGEE 180

Query: 181 MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 219
            EE+GDCS+C +E+  +  EV RIPCGHVYH+SCI KWLE  NSCPLCR  L
Sbjct: 181 EEEIGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAAL 222

BLAST of Csa7G025210 vs. TAIR10
Match: AT5G37200.1 (AT5G37200.1 RING/U-box superfamily protein)

HSP 1 Score: 76.3 bits (186), Expect = 2.8e-14
Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 1

Query: 137 EETVVLDEAPPAVKRGVG------VARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 196
           E  V+    P  + RG        +   +R+ S +  EE   CSIC+++ S    +++R+
Sbjct: 117 ERRVIFPHGPSLLSRGASGEVFHRLVEEQRVESADLEEEDETCSICIEKFSESHEDIIRV 176

Query: 197 P-CGHVYHESCIFKWLENHNSCPLCRK-PLHHDDEDDEE 228
           P C H++H+ C+F+WL   NSCPLCRK P   +DED++E
Sbjct: 177 PDCLHLFHQGCLFEWLGLQNSCPLCRKVPYEEEDEDEDE 215

BLAST of Csa7G025210 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 74.7 bits (182), Expect = 8.3e-14
Identity = 32/84 (38.10%), Postives = 46/84 (54.76%), Query Frame = 1

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +      ++  +    E+  C++C+DE   +  +V ++PC HV+H+ C+  WL
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 248

Query: 206 ENHNSCPLCRKPLHHDDEDDEEYS 230
           E HNSCP+CR  L  DD D E  S
Sbjct: 249 ELHNSCPVCRFELPTDDPDYENRS 271

BLAST of Csa7G025210 vs. TAIR10
Match: AT5G64920.1 (AT5G64920.1 COP1-interacting protein 8)

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-11
Identity = 37/98 (37.76%), Postives = 46/98 (46.94%), Query Frame = 1

Query: 130 GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMR 189
           GGGG G         APPA K  +       + S E  E +  C++C D +   +    +
Sbjct: 221 GGGGGGRRG------APPAAKSAIEALETFEVSSSEG-EMVMVCAVCKDGMVMGETG-KK 280

Query: 190 IPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEE 228
           +PCGH YH  CI  WL   NSCP+CR  L  DD + EE
Sbjct: 281 LPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEE 310

BLAST of Csa7G025210 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.6e-11
Identity = 28/73 (38.36%), Postives = 36/73 (49.32%), Query Frame = 1

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +      ++  +        C +C DE    K E  ++PC H+YH  CI  WL
Sbjct: 159 PPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFEL-KSEAKQMPCHHIYHSDCIVPWL 218

Query: 206 ENHNSCPLCRKPL 219
             HNSCP+CRK L
Sbjct: 219 VQHNSCPVCRKEL 230

BLAST of Csa7G025210 vs. TAIR10
Match: AT5G56340.1 (AT5G56340.1 RING/U-box superfamily protein)

HSP 1 Score: 64.7 bits (156), Expect = 8.6e-11
Identity = 35/82 (42.68%), Postives = 44/82 (53.66%), Query Frame = 1

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  V     E L + + ME L  CS+CLD+   +  E   +PC H +H  CI  WL
Sbjct: 238 PPARKEAV-----EALPTVKIMEPL-QCSVCLDDFE-KGTEAKEMPCKHKFHVRCIVPWL 297

Query: 206 ENHNSCPLCRKPLHHDDEDDEE 228
           E H+SCP+CR  L    +DD+E
Sbjct: 298 ELHSSCPVCRFELPSSADDDDE 312

BLAST of Csa7G025210 vs. NCBI nr
Match: gi|449454422|ref|XP_004144954.1| (PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus])

HSP 1 Score: 475.7 bits (1223), Expect = 4.6e-131
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 230

BLAST of Csa7G025210 vs. NCBI nr
Match: gi|778730084|ref|XP_011659694.1| (PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus])

HSP 1 Score: 473.0 bits (1216), Expect = 3.0e-130
Identity = 228/230 (99.13%), Postives = 230/230 (100.00%), Query Frame = 1

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDD+D+EEYSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW 230

BLAST of Csa7G025210 vs. NCBI nr
Match: gi|778697402|ref|XP_011654314.1| (PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 116/225 (51.56%), Postives = 152/225 (67.56%), Query Frame = 1

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSF IS+PI Y L A+G G NGVL+V +S++++ ISVS  + R   +L++T   P++NAL
Sbjct: 1   MSFEISSPIPYLLNANGFG-NGVLEVQLSYLERAISVSSFSQR---ILYETQPTPFNNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAEV 120
           FYLS+ QLQ PLF+I Q L SLNIR    + +AR+IAS +  M + N+   +NF+++A V
Sbjct: 61  FYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASFVAHMCNGNTGWNSNFYVIARV 120

Query: 121 DFIRLIWLPSMGGGGAGAEETVVLDEAPPAVK-RGVGVARGERLRSEEKMEELGDCSICL 180
           D +R+I +                +E P A   RGV V R  +L+SEE   E GDCS+CL
Sbjct: 121 DLVRVIRI----------------EEQPRAEGWRGVAVERLSKLKSEE---EKGDCSVCL 180

Query: 181 DELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRK--PLHH 221
           DEL CEKREV+RIPCGHVYHESCIFKWL + NSCPLCR   PLH+
Sbjct: 181 DELDCEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

BLAST of Csa7G025210 vs. NCBI nr
Match: gi|659108614|ref|XP_008454295.1| (PREDICTED: uncharacterized protein LOC103494735 isoform X1 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26
Identity = 79/161 (49.07%), Postives = 112/161 (69.57%), Query Frame = 1

Query: 1   MSFAISNPIQYRLYASGTG-GNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNA 60
           MSFAIS+PIQY L  +GTG GNGVL++ +S+++++IS+S ++ R   +L++T  IP++NA
Sbjct: 1   MSFAISSPIQYLL--NGTGFGNGVLEIQLSYVERVISISSVSQR---ILYETQPIPFNNA 60

Query: 61  LFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAE 120
            FYLS+  LQ PLFYI Q L SLNIR    +N+AR+IAS++  M + N+   +NF+++A 
Sbjct: 61  HFYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIAR 120

Query: 121 VDFIRLIWL--PSM---GGGGAGAEETVVLDEAPPAVKRGV 154
           VD +R I +   SM   GGG     ETVV DE P A +RGV
Sbjct: 121 VDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGV 152

BLAST of Csa7G025210 vs. NCBI nr
Match: gi|700211049|gb|KGN66145.1| (hypothetical protein Csa_1G573640 [Cucumis sativus])

HSP 1 Score: 125.2 bits (313), Expect = 1.5e-25
Identity = 83/225 (36.89%), Postives = 118/225 (52.44%), Query Frame = 1

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRI--PYHN 60
           M+F   + I++R+   G   +   QV    IQ+ IS S +   P +++HQT  I   Y N
Sbjct: 1   MAFPTFHQIEFRVQHVGPSNHRFHQV--LEIQRRISHSLMFNFPPQIIHQTLPILLDYDN 60

Query: 61  ALFYL------SLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNF 120
             F L      S  +  S  FY+ Q+ SSLNI   AS+ MAR I     Q+ + NS  +F
Sbjct: 61  NFFPLHFNFFHSYGEPSSFTFYVAQLFSSLNINSIASEAMARNIFLIANQVANENSNASF 120

Query: 121 HILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180
           HI   +DFI   W+  +    + +   +  +E     ++ +G              +LGD
Sbjct: 121 HIAVIIDFINFTWMCPL----SFSTRQLTGNEVSMVEQKKIG-------------NDLGD 180

Query: 181 CSICLDELSCEKREV-MRIPCGHVYHESCIFKWLENHNSCPLCRK 217
           CSICLDELS   REV ++I CGHVYHE CI +WL+N +SCPLCR+
Sbjct: 181 CSICLDELSPSNREVVLKISCGHVYHELCILRWLDNSDSCPLCRR 206

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RNG1L_ARATH1.5e-1238.10E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RING1_GOSHI1.2e-1138.27E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
YGI4_SCHPO3.1e-1036.67Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai... [more]
CIP8_ARATH6.8e-1037.76E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1[more]
RN115_HUMAN2.6e-0937.31E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0K2W2_CUCSA3.2e-131100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1[more]
A0A0A0K696_CUCSA2.1e-13099.13Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1[more]
A0A0A0KYC0_CUCSA8.9e-4951.56Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1[more]
A0A0A0LW68_CUCSA1.1e-2536.89Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573640 PE=4 SV=1[more]
A0A0A0LHS2_CUCSA4.6e-2135.78Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G37200.12.8e-1436.36 RING/U-box superfamily protein[more]
AT3G19950.18.3e-1438.10 RING/U-box superfamily protein[more]
AT5G64920.13.8e-1137.76 COP1-interacting protein 8[more]
AT3G56580.26.6e-1138.36 RING/U-box superfamily protein[more]
AT5G56340.18.6e-1142.68 RING/U-box superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449454422|ref|XP_004144954.1|4.6e-131100.00PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus][more]
gi|778730084|ref|XP_011659694.1|3.0e-13099.13PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus][more]
gi|778697402|ref|XP_011654314.1|1.3e-4851.56PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus][more]
gi|659108614|ref|XP_008454295.1|6.8e-2649.07PREDICTED: uncharacterized protein LOC103494735 isoform X1 [Cucumis melo][more]
gi|700211049|gb|KGN66145.1|1.5e-2536.89hypothetical protein Csa_1G573640 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa7G025210.1Csa7G025210.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 172..215
score: 8.0
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 173..214
score: 4.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 173..215
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 163..223
score: 1.7
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 54..230
score: 2.7
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 172..221
score: 3.98