Csa7G025210 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTTTGCTATTTCTAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCCCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGAGGACGACGAGGAGTACTCATGGTGA ATGTCTTTTGCTATTTCTAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCCCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGAGGACGACGAGGAGTACTCATGGTGA ATGTCTTTTGCTATTTCTAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCCCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGAGGACGACGAGGAGTACTCATGGTGA MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW*
BLAST of Csa7G025210 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12 Identity = 32/84 (38.10%), Postives = 46/84 (54.76%), Query Frame = 1
BLAST of Csa7G025210 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.2e-11 Identity = 31/81 (38.27%), Postives = 41/81 (50.62%), Query Frame = 1
BLAST of Csa7G025210 vs. Swiss-Prot
Match: YGI4_SCHPO (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.04c PE=3 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 3.1e-10 Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = 1
BLAST of Csa7G025210 vs. Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.8e-10 Identity = 37/98 (37.76%), Postives = 46/98 (46.94%), Query Frame = 1
BLAST of Csa7G025210 vs. Swiss-Prot
Match: RN115_HUMAN (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09 Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 1
BLAST of Csa7G025210 vs. TrEMBL
Match: A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1) HSP 1 Score: 475.7 bits (1223), Expect = 3.2e-131 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Csa7G025210 vs. TrEMBL
Match: A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 2.1e-130 Identity = 228/230 (99.13%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Csa7G025210 vs. TrEMBL
Match: A0A0A0KYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 8.9e-49 Identity = 116/225 (51.56%), Postives = 152/225 (67.56%), Query Frame = 1
BLAST of Csa7G025210 vs. TrEMBL
Match: A0A0A0LW68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573640 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.1e-25 Identity = 83/225 (36.89%), Postives = 118/225 (52.44%), Query Frame = 1
BLAST of Csa7G025210 vs. TrEMBL
Match: A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21 Identity = 83/232 (35.78%), Postives = 118/232 (50.86%), Query Frame = 1
BLAST of Csa7G025210 vs. TAIR10
Match: AT5G37200.1 (AT5G37200.1 RING/U-box superfamily protein) HSP 1 Score: 76.3 bits (186), Expect = 2.8e-14 Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 1
BLAST of Csa7G025210 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein) HSP 1 Score: 74.7 bits (182), Expect = 8.3e-14 Identity = 32/84 (38.10%), Postives = 46/84 (54.76%), Query Frame = 1
BLAST of Csa7G025210 vs. TAIR10
Match: AT5G64920.1 (AT5G64920.1 COP1-interacting protein 8) HSP 1 Score: 65.9 bits (159), Expect = 3.8e-11 Identity = 37/98 (37.76%), Postives = 46/98 (46.94%), Query Frame = 1
BLAST of Csa7G025210 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein) HSP 1 Score: 65.1 bits (157), Expect = 6.6e-11 Identity = 28/73 (38.36%), Postives = 36/73 (49.32%), Query Frame = 1
BLAST of Csa7G025210 vs. TAIR10
Match: AT5G56340.1 (AT5G56340.1 RING/U-box superfamily protein) HSP 1 Score: 64.7 bits (156), Expect = 8.6e-11 Identity = 35/82 (42.68%), Postives = 44/82 (53.66%), Query Frame = 1
BLAST of Csa7G025210 vs. NCBI nr
Match: gi|449454422|ref|XP_004144954.1| (PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus]) HSP 1 Score: 475.7 bits (1223), Expect = 4.6e-131 Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Csa7G025210 vs. NCBI nr
Match: gi|778730084|ref|XP_011659694.1| (PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus]) HSP 1 Score: 473.0 bits (1216), Expect = 3.0e-130 Identity = 228/230 (99.13%), Postives = 230/230 (100.00%), Query Frame = 1
BLAST of Csa7G025210 vs. NCBI nr
Match: gi|778697402|ref|XP_011654314.1| (PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus]) HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48 Identity = 116/225 (51.56%), Postives = 152/225 (67.56%), Query Frame = 1
BLAST of Csa7G025210 vs. NCBI nr
Match: gi|659108614|ref|XP_008454295.1| (PREDICTED: uncharacterized protein LOC103494735 isoform X1 [Cucumis melo]) HSP 1 Score: 126.3 bits (316), Expect = 6.8e-26 Identity = 79/161 (49.07%), Postives = 112/161 (69.57%), Query Frame = 1
BLAST of Csa7G025210 vs. NCBI nr
Match: gi|700211049|gb|KGN66145.1| (hypothetical protein Csa_1G573640 [Cucumis sativus]) HSP 1 Score: 125.2 bits (313), Expect = 1.5e-25 Identity = 83/225 (36.89%), Postives = 118/225 (52.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |