CsGy7G001800 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G001800
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	E3 ubiquitin-protein ligase RNF181-like
Location	Chr7 : 1567121 .. 1567540 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTTTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGA

mRNA sequence

ATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTTTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGA

Coding sequence (CDS)

ATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTTTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGA

Protein sequence

MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVLLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW

Homology

[Close]

BLAST of CsGy7G001800 vs. NCBI nr
Match: XP_004144954.1 (PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical protein Csa_7G025210 [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 2.8e-71
Identity = 130/139 (93.53%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 1   MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVLLDEAPPAVKR 60
           MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETV+LDEAPPAVKR
Sbjct: 92  MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKR 151

Query: 61  GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC 120
           GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC
Sbjct: 152 GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC 211

Query: 121 PLCRKPLHXXXXXXXXYSW 140
           PLCRKPLH        YSW
Sbjct: 212 PLCRKPLHHDDEDDEEYSW 230

[Close]

BLAST of CsGy7G001800 vs. NCBI nr
Match: XP_011659694.1 (PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus] >KGN43356.1 hypothetical protein Csa_7G026750 [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 2.8e-71
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVLLDEAPPAVKR 60
           MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETV+LDEAPPAVKR
Sbjct: 92  MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKR 151

Query: 61  GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC 120
           GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC
Sbjct: 152 GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC 211

Query: 121 PLCRKPLHXXXXXXXXYSW 140
           PLCRKPLHXXXXXXXXYSW
Sbjct: 212 PLCRKPLHXXXXXXXXYSW 230

[Close]

BLAST of CsGy7G001800 vs. NCBI nr
Match: XP_016899530.1 (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 2.5e-56
Identity = 106/128 (82.81%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLP-SMGGGGAGAEETVLLDEAPPAVK 60
           MAR+IASHILQMPDRN + NFHI+AEVDFIR+IWL       GAGAEETV+ DEAPPA+K
Sbjct: 92  MARQIASHILQMPDRNGDRNFHIIAEVDFIRVIWLELEEQSMGAGAEETVVFDEAPPALK 151

Query: 61  RGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNS 120
           RGVG ARGERL+SEEK+E+LGDCSICLDELSCEKREV+RIPCGHVYHESCIFKWL+NHNS
Sbjct: 152 RGVGKARGERLKSEEKVEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNS 211

Query: 121 CPLCRKPL 128
           CPLCRKPL
Sbjct: 212 CPLCRKPL 219

[Close]

BLAST of CsGy7G001800 vs. NCBI nr
Match: XP_022928677.1 (E3 ubiquitin-protein ligase arkadia-like [Cucurbita moschata])

HSP 1 Score: 143.3 bits (360), Expect = 6.3e-31
Identity = 72/131 (54.96%), Postives = 90/131 (68.70%), Query Frame = 0


Query: 4   RIASHILQMPDRNSETNFHILAEVDFIRLIWL-------PSMGGGGAGAEETVLLDEAPP 63
           +IAS I Q+   N ET+FHI+ EVDFI+ IW+          G GG   EETV+LDE P 
Sbjct: 68  KIASQIAQLSAGNRETSFHIVVEVDFIQNIWMGQVAGMRQGQGNGGGLVEETVVLDELPA 127

Query: 64  AVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLEN 123
             ++  GV    R+  EE+ +ELGDC ICLDE+  +KREV+R PCGHVYHESCIF+WL  
Sbjct: 128 RRRQRRGVV--ARVEVEEE-KELGDCCICLDEMMNKKREVIRTPCGHVYHESCIFQWLNL 187

Query: 124 HNSCPLCRKPL 128
           HNSCPLC++PL
Sbjct: 188 HNSCPLCKRPL 195

[Close]

BLAST of CsGy7G001800 vs. NCBI nr
Match: XP_016901482.1 (PREDICTED: uncharacterized protein LOC107991269 [Cucumis melo])

HSP 1 Score: 140.6 bits (353), Expect = 4.1e-30
Identity = 75/131 (57.25%), Postives = 94/131 (71.76%), Query Frame = 0


Query: 1   MARRIASHILQMPDRNS--ETNFHILAEVDFIRLIWL--PSM---GGGGAGAEETVLLDE 60
           +AR+IAS++  M + N+   +NF+++A VD +R I +   SM   GGG     ETV+ DE
Sbjct: 85  IARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIRIEEESMWRDGGGVVVEAETVVFDE 144

Query: 61  APPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKW 120
            P A +RGV V  GERLR  +  EE GDCS+CLDEL C KREV+RIPCGHVYHESCIF+W
Sbjct: 145 VPRA-RRGVVV--GERLRKLKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEW 204

Query: 121 LENHNSCPLCR 125
           L N+NSCPLCR
Sbjct: 205 LNNNNSCPLCR 212

[Close]

BLAST of CsGy7G001800 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 4.7e-12
Identity = 26/70 (37.14%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 55  PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 114
           PPA K  +      ++  +    E+  C++C+DE   +  +V ++PC HV+H+ C+  WL
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 248

Query: 115 ENHNSCPLCR 125
           E HNSCP+CR
Sbjct: 249 ELHNSCPVCR 257

[Close]

BLAST of CsGy7G001800 vs. TAIR10
Match: AT5G37200.1 (RING/U-box superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 6.1e-12
Identity = 31/87 (35.63%), Postives = 49/87 (56.32%), Query Frame = 0


Query: 46  EETVLLDEAPPAVKRGVG------VARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 105
           E  V+    P  + RG        +   +R+ S +  EE   CSIC+++ S    +++R+
Sbjct: 117 ERRVIFPHGPSLLSRGASGEVFHRLVEEQRVESADLEEEDETCSICIEKFSESHEDIIRV 176

Query: 106 P-CGHVYHESCIFKWLENHNSCPLCRK 126
           P C H++H+ C+F+WL   NSCPLCRK
Sbjct: 177 PDCLHLFHQGCLFEWLGLQNSCPLCRK 203

[Close]

BLAST of CsGy7G001800 vs. TAIR10
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 3.9e-11
Identity = 28/73 (38.36%), Postives = 37/73 (50.68%), Query Frame = 0


Query: 55  PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 114
           PPA K  +      ++  +        C +C DE    K E  ++PC H+YH  CI  WL
Sbjct: 159 PPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFEL-KSEAKQMPCHHIYHSDCIVPWL 218

Query: 115 ENHNSCPLCRKPL 128
             HNSCP+CRK L
Sbjct: 219 VQHNSCPVCRKEL 230

[Close]

BLAST of CsGy7G001800 vs. TAIR10
Match: AT2G40830.2 (RING-H2 finger C1A)

HSP 1 Score: 61.2 bits (147), Expect = 5.7e-10
Identity = 25/73 (34.25%), Postives = 36/73 (49.32%), Query Frame = 0


Query: 55  PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 114
           PPA +  +      ++          +C +C DE      E  ++PC H+YH  CI  WL
Sbjct: 163 PPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGS-EAKQMPCNHIYHSDCIVPWL 222

Query: 115 ENHNSCPLCRKPL 128
             HNSCP+CR+ L
Sbjct: 223 VQHNSCPVCRQEL 234

[Close]

BLAST of CsGy7G001800 vs. TAIR10
Match: AT3G30460.1 (RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 7.4e-10
Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 0


Query: 72  SEEKMEE-LGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR 125
           +EE ME  L  C+IC +EL+  +R +  +PC H YH+ CI  WL N N+CPLCR
Sbjct: 86  AEEMMERGLVVCAICREELAANER-LSELPCRHYYHKECISNWLSNRNTCPLCR 138

[Close]

BLAST of CsGy7G001800 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 8.4e-11
Identity = 26/70 (37.14%), Postives = 42/70 (60.00%), Query Frame = 0


Query: 55  PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 114
           PPA K  +      ++  +    E+  C++C+DE   +  +V ++PC HV+H+ C+  WL
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 248

Query: 115 ENHNSCPLCR 125
           E HNSCP+CR
Sbjct: 249 ELHNSCPVCR 257

[Close]

BLAST of CsGy7G001800 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.2e-10
Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 0


Query: 55  PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 114
           PPA K  +       +       E   C++C+D+   E  E  ++PC H+YH+ C+  WL
Sbjct: 197 PPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWL 256

Query: 115 ENHNSCPLCRKPL 128
           E HNSCP+CR  L
Sbjct: 257 ELHNSCPVCRHEL 268

[Close]

BLAST of CsGy7G001800 vs. Swiss-Prot
Match: sp|Q94AK4|RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.1e-10
Identity = 28/73 (38.36%), Postives = 37/73 (50.68%), Query Frame = 0


Query: 55  PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 114
           PPA K  +      ++  +        C +C DE    K E  ++PC H+YH  CI  WL
Sbjct: 159 PPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFEL-KSEAKQMPCHHIYHSDCIVPWL 218

Query: 115 ENHNSCPLCRKPL 128
             HNSCP+CRK L
Sbjct: 219 VQHNSCPVCRKEL 230

[Close]

BLAST of CsGy7G001800 vs. Swiss-Prot
Match: sp|Q6AVN2|SIRP1_ORYSJ (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 45  AEETVLLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHV 104
           AE     +  PPA K  V     E L +  K+EE+  CS+CLD+L     +  ++PC H 
Sbjct: 168 AESDPSRNGTPPAKKEAV-----EALPT-VKIEEVVSCSVCLDDLEVGS-QAKQMPCEHK 227

Query: 105 YHESCIFKWLENHNSCPLCR 125
           +H SCI  WLE H+SCP+CR
Sbjct: 228 FHSSCILPWLELHSSCPVCR 240

[Close]

BLAST of CsGy7G001800 vs. Swiss-Prot
Match: sp|Q9Y7K6|YGI4_SCHPO (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.04c PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-09
Identity = 32/85 (37.65%), Postives = 52/85 (61.18%), Query Frame = 0


Query: 44  GAEETVLLDEAPPAVKRGVGVA--RGERLRSEEKMEELGDCSICLDELS-CEKREVMRIP 103
           G E     +   P VKR V  A    E L +++ M+    C IC D+++  ++++  ++P
Sbjct: 69  GGENDPFANPFQPPVKRAVKEAWDSFEPLSNDQLMDL--TCPICYDDMNENDEKQATKMP 128

Query: 104 CGHVYHESCIFKWLENHNSCPLCRK 126
           CGH++ ++C+ KWLENH +CPLCRK
Sbjct: 129 CGHIFGKNCLQKWLENHCTCPLCRK 151

[Close]

BLAST of CsGy7G001800 vs. TrEMBL
Match: tr|A0A0A0K696|A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71
Identity = 138/139 (99.28%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVLLDEAPPAVKR 60
           MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETV+LDEAPPAVKR
Sbjct: 92  MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKR 151

Query: 61  GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC 120
           GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC
Sbjct: 152 GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC 211

Query: 121 PLCRKPLHXXXXXXXXYSW 140
           PLCRKPLHXXXXXXXXYSW
Sbjct: 212 PLCRKPLHXXXXXXXXYSW 230

[Close]

BLAST of CsGy7G001800 vs. TrEMBL
Match: tr|A0A0A0K2W2|A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71
Identity = 130/139 (93.53%), Postives = 131/139 (94.24%), Query Frame = 0


Query: 1   MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVLLDEAPPAVKR 60
           MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETV+LDEAPPAVKR
Sbjct: 92  MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKR 151

Query: 61  GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC 120
           GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC
Sbjct: 152 GVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSC 211

Query: 121 PLCRKPLHXXXXXXXXYSW 140
           PLCRKPLH        YSW
Sbjct: 212 PLCRKPLHHDDEDDEEYSW 230

[Close]

BLAST of CsGy7G001800 vs. TrEMBL
Match: tr|A0A1S4DUZ4|A0A1S4DUZ4_CUCME (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.7e-56
Identity = 106/128 (82.81%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 1   MARRIASHILQMPDRNSETNFHILAEVDFIRLIWLP-SMGGGGAGAEETVLLDEAPPAVK 60
           MAR+IASHILQMPDRN + NFHI+AEVDFIR+IWL       GAGAEETV+ DEAPPA+K
Sbjct: 92  MARQIASHILQMPDRNGDRNFHIIAEVDFIRVIWLELEEQSMGAGAEETVVFDEAPPALK 151

Query: 61  RGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNS 120
           RGVG ARGERL+SEEK+E+LGDCSICLDELSCEKREV+RIPCGHVYHESCIFKWL+NHNS
Sbjct: 152 RGVGKARGERLKSEEKVEDLGDCSICLDELSCEKREVIRIPCGHVYHESCIFKWLKNHNS 211

Query: 121 CPLCRKPL 128
           CPLCRKPL
Sbjct: 212 CPLCRKPL 219

[Close]

BLAST of CsGy7G001800 vs. TrEMBL
Match: tr|A0A1S4DZR1|A0A1S4DZR1_CUCME (uncharacterized protein LOC107991269 OS=Cucumis melo OX=3656 GN=LOC107991269 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.7e-30
Identity = 75/131 (57.25%), Postives = 94/131 (71.76%), Query Frame = 0


Query: 1   MARRIASHILQMPDRNS--ETNFHILAEVDFIRLIWL--PSM---GGGGAGAEETVLLDE 60
           +AR+IAS++  M + N+   +NF+++A VD +R I +   SM   GGG     ETV+ DE
Sbjct: 85  IARQIASYVAHMCNGNTGRNSNFYVIARVDLVRAIRIEEESMWRDGGGVVVEAETVVFDE 144

Query: 61  APPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKW 120
            P A +RGV V  GERLR  +  EE GDCS+CLDEL C KREV+RIPCGHVYHESCIF+W
Sbjct: 145 VPRA-RRGVVV--GERLRKLKSEEEEGDCSVCLDELDCGKREVIRIPCGHVYHESCIFEW 204

Query: 121 LENHNSCPLCR 125
           L N+NSCPLCR
Sbjct: 205 LNNNNSCPLCR 212

[Close]

BLAST of CsGy7G001800 vs. TrEMBL
Match: tr|A0A0A0KYC0|A0A0A0KYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003650 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 69/133 (51.88%), Postives = 87/133 (65.41%), Query Frame = 0


Query: 1   MARRIASHILQMPDRNS--ETNFHILAEVDFIRLIWLPSMGGGGAGAEETVLLDEAPPAV 60
           +AR+IAS +  M + N+   +NF+++A VD +R+I                 ++E P A 
Sbjct: 85  IARQIASFVAHMCNGNTGWNSNFYVIARVDLVRVI----------------RIEEQPRAE 144

Query: 61  K-RGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENH 120
             RGV V R  +L+SE   EE GDCS+CLDEL CEKREV+RIPCGHVYHESCIFKWL + 
Sbjct: 145 GWRGVAVERLSKLKSE---EEKGDCSVCLDELDCEKREVIRIPCGHVYHESCIFKWLNSS 198

Query: 121 NSCPLCRK--PLH 129
           NSCPLCR   PLH
Sbjct: 205 NSCPLCRSSFPLH 198

The following BLAST results are available for this feature:

BLAST of CsGy7G001800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144954.1	2.8e-71	93.53	PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hy...	[more]
XP_011659694.1	2.8e-71	99.28	PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus] >KGN43356.1 hy...	[more]
XP_016899530.1	2.5e-56	82.81	PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo]	[more]
XP_022928677.1	6.3e-31	54.96	E3 ubiquitin-protein ligase arkadia-like [Cucurbita moschata]	[more]
XP_016901482.1	4.1e-30	57.25	PREDICTED: uncharacterized protein LOC107991269 [Cucumis melo]	[more]

BLAST of CsGy7G001800 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G19950.1	4.7e-12	37.14	RING/U-box superfamily protein	[more]
AT5G37200.1	6.1e-12	35.63	RING/U-box superfamily protein	[more]
AT3G56580.2	3.9e-11	38.36	RING/U-box superfamily protein	[more]
AT2G40830.2	5.7e-10	34.25	RING-H2 finger C1A	[more]
AT3G30460.1	7.4e-10	50.00	RING/U-box superfamily protein	[more]

BLAST of CsGy7G001800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LPN7\|RNG1L_ARATH	8.4e-11	37.14	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
sp\|P0CH30\|RING1_GOSHI	4.2e-10	36.99	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
sp\|Q94AK4\|RZF1_ARATH	7.1e-10	38.36	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]
sp\|Q6AVN2\|SIRP1_ORYSJ	1.2e-09	42.50	E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI...	[more]
sp\|Q9Y7K6\|YGI4_SCHPO	1.2e-09	37.65	Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai...	[more]

BLAST of CsGy7G001800 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K696\|A0A0A0K696_CUCSA	1.8e-71	99.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1	[more]
tr\|A0A0A0K2W2\|A0A0A0K2W2_CUCSA	1.8e-71	93.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1	[more]
tr\|A0A1S4DUZ4\|A0A1S4DUZ4_CUCME	1.7e-56	82.81	E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 ...	[more]
tr\|A0A1S4DZR1\|A0A1S4DZR1_CUCME	2.7e-30	57.25	uncharacterized protein LOC107991269 OS=Cucumis melo OX=3656 GN=LOC107991269 PE=...	[more]
tr\|A0A0A0KYC0\|A0A0A0KYC0_CUCSA	2.4e-26	51.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003650 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G001800.1	CsGy7G001800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 82..123 e-value: 4.4E-8 score: 42.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 81..124 e-value: 6.0E-14 score: 52.0
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 82..124 score: 13.478
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 67..138 e-value: 2.6E-20 score: 73.3
None	No IPR available	PANTHER	PTHR44683	FAMILY NOT NAMED	coord: 52..137
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 81..130

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G001800	Csa7G025210	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G001800	CSPI07G01840	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G001800	Cp4.1LG16g03320	Cucurbita pepo (Zucchini)	cgybcpeB919
CsGy7G001800	CsaV3_7G001950	Cucumber (Chinese Long) v3	cgybcucB348

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G001800	Cucumber (Gy14) v2	cgybcgybB136
CsGy7G001800	Cucumber (Gy14) v2	cgybcgybB154
CsGy7G001800	Cucurbita maxima (Rimu)	cgybcmaB899
CsGy7G001800	Cucurbita maxima (Rimu)	cgybcmaB944
CsGy7G001800	Cucurbita maxima (Rimu)	cgybcmaB957
CsGy7G001800	Cucurbita maxima (Rimu)	cgybcmaB959
CsGy7G001800	Cucurbita moschata (Rifu)	cgybcmoB877
CsGy7G001800	Cucurbita moschata (Rifu)	cgybcmoB927
CsGy7G001800	Cucurbita moschata (Rifu)	cgybcmoB938
CsGy7G001800	Cucurbita pepo (Zucchini)	cgybcpeB910
CsGy7G001800	Cucurbita pepo (Zucchini)	cgybcpeB964
CsGy7G001800	Cucumber (Chinese Long) v2	cgybcuB321
CsGy7G001800	Bottle gourd (USVL1VR-Ls)	cgyblsiB455
CsGy7G001800	Bottle gourd (USVL1VR-Ls)	cgyblsiB462
CsGy7G001800	Melon (DHL92) v3.5.1	cgybmeB454
CsGy7G001800	Melon (DHL92) v3.5.1	cgybmeB469
CsGy7G001800	Melon (DHL92) v3.6.1	cgybmedB451
CsGy7G001800	Melon (DHL92) v3.6.1	cgybmedB466
CsGy7G001800	Melon (DHL92) v3.6.1	cgybmedB472
CsGy7G001800	Watermelon (Charleston Gray)	cgybwcgB506
CsGy7G001800	Watermelon (97103) v1	cgybwmB566
CsGy7G001800	Wild cucumber (PI 183967)	cgybcpiB328
CsGy7G001800	Silver-seed gourd	carcgybB0217
CsGy7G001800	Silver-seed gourd	carcgybB0361
CsGy7G001800	Silver-seed gourd	carcgybB0846
CsGy7G001800	Silver-seed gourd	carcgybB1049
CsGy7G001800	Cucumber (Chinese Long) v3	cgybcucB344
CsGy7G001800	Watermelon (97103) v2	cgybwmbB502
CsGy7G001800	Wax gourd	cgybwgoB641