Cucsa.099760 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.099760
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRING finger protein 126
Locationscaffold00926 : 462422 .. 463084 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAACCTTTATCCAACAAATCATCTCTGTTTCTCCGCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTACTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTTTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGA

mRNA sequence

TACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAACCTTTATCCAACAAATCATCTCTGTTTCTCCGCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTACTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTTTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGA

Coding sequence (CDS)

TACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAACCTTTATCCAACAAATCATCTCTGTTTCTCCGCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTACTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTTTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGA

Protein sequence

YRLYASGTGGNGVLQVNITFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQSPLYYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVLLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW*
Homology
[Close]
BLAST of Cucsa.099760 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 32/84 (38.10%), Postives = 48/84 (57.14%), Query Frame = 1 

Query: 136 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 195
           PPA K  +      ++  +    E+  C++C+DE   +  +V ++PC HV+H+ C+  WL
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 248

Query: 196 ENHNSCPLCRKPLHHDDDDEEEYS 220
           E HNSCP+CR  L  DD D E  S
Sbjct: 249 ELHNSCPVCRFELPTDDPDYENRS 271

[Close]
BLAST of Cucsa.099760 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.1e-12
Identity = 31/81 (38.27%), Postives = 43/81 (53.09%), Query Frame = 1 

Query: 136 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 195
           PPA K  +       +       E   C++C+D+   E  E  ++PC H+YH+ C+  WL
Sbjct: 197 PPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWL 256

Query: 196 ENHNSCPLCRKPLHHDDDDEE 217
           E HNSCP+CR  L  DD D E
Sbjct: 257 ELHNSCPVCRHELPTDDPDYE 276

[Close]
BLAST of Cucsa.099760 vs. Swiss-Prot
Match: YGI4_SCHPO (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.04c PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.2e-10
Identity = 33/90 (36.67%), Postives = 55/90 (61.11%), Query Frame = 1 

Query: 125 GAEETVLLDEAPPAVKRGVGVARG--ERLRSEEKMEELGDCSICLDELS-CEKREVMRIP 184
           G E     +   P VKR V  A    E L +++ M+    C IC D+++  ++++  ++P
Sbjct: 69  GGENDPFANPFQPPVKRAVKEAWDSFEPLSNDQLMDLT--CPICYDDMNENDEKQATKMP 128

Query: 185 CGHVYHESCIFKWLENHNSCPLCRKPLHHD 212
           CGH++ ++C+ KWLENH +CPLCRK + H+
Sbjct: 129 CGHIFGKNCLQKWLENHCTCPLCRKEVPHE 156

[Close]
BLAST of Cucsa.099760 vs. Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.5e-10
Identity = 37/98 (37.76%), Postives = 48/98 (48.98%), Query Frame = 1 

Query: 120 GGGGAGAEETVLLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMR 179
           GGGG G         APPA K  +       + S E  E +  C++C D +   +    +
Sbjct: 221 GGGGGGRRG------APPAAKSAIEALETFEVSSSEG-EMVMVCAVCKDGMVMGETG-KK 280

Query: 180 IPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEE 218
           +PCGH YH  CI  WL   NSCP+CR  L  DD + EE
Sbjct: 281 LPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEE 310

[Close]
BLAST of Cucsa.099760 vs. Swiss-Prot
Match: RN181_RAT (E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 8.5e-10
Identity = 36/83 (43.37%), Postives = 46/83 (55.42%), Query Frame = 1 

Query: 136 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 195
           PPA K  V       +RS +   EL  C +CL E   E+  V+ +PC H++H +CI  WL
Sbjct: 64  PPAAKAVVESLPRTVIRSSKA--EL-KCPVCLLEFE-EEETVIEMPCHHLFHSNCILPWL 123

Query: 196 ENHNSCPLCRKPLHHDDDDEEEY 219
              NSCPLCR  L  DDD  EE+
Sbjct: 124 SKTNSCPLCRHELPTDDDSYEEH 142

[Close]
BLAST of Cucsa.099760 vs. TrEMBL
Match: A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 1.6e-124
Identity = 217/220 (98.64%), Postives = 220/220 (100.00%), Query Frame = 1 

Query: 1   YRLYASGTGGNGVLQVNITFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS 60
           YRLYASGTGGNGVLQVNI+FIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS
Sbjct: 11  YRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS 70

Query: 61  PLYYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG 120
           PL+YITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG
Sbjct: 71  PLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG 130

Query: 121 GGGAGAEETVLLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 180
           GGGAGAEETV+LDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI
Sbjct: 131 GGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 190

Query: 181 PCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW 221
           PCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW
Sbjct: 191 PCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW 230

[Close]
BLAST of Cucsa.099760 vs. TrEMBL
Match: A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 1.0e-123
Identity = 215/220 (97.73%), Postives = 220/220 (100.00%), Query Frame = 1 

Query: 1   YRLYASGTGGNGVLQVNITFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS 60
           YRLYASGTGGNGVLQVNI+FIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS
Sbjct: 11  YRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS 70

Query: 61  PLYYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG 120
           PL+YITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG
Sbjct: 71  PLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG 130

Query: 121 GGGAGAEETVLLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 180
           GGGAGAEETV+LDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI
Sbjct: 131 GGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 190

Query: 181 PCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW 221
           PCGHVYHESCIFKWLENHNSCPLCRKPLHHDD+D+EEYSW
Sbjct: 191 PCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 230

[Close]
BLAST of Cucsa.099760 vs. TrEMBL
Match: A0A0A0KYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.2e-44
Identity = 107/215 (49.77%), Postives = 144/215 (66.98%), Query Frame = 1 

Query: 1   YRLYASGTGGNGVLQVNITFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS 60
           Y L A+G G NGVL+V ++++++ ISVS  + R   +L++T   P++NALFYLS+ QLQ 
Sbjct: 11  YLLNANGFG-NGVLEVQLSYLERAISVSSFSQR---ILYETQPTPFNNALFYLSVHQLQH 70

Query: 61  PLYYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAEVDFIRLIWLPS 120
           PL++I Q L SLNIR    + +AR+IAS +  M + N+   +NF+++A VD +R+I    
Sbjct: 71  PLFHIRQFLYSLNIR---RETIARQIASFVAHMCNGNTGWNSNFYVIARVDLVRVI---- 130

Query: 121 MGGGGAGAEETVLLDEAPPAVK-RGVGVARGERLRSEEKMEELGDCSICLDELSCEKREV 180
                        ++E P A   RGV V R  +L+SEE   E GDCS+CLDEL CEKREV
Sbjct: 131 ------------RIEEQPRAEGWRGVAVERLSKLKSEE---EKGDCSVCLDELDCEKREV 190

Query: 181 MRIPCGHVYHESCIFKWLENHNSCPLCRK--PLHH 211
           +RIPCGHVYHESCIFKWL + NSCPLCR   PLH+
Sbjct: 191 IRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

[Close]
BLAST of Cucsa.099760 vs. TrEMBL
Match: A0A0A0LW68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573640 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-24
Identity = 75/195 (38.46%), Postives = 105/195 (53.85%), Query Frame = 1 

Query: 21  IQQIISVSPLTGRPHEVLHQTPRI--PYHNALFYL------SLRQLQSPLYYITQILSSL 80
           IQ+ IS S +   P +++HQT  I   Y N  F L      S  +  S  +Y+ Q+ SSL
Sbjct: 29  IQRRISHSLMFNFPPQIIHQTLPILLDYDNNFFPLHFNFFHSYGEPSSFTFYVAQLFSSL 88

Query: 81  NIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVLL 140
           NI   AS+ MAR I     Q+ + NS  +FHI   +DFI   W+  +    + +   +  
Sbjct: 89  NINSIASEAMARNIFLIANQVANENSNASFHIAVIIDFINFTWMCPL----SFSTRQLTG 148

Query: 141 DEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREV-MRIPCGHVYHESCI 200
           +E     ++ +G              +LGDCSICLDELS   REV ++I CGHVYHE CI
Sbjct: 149 NEVSMVEQKKIG-------------NDLGDCSICLDELSPSNREVVLKISCGHVYHELCI 206

Query: 201 FKWLENHNSCPLCRK 207
            +WL+N +SCPLCR+
Sbjct: 209 LRWLDNSDSCPLCRR 206

[Close]
BLAST of Cucsa.099760 vs. TrEMBL
Match: A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.7e-21
Identity = 80/209 (38.28%), Postives = 107/209 (51.20%), Query Frame = 1 

Query: 14  LQVNITFIQQIISVSPLTGR-PHEVLHQTPRIPYHNALFYLSLRQLQSPL------YYIT 73
           L V + F  ++IS S      P  +L QTP      ALF  SL  LQ PL      Y + 
Sbjct: 23  LIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEALF--SLSNLQYPLQQQELEYMVN 82

Query: 74  QILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGA 133
           + L S N+R +  + ++  I S   Q  D N+E  F I   VD+I+  W  +        
Sbjct: 83  EFLRSFNLRSSVCRIVSHNILSFAQQF-DINNEC-FKIETNVDYIKEYWTEA--APELYP 142

Query: 134 EETVLLDEAPPAVKRGVGVARGERLRSE-------EKMEELGDCSICLDELSCEKREVMR 193
             TV  +  PP   RG   +  ER++ +       E+ EE+GDCS+C +E+  +  EV R
Sbjct: 143 ISTVGEEGLPP---RGASESAIERVKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGGEVRR 202

Query: 194 IPCGHVYHESCIFKWLENHNSCPLCRKPL 209
           IPCGHVYH+SCI KWLE  NSCPLCR  L
Sbjct: 203 IPCGHVYHKSCILKWLEISNSCPLCRAAL 222

[Close]
BLAST of Cucsa.099760 vs. TAIR10
Match: AT5G37200.1 (AT5G37200.1 RING/U-box superfamily protein)

HSP 1 Score: 75.9 bits (185), Expect = 3.6e-14
Identity = 36/99 (36.36%), Postives = 57/99 (57.58%), Query Frame = 1 

Query: 127 EETVLLDEAPPAVKRGVG------VARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 186
           E  V+    P  + RG        +   +R+ S +  EE   CSIC+++ S    +++R+
Sbjct: 117 ERRVIFPHGPSLLSRGASGEVFHRLVEEQRVESADLEEEDETCSICIEKFSESHEDIIRV 176

Query: 187 P-CGHVYHESCIFKWLENHNSCPLCRK-PLHHDDDDEEE 218
           P C H++H+ C+F+WL   NSCPLCRK P   +D+DE+E
Sbjct: 177 PDCLHLFHQGCLFEWLGLQNSCPLCRKVPYEEEDEDEDE 215

[Close]
BLAST of Cucsa.099760 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 75.1 bits (183), Expect = 6.1e-14
Identity = 32/84 (38.10%), Postives = 48/84 (57.14%), Query Frame = 1 

Query: 136 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 195
           PPA K  +      ++  +    E+  C++C+DE   +  +V ++PC HV+H+ C+  WL
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 248

Query: 196 ENHNSCPLCRKPLHHDDDDEEEYS 220
           E HNSCP+CR  L  DD D E  S
Sbjct: 249 ELHNSCPVCRFELPTDDPDYENRS 271

[Close]
BLAST of Cucsa.099760 vs. TAIR10
Match: AT5G64920.1 (AT5G64920.1 COP1-interacting protein 8)

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-11
Identity = 37/98 (37.76%), Postives = 48/98 (48.98%), Query Frame = 1 

Query: 120 GGGGAGAEETVLLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMR 179
           GGGG G         APPA K  +       + S E  E +  C++C D +   +    +
Sbjct: 221 GGGGGGRRG------APPAAKSAIEALETFEVSSSEG-EMVMVCAVCKDGMVMGETG-KK 280

Query: 180 IPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEE 218
           +PCGH YH  CI  WL   NSCP+CR  L  DD + EE
Sbjct: 281 LPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEE 310

[Close]
BLAST of Cucsa.099760 vs. TAIR10
Match: AT3G13430.1 (AT3G13430.1 RING/U-box superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 4.8e-11
Identity = 33/80 (41.25%), Postives = 42/80 (52.50%), Query Frame = 1 

Query: 136 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 195
           PPA K  V     E L   +  + L  CS+CLD+      E   +PC H +H  C+  WL
Sbjct: 203 PPATKEAV-----EALAMVKIEDSLLQCSVCLDDFEIGM-EAKEMPCKHKFHSDCLLPWL 262

Query: 196 ENHNSCPLCRKPLHHDDDDE 216
           E H+SCP+CR  L   DDDE
Sbjct: 263 ELHSSCPVCRYLLPTGDDDE 276

[Close]
BLAST of Cucsa.099760 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.3e-11
Identity = 28/73 (38.36%), Postives = 37/73 (50.68%), Query Frame = 1 

Query: 136 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 195
           PPA K  +      ++  +        C +C DE    K E  ++PC H+YH  CI  WL
Sbjct: 159 PPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFEL-KSEAKQMPCHHIYHSDCIVPWL 218

Query: 196 ENHNSCPLCRKPL 209
             HNSCP+CRK L
Sbjct: 219 VQHNSCPVCRKEL 230

[Close]
BLAST of Cucsa.099760 vs. NCBI nr
Match: gi|778730084|ref|XP_011659694.1| (PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus])

HSP 1 Score: 453.4 bits (1165), Expect = 2.3e-124
Identity = 217/220 (98.64%), Postives = 220/220 (100.00%), Query Frame = 1 

Query: 1   YRLYASGTGGNGVLQVNITFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS 60
           YRLYASGTGGNGVLQVNI+FIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS
Sbjct: 11  YRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS 70

Query: 61  PLYYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG 120
           PL+YITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG
Sbjct: 71  PLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG 130

Query: 121 GGGAGAEETVLLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 180
           GGGAGAEETV+LDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI
Sbjct: 131 GGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 190

Query: 181 PCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW 221
           PCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW
Sbjct: 191 PCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW 230

[Close]
BLAST of Cucsa.099760 vs. NCBI nr
Match: gi|449454422|ref|XP_004144954.1| (PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus])

HSP 1 Score: 450.7 bits (1158), Expect = 1.5e-123
Identity = 215/220 (97.73%), Postives = 220/220 (100.00%), Query Frame = 1 

Query: 1   YRLYASGTGGNGVLQVNITFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS 60
           YRLYASGTGGNGVLQVNI+FIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS
Sbjct: 11  YRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS 70

Query: 61  PLYYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG 120
           PL+YITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG
Sbjct: 71  PLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMG 130

Query: 121 GGGAGAEETVLLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 180
           GGGAGAEETV+LDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI
Sbjct: 131 GGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 190

Query: 181 PCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW 221
           PCGHVYHESCIFKWLENHNSCPLCRKPLHHDD+D+EEYSW
Sbjct: 191 PCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 230

[Close]
BLAST of Cucsa.099760 vs. NCBI nr
Match: gi|778697402|ref|XP_011654314.1| (PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 3.1e-44
Identity = 107/215 (49.77%), Postives = 144/215 (66.98%), Query Frame = 1 

Query: 1   YRLYASGTGGNGVLQVNITFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQS 60
           Y L A+G G NGVL+V ++++++ ISVS  + R   +L++T   P++NALFYLS+ QLQ 
Sbjct: 11  YLLNANGFG-NGVLEVQLSYLERAISVSSFSQR---ILYETQPTPFNNALFYLSVHQLQH 70

Query: 61  PLYYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAEVDFIRLIWLPS 120
           PL++I Q L SLNIR    + +AR+IAS +  M + N+   +NF+++A VD +R+I    
Sbjct: 71  PLFHIRQFLYSLNIR---RETIARQIASFVAHMCNGNTGWNSNFYVIARVDLVRVI---- 130

Query: 121 MGGGGAGAEETVLLDEAPPAVK-RGVGVARGERLRSEEKMEELGDCSICLDELSCEKREV 180
                        ++E P A   RGV V R  +L+SEE   E GDCS+CLDEL CEKREV
Sbjct: 131 ------------RIEEQPRAEGWRGVAVERLSKLKSEE---EKGDCSVCLDELDCEKREV 190

Query: 181 MRIPCGHVYHESCIFKWLENHNSCPLCRK--PLHH 211
           +RIPCGHVYHESCIFKWL + NSCPLCR   PLH+
Sbjct: 191 IRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

[Close]
BLAST of Cucsa.099760 vs. NCBI nr
Match: gi|659100547|ref|XP_008451147.1| (PREDICTED: E3 ubiquitin-protein ligase ATL59-like [Cucumis melo])

HSP 1 Score: 125.6 bits (314), Expect = 1.1e-25
Identity = 75/195 (38.46%), Postives = 106/195 (54.36%), Query Frame = 1 

Query: 21  IQQIISVSPLTGRPHEVLHQTPRIPYHN--------ALFYLSLRQLQSPLYYITQILSSL 80
           IQ+  S S +   PH+ +HQT  I   N          F+ +  +  S   Y+TQ+LSSL
Sbjct: 30  IQRRFSHSLMFDFPHQTIHQTSSISIDNYDNYFPLPLNFFHNYYEPSSFPSYVTQLLSSL 89

Query: 81  NIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVLL 140
           +I    S+ +AR I      +   NS  +FHI+  VDFI+  W+ S+         ++L 
Sbjct: 90  DINSVNSEVIAREIVLIANHVAKENSNASFHIVVTVDFIQFTWMHSL---------SLLT 149

Query: 141 DEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREV-MRIPCGHVYHESCI 200
            ++     R VG    E+        +L DCSICL+E SC  R++ ++IPCGHVYHESCI
Sbjct: 150 QQSTRNEVRMVGWKEIEK--------DLDDCSICLEEFSCNNRKIGLKIPCGHVYHESCI 207

Query: 201 FKWLENHNSCPLCRK 207
            KWLEN +SCPLCR+
Sbjct: 210 LKWLENSHSCPLCRR 207

[Close]
BLAST of Cucsa.099760 vs. NCBI nr
Match: gi|700211049|gb|KGN66145.1| (hypothetical protein Csa_1G573640 [Cucumis sativus])

HSP 1 Score: 120.2 bits (300), Expect = 4.7e-24
Identity = 75/195 (38.46%), Postives = 105/195 (53.85%), Query Frame = 1 

Query: 21  IQQIISVSPLTGRPHEVLHQTPRI--PYHNALFYL------SLRQLQSPLYYITQILSSL 80
           IQ+ IS S +   P +++HQT  I   Y N  F L      S  +  S  +Y+ Q+ SSL
Sbjct: 29  IQRRISHSLMFNFPPQIIHQTLPILLDYDNNFFPLHFNFFHSYGEPSSFTFYVAQLFSSL 88

Query: 81  NIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVLL 140
           NI   AS+ MAR I     Q+ + NS  +FHI   +DFI   W+  +    + +   +  
Sbjct: 89  NINSIASEAMARNIFLIANQVANENSNASFHIAVIIDFINFTWMCPL----SFSTRQLTG 148

Query: 141 DEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREV-MRIPCGHVYHESCI 200
           +E     ++ +G              +LGDCSICLDELS   REV ++I CGHVYHE CI
Sbjct: 149 NEVSMVEQKKIG-------------NDLGDCSICLDELSPSNREVVLKISCGHVYHELCI 206

Query: 201 FKWLENHNSCPLCRK 207
            +WL+N +SCPLCR+
Sbjct: 209 LRWLDNSDSCPLCRR 206

The following BLAST results are available for this feature:
BLAST of Cucsa.099760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNG1L_ARATH1.1e-1238.10E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1... [more]
RING1_GOSHI9.1e-1238.27E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1[more]
YGI4_SCHPO2.2e-1036.67Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai... [more]
CIP8_ARATH6.5e-1037.76E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1[more]
RN181_RAT8.5e-1043.37E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181 PE=1 SV=1[more]
BLAST of Cucsa.099760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K696_CUCSA1.6e-12498.64Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1[more]
A0A0A0K2W2_CUCSA1.0e-12397.73Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1[more]
A0A0A0KYC0_CUCSA2.2e-4449.77Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1[more]
A0A0A0LW68_CUCSA3.2e-2438.46Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573640 PE=4 SV=1[more]
A0A0A0LHS2_CUCSA5.7e-2138.28Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1[more]
BLAST of Cucsa.099760 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G37200.13.6e-1436.36 RING/U-box superfamily protein[more]
AT3G19950.16.1e-1438.10 RING/U-box superfamily protein[more]
AT5G64920.13.7e-1137.76 COP1-interacting protein 8[more]
AT3G13430.14.8e-1141.25 RING/U-box superfamily protein[more]
AT3G56580.26.3e-1138.36 RING/U-box superfamily protein[more]
BLAST of Cucsa.099760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778730084|ref|XP_011659694.1|2.3e-12498.64PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus][more]
gi|449454422|ref|XP_004144954.1|1.5e-12397.73PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus][more]
gi|778697402|ref|XP_011654314.1|3.1e-4449.77PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus][more]
gi|659100547|ref|XP_008451147.1|1.1e-2538.46PREDICTED: E3 ubiquitin-protein ligase ATL59-like [Cucumis melo][more]
gi|700211049|gb|KGN66145.1|4.7e-2438.46hypothetical protein Csa_1G573640 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.099760.1Cucsa.099760.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 162..205
score: 7.4
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 163..204
score: 4.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 163..205
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 153..213
score: 1.8
NoneNo IPR availablePANTHERPTHR22763RING ZINC FINGER PROTEINcoord: 66..220
score: 2.4
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 162..211
score: 3.09

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.099760Csa7G025210Cucumber (Chinese Long) v2cgycuB111
Cucsa.099760CSPI07G01910Wild cucumber (PI 183967)cgycpiB112
Cucsa.099760CSPI07G01840Wild cucumber (PI 183967)cgycpiB113
Cucsa.099760CsaV3_7G001950Cucumber (Chinese Long) v3cgycucB116
Cucsa.099760Carg21356Silver-seed gourdcarcgyB0416
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.099760Cucumber (Chinese Long) v3cgycucB115
Cucsa.099760Watermelon (97103) v2cgywmbB125
Cucsa.099760Wax gourdcgywgoB145
Cucsa.099760Cucumber (Gy14) v1cgycgyB040
Cucsa.099760Cucumber (Gy14) v1cgycgyB041
Cucsa.099760Cucurbita maxima (Rimu)cgycmaB0215
Cucsa.099760Cucurbita maxima (Rimu)cgycmaB0216
Cucsa.099760Cucurbita maxima (Rimu)cgycmaB0217
Cucsa.099760Cucurbita maxima (Rimu)cgycmaB0218
Cucsa.099760Cucurbita moschata (Rifu)cgycmoB0212
Cucsa.099760Cucurbita moschata (Rifu)cgycmoB0208
Cucsa.099760Cucurbita moschata (Rifu)cgycmoB0210
Cucsa.099760Cucurbita moschata (Rifu)cgycmoB0211
Cucsa.099760Wild cucumber (PI 183967)cgycpiB111
Cucsa.099760Cucumber (Chinese Long) v2cgycuB110
Cucsa.099760Melon (DHL92) v3.5.1cgymeB120
Cucsa.099760Melon (DHL92) v3.5.1cgymeB119
Cucsa.099760Watermelon (Charleston Gray)cgywcgB130
Cucsa.099760Watermelon (97103) v1cgywmB130
Cucsa.099760Cucurbita pepo (Zucchini)cgycpeB0206
Cucsa.099760Cucurbita pepo (Zucchini)cgycpeB0207
Cucsa.099760Cucurbita pepo (Zucchini)cgycpeB0208
Cucsa.099760Cucurbita pepo (Zucchini)cgycpeB0210
Cucsa.099760Bottle gourd (USVL1VR-Ls)cgylsiB121
Cucsa.099760Bottle gourd (USVL1VR-Ls)cgylsiB122
Cucsa.099760Melon (DHL92) v3.6.1cgymedB116
Cucsa.099760Melon (DHL92) v3.6.1cgymedB118
Cucsa.099760Melon (DHL92) v3.6.1cgymedB120
Cucsa.099760Silver-seed gourdcarcgyB0237
Cucsa.099760Silver-seed gourdcarcgyB0405
Cucsa.099760Silver-seed gourdcarcgyB0973
Cucsa.099760Silver-seed gourdcarcgyB1183