CSPI07G01910 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI07G01910
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RING finger protein 126
Location	Chr7 : 1641874 .. 1642566 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTTGCTATTTCCAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCGCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTCATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGAGGAGGAGGAGGAGGAGTACTCATGGTGA

mRNA sequence

ATGTCTTTTGCTATTTCCAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCGCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTCATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGAGGAGGAGGAGGAGGAGTACTCATGGTGA

Coding sequence (CDS)

ATGTCTTTTGCTATTTCCAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCGCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTCATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGAGGAGGAGGAGGAGGAGTACTCATGGTGA

Homology

[Close]

BLAST of CSPI07G01910 vs. Swiss-Prot
Match: RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11
Identity = 30/84 (35.71%), Postives = 48/84 (57.14%), Query Frame = 1


Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +      ++  +    E+  C++C+DE   +  +V ++PC HV+H+ C+  WL
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 248

Query: 206 ENHNSCPLCRKPLHHDEEEEEEYS 230
           E HNSCP+CR  L  D+ + E  S
Sbjct: 249 ELHNSCPVCRFELPTDDPDYENRS 271

[Close]

BLAST of CSPI07G01910 vs. Swiss-Prot
Match: RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 29/81 (35.80%), Postives = 43/81 (53.09%), Query Frame = 1


Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +       +       E   C++C+D+   E  E  ++PC H+YH+ C+  WL
Sbjct: 197 PPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWL 256

Query: 206 ENHNSCPLCRKPLHHDEEEEE 227
           E HNSCP+CR  L  D+ + E
Sbjct: 257 ELHNSCPVCRHELPTDDPDYE 276

[Close]

BLAST of CSPI07G01910 vs. Swiss-Prot
Match: YGI4_SCHPO (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.04c PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.1e-10
Identity = 33/90 (36.67%), Postives = 55/90 (61.11%), Query Frame = 1


Query: 135 GAEETVVLDEAPPAVKRGVGVARG--ERLRSEEKMEELGDCSICLDELS-CEKREVMRIP 194
           G E     +   P VKR V  A    E L +++ M+    C IC D+++  ++++  ++P
Sbjct: 69  GGENDPFANPFQPPVKRAVKEAWDSFEPLSNDQLMDLT--CPICYDDMNENDEKQATKMP 128

Query: 195 CGHVYHESCIFKWLENHNSCPLCRKPLHHD 222
           CGH++ ++C+ KWLENH +CPLCRK + H+
Sbjct: 129 CGHIFGKNCLQKWLENHCTCPLCRKEVPHE 156

[Close]

BLAST of CSPI07G01910 vs. Swiss-Prot
Match: CIP8_ARATH (E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.4e-09
Identity = 37/98 (37.76%), Postives = 48/98 (48.98%), Query Frame = 1


Query: 130 GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMR 189
           GGGG G         APPA K  +       + S E  E +  C++C D +   +    +
Sbjct: 221 GGGGGGRRG------APPAAKSAIEALETFEVSSSEG-EMVMVCAVCKDGMVMGETG-KK 280

Query: 190 IPCGHVYHESCIFKWLENHNSCPLCRKPLHHDEEEEEE 228
           +PCGH YH  CI  WL   NSCP+CR  L  D+ E EE
Sbjct: 281 LPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEE 310

[Close]

BLAST of CSPI07G01910 vs. Swiss-Prot
Match: RN181_XENTR (E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.5e-09
Identity = 35/83 (42.17%), Postives = 43/83 (51.81%), Query Frame = 1


Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K+ V       +  E+    L  C +CL E   E   V ++PC H++H SCI  WL
Sbjct: 53  PPAAKKVVESLPKVTVTPEQADAAL-KCPVCLLEFE-EGETVRQLPCEHLFHSSCILPWL 112

Query: 206 ENHNSCPLCRKPLHHDEEEEEEY 229
              NSCPLCR  L  D  E EEY
Sbjct: 113 GKTNSCPLCRHELPTDSPEYEEY 133

[Close]

BLAST of CSPI07G01910 vs. TrEMBL
Match: A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.7e-129
Identity = 227/230 (98.70%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDEEEEEEYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHD+++EEEYSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW 230

[Close]

BLAST of CSPI07G01910 vs. TrEMBL
Match: A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.7e-129
Identity = 227/230 (98.70%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDEEEEEEYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHD+E++EEYSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 230

[Close]

BLAST of CSPI07G01910 vs. TrEMBL
Match: A0A0A0KYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 8.9e-49
Identity = 116/225 (51.56%), Postives = 152/225 (67.56%), Query Frame = 1


Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSF IS+PI Y L A+G G NGVL+V +S++++ ISVS  + R   +L++T   P++NAL
Sbjct: 1   MSFEISSPIPYLLNANGFG-NGVLEVQLSYLERAISVSSFSQR---ILYETQPTPFNNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAEV 120
           FYLS+ QLQ PLF+I Q L SLNIR    + +AR+IAS +  M + N+   +NF+++A V
Sbjct: 61  FYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASFVAHMCNGNTGWNSNFYVIARV 120

Query: 121 DFIRLIWLPSMGGGGAGAEETVVLDEAPPAVK-RGVGVARGERLRSEEKMEELGDCSICL 180
           D +R+I +                +E P A   RGV V R  +L+SEE   E GDCS+CL
Sbjct: 121 DLVRVIRI----------------EEQPRAEGWRGVAVERLSKLKSEE---EKGDCSVCL 180

Query: 181 DELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRK--PLHH 221
           DEL CEKREV+RIPCGHVYHESCIFKWL + NSCPLCR   PLH+
Sbjct: 181 DELDCEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

[Close]

BLAST of CSPI07G01910 vs. TrEMBL
Match: A0A0A0LW68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573640 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.2e-26
Identity = 83/225 (36.89%), Postives = 118/225 (52.44%), Query Frame = 1


Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRI--PYHN 60
           M+F   + I++R+   G   +   QV    IQ+ IS S +   P +++HQT  I   Y N
Sbjct: 1   MAFPTFHQIEFRVQHVGPSNHRFHQV--LEIQRRISHSLMFNFPPQIIHQTLPILLDYDN 60

Query: 61  ALFYL------SLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNF 120
             F L      S  +  S  FY+ Q+ SSLNI   AS+ MAR I     Q+ + NS  +F
Sbjct: 61  NFFPLHFNFFHSYGEPSSFTFYVAQLFSSLNINSIASEAMARNIFLIANQVANENSNASF 120

Query: 121 HILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180
           HI   +DFI   W+  +    + +   +  +E     ++ +G              +LGD
Sbjct: 121 HIAVIIDFINFTWMCPL----SFSTRQLTGNEVSMVEQKKIG-------------NDLGD 180

Query: 181 CSICLDELSCEKREV-MRIPCGHVYHESCIFKWLENHNSCPLCRK 217
           CSICLDELS   REV ++I CGHVYHE CI +WL+N +SCPLCR+
Sbjct: 181 CSICLDELSPSNREVVLKISCGHVYHELCILRWLDNSDSCPLCRR 206

[Close]

BLAST of CSPI07G01910 vs. TrEMBL
Match: A0A0A0LHS2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.7e-21
Identity = 83/232 (35.78%), Postives = 118/232 (50.86%), Query Frame = 1


Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGR-PHEVLHQTPRIPYHNA 60
           MSF+ ++ +Q   ++     +  L V + F  ++IS S      P  +L QTP      A
Sbjct: 1   MSFSATSCVQCS-FSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEA 60

Query: 61  LFYLSLRQLQSPL------FYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFH 120
           LF  SL  LQ PL      + + + L S N+R +  + ++  I S   Q  D N+E  F 
Sbjct: 61  LF--SLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQF-DINNEC-FK 120

Query: 121 ILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSE-------EK 180
           I   VD+I+  W  +          TV  +  PP   RG   +  ER++ +       E+
Sbjct: 121 IETNVDYIKEYWTEA--APELYPISTVGEEGLPP---RGASESAIERVKKQKFDGFRGEE 180

Query: 181 MEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 219
            EE+GDCS+C +E+  +  EV RIPCGHVYH+SCI KWLE  NSCPLCR  L
Sbjct: 181 EEEIGDCSVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAAL 222

[Close]

BLAST of CSPI07G01910 vs. TAIR10
Match: AT5G37200.1 (AT5G37200.1 RING/U-box superfamily protein)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-13
Identity = 34/98 (34.69%), Postives = 57/98 (58.16%), Query Frame = 1


Query: 137 EETVVLDEAPPAVKRGVG------VARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 196
           E  V+    P  + RG        +   +R+ S +  EE   CSIC+++ S    +++R+
Sbjct: 117 ERRVIFPHGPSLLSRGASGEVFHRLVEEQRVESADLEEEDETCSICIEKFSESHEDIIRV 176

Query: 197 P-CGHVYHESCIFKWLENHNSCPLCRKPLHHDEEEEEE 228
           P C H++H+ C+F+WL   NSCPLCRK  + +E+E+E+
Sbjct: 177 PDCLHLFHQGCLFEWLGLQNSCPLCRKVPYEEEDEDED 214

[Close]

BLAST of CSPI07G01910 vs. TAIR10
Match: AT3G19950.1 (AT3G19950.1 RING/U-box superfamily protein)

HSP 1 Score: 70.9 bits (172), Expect = 1.2e-12
Identity = 30/84 (35.71%), Postives = 48/84 (57.14%), Query Frame = 1


Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +      ++  +    E+  C++C+DE   +  +V ++PC HV+H+ C+  WL
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 248

Query: 206 ENHNSCPLCRKPLHHDEEEEEEYS 230
           E HNSCP+CR  L  D+ + E  S
Sbjct: 249 ELHNSCPVCRFELPTDDPDYENRS 271

[Close]

BLAST of CSPI07G01910 vs. TAIR10
Match: AT3G56580.2 (AT3G56580.2 RING/U-box superfamily protein)

HSP 1 Score: 65.5 bits (158), Expect = 5.0e-11
Identity = 28/73 (38.36%), Postives = 37/73 (50.68%), Query Frame = 1


Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +      ++  +        C +C DE    K E  ++PC H+YH  CI  WL
Sbjct: 159 PPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFEL-KSEAKQMPCHHIYHSDCIVPWL 218

Query: 206 ENHNSCPLCRKPL 219
             HNSCP+CRK L
Sbjct: 219 VQHNSCPVCRKEL 230

[Close]

BLAST of CSPI07G01910 vs. TAIR10
Match: AT5G64920.1 (AT5G64920.1 COP1-interacting protein 8)

HSP 1 Score: 63.2 bits (152), Expect = 2.5e-10
Identity = 37/98 (37.76%), Postives = 48/98 (48.98%), Query Frame = 1


Query: 130 GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMR 189
           GGGG G         APPA K  +       + S E  E +  C++C D +   +    +
Sbjct: 221 GGGGGGRRG------APPAAKSAIEALETFEVSSSEG-EMVMVCAVCKDGMVMGETG-KK 280

Query: 190 IPCGHVYHESCIFKWLENHNSCPLCRKPLHHDEEEEEE 228
           +PCGH YH  CI  WL   NSCP+CR  L  D+ E EE
Sbjct: 281 LPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAEYEE 310

[Close]

BLAST of CSPI07G01910 vs. TAIR10
Match: AT5G37230.1 (AT5G37230.1 RING/U-box superfamily protein)

HSP 1 Score: 61.6 bits (148), Expect = 7.3e-10
Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 1


Query: 159 ERLRSEEKME--ELGD-----CSICLDELS-CEKREVMRIP-CGHVYHESCIFKWLENHN 218
           +RL  E+ ME   LGD     CSIC+++ S      ++ +P C H++H+SCIFKWL+   
Sbjct: 132 QRLLEEQTMELTNLGDEEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQR 191

Query: 219 SCPLCRKPLHHDEEEEE 227
           SCPLCR+  + ++ E E
Sbjct: 192 SCPLCRRVPYEEDLETE 208

[Close]

BLAST of CSPI07G01910 vs. NCBI nr
Match: gi|449454422|ref|XP_004144954.1| (PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 2.5e-129
Identity = 227/230 (98.70%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDEEEEEEYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHD+E++EEYSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 230

[Close]

BLAST of CSPI07G01910 vs. NCBI nr
Match: gi|778730084|ref|XP_011659694.1| (PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 2.5e-129
Identity = 227/230 (98.70%), Postives = 230/230 (100.00%), Query Frame = 1


Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDEEEEEEYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHD+++EEEYSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW 230

[Close]

BLAST of CSPI07G01910 vs. NCBI nr
Match: gi|778697402|ref|XP_011654314.1| (PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48
Identity = 116/225 (51.56%), Postives = 152/225 (67.56%), Query Frame = 1


Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSF IS+PI Y L A+G G NGVL+V +S++++ ISVS  + R   +L++T   P++NAL
Sbjct: 1   MSFEISSPIPYLLNANGFG-NGVLEVQLSYLERAISVSSFSQR---ILYETQPTPFNNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAEV 120
           FYLS+ QLQ PLF+I Q L SLNIR    + +AR+IAS +  M + N+   +NF+++A V
Sbjct: 61  FYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASFVAHMCNGNTGWNSNFYVIARV 120

Query: 121 DFIRLIWLPSMGGGGAGAEETVVLDEAPPAVK-RGVGVARGERLRSEEKMEELGDCSICL 180
           D +R+I +                +E P A   RGV V R  +L+SEE   E GDCS+CL
Sbjct: 121 DLVRVIRI----------------EEQPRAEGWRGVAVERLSKLKSEE---EKGDCSVCL 180

Query: 181 DELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRK--PLHH 221
           DEL CEKREV+RIPCGHVYHESCIFKWL + NSCPLCR   PLH+
Sbjct: 181 DELDCEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLHN 199

[Close]

BLAST of CSPI07G01910 vs. NCBI nr
Match: gi|659108614|ref|XP_008454295.1| (PREDICTED: uncharacterized protein LOC103494735 isoform X1 [Cucumis melo])

HSP 1 Score: 125.9 bits (315), Expect = 8.9e-26
Identity = 79/161 (49.07%), Postives = 112/161 (69.57%), Query Frame = 1


Query: 1   MSFAISNPIQYRLYASGTG-GNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNA 60
           MSFAIS+PIQY L  +GTG GNGVL++ +S+++++IS+S ++ R   +L++T  IP++NA
Sbjct: 1   MSFAISSPIQYLL--NGTGFGNGVLEIQLSYVERVISISSVSQR---ILYETQPIPFNNA 60

Query: 61  LFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAE 120
            FYLS+  LQ PLFYI Q L SLNIR    +N+AR+IAS++  M + N+   +NF+++A 
Sbjct: 61  HFYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIAR 120

Query: 121 VDFIRLIWL--PSM---GGGGAGAEETVVLDEAPPAVKRGV 154
           VD +R I +   SM   GGG     ETVV DE P A +RGV
Sbjct: 121 VDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGV 152

[Close]

BLAST of CSPI07G01910 vs. NCBI nr
Match: gi|700211049|gb|KGN66145.1| (hypothetical protein Csa_1G573640 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 8.9e-26
Identity = 83/225 (36.89%), Postives = 118/225 (52.44%), Query Frame = 1


Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRI--PYHN 60
           M+F   + I++R+   G   +   QV    IQ+ IS S +   P +++HQT  I   Y N
Sbjct: 1   MAFPTFHQIEFRVQHVGPSNHRFHQV--LEIQRRISHSLMFNFPPQIIHQTLPILLDYDN 60

Query: 61  ALFYL------SLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNF 120
             F L      S  +  S  FY+ Q+ SSLNI   AS+ MAR I     Q+ + NS  +F
Sbjct: 61  NFFPLHFNFFHSYGEPSSFTFYVAQLFSSLNINSIASEAMARNIFLIANQVANENSNASF 120

Query: 121 HILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180
           HI   +DFI   W+  +    + +   +  +E     ++ +G              +LGD
Sbjct: 121 HIAVIIDFINFTWMCPL----SFSTRQLTGNEVSMVEQKKIG-------------NDLGD 180

Query: 181 CSICLDELSCEKREV-MRIPCGHVYHESCIFKWLENHNSCPLCRK 217
           CSICLDELS   REV ++I CGHVYHE CI +WL+N +SCPLCR+
Sbjct: 181 CSICLDELSPSNREVVLKISCGHVYHELCILRWLDNSDSCPLCRR 206

The following BLAST results are available for this feature:

BLAST of CSPI07G01910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RNG1L_ARATH	2.1e-11	35.71	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana GN=At3g19950 PE=1...	[more]
RING1_GOSHI	1.8e-10	35.80	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1 PE=1 SV=1	[more]
YGI4_SCHPO	3.1e-10	36.67	Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai...	[more]
CIP8_ARATH	4.4e-09	37.76	E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8 PE=1 SV=1	[more]
RN181_XENTR	7.5e-09	42.17	E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181 PE=2 SV=1	[more]

BLAST of CSPI07G01910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K696_CUCSA	1.7e-129	98.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G026750 PE=4 SV=1	[more]
A0A0A0K2W2_CUCSA	1.7e-129	98.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G025210 PE=4 SV=1	[more]
A0A0A0KYC0_CUCSA	8.9e-49	51.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003650 PE=4 SV=1	[more]
A0A0A0LW68_CUCSA	6.2e-26	36.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573640 PE=4 SV=1	[more]
A0A0A0LHS2_CUCSA	2.7e-21	35.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G130680 PE=4 SV=1	[more]

BLAST of CSPI07G01910 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G37200.1	1.1e-13	34.69	RING/U-box superfamily protein	[more]
AT3G19950.1	1.2e-12	35.71	RING/U-box superfamily protein	[more]
AT3G56580.2	5.0e-11	38.36	RING/U-box superfamily protein	[more]
AT5G64920.1	2.5e-10	37.76	COP1-interacting protein 8	[more]
AT5G37230.1	7.3e-10	41.56	RING/U-box superfamily protein	[more]

BLAST of CSPI07G01910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449454422\|ref\|XP_004144954.1\|	2.5e-129	98.70	PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus]	[more]
gi\|778730084\|ref\|XP_011659694.1\|	2.5e-129	98.70	PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus]	[more]
gi\|778697402\|ref\|XP_011654314.1\|	1.3e-48	51.56	PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus]	[more]
gi\|659108614\|ref\|XP_008454295.1\|	8.9e-26	49.07	PREDICTED: uncharacterized protein LOC103494735 isoform X1 [Cucumis melo]	[more]
gi\|700211049\|gb\|KGN66145.1\|	8.9e-26	36.89	hypothetical protein Csa_1G573640 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI07G01910.1	CSPI07G01910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 172..215 score: 8.0
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 173..214 score: 4.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 173..215 score: 13
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 168..224 score: 2.5
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 162..227 score: 8.3E-18coord: 19..38 score: 8.3
None	No IPR available	PANTHER	PTHR22763:SF3	E3 UBIQUITIN-PROTEIN LIGASE RNF115	coord: 162..227 score: 8.3E-18coord: 19..38 score: 8.3
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 172..221 score: 4.42

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI07G01910	Csa7G026750	Cucumber (Chinese Long) v2	cpicuB354
CSPI07G01910	CsaV3_7G002010	Cucumber (Chinese Long) v3	cpicucB415
CSPI07G01910	Cucsa.099760	Cucumber (Gy14) v1	cgycpiB112
CSPI07G01910	CsGy7G001870	Cucumber (Gy14) v2	cgybcpiB332

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI07G01910	Silver-seed gourd	carcpiB0235
CSPI07G01910	Silver-seed gourd	carcpiB1103
CSPI07G01910	Watermelon (97103) v2	cpiwmbB553
CSPI07G01910	Wax gourd	cpiwgoB681
CSPI07G01910	Cucurbita maxima (Rimu)	cmacpiB149
CSPI07G01910	Cucurbita maxima (Rimu)	cmacpiB533
CSPI07G01910	Cucurbita moschata (Rifu)	cmocpiB131
CSPI07G01910	Cucurbita moschata (Rifu)	cmocpiB524
CSPI07G01910	Cucurbita pepo (Zucchini)	cpecpiB692