CsaV3_7G002010 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G002010
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionRing-finger e3 ubiquitin-protein ligase
Locationchr7 : 1627096 .. 1627975 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTTTGCTATTTCTAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCCCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGATAATTCATCCATTCTTTTTTGTGAAGTTTTTCGTAATTGGGATTCTAATTCTATCAATTACTCTTTCTTCCCAAAGGGAAGAGAAGAAAATTCTTCAATCCTCTGTATTCTTTTACTACATCTGGTAGTAATGATCACAACTTTAGCAATGTTAATAGTAATACTATGCACAGATTCAAATCTTGTT

mRNA sequence

ATGTCTTTTGCTATTTCTAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCCCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGA

Coding sequence (CDS)

ATGTCTTTTGCTATTTCTAATCCCATTCAGTACCGTCTCTACGCCTCCGGCACCGGAGGCAATGGAGTATTACAAGTTAATATAAGCTTTATCCAACAAATCATCTCTGTTTCTCCCCTCACCGGACGTCCCCATGAAGTCCTCCATCAAACTCCAAGGATTCCGTACCACAATGCTCTCTTTTATCTCTCCTTACGCCAACTCCAAAGTCCGTTGTTCTACATCACTCAAATTCTCTCCTCACTCAACATCCGCCCTGCCGCTTCCCAAAACATGGCTCGTCGTATCGCTTCCCACATCCTACAAATGCCTGACAGAAACAGCGAGACGAATTTCCATATCCTCGCTGAAGTGGATTTCATTCGACTGATTTGGCTGCCATCAATGGGTGGAGGCGGTGCAGGGGCGGAGGAAACAGTTGTGTTGGATGAAGCTCCGCCGGCAGTGAAGAGGGGAGTGGGGGTGGCGAGGGGAGAGAGGTTGAGATCGGAAGAAAAGATGGAGGAATTGGGAGATTGCAGCATCTGTTTGGATGAATTGAGTTGTGAAAAGAGGGAGGTGATGAGGATTCCTTGTGGCCATGTTTACCATGAATCGTGCATCTTCAAGTGGCTTGAGAATCACAATTCTTGTCCTTTGTGTAGAAAGCCATTGCACCACGACGACGACGACGAGGAGGAGTACTCATGGTGA

Protein sequence

MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNALFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDFIRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDDDEEEYSW
Homology
[Close]
BLAST of CsaV3_7G002010 vs. NCBI nr
Match: XP_004144954.1 (PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hypothetical protein Csa_7G025210 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 2.1e-124
Identity = 222/230 (96.52%), Postives = 222/230 (96.52%), Query Frame = 0 

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHXXXXXXXXYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLH        YSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 230

[Close]
BLAST of CsaV3_7G002010 vs. NCBI nr
Match: XP_011659694.1 (PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus] >KGN43356.1 hypothetical protein Csa_7G026750 [Cucumis sativus])

HSP 1 Score: 454.5 bits (1168), Expect = 2.1e-124
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHXXXXXXXXYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHXXXXXXXXYSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHXXXXXXXXYSW 230

[Close]
BLAST of CsaV3_7G002010 vs. NCBI nr
Match: XP_016899530.1 (PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo])

HSP 1 Score: 384.4 bits (986), Expect = 2.7e-103
Identity = 183/219 (83.56%), Postives = 203/219 (92.69%), Query Frame = 0 

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLY SGTGGNG+L+V ISF +Q+IS+SP+TGRPH++LHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYGSGTGGNGILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
            YL+LRQLQSPLFYITQ LSSLNIRPAASQ+MAR+IASHILQMPDRN + NFHI+AEVDF
Sbjct: 61  VYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHIIAEVDF 120

Query: 121 IRLIWLP-SMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDE 180
           IR+IWL       GAGAEETVV DEAPPA+KRGVG ARGERL+SEEK+E+LGDCSICLDE
Sbjct: 121 IRVIWLELEEQSMGAGAEETVVFDEAPPALKRGVGKARGERLKSEEKVEDLGDCSICLDE 180

Query: 181 LSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 219
           LSCEKREV+RIPCGHVYHESCIFKWL+NHNSCPLCRKPL
Sbjct: 181 LSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPL 219

[Close]
BLAST of CsaV3_7G002010 vs. NCBI nr
Match: XP_016901482.1 (PREDICTED: uncharacterized protein LOC107991269 [Cucumis melo])

HSP 1 Score: 223.4 bits (568), Expect = 7.9e-55
Identity = 125/223 (56.05%), Postives = 163/223 (73.09%), Query Frame = 0 

Query: 1   MSFAISNPIQYRLYASGTG-GNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNA 60
           MSFAIS+PIQY L  +GTG GNGVL++ +S+++++IS+S ++ R   +L++T  IP++NA
Sbjct: 1   MSFAISSPIQYLL--NGTGFGNGVLEIQLSYVERVISISSVSQR---ILYETQPIPFNNA 60

Query: 61  LFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAE 120
            FYLS+  LQ PLFYI Q L SLNIR    +N+AR+IAS++  M + N+   +NF+++A 
Sbjct: 61  HFYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIAR 120

Query: 121 VDFIRLIWL--PSM---GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180
           VD +R I +   SM   GGG     ETVV DE P A +RGV V  GERLR  +  EE GD
Sbjct: 121 VDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGVVV--GERLRKLKSEEEEGD 180

Query: 181 CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR 216
           CS+CLDEL C KREV+RIPCGHVYHESCIF+WL N+NSCPLCR
Sbjct: 181 CSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCR 212

[Close]
BLAST of CsaV3_7G002010 vs. NCBI nr
Match: XP_011654314.1 (PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus] >KGN52851.1 hypothetical protein Csa_4G003650 [Cucumis sativus])

HSP 1 Score: 201.4 bits (511), Expect = 3.2e-48
Identity = 116/224 (51.79%), Postives = 151/224 (67.41%), Query Frame = 0 

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSF IS+PI Y L A+G  GNGVL+V +S++++ ISVS  + R   +L++T   P++NAL
Sbjct: 1   MSFEISSPIPYLLNANGF-GNGVLEVQLSYLERAISVSSFSQR---ILYETQPTPFNNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAEV 120
           FYLS+ QLQ PLF+I Q L SLNIR    + +AR+IAS +  M + N+   +NF+++A V
Sbjct: 61  FYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASFVAHMCNGNTGWNSNFYVIARV 120

Query: 121 DFIRLIWLPSMGGGGAGAEETVVLDEAPPAVK-RGVGVARGERLRSEEKMEELGDCSICL 180
           D +R+I                 ++E P A   RGV V R  +L+SE   EE GDCS+CL
Sbjct: 121 DLVRVI----------------RIEEQPRAEGWRGVAVERLSKLKSE---EEKGDCSVCL 180

Query: 181 DELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRK--PLH 220
           DEL CEKREV+RIPCGHVYHESCIFKWL + NSCPLCR   PLH
Sbjct: 181 DELDCEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLH 198

[Close]
BLAST of CsaV3_7G002010 vs. TAIR10
Match: AT3G19950.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 7.7e-12
Identity = 26/70 (37.14%), Postives = 42/70 (60.00%), Query Frame = 0 

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +      ++  +    E+  C++C+DE   +  +V ++PC HV+H+ C+  WL
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 248

Query: 206 ENHNSCPLCR 216
           E HNSCP+CR
Sbjct: 249 ELHNSCPVCR 257

[Close]
BLAST of CsaV3_7G002010 vs. TAIR10
Match: AT5G37200.1 (RING/U-box superfamily protein)

HSP 1 Score: 68.2 bits (165), Expect = 7.7e-12
Identity = 31/87 (35.63%), Postives = 49/87 (56.32%), Query Frame = 0 

Query: 137 EETVVLDEAPPAVKRGVG------VARGERLRSEEKMEELGDCSICLDELSCEKREVMRI 196
           E  V+    P  + RG        +   +R+ S +  EE   CSIC+++ S    +++R+
Sbjct: 117 ERRVIFPHGPSLLSRGASGEVFHRLVEEQRVESADLEEEDETCSICIEKFSESHEDIIRV 176

Query: 197 P-CGHVYHESCIFKWLENHNSCPLCRK 217
           P C H++H+ C+F+WL   NSCPLCRK
Sbjct: 177 PDCLHLFHQGCLFEWLGLQNSCPLCRK 203

[Close]
BLAST of CsaV3_7G002010 vs. TAIR10
Match: AT3G56580.2 (RING/U-box superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 6.6e-11
Identity = 28/73 (38.36%), Postives = 37/73 (50.68%), Query Frame = 0 

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +      ++  +        C +C DE    K E  ++PC H+YH  CI  WL
Sbjct: 159 PPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFEL-KSEAKQMPCHHIYHSDCIVPWL 218

Query: 206 ENHNSCPLCRKPL 219
             HNSCP+CRK L
Sbjct: 219 VQHNSCPVCRKEL 230

[Close]
BLAST of CsaV3_7G002010 vs. TAIR10
Match: AT2G40830.2 (RING-H2 finger C1A)

HSP 1 Score: 61.2 bits (147), Expect = 9.5e-10
Identity = 25/73 (34.25%), Postives = 36/73 (49.32%), Query Frame = 0 

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA +  +      ++          +C +C DE      E  ++PC H+YH  CI  WL
Sbjct: 163 PPAPRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGS-EAKQMPCNHIYHSDCIVPWL 222

Query: 206 ENHNSCPLCRKPL 219
             HNSCP+CR+ L
Sbjct: 223 VQHNSCPVCRQEL 234

[Close]
BLAST of CsaV3_7G002010 vs. TAIR10
Match: AT3G30460.1 (RING/U-box superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09
Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 0 

Query: 163 SEEKMEE-LGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR 216
           +EE ME  L  C+IC +EL+  +R +  +PC H YH+ CI  WL N N+CPLCR
Sbjct: 86  AEEMMERGLVVCAICREELAANER-LSELPCRHYYHKECISNWLSNRNTCPLCR 138

[Close]
BLAST of CsaV3_7G002010 vs. Swiss-Prot
Match: sp|Q8LPN7|RNG1L_ARATH (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 26/70 (37.14%), Postives = 42/70 (60.00%), Query Frame = 0 

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +      ++  +    E+  C++C+DE   +  +V ++PC HV+H+ C+  WL
Sbjct: 189 PPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQDCLLPWL 248

Query: 206 ENHNSCPLCR 216
           E HNSCP+CR
Sbjct: 249 ELHNSCPVCR 257

[Close]
BLAST of CsaV3_7G002010 vs. Swiss-Prot
Match: sp|P0CH30|RING1_GOSHI (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.3e-10
Identity = 27/73 (36.99%), Postives = 39/73 (53.42%), Query Frame = 0 

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +       +       E   C++C+D+   E  E  ++PC H+YH+ C+  WL
Sbjct: 197 PPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCLLPWL 256

Query: 206 ENHNSCPLCRKPL 219
           E HNSCP+CR  L
Sbjct: 257 ELHNSCPVCRHEL 268

[Close]
BLAST of CsaV3_7G002010 vs. Swiss-Prot
Match: sp|Q94AK4|RZF1_ARATH (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 28/73 (38.36%), Postives = 37/73 (50.68%), Query Frame = 0 

Query: 146 PPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHVYHESCIFKWL 205
           PPA K  +      ++  +        C +C DE    K E  ++PC H+YH  CI  WL
Sbjct: 159 PPAPKSSIDALPTIKITQKHLKSSDSHCPVCKDEFEL-KSEAKQMPCHHIYHSDCIVPWL 218

Query: 206 ENHNSCPLCRKPL 219
             HNSCP+CRK L
Sbjct: 219 VQHNSCPVCRKEL 230

[Close]
BLAST of CsaV3_7G002010 vs. Swiss-Prot
Match: sp|Q6AVN2|SIRP1_ORYSJ (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0 

Query: 136 AEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDELSCEKREVMRIPCGHV 195
           AE     +  PPA K  V     E L +  K+EE+  CS+CLD+L     +  ++PC H 
Sbjct: 168 AESDPSRNGTPPAKKEAV-----EALPT-VKIEEVVSCSVCLDDLEVGS-QAKQMPCEHK 227

Query: 196 YHESCIFKWLENHNSCPLCR 216
           +H SCI  WLE H+SCP+CR
Sbjct: 228 FHSSCILPWLELHSSCPVCR 240

[Close]
BLAST of CsaV3_7G002010 vs. Swiss-Prot
Match: sp|Q9Y7K6|YGI4_SCHPO (Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC2A9.04c PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-09
Identity = 32/85 (37.65%), Postives = 52/85 (61.18%), Query Frame = 0 

Query: 135 GAEETVVLDEAPPAVKRGVGVA--RGERLRSEEKMEELGDCSICLDELS-CEKREVMRIP 194
           G E     +   P VKR V  A    E L +++ M+    C IC D+++  ++++  ++P
Sbjct: 69  GGENDPFANPFQPPVKRAVKEAWDSFEPLSNDQLMDL--TCPICYDDMNENDEKQATKMP 128

Query: 195 CGHVYHESCIFKWLENHNSCPLCRK 217
           CGH++ ++C+ KWLENH +CPLCRK
Sbjct: 129 CGHIFGKNCLQKWLENHCTCPLCRK 151

[Close]
BLAST of CsaV3_7G002010 vs. TrEMBL
Match: tr|A0A0A0K696|A0A0A0K696_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.4e-124
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHXXXXXXXXYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHXXXXXXXXYSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHXXXXXXXXYSW 230

[Close]
BLAST of CsaV3_7G002010 vs. TrEMBL
Match: tr|A0A0A0K2W2|A0A0A0K2W2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.4e-124
Identity = 222/230 (96.52%), Postives = 222/230 (96.52%), Query Frame = 0 

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
           FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF
Sbjct: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120

Query: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180
           IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL
Sbjct: 121 IRLIWLPSMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDEL 180

Query: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHXXXXXXXXYSW 231
           SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLH        YSW
Sbjct: 181 SCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPLHHDDEDDEEYSW 230

[Close]
BLAST of CsaV3_7G002010 vs. TrEMBL
Match: tr|A0A1S4DUZ4|A0A1S4DUZ4_CUCME (E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 1.8e-103
Identity = 183/219 (83.56%), Postives = 203/219 (92.69%), Query Frame = 0 

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSFAISNPIQYRLY SGTGGNG+L+V ISF +Q+IS+SP+TGRPH++LHQTPRIPYHNAL
Sbjct: 1   MSFAISNPIQYRLYGSGTGGNGILEVRISFFEQMISLSPVTGRPHQILHQTPRIPYHNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNSETNFHILAEVDF 120
            YL+LRQLQSPLFYITQ LSSLNIRPAASQ+MAR+IASHILQMPDRN + NFHI+AEVDF
Sbjct: 61  VYLTLRQLQSPLFYITQFLSSLNIRPAASQSMARQIASHILQMPDRNGDRNFHIIAEVDF 120

Query: 121 IRLIWLP-SMGGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGDCSICLDE 180
           IR+IWL       GAGAEETVV DEAPPA+KRGVG ARGERL+SEEK+E+LGDCSICLDE
Sbjct: 121 IRVIWLELEEQSMGAGAEETVVFDEAPPALKRGVGKARGERLKSEEKVEDLGDCSICLDE 180

Query: 181 LSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRKPL 219
           LSCEKREV+RIPCGHVYHESCIFKWL+NHNSCPLCRKPL
Sbjct: 181 LSCEKREVIRIPCGHVYHESCIFKWLKNHNSCPLCRKPL 219

[Close]
BLAST of CsaV3_7G002010 vs. TrEMBL
Match: tr|A0A1S4DZR1|A0A1S4DZR1_CUCME (uncharacterized protein LOC107991269 OS=Cucumis melo OX=3656 GN=LOC107991269 PE=4 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 5.3e-55
Identity = 125/223 (56.05%), Postives = 163/223 (73.09%), Query Frame = 0 

Query: 1   MSFAISNPIQYRLYASGTG-GNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNA 60
           MSFAIS+PIQY L  +GTG GNGVL++ +S+++++IS+S ++ R   +L++T  IP++NA
Sbjct: 1   MSFAISSPIQYLL--NGTGFGNGVLEIQLSYVERVISISSVSQR---ILYETQPIPFNNA 60

Query: 61  LFYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAE 120
            FYLS+  LQ PLFYI Q L SLNIR    +N+AR+IAS++  M + N+   +NF+++A 
Sbjct: 61  HFYLSVHHLQDPLFYIRQFLFSLNIR---RENIARQIASYVAHMCNGNTGRNSNFYVIAR 120

Query: 121 VDFIRLIWL--PSM---GGGGAGAEETVVLDEAPPAVKRGVGVARGERLRSEEKMEELGD 180
           VD +R I +   SM   GGG     ETVV DE P A +RGV V  GERLR  +  EE GD
Sbjct: 121 VDLVRAIRIEEESMWRDGGGVVVEAETVVFDEVPRA-RRGVVV--GERLRKLKSEEEEGD 180

Query: 181 CSICLDELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCR 216
           CS+CLDEL C KREV+RIPCGHVYHESCIF+WL N+NSCPLCR
Sbjct: 181 CSVCLDELDCGKREVIRIPCGHVYHESCIFEWLNNNNSCPLCR 212

[Close]
BLAST of CsaV3_7G002010 vs. TrEMBL
Match: tr|A0A0A0KYC0|A0A0A0KYC0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003650 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.1e-48
Identity = 116/224 (51.79%), Postives = 151/224 (67.41%), Query Frame = 0 

Query: 1   MSFAISNPIQYRLYASGTGGNGVLQVNISFIQQIISVSPLTGRPHEVLHQTPRIPYHNAL 60
           MSF IS+PI Y L A+G  GNGVL+V +S++++ ISVS  + R   +L++T   P++NAL
Sbjct: 1   MSFEISSPIPYLLNANGF-GNGVLEVQLSYLERAISVSSFSQR---ILYETQPTPFNNAL 60

Query: 61  FYLSLRQLQSPLFYITQILSSLNIRPAASQNMARRIASHILQMPDRNS--ETNFHILAEV 120
           FYLS+ QLQ PLF+I Q L SLNIR    + +AR+IAS +  M + N+   +NF+++A V
Sbjct: 61  FYLSVHQLQHPLFHIRQFLYSLNIR---RETIARQIASFVAHMCNGNTGWNSNFYVIARV 120

Query: 121 DFIRLIWLPSMGGGGAGAEETVVLDEAPPAVK-RGVGVARGERLRSEEKMEELGDCSICL 180
           D +R+I                 ++E P A   RGV V R  +L+SE   EE GDCS+CL
Sbjct: 121 DLVRVI----------------RIEEQPRAEGWRGVAVERLSKLKSE---EEKGDCSVCL 180

Query: 181 DELSCEKREVMRIPCGHVYHESCIFKWLENHNSCPLCRK--PLH 220
           DEL CEKREV+RIPCGHVYHESCIFKWL + NSCPLCR   PLH
Sbjct: 181 DELDCEKREVIRIPCGHVYHESCIFKWLNSSNSCPLCRSSFPLH 198

The following BLAST results are available for this feature:
BLAST of CsaV3_7G002010 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144954.12.1e-12496.52PREDICTED: uncharacterized protein LOC101214496 [Cucumis sativus] >KGN43349.1 hy... [more]
XP_011659694.12.1e-124100.00PREDICTED: uncharacterized protein LOC105436225 [Cucumis sativus] >KGN43356.1 hy... [more]
XP_016899530.12.7e-10383.56PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo][more]
XP_016901482.17.9e-5556.05PREDICTED: uncharacterized protein LOC107991269 [Cucumis melo][more]
XP_011654314.13.2e-4851.79PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Cucumis sativus] >KGN52851.1... [more]
BLAST of CsaV3_7G002010 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G19950.17.7e-1237.14RING/U-box superfamily protein[more]
AT5G37200.17.7e-1235.63RING/U-box superfamily protein[more]
AT3G56580.26.6e-1138.36RING/U-box superfamily protein[more]
AT2G40830.29.5e-1034.25RING-H2 finger C1A[more]
AT3G30460.11.2e-0950.00RING/U-box superfamily protein[more]
BLAST of CsaV3_7G002010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8LPN7|RNG1L_ARATH1.4e-1037.14E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19... [more]
sp|P0CH30|RING1_GOSHI5.3e-1036.99E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV... [more]
sp|Q94AK4|RZF1_ARATH1.2e-0938.36E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV... [more]
sp|Q6AVN2|SIRP1_ORYSJ2.0e-0942.50E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SI... [more]
sp|Q9Y7K6|YGI4_SCHPO2.6e-0937.65Uncharacterized RING finger protein C2A9.04c OS=Schizosaccharomyces pombe (strai... [more]
BLAST of CsaV3_7G002010 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K696|A0A0A0K696_CUCSA1.4e-124100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G026750 PE=4 SV=1[more]
tr|A0A0A0K2W2|A0A0A0K2W2_CUCSA1.4e-12496.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G025210 PE=4 SV=1[more]
tr|A0A1S4DUZ4|A0A1S4DUZ4_CUCME1.8e-10383.56E3 ubiquitin-protein ligase RNF181-like OS=Cucumis melo OX=3656 GN=LOC107990564 ... [more]
tr|A0A1S4DZR1|A0A1S4DZR1_CUCME5.3e-5556.05uncharacterized protein LOC107991269 OS=Cucumis melo OX=3656 GN=LOC107991269 PE=... [more]
tr|A0A0A0KYC0|A0A0A0KYC0_CUCSA2.1e-4851.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G003650 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G002010.1CsaV3_7G002010.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 173..214
e-value: 4.4E-8
score: 42.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 172..215
e-value: 1.5E-13
score: 50.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 173..215
score: 13.478
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 158..229
e-value: 7.8E-20
score: 71.8
NoneNo IPR availablePANTHERPTHR44683FAMILY NOT NAMEDcoord: 143..228
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 172..221

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G002010CSPI07G01910Wild cucumber (PI 183967)cpicucB415
CsaV3_7G002010Cp4.1LG16g03320Cucurbita pepo (Zucchini)cpecucB0367
CsaV3_7G002010CsGy7G001870Cucumber (Gy14) v2cgybcucB348
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G002010Cucumber (Chinese Long) v3cuccucB187
CsaV3_7G002010Cucumber (Chinese Long) v3cuccucB214
CsaV3_7G002010Silver-seed gourdcarcucB0232
CsaV3_7G002010Silver-seed gourdcarcucB0386
CsaV3_7G002010Silver-seed gourdcarcucB1114
CsaV3_7G002010Cucumber (Gy14) v2cgybcucB196
CsaV3_7G002010Cucumber (Gy14) v2cgybcucB306
CsaV3_7G002010Cucumber (Gy14) v1cgycucB116
CsaV3_7G002010Cucumber (Gy14) v1cgycucB160
CsaV3_7G002010Cucurbita maxima (Rimu)cmacucB0176
CsaV3_7G002010Cucurbita maxima (Rimu)cmacucB0638
CsaV3_7G002010Cucurbita maxima (Rimu)cmacucB0687
CsaV3_7G002010Cucurbita maxima (Rimu)cmacucB0766
CsaV3_7G002010Cucurbita moschata (Rifu)cmocucB0155
CsaV3_7G002010Cucurbita moschata (Rifu)cmocucB0622
CsaV3_7G002010Cucurbita moschata (Rifu)cmocucB0671
CsaV3_7G002010Cucurbita pepo (Zucchini)cpecucB0322
CsaV3_7G002010Cucurbita pepo (Zucchini)cpecucB0863
CsaV3_7G002010Wild cucumber (PI 183967)cpicucB375
CsaV3_7G002010Bottle gourd (USVL1VR-Ls)cuclsiB521
CsaV3_7G002010Bottle gourd (USVL1VR-Ls)cuclsiB529
CsaV3_7G002010Melon (DHL92) v3.5.1cucmeB534
CsaV3_7G002010Melon (DHL92) v3.5.1cucmeB555
CsaV3_7G002010Melon (DHL92) v3.6.1cucmedB521
CsaV3_7G002010Melon (DHL92) v3.6.1cucmedB543
CsaV3_7G002010Watermelon (Charleston Gray)cucwcgB571
CsaV3_7G002010Watermelon (97103) v1cucwmB634
CsaV3_7G002010Watermelon (97103) v2cucwmbB549
CsaV3_7G002010Wax gourdcucwgoB695