Csa6G423460 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAATGGCACCAAATCATAGCATCTTCAATTGAAGTCATAAACGTTCAACCAAAGGCGAATCCCTCCATTTTTATCAATTCTATAATTATCCTTCAACCATGGAAAACCGCCGATCCCTTTCTCAACCTCTCATCTCCTCAACCTCCCCCGCCCCCACCACCACTCCCACTTCTCCTCACCTCTCCAATCACGCCATCGCCCTCCGCCTCCTTCTCGTCGCCGTCGTCGGCCTCACTTCACTATGGGCCAATCACGAAGCCTCAAAAGGCTTCGACATAACAATTCTCAACAACGCCAAAGGCTCCTCCGCCGGTCAACGTTTCGATCTCTTCTACGTTTCAAATGACGAAGCCACGCGCCTACTCCTCAACGCCAGTAACTTCATTCAGAATCTGATCTACCCTTCACATCACCTCCCAAAGAAGATAATCAAAAGCGTGCATCTCACGCTCTCCCTCCGTGATCTCCCTTCTAATGTCGCCGTTGAGCAGCTCGACGGTGGTGTTGACTTCGCCGTCCATTTGAGCCCTTCTATTTTCAATGGCACAAACATGAATCACGCCATGTCAACGGCGGTTCTCAGAGGTATGTCACGCGTGTGGTTATGGAATGGAGAGGGCCACGCGCCGCCGTCCCTCCTCGACGGAATGGTGGAGCATATCGTCGCGACAGCCGGATTTGTCGAGAAGAAATATCCCGGTGGGGCCGTTAGCACGCTGGCGGCATGTGAGGCCATGTGGTGGAAGGATAAGGACCCTATGGAGATCGCAATGTTCCTCGATTATCATGAAAGACAGGGGGAGGGTTTCATCCAACGGTTGAACCTAGCTTTGAGGTCCAGATGGCACGATCGGACCGTTGATGATGTGTTGGCTATGCCAGATCAGCGCCCATGTGGTTCTTTCAACTCATCCGCAATCCTATAGGGCAATGGGTCAAATATTCCAATCCACGTCGGATGGGGTTGTCTTTGCAAAGAACCTCTTCTACTTTATTGTTTCTTTTTGTTTTTCAGCCATTTCGTCCTACAATTTTTTGAATTTGTTTAATATATTTTTGTAACATCCGAATTGCACAACTTTGTGTTATAAATACTCTTTAAATGTTGTTGCTCTGTTAAATACTTCTTGTTTCCTTCATTCTGTATTTACAAAAATTTATGAAAATCTTTTTTGATT ATGGAAAACCGCCGATCCCTTTCTCAACCTCTCATCTCCTCAACCTCCCCCGCCCCCACCACCACTCCCACTTCTCCTCACCTCTCCAATCACGCCATCGCCCTCCGCCTCCTTCTCGTCGCCGTCGTCGGCCTCACTTCACTATGGGCCAATCACGAAGCCTCAAAAGGCTTCGACATAACAATTCTCAACAACGCCAAAGGCTCCTCCGCCGGTCAACGTTTCGATCTCTTCTACGTTTCAAATGACGAAGCCACGCGCCTACTCCTCAACGCCAGTAACTTCATTCAGAATCTGATCTACCCTTCACATCACCTCCCAAAGAAGATAATCAAAAGCGTGCATCTCACGCTCTCCCTCCGTGATCTCCCTTCTAATGTCGCCGTTGAGCAGCTCGACGGTGGTGTTGACTTCGCCGTCCATTTGAGCCCTTCTATTTTCAATGGCACAAACATGAATCACGCCATGTCAACGGCGGTTCTCAGAGGTATGTCACGCGTGTGGTTATGGAATGGAGAGGGCCACGCGCCGCCGTCCCTCCTCGACGGAATGGTGGAGCATATCGTCGCGACAGCCGGATTTGTCGAGAAGAAATATCCCGGTGGGGCCGTTAGCACGCTGGCGGCATGTGAGGCCATGTGGTGGAAGGATAAGGACCCTATGGAGATCGCAATGTTCCTCGATTATCATGAAAGACAGGGGGAGGGTTTCATCCAACGGTTGAACCTAGCTTTGAGGTCCAGATGGCACGATCGGACCGTTGATGATGTGTTGGCTATGCCAGATCAGCGCCCATGTGGTTCTTTCAACTCATCCGCAATCCTATAG ATGGAAAACCGCCGATCCCTTTCTCAACCTCTCATCTCCTCAACCTCCCCCGCCCCCACCACCACTCCCACTTCTCCTCACCTCTCCAATCACGCCATCGCCCTCCGCCTCCTTCTCGTCGCCGTCGTCGGCCTCACTTCACTATGGGCCAATCACGAAGCCTCAAAAGGCTTCGACATAACAATTCTCAACAACGCCAAAGGCTCCTCCGCCGGTCAACGTTTCGATCTCTTCTACGTTTCAAATGACGAAGCCACGCGCCTACTCCTCAACGCCAGTAACTTCATTCAGAATCTGATCTACCCTTCACATCACCTCCCAAAGAAGATAATCAAAAGCGTGCATCTCACGCTCTCCCTCCGTGATCTCCCTTCTAATGTCGCCGTTGAGCAGCTCGACGGTGGTGTTGACTTCGCCGTCCATTTGAGCCCTTCTATTTTCAATGGCACAAACATGAATCACGCCATGTCAACGGCGGTTCTCAGAGGTATGTCACGCGTGTGGTTATGGAATGGAGAGGGCCACGCGCCGCCGTCCCTCCTCGACGGAATGGTGGAGCATATCGTCGCGACAGCCGGATTTGTCGAGAAGAAATATCCCGGTGGGGCCGTTAGCACGCTGGCGGCATGTGAGGCCATGTGGTGGAAGGATAAGGACCCTATGGAGATCGCAATGTTCCTCGATTATCATGAAAGACAGGGGGAGGGTTTCATCCAACGGTTGAACCTAGCTTTGAGGTCCAGATGGCACGATCGGACCGTTGATGATGTGTTGGCTATGCCAGATCAGCGCCCATGTGGTTCTTTCAACTCATCCGCAATCCTATAG MENRRSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDITILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHLPKKIIKSVHLTLSLRDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPPSLLDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFIQRLNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAIL*
BLAST of Csa6G423460 vs. TrEMBL
Match: A0A0A0KGU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423460 PE=4 SV=1) HSP 1 Score: 557.4 bits (1435), Expect = 9.9e-156 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1
BLAST of Csa6G423460 vs. TrEMBL
Match: M5WXP0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024311mg PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 9.9e-63 Identity = 137/283 (48.41%), Postives = 184/283 (65.02%), Query Frame = 1
BLAST of Csa6G423460 vs. TrEMBL
Match: F6H5C9_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VIT_12s0028g00040 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 4.4e-55 Identity = 120/276 (43.48%), Postives = 177/276 (64.13%), Query Frame = 1
BLAST of Csa6G423460 vs. TrEMBL
Match: V4VDE9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033364mg PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 7.1e-53 Identity = 119/250 (47.60%), Postives = 163/250 (65.20%), Query Frame = 1
BLAST of Csa6G423460 vs. TrEMBL
Match: B9H816_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22400g PE=4 SV=2) HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51 Identity = 124/291 (42.61%), Postives = 183/291 (62.89%), Query Frame = 1
BLAST of Csa6G423460 vs. TAIR10
Match: AT2G42900.1 (AT2G42900.1 Plant basic secretory protein (BSP) family protein) HSP 1 Score: 160.6 bits (405), Expect = 1.4e-39 Identity = 102/272 (37.50%), Postives = 149/272 (54.78%), Query Frame = 1
BLAST of Csa6G423460 vs. NCBI nr
Match: gi|778716617|ref|XP_004140255.2| (PREDICTED: uncharacterized protein LOC101221763 [Cucumis sativus]) HSP 1 Score: 557.4 bits (1435), Expect = 1.4e-155 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1
BLAST of Csa6G423460 vs. NCBI nr
Match: gi|659097291|ref|XP_008449544.1| (PREDICTED: uncharacterized protein LOC103491397 [Cucumis melo]) HSP 1 Score: 498.8 bits (1283), Expect = 6.0e-138 Identity = 249/276 (90.22%), Postives = 257/276 (93.12%), Query Frame = 1
BLAST of Csa6G423460 vs. NCBI nr
Match: gi|595958807|ref|XP_007216777.1| (hypothetical protein PRUPE_ppa024311mg [Prunus persica]) HSP 1 Score: 248.4 bits (633), Expect = 1.4e-62 Identity = 137/283 (48.41%), Postives = 184/283 (65.02%), Query Frame = 1
BLAST of Csa6G423460 vs. NCBI nr
Match: gi|645246662|ref|XP_008229459.1| (PREDICTED: uncharacterized protein LOC103328833 [Prunus mume]) HSP 1 Score: 239.6 bits (610), Expect = 6.6e-60 Identity = 135/287 (47.04%), Postives = 182/287 (63.41%), Query Frame = 1
BLAST of Csa6G423460 vs. NCBI nr
Match: gi|764611274|ref|XP_004305831.2| (PREDICTED: uncharacterized protein LOC101314400 [Fragaria vesca subsp. vesca]) HSP 1 Score: 230.3 bits (586), Expect = 4.0e-57 Identity = 127/278 (45.68%), Postives = 181/278 (65.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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