Csa6G423460.1 (mRNA) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa6G423460.1
Type	mRNA
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	NtPRp27; contains IPR007541 (Uncharacterised protein family, basic secretory protein)
Location	Chr6 : 19698415 .. 19699592 (-)
Sequence length	828

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGGCACCAAATCATAGCATCTTCAATTGAAGTCATAAACGTTCAACCAAAGGCGAATCCCTCCATTTTTATCAATTCTATAATTATCCTTCAACCATGGAAAACCGCCGATCCCTTTCTCAACCTCTCATCTCCTCAACCTCCCCCGCCCCCACCACCACTCCCACTTCTCCTCACCTCTCCAATCACGCCATCGCCCTCCGCCTCCTTCTCGTCGCCGTCGTCGGCCTCACTTCACTATGGGCCAATCACGAAGCCTCAAAAGGCTTCGACATAACAATTCTCAACAACGCCAAAGGCTCCTCCGCCGGTCAACGTTTCGATCTCTTCTACGTTTCAAATGACGAAGCCACGCGCCTACTCCTCAACGCCAGTAACTTCATTCAGAATCTGATCTACCCTTCACATCACCTCCCAAAGAAGATAATCAAAAGCGTGCATCTCACGCTCTCCCTCCGTGATCTCCCTTCTAATGTCGCCGTTGAGCAGCTCGACGGTGGTGTTGACTTCGCCGTCCATTTGAGCCCTTCTATTTTCAATGGCACAAACATGAATCACGCCATGTCAACGGCGGTTCTCAGAGGTATGTCACGCGTGTGGTTATGGAATGGAGAGGGCCACGCGCCGCCGTCCCTCCTCGACGGAATGGTGGAGCATATCGTCGCGACAGCCGGATTTGTCGAGAAGAAATATCCCGGTGGGGCCGTTAGCACGCTGGCGGCATGTGAGGCCATGTGGTGGAAGGATAAGGACCCTATGGAGATCGCAATGTTCCTCGATTATCATGAAAGACAGGGGGAGGGTTTCATCCAACGGTTGAACCTAGCTTTGAGGTCCAGATGGCACGATCGGACCGTTGATGATGTGTTGGCTATGCCAGATCAGCGCCCATGTGGTTCTTTCAACTCATCCGCAATCCTATAGGGCAATGGGTCAAATATTCCAATCCACGTCGGATGGGGTTGTCTTTGCAAAGAACCTCTTCTACTTTATTGTTTCTTTTTGTTTTTCAGCCATTTCGTCCTACAATTTTTTGAATTTGTTTAATATATTTTTGTAACATCCGAATTGCACAACTTTGTGTTATAAATACTCTTTAAATGTTGTTGCTCTGTTAAATACTTCTTGTTTCCTTCATTCTGTATTTACAAAAATTTATGAAAATCTTTTTTGATT

mRNA sequence

ATGGAAAACCGCCGATCCCTTTCTCAACCTCTCATCTCCTCAACCTCCCCCGCCCCCACCACCACTCCCACTTCTCCTCACCTCTCCAATCACGCCATCGCCCTCCGCCTCCTTCTCGTCGCCGTCGTCGGCCTCACTTCACTATGGGCCAATCACGAAGCCTCAAAAGGCTTCGACATAACAATTCTCAACAACGCCAAAGGCTCCTCCGCCGGTCAACGTTTCGATCTCTTCTACGTTTCAAATGACGAAGCCACGCGCCTACTCCTCAACGCCAGTAACTTCATTCAGAATCTGATCTACCCTTCACATCACCTCCCAAAGAAGATAATCAAAAGCGTGCATCTCACGCTCTCCCTCCGTGATCTCCCTTCTAATGTCGCCGTTGAGCAGCTCGACGGTGGTGTTGACTTCGCCGTCCATTTGAGCCCTTCTATTTTCAATGGCACAAACATGAATCACGCCATGTCAACGGCGGTTCTCAGAGGTATGTCACGCGTGTGGTTATGGAATGGAGAGGGCCACGCGCCGCCGTCCCTCCTCGACGGAATGGTGGAGCATATCGTCGCGACAGCCGGATTTGTCGAGAAGAAATATCCCGGTGGGGCCGTTAGCACGCTGGCGGCATGTGAGGCCATGTGGTGGAAGGATAAGGACCCTATGGAGATCGCAATGTTCCTCGATTATCATGAAAGACAGGGGGAGGGTTTCATCCAACGGTTGAACCTAGCTTTGAGGTCCAGATGGCACGATCGGACCGTTGATGATGTGTTGGCTATGCCAGATCAGCGCCCATGTGGTTCTTTCAACTCATCCGCAATCCTATAG

Coding sequence (CDS)

ATGGAAAACCGCCGATCCCTTTCTCAACCTCTCATCTCCTCAACCTCCCCCGCCCCCACCACCACTCCCACTTCTCCTCACCTCTCCAATCACGCCATCGCCCTCCGCCTCCTTCTCGTCGCCGTCGTCGGCCTCACTTCACTATGGGCCAATCACGAAGCCTCAAAAGGCTTCGACATAACAATTCTCAACAACGCCAAAGGCTCCTCCGCCGGTCAACGTTTCGATCTCTTCTACGTTTCAAATGACGAAGCCACGCGCCTACTCCTCAACGCCAGTAACTTCATTCAGAATCTGATCTACCCTTCACATCACCTCCCAAAGAAGATAATCAAAAGCGTGCATCTCACGCTCTCCCTCCGTGATCTCCCTTCTAATGTCGCCGTTGAGCAGCTCGACGGTGGTGTTGACTTCGCCGTCCATTTGAGCCCTTCTATTTTCAATGGCACAAACATGAATCACGCCATGTCAACGGCGGTTCTCAGAGGTATGTCACGCGTGTGGTTATGGAATGGAGAGGGCCACGCGCCGCCGTCCCTCCTCGACGGAATGGTGGAGCATATCGTCGCGACAGCCGGATTTGTCGAGAAGAAATATCCCGGTGGGGCCGTTAGCACGCTGGCGGCATGTGAGGCCATGTGGTGGAAGGATAAGGACCCTATGGAGATCGCAATGTTCCTCGATTATCATGAAAGACAGGGGGAGGGTTTCATCCAACGGTTGAACCTAGCTTTGAGGTCCAGATGGCACGATCGGACCGTTGATGATGTGTTGGCTATGCCAGATCAGCGCCCATGTGGTTCTTTCAACTCATCCGCAATCCTATAG

Protein sequence

MENRRSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDITILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHLPKKIIKSVHLTLSLRDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPPSLLDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFIQRLNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAIL*

Homology

[Close]

BLAST of Csa6G423460.1 vs. TrEMBL
Match: A0A0A0KGU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423460 PE=4 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 9.9e-156
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1


Query: 1   MENRRSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDI 60
           MENRRSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDI
Sbjct: 1   MENRRSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDI 60

Query: 61  TILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHLPKKIIKSVHLTLSL 120
           TILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHLPKKIIKSVHLTLSL
Sbjct: 61  TILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHLPKKIIKSVHLTLSL 120

Query: 121 RDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPPSL 180
           RDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPPSL
Sbjct: 121 RDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPPSL 180

Query: 181 LDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFIQR 240
           LDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFIQR
Sbjct: 181 LDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFIQR 240

Query: 241 LNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAIL 276
           LNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAIL
Sbjct: 241 LNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAIL 275

[Close]

BLAST of Csa6G423460.1 vs. TrEMBL
Match: M5WXP0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024311mg PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.9e-63
Identity = 137/283 (48.41%), Postives = 184/283 (65.02%), Query Frame = 1


Query: 1   MENRRSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDI 60
           M +++SL QPLI      P +T  + H     I +R LLV  +GL +L+A+ EASKGFDI
Sbjct: 1   MHDQQSLFQPLIHGKPTIPPST--NNHSGAINILVRFLLVFFIGLLALYADREASKGFDI 60

Query: 61  TILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHL-PKKIIKSVHLTLS 120
           TI+N+ K S+AG  F LFYVSND+ATR++L+ SNF+++L+YP  H  PKK I  V L LS
Sbjct: 61  TIINDIKDSAAGWCFHLFYVSNDKATRIILHTSNFVEHLLYPEAHAQPKKHINHVVLRLS 120

Query: 121 LRDLPSN---VAVEQLDGGVD--FAVHLSPSIFN---GTNMNHAMSTAVLRGMSRVWLWN 180
            R+L S+   V V       +  F + +SPSI +     + + A+ TA+LRGM+ VWLW+
Sbjct: 121 GRNLTSHNIGVVVHHSPNKENDHFVLDISPSIMDDQPNAHRHRALVTAILRGMAHVWLWD 180

Query: 181 GEGHAPPSLLDGMVEH--IVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDY 240
           GE HAPP L+DGMVE+  +VA  G  ++    G  + L  C+  WWKDKDP  +A  L+Y
Sbjct: 181 GEAHAPPELIDGMVEYTRMVAEQGLFDETKSYGVSTKLPGCDKFWWKDKDPRVVAQMLNY 240

Query: 241 HERQGEGFIQRLNLALRSRWHDRTVDDVLAMPDQRPCGSFNSS 273
           +E   +GFIQRLN A+R +WHDRTVDD L MP Q  CG+FN S
Sbjct: 241 YEGHSKGFIQRLNGAMREKWHDRTVDDALGMPLQNLCGTFNFS 281

[Close]

BLAST of Csa6G423460.1 vs. TrEMBL
Match: F6H5C9_VITVI (Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VIT_12s0028g00040 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.4e-55
Identity = 120/276 (43.48%), Postives = 177/276 (64.13%), Query Frame = 1


Query: 6   SLSQPLI------SSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFD 65
           +L QPL+      SS + A      +   SN  I  R+L V  +G+ ++WAN EASKGF 
Sbjct: 5   NLLQPLLQPPATTSSANTAAKDDAINLISSNSGILFRVLSVFFIGIVTIWANCEASKGFS 64

Query: 66  ITILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIY-PSHHLPKKIIKSVHLTL 125
           ITI+N+A  ++AG++FDLFYVSND+ATR++LN S F++ ++Y PS+  PKK +  V + L
Sbjct: 65  ITIINDAGDTAAGRKFDLFYVSNDKATRMVLNTSEFVEKVLYDPSNTHPKKDVNHVIVRL 124

Query: 126 SLRDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPP 185
           + R+L   V V   +   +FA+ +SPS+  GT++ +AM++A+ RGM+R+WLW+GE  APP
Sbjct: 125 ASRNLTHMVIVSSRERN-EFALDISPSVMQGTHVGYAMASALQRGMARIWLWDGEDSAPP 184

Query: 186 SLLDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFI 245
           +LL+GMVE+I   AGF        +V  L+      W +KDP+ +A FL+Y E Q  GFI
Sbjct: 185 ALLEGMVEYITILAGFSPAPTMPNSVD-LSGSGNFCWMNKDPIAVAHFLNYCEAQNRGFI 244

Query: 246 QRLNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAI 275
           QRLN A+  +WH+  ++  L  P Q  C S+NS+ I
Sbjct: 245 QRLNQAMEHQWHEGALEAALGFPVQDLCASYNSTKI 278

[Close]

BLAST of Csa6G423460.1 vs. TrEMBL
Match: V4VDE9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033364mg PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.1e-53
Identity = 119/250 (47.60%), Postives = 163/250 (65.20%), Query Frame = 1


Query: 29  SNHAIALRLLLVAVVGLTSLWANHEASKGFDITILNNAKGSSAGQRFDLFYVSNDEATRL 88
           SN +I  RLL V V+G+ S+WANHEASKGFDITI+N AK S AG+RF+LFY+SND+ATR+
Sbjct: 45  SNTSITFRLLAVIVLGVISIWANHEASKGFDITIINEAKDSPAGRRFELFYISNDKATRI 104

Query: 89  LLNASNFIQNLIYPSHHLPKKIIKSV-HLTLSLRDLPSN---VAVEQL-DGGVDFAVHLS 148
           LLN S+F +N++YP+ +      K V H+TL L    +    VAV+   +   DF + LS
Sbjct: 105 LLNTSSFAENILYPNTNFSLDSKKQVQHVTLRLTTNTTQRILVAVDTTNESNDDFVISLS 164

Query: 149 PSIFNGTNM---NHAMSTAVLRGMSRVWLWNGEGHAPPSLLDGMVEHIVATAGFVE-KKY 208
            S+ + TN+   NHA+ +A+ RGM+R+WLW+G+  APPSL+ G+VE+I   AGF + K Y
Sbjct: 165 SSVMSDTNIANANHAIVSALQRGMARIWLWDGQSRAPPSLIQGLVEYISMLAGFGDAKNY 224

Query: 209 PGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFIQRLNLALRSRWHDRTVDDVLA 268
            GG +        + W  KD    A FL++ E   +GFIQRLN  +R RW +RTVDD L 
Sbjct: 225 VGGELPEFG---HICWDSKDAGVTARFLEFCEVNHKGFIQRLNQGMRQRWDNRTVDDALG 284

Query: 269 MPDQRPCGSF 270
           M  +  C S+
Sbjct: 285 MEAKYLCDSY 291

[Close]

BLAST of Csa6G423460.1 vs. TrEMBL
Match: B9H816_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22400g PE=4 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 1.3e-51
Identity = 124/291 (42.61%), Postives = 183/291 (62.89%), Query Frame = 1


Query: 6   SLSQPL-----ISSTSPAPTTTPTSPHL-------------SNHAIALRLLLVAVVGLTS 65
           SL QP+     I++ S + TTT TS +              SN +I LRLLL+  +G+ S
Sbjct: 5   SLIQPILIPRDIATASSSTTTTTTSFYYFDDTDADYIKHWSSNSSIILRLLLITSIGIIS 64

Query: 66  LWANHEASKGFDITILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPS-HHL 125
           +WAN+EASKGF IT++N+AK S+ G+RF L Y+SND+ATR++LN S F++NL+YP+ +  
Sbjct: 65  IWANYEASKGFGITLVNDAKDSAEGKRFTLSYISNDKATRIILNTSLFVENLLYPNINDT 124

Query: 126 PKKIIKSVHLTLSLRDLPSNVAVEQLDGGVDFAVHLSPSIFNG--TNMNHAMSTAVLRGM 185
            K++I  V L L+  +LP+ V V+  +   +F +++SPS+  G   N+++A+++ VL+GM
Sbjct: 125 KKQVIHHVTLRLASNNLPNLVTVD-TNTNNEFVINISPSVLMGHPKNLDYAITSVVLQGM 184

Query: 186 SRVWLWNGEGHAPPSLLDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIA 245
           +R W+W+ E  AP  LLDGMVE+I   AGF   +  GG  S           DKDPM +A
Sbjct: 185 ARAWIWDSESRAPQWLLDGMVEYINGLAGFGPVRNLGGHESLDDQFGKFCSGDKDPMVVA 244

Query: 246 MFLDYHERQGEGFIQRLNLALRS--RWHDRTVDDVLAMPDQRPCGSFNSSA 274
            FL   ER  +GFIQRLN ALR   +W  RTV+DVL + +Q  C  + +++
Sbjct: 245 QFLKNCERHEKGFIQRLNKALRDDHQWIGRTVEDVLGISEQNLCDLYKNTS 294

[Close]

BLAST of Csa6G423460.1 vs. TAIR10
Match: AT2G42900.1 (AT2G42900.1 Plant basic secretory protein (BSP) family protein)

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-39
Identity = 102/272 (37.50%), Postives = 149/272 (54.78%), Query Frame = 1


Query: 5   RSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDITILN 64
           ++L QP ++     PTT   +   S+  I LRL  + +VG  SLWANHEASKGF I+I+N
Sbjct: 7   QTLLQPFLAK----PTTKGLATE-SDSGIILRLFSILLVGAISLWANHEASKGFSISIIN 66

Query: 65  NAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHLPKKIIKSV-HLTLSL--- 124
           +AK S +G+RF LF+ S+D A R+LL+AS F++  +Y    +P ++ K V H+T+     
Sbjct: 67  DAKDSPSGKRFALFFESDDTAVRILLDASFFVERFLYEG--VPHRLRKPVNHVTVQFCGN 126

Query: 125 -RDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPPS 184
             D     +V       ++ + LSPS+      ++A+ +A+ R M R+WLW  E  A P 
Sbjct: 127 SSDRVDRFSVTSGASHGEYVIRLSPSLTERKKFSNAVESALRRSMVRIWLWGDESGASPE 186

Query: 185 LLDGMVEHIVATAGFVE--KKYPGGAVSTLAACEAMWWKDKD-PMEIAMFLDYHERQGEG 244
           L+ GMVE++   +      +K+ G             WKDK+  + +   LDY ER+ EG
Sbjct: 187 LVAGMVEYLAVESRKRRHFEKFGGN------------WKDKEKSVYVVSLLDYCERRSEG 246

Query: 245 FIQRLNLALRSRWHDRTVDDVLAMPDQRPCGS 269
           FI+RLN  +R RW DRTVD    +     CGS
Sbjct: 247 FIRRLNHGMRLRWDDRTVD----LASSGACGS 255

[Close]

BLAST of Csa6G423460.1 vs. NCBI nr
Match: gi|778716617|ref|XP_004140255.2| (PREDICTED: uncharacterized protein LOC101221763 [Cucumis sativus])

HSP 1 Score: 557.4 bits (1435), Expect = 1.4e-155
Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 1


Query: 1   MENRRSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDI 60
           MENRRSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDI
Sbjct: 1   MENRRSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDI 60

Query: 61  TILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHLPKKIIKSVHLTLSL 120
           TILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHLPKKIIKSVHLTLSL
Sbjct: 61  TILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHLPKKIIKSVHLTLSL 120

Query: 121 RDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPPSL 180
           RDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPPSL
Sbjct: 121 RDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPPSL 180

Query: 181 LDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFIQR 240
           LDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFIQR
Sbjct: 181 LDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFIQR 240

Query: 241 LNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAIL 276
           LNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAIL
Sbjct: 241 LNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAIL 275

[Close]

BLAST of Csa6G423460.1 vs. NCBI nr
Match: gi|659097291|ref|XP_008449544.1| (PREDICTED: uncharacterized protein LOC103491397 [Cucumis melo])

HSP 1 Score: 498.8 bits (1283), Expect = 6.0e-138
Identity = 249/276 (90.22%), Postives = 257/276 (93.12%), Query Frame = 1


Query: 1   MENRRSLSQPLISSTSP-APTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFD 60
           MENRRSLSQPL+SSTS  A  TTPTSP+LSNHA+ LRLLLVAVVGLTSLWANHEASKGFD
Sbjct: 1   MENRRSLSQPLLSSTSTSAAPTTPTSPNLSNHAVLLRLLLVAVVGLTSLWANHEASKGFD 60

Query: 61  ITILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHLPKKIIKSVHLTLS 120
           ITILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPS  LPKKIIKSVHLTLS
Sbjct: 61  ITILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSQDLPKKIIKSVHLTLS 120

Query: 121 LRDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGHAPPS 180
           LRDL SNVAVEQLDGGVDFAVHLSPSIFN TNMNHAMSTA+LRGMSRVWLWNGEGHAPPS
Sbjct: 121 LRDLSSNVAVEQLDGGVDFAVHLSPSIFNDTNMNHAMSTAILRGMSRVWLWNGEGHAPPS 180

Query: 181 LLDGMVEHIVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEGFIQ 240
           LLDGMVEHIVA AGFVE+KY GGAV TLAACE MWWKDKDPMEIA FLDYHERQGEGFIQ
Sbjct: 181 LLDGMVEHIVAAAGFVERKYSGGAVGTLAACEPMWWKDKDPMEIATFLDYHERQGEGFIQ 240

Query: 241 RLNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAIL 276
           RLN ALRSRW DRTVD+VL +PDQRPCGSFN+S  L
Sbjct: 241 RLNQALRSRWQDRTVDNVLGLPDQRPCGSFNTSGSL 276

[Close]

BLAST of Csa6G423460.1 vs. NCBI nr
Match: gi|595958807|ref|XP_007216777.1| (hypothetical protein PRUPE_ppa024311mg [Prunus persica])

HSP 1 Score: 248.4 bits (633), Expect = 1.4e-62
Identity = 137/283 (48.41%), Postives = 184/283 (65.02%), Query Frame = 1


Query: 1   MENRRSLSQPLISSTSPAPTTTPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGFDI 60
           M +++SL QPLI      P +T  + H     I +R LLV  +GL +L+A+ EASKGFDI
Sbjct: 1   MHDQQSLFQPLIHGKPTIPPST--NNHSGAINILVRFLLVFFIGLLALYADREASKGFDI 60

Query: 61  TILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHHL-PKKIIKSVHLTLS 120
           TI+N+ K S+AG  F LFYVSND+ATR++L+ SNF+++L+YP  H  PKK I  V L LS
Sbjct: 61  TIINDIKDSAAGWCFHLFYVSNDKATRIILHTSNFVEHLLYPEAHAQPKKHINHVVLRLS 120

Query: 121 LRDLPSN---VAVEQLDGGVD--FAVHLSPSIFN---GTNMNHAMSTAVLRGMSRVWLWN 180
            R+L S+   V V       +  F + +SPSI +     + + A+ TA+LRGM+ VWLW+
Sbjct: 121 GRNLTSHNIGVVVHHSPNKENDHFVLDISPSIMDDQPNAHRHRALVTAILRGMAHVWLWD 180

Query: 181 GEGHAPPSLLDGMVEH--IVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDY 240
           GE HAPP L+DGMVE+  +VA  G  ++    G  + L  C+  WWKDKDP  +A  L+Y
Sbjct: 181 GEAHAPPELIDGMVEYTRMVAEQGLFDETKSYGVSTKLPGCDKFWWKDKDPRVVAQMLNY 240

Query: 241 HERQGEGFIQRLNLALRSRWHDRTVDDVLAMPDQRPCGSFNSS 273
           +E   +GFIQRLN A+R +WHDRTVDD L MP Q  CG+FN S
Sbjct: 241 YEGHSKGFIQRLNGAMREKWHDRTVDDALGMPLQNLCGTFNFS 281

[Close]

BLAST of Csa6G423460.1 vs. NCBI nr
Match: gi|645246662|ref|XP_008229459.1| (PREDICTED: uncharacterized protein LOC103328833 [Prunus mume])

HSP 1 Score: 239.6 bits (610), Expect = 6.6e-60
Identity = 135/287 (47.04%), Postives = 182/287 (63.41%), Query Frame = 1


Query: 1   MENRRSLSQPLISSTSPAPTTTPTSPHLSNHA--------IALRLLLVAVVGLTSLWANH 60
           M+++ SL QPLI      P +T  + H  +HA        I +R L V  +GL +L+A+ 
Sbjct: 1   MDDQPSLFQPLIHGKPTIPPST--NNHCVHHASHNSGTIDILVRFLSVFFIGLLALYADR 60

Query: 61  EASKGFDITILNNAKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYP-SHHLPKKII 120
           EASKGFDITI+N+ K S AG+RF LFYVSND+ATR++L+ SNF++ L+YP +H  PKK I
Sbjct: 61  EASKGFDITIINDIKHSVAGRRFHLFYVSNDKATRIILDTSNFVECLLYPEAHAQPKKHI 120

Query: 121 KSVHLTLSLRDLPSN---VAVEQLDGGVD--FAVHLSPSIFNG-TNMNHAMSTAVLRGMS 180
             V L LS  +L S+   V V       +  F   +SPSI +   N + A+ TA+LRGM+
Sbjct: 121 NHVILRLSSLNLTSHNTGVVVHHSPNKKNDHFVFDISPSIMDDQPNAHRALVTAILRGMA 180

Query: 181 RVWLWNGEGHAPPSLLDGMVEH--IVATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEI 240
            VWLW+GE HAPP L+DGMVE+  +V   G  ++    G  + L  C+  WWKDKDP  +
Sbjct: 181 HVWLWDGEAHAPPELIDGMVEYTRMVGEQGLFDETKSYGMGTKLPGCDKFWWKDKDPRVV 240

Query: 241 AMFLDYHERQGEGFIQRLNLALRSRWHDRTVDDVLAMPDQRPCGSFN 271
           A  L+Y+E   +GFIQRLN A+R +WHDR VDD L MP Q  CG++N
Sbjct: 241 AQMLNYYEGHSKGFIQRLNGAMREKWHDRMVDDALGMPLQNLCGTYN 285

[Close]

BLAST of Csa6G423460.1 vs. NCBI nr
Match: gi|764611274|ref|XP_004305831.2| (PREDICTED: uncharacterized protein LOC101314400 [Fragaria vesca subsp. vesca])

HSP 1 Score: 230.3 bits (586), Expect = 4.0e-57
Identity = 127/278 (45.68%), Postives = 181/278 (65.11%), Query Frame = 1


Query: 1   MENRRSLSQPLISSTSPAPTT--TPTSPHLSNHAIALRLLLVAVVGLTSLWANHEASKGF 60
           +E+ +S+ QPLI    P  T   T +    SN  I +R + V +VG+ S WANHEASKGF
Sbjct: 47  IEDHQSIFQPLIDR-KPIKTNHDTTSDDSTSNVGILIRFISVILVGILSFWANHEASKGF 106

Query: 61  DITILNN-AKGSSAGQRFDLFYVSNDEATRLLLNASNFIQNLIYPSHH-LPKKIIKSVHL 120
           DIT+LNN A+ S AGQRF LFYV+ND+ TR++L+AS+FI++L+YPS   +PKK + SV +
Sbjct: 107 DITVLNNVARDSLAGQRFHLFYVANDKVTRIVLHASDFIEHLLYPSDDDIPKKQVNSVVV 166

Query: 121 TLSLRDLPSNVAVEQLDGGVDFAVHLSPSIFNGTNMNHAMSTAVLRGMSRVWLWNGEGH- 180
            L    +  N+    ++   +F V++SPS+    N++ A+ +A+ RGM+RVWLW+G G  
Sbjct: 167 RL----VSVNLTKAVVENDRNFVVNISPSVMEEANVDRALVSAIRRGMARVWLWDGRGSG 226

Query: 181 APPSLLDGMVEHI-VATAGFVEKKYPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQG 240
           APP L++GMVE++ +A  GF   K      +  A     WW+DKDP+ +A  L Y+E   
Sbjct: 227 APPELVEGMVEYVRMAAEGFGGLKSDFSVRNIPAGEGYAWWEDKDPVALATLLRYYEGYS 286

Query: 241 EGFIQRLNLALRSRWHDRTVDDVLAMPDQRPCGSFNSS 273
           +GFIQRLN A++ +WHD TV+D L MP Q  CG +N S
Sbjct: 287 KGFIQRLNRAMKYKWHDGTVNDALGMPLQNICGEYNFS 319

The following BLAST results are available for this feature:

BLAST of Csa6G423460.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGU9_CUCSA	9.9e-156	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423460 PE=4 SV=1	[more]
M5WXP0_PRUPE	9.9e-63	48.41	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024311mg PE=4 SV=1	[more]
F6H5C9_VITVI	4.4e-55	43.48	Putative uncharacterized protein (Fragment) OS=Vitis vinifera GN=VIT_12s0028g000...	[more]
V4VDE9_9ROSI	7.1e-53	47.60	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033364mg PE=4 SV=1	[more]
B9H816_POPTR	1.3e-51	42.61	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s22400g PE=4 SV=2	[more]

BLAST of Csa6G423460.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42900.1	1.4e-39	37.50	Plant basic secretory protein (BSP) family protein	[more]

BLAST of Csa6G423460.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778716617\|ref\|XP_004140255.2\|	1.4e-155	100.00	PREDICTED: uncharacterized protein LOC101221763 [Cucumis sativus]	[more]
gi\|659097291\|ref\|XP_008449544.1\|	6.0e-138	90.22	PREDICTED: uncharacterized protein LOC103491397 [Cucumis melo]	[more]
gi\|595958807\|ref\|XP_007216777.1\|	1.4e-62	48.41	hypothetical protein PRUPE_ppa024311mg [Prunus persica]	[more]
gi\|645246662\|ref\|XP_008229459.1\|	6.6e-60	47.04	PREDICTED: uncharacterized protein LOC103328833 [Prunus mume]	[more]
gi\|764611274\|ref\|XP_004305831.2\|	4.0e-57	45.68	PREDICTED: uncharacterized protein LOC101314400 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR007541	Uncharacterised_BSP

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Csa6G423460	Csa6G423460	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Csa6G423460.1	Csa6G423460.1-protein	polypeptide

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G423460.1.utr3p1	Csa6G423460.1.utr3p1	three_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G423460.1.cds1	Csa6G423460.1.cds1	CDS

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Csa6G423460.1.utr5p1	Csa6G423460.1.utr5p1	five_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007541	Uncharacterised protein family, basic secretory protein	PFAM	PF04450	BSP	coord: 58..259 score: 6.2
None	No IPR available	PANTHER	PTHR33321	FAMILY NOT NAMED	coord: 6..273 score: 4.7
None	No IPR available	PANTHER	PTHR33321:SF3	SUBFAMILY NOT NAMED	coord: 6..273 score: 4.7