CU106770 (transcribed_cluster) Cucumber (Chinese Long) v2

NameCU106770
Typetranscribed_cluster
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 19698415 .. 19698932 (+)
Sequence length527
The following sequences are available for this feature:

transcribed_cluster sequence

GGTAATCAAAAAAGATTTTCATAAATTTTTGTAAATACAGAATGAAGGAAACAAGAAGTATTTAACAGAGCATCAACATTTAAAGAGTATTTATAACACAAAGTTGTGCAATTCGGATGTTACAAAAATATATTAAACAAATTCAAAAAATTGTAGGACGAAATGGCTGAAAAAACAAAAAAGAAAACAATAAAGTAGAAGAGGTTCTTTGCAAAGACAACCCCATCCGACGTGGATTGGAATATTTGACCCATTGCCCTATAGGATTGCGGATGAGTTGAACGAACCACATGGGCGCTGATCTGGCATAGCCAACACATCATCAACGGTCTGATCGTGCCATCTGGACCTCAAAGCTTGGTTCAACCGTTGGATGTAAACCCTCCCCCTGTATTTCATGATAATCGAGGAACATTGCGATCTCCATAGGGTCCTTATCCTTCCACCACATGGCCTCACATGCCGCCAGCGTGCTAACGGTCCCCACCGGGATATTTCTTCTCGACAAAATACCGGCTGTCGCGACG
BLAST of CU106770 vs. TrEMBL
Match: A0A0A0KGU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423460 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 5.9e-13
Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = -2

Query: 380 VATAGILSRRNIPVGTVSTLAACEAMWWKDKDPMEIAMFLDYHEIQGEG 439
           VATAG + ++  P G VSTLAACEAMWWKDKDPMEIAMFLDYHE QGEG
Sbjct: 189 VATAGFVEKK-YPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEG 236

Query: 440 499
           
Sbjct: 249 236

Query: 500 527
           
Sbjct: 309 236

BLAST of CU106770 vs. TrEMBL
Match: A0A0A0KGU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423460 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-12
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = -3

Query: 262 RGRVYIQRLNQALRSRWHDQTVDDVLAMPDQRPCGSFNSSAIL 321
           +G  +IQRLN ALRSRWHD+TVDDVLAMPDQRPCGSFNSSAIL
Sbjct: 233 QGEGFIQRLNLALRSRWHDRTVDDVLAMPDQRPCGSFNSSAIL 275

Query: 322 381
           
Sbjct: 293 275

Query: 382 391
           
Sbjct: 353 275

BLAST of CU106770 vs. NCBI nr
Match: gi|778716617|ref|XP_004140255.2| (PREDICTED: uncharacterized protein LOC101221763 [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 8.5e-13
Identity = 39/49 (79.59%), Postives = 42/49 (85.71%), Query Frame = -2

Query: 380 VATAGILSRRNIPVGTVSTLAACEAMWWKDKDPMEIAMFLDYHEIQGEG 439
           VATAG + ++  P G VSTLAACEAMWWKDKDPMEIAMFLDYHE QGEG
Sbjct: 189 VATAGFVEKK-YPGGAVSTLAACEAMWWKDKDPMEIAMFLDYHERQGEG 236

Query: 440 499
           
Sbjct: 249 236

Query: 500 527
           
Sbjct: 309 236

BLAST of CU106770 vs. NCBI nr
Match: gi|659097291|ref|XP_008449544.1| (PREDICTED: uncharacterized protein LOC103491397 [Cucumis melo])

HSP 1 Score: 72.8 bits (177), Expect = 6.8e-10
Identity = 35/49 (71.43%), Postives = 37/49 (75.51%), Query Frame = -2

Query: 380 VATAGILSRRNIPVGTVSTLAACEAMWWKDKDPMEIAMFLDYHEIQGEG 439
           VA AG + R+    G V TLAACE MWWKDKDPMEIA FLDYHE QGEG
Sbjct: 190 VAAAGFVERK-YSGGAVGTLAACEPMWWKDKDPMEIATFLDYHERQGEG 237

Query: 440 499
           
Sbjct: 250 237

Query: 500 527
           
Sbjct: 310 237

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KGU9_CUCSA5.9e-1379.59Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423460 PE=4 SV=1[more]
A0A0A0KGU9_CUCSA2.9e-1286.05Uncharacterized protein OS=Cucumis sativus GN=Csa_6G423460 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778716617|ref|XP_004140255.2|8.5e-1379.59PREDICTED: uncharacterized protein LOC101221763 [Cucumis sativus][more]
gi|659097291|ref|XP_008449544.1|6.8e-1071.43PREDICTED: uncharacterized protein LOC103491397 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Csa6G423460Csa6G423460gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
FKNP3UI02LN8TAFKNP3UI02LN8TAEST
FKNP3UI02NGA4XFKNP3UI02NGA4XEST
G0041590G0041590EST
G0047339G0047339EST
G0053886G0053886EST
H0114793H0114793EST