Csa6G324870 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G324870
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
Description30S ribosomal protein S6; contains IPR000529 (Ribosomal protein S6), IPR014717 (Translation elongation factor EF1B/ribosomal protein S6)
LocationChr6 : 15132664 .. 15135533 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTTCTTCTTCTTCTTCTTCTGCCATTTCCGTACTTCGGATAAAGAGCCCAACAATCTCTCCCTTCTCAACGTCGAAGTTTGGCTCCAATGGATACTCTTACACTTTTCTCCCCTTCTTCTTCTTCATTTCATTCTTCTCTGAAGTCTCCTAATCTTTTTCTTCTTCGAAATGGCTCTCGCTCTTTCTCTGATTTTCCGAATGTATGCTCTTCCTTTCCCACTCTCAATCTTTCAACTCCTTTCTCTAGAAAATCCATCATTCTCGCTGCTAAGAAGCCCAACGCTCAGCCTAACAAGGACGACGCTCACCGCTCCCTTCCCAAACCTGACGAGTCTATCGGCTTCTTTCCCGAAGCTGTTCTACTTAAGGAGGTGAAATTCTATACTATTCTTTCTTCATACTTATGTTCCTTATCTTTAACTGCCTGCGATTCTTAAACTATTTCCAACCGGTTTCGACCTAAGAACTGAGAGGCCGAAATTAAATAAGTCAGGAATTCTTGGTGGTTTGTTAGAATGTGGTTACCTATGTAAGAAGTCTGAGAACGAATCGGTTTCTTTTGGTTACCTTCTGATATGCCATTAGAGAAACGTATAAGAAATGAGAATTGAAAATTTGATAGGAAGGATAGATGTTGTACTTTTCGTACTCTGTCTTTGAGTTAAAGTTTATAGGAAGCTGCTCAGATATACTGACGTTTAATCTGCTTATATTCTTTTGTAAGTGTGATAAATTTCTTGACTGTACTTTTGGTTTTAATTGGCAGAAAAAAGTTGCAGAAGATGGTCAATTTCTTCCCGAATTTGCTGATGCCGAAGAAGGTGATTGTTTATCTTCCAATTTGGATCCATTCATTTGCTTTCCTTTTAGAAAACTATTGCTCTGGCTATGAACAGGAGTTATCAAATTCACTTTTGCTCTCATTTTGCAGAAAAGCTTTATGAATATTTAAACCTCCAGTTGGAAAGTGAATCCAAAGTTGAACAAAGTAAGCTTACTTTCTGCTTATTCTGGTCAAGTATGATTGAAATAACACAATGAATAGGGAGATGATATTTTAATTATAGATACAATCAGAAAAATGTTGTGTTTATTTAGTTTATGTAATTTTCTCGTCCAACTATTCTCTAAAAAAGGAAAAAGTTTTATCTTATATTTGAAGTGATGTGTTGCGTTGCTTACCTCGTTTCTGCAGTGCGTCACTATGAGATAGTTTTTTTAATTCACGAGAAGAACGCAGAAGAGGTCGAGAGTGTAATTGAGAAAGTTCAAGGTAATGTAACTATTTTGACCCTTTAGCTTTCTTGTGTGACTTTGTGTTGCTTTTAAGGTGTTAGTTTGAATAAAATGGTCATGACCTTTAGTTCTCTTTCAAAACTCCATTTTGGCTGAAGTTGCATGTCTGAGCCTTGTACAGTTTTTCCAGTTTATTGCTCATTTGTGTAGCATAGCATGTGAAATCTCACAACAGTTCTTTTTTCTTCTTCCCACCTGAGTTCTAGTTAGATATGTTTTCTGTAAGTAGCATTGTAGAAGTGAATGTGATTTCCATTTCATGTGCAAGTCCAAAATCAGGTTCGACATCTCAAGAACAGCCTATTGATATTTGCATCCATGTTTCCATGTTTCTTTGCTGCCCATTTGTGCAGCATGTGAAATCTCGTAACTGTTTCTTTTTCTCCCGAGTTCTAGTGCTATATGTTTTCTGTATGTAGCGTTGTTGAAGTGAACGTGATTTCCTTTCCATGTGCAAGTCGAAAATCAGGCTCATCATCTCAAGACCAGCCCGTTGATCCTAGTTGCATCCATGTTTCTCTTGAATTTTGTAGAATTTTCCATTAGTTTCTGATTGAAACATAAACGCTGTTACAGGTTTTCTAAGGGAGAAGAAAGGGAAGCTATGGAGACTGAGTGACTGGGGAATGCGAAGATTAGCGTACAAGATAAAGAAAGCCAAATATGCACATTACATATTGATGAATTTTGAACTGGAGGCCAAATGGATTAATGAATTTAAGAGCATGTTAGATATGGATGAAAGAGTAATTCGACATCTTGTGATTAAGAGGGATACTGCCATCACCGAAGATTGCCCTCCCCCTCCTGAGTTTCATACCCTTCGTGCCGGAATAGATGATGATGATGACAATGAAGAAGATGACATGGATGATTACAACAGTGACGATGAAATGGAATGGGATGATGAGGCGGAGCTGGATGATTATGACGAAGGTTTAGATGATGGGATTATCATTGTTGACAGTGACAACGACACTGACGATAACAGCATAAGTACGACCTCCAAATCAACTGCTGCAGGGAACAGAGGCTTGAGAAATAGAACTAAAAAATGAATGGACAGCTTCGATTTTGGCAGTAGAAGTTGTGGTGAGTTTCATGGCATTGGCTTTGAAGTTTGCTATGAATGCATTGAGCTAATTCTACGAATCCGTGGTGGAGTTTGGCTTCATTTCAGGTATTAAGTTACTGAAAACTGCCATTATTTTTTCCTGAATCATTTGCCCTTTCACAGTTAAAAGGCTTGGAGGTGTTGTAGATCATGTCGATGAACCACATGCCACTCAATTTTGAAATCATCTTCATTACCAGCTTTTATCCATAGGAATCAAAGGTACATGTCGAATCATTCTTTATGTCCATATCGAAGTGATTGTCAAATTCTAAGGGAAACATAGTGATGATGTATGGATGAGATAATTAAGAATTTTAGTGTCATAATATGGAAGTAAAAATGATAAACACAATGAGGAACGTCGTTTTCTAAGAGTTGAGCTTGCAAAGTTGGACGTTTTTGTGAGACGGATCGTAGTTGGATGTTAATTACATTATTTTTGCTATTTTTTTGTT

mRNA sequence

ATGGATACTCTTACACTTTTCTCCCCTTCTTCTTCTTCATTTCATTCTTCTCTGAAGTCTCCTAATCTTTTTCTTCTTCGAAATGGCTCTCGCTCTTTCTCTGATTTTCCGAATGTATGCTCTTCCTTTCCCACTCTCAATCTTTCAACTCCTTTCTCTAGAAAATCCATCATTCTCGCTGCTAAGAAGCCCAACGCTCAGCCTAACAAGGACGACGCTCACCGCTCCCTTCCCAAACCTGACGAGTCTATCGGCTTCTTTCCCGAAGCTGTTCTACTTAAGGAGAAAAAAGTTGCAGAAGATGGTCAATTTCTTCCCGAATTTGCTGATGCCGAAGAAGAAAAGCTTTATGAATATTTAAACCTCCAGTTGGAAAGTGAATCCAAAGTTGAACAAATGCGTCACTATGAGATAGTTTTTTTAATTCACGAGAAGAACGCAGAAGAGGTCGAGAGTGTAATTGAGAAAGTTCAAGGTTTTCTAAGGGAGAAGAAAGGGAAGCTATGGAGACTGAGTGACTGGGGAATGCGAAGATTAGCGTACAAGATAAAGAAAGCCAAATATGCACATTACATATTGATGAATTTTGAACTGGAGGCCAAATGGATTAATGAATTTAAGAGCATGTTAGATATGGATGAAAGAGTAATTCGACATCTTGTGATTAAGAGGGATACTGCCATCACCGAAGATTGCCCTCCCCCTCCTGAGTTTCATACCCTTCGTGCCGGAATAGATGATGATGATGACAATGAAGAAGATGACATGGATGATTACAACAGTGACGATGAAATGGAATGGGATGATGAGGCGGAGCTGGATGATTATGACGAAGGTTTAGATGATGGGATTATCATTGTTGACAGTGACAACGACACTGACGATAACAGCATAAGTACGACCTCCAAATCAACTGCTGCAGGGAACAGAGGCTTGAGAAATAGAACTAAAAAATGA

Coding sequence (CDS)

ATGGATACTCTTACACTTTTCTCCCCTTCTTCTTCTTCATTTCATTCTTCTCTGAAGTCTCCTAATCTTTTTCTTCTTCGAAATGGCTCTCGCTCTTTCTCTGATTTTCCGAATGTATGCTCTTCCTTTCCCACTCTCAATCTTTCAACTCCTTTCTCTAGAAAATCCATCATTCTCGCTGCTAAGAAGCCCAACGCTCAGCCTAACAAGGACGACGCTCACCGCTCCCTTCCCAAACCTGACGAGTCTATCGGCTTCTTTCCCGAAGCTGTTCTACTTAAGGAGAAAAAAGTTGCAGAAGATGGTCAATTTCTTCCCGAATTTGCTGATGCCGAAGAAGAAAAGCTTTATGAATATTTAAACCTCCAGTTGGAAAGTGAATCCAAAGTTGAACAAATGCGTCACTATGAGATAGTTTTTTTAATTCACGAGAAGAACGCAGAAGAGGTCGAGAGTGTAATTGAGAAAGTTCAAGGTTTTCTAAGGGAGAAGAAAGGGAAGCTATGGAGACTGAGTGACTGGGGAATGCGAAGATTAGCGTACAAGATAAAGAAAGCCAAATATGCACATTACATATTGATGAATTTTGAACTGGAGGCCAAATGGATTAATGAATTTAAGAGCATGTTAGATATGGATGAAAGAGTAATTCGACATCTTGTGATTAAGAGGGATACTGCCATCACCGAAGATTGCCCTCCCCCTCCTGAGTTTCATACCCTTCGTGCCGGAATAGATGATGATGATGACAATGAAGAAGATGACATGGATGATTACAACAGTGACGATGAAATGGAATGGGATGATGAGGCGGAGCTGGATGATTATGACGAAGGTTTAGATGATGGGATTATCATTGTTGACAGTGACAACGACACTGACGATAACAGCATAAGTACGACCTCCAAATCAACTGCTGCAGGGAACAGAGGCTTGAGAAATAGAACTAAAAAATGA

Protein sequence

MDTLTLFSPSSSSFHSSLKSPNLFLLRNGSRSFSDFPNVCSSFPTLNLSTPFSRKSIILAAKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYLNLQLESESKVEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHTLRAGIDDDDDNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDNDTDDNSISTTSKSTAAGNRGLRNRTKK*
Homology
[Close]
BLAST of Csa6G324870 vs. Swiss-Prot
Match: RS6_ALCBS (30S ribosomal protein S6 OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) GN=rpsF PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 5.3e-21
Identity = 44/101 (43.56%), Postives = 66/101 (65.35%), Query Frame = 1 

Query: 133 MRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLAYKIKKAKYAHYI 192
           MRHYE+VFL+H   +E+V +++E+    + + KG + R+ DWG R+LAY I K   AHY+
Sbjct: 1   MRHYEVVFLVHPDQSEQVSAMVERYSAIVTDGKGTIHRVEDWGRRQLAYPINKIHKAHYV 60

Query: 193 LMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCP 234
           ++N E + + + E ++    ++ VIRHLVI+RD AITE  P
Sbjct: 61  MLNIECDGETLGELENTFRFNDAVIRHLVIRRDNAITEPSP 101

[Close]
BLAST of Csa6G324870 vs. Swiss-Prot
Match: RS6_CHRVO (30S ribosomal protein S6 OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=rpsF PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.5e-20
Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 1 

Query: 133 MRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLAYKIKKAKYAHYI 192
           MRHYEIVF++H   +E+V ++IE+ +G +   +GK+ RL DWG R+LAY I+K   AHY+
Sbjct: 1   MRHYEIVFIVHPDQSEQVPAMIERYKGMVLAAEGKIHRLEDWGRRQLAYPIQKLHKAHYV 60

Query: 193 LMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCP 234
           LMN E +A+ + E +     ++ V+RHL IK D AI++  P
Sbjct: 61  LMNVECQAETLAEIEHAFKFNDAVLRHLTIKMDRAISDASP 101

[Close]
BLAST of Csa6G324870 vs. Swiss-Prot
Match: RS6_PSEA7 (30S ribosomal protein S6 OS=Pseudomonas aeruginosa (strain PA7) GN=rpsF PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-20
Identity = 55/146 (37.67%), Postives = 83/146 (56.85%), Query Frame = 1 

Query: 133 MRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLAYKIKKAKYAHYI 192
           MRHYEIVFL+H   +E+V  ++E+    + E  GK+ RL DWG R+LAY I     AHY+
Sbjct: 1   MRHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYV 60

Query: 193 LMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHTLRAGIDDDDDNE 252
           LMN E  AK + E +     ++ VIR+LV++RD A+TE      +   L+A    ++  E
Sbjct: 61  LMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTE------QSEMLKAEESRNERRE 120

Query: 253 EDDMDDYNSDDEMEWDDEAELDDYDE 279
             +  + N++   + DD ++ D+ DE
Sbjct: 121 RRERPNDNAEG-ADGDDNSDSDNADE 139

[Close]
BLAST of Csa6G324870 vs. Swiss-Prot
Match: RS6_PSEA8 (30S ribosomal protein S6 OS=Pseudomonas aeruginosa (strain LESB58) GN=rpsF PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-20
Identity = 55/146 (37.67%), Postives = 83/146 (56.85%), Query Frame = 1 

Query: 133 MRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLAYKIKKAKYAHYI 192
           MRHYEIVFL+H   +E+V  ++E+    + E  GK+ RL DWG R+LAY I     AHY+
Sbjct: 1   MRHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYV 60

Query: 193 LMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHTLRAGIDDDDDNE 252
           LMN E  AK + E +     ++ VIR+LV++RD A+TE      +   L+A    ++  E
Sbjct: 61  LMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTE------QSEMLKAEESRNERRE 120

Query: 253 EDDMDDYNSDDEMEWDDEAELDDYDE 279
             +  + N++   + DD ++ D+ DE
Sbjct: 121 RRERPNDNAEG-ADGDDNSDSDNADE 139

[Close]
BLAST of Csa6G324870 vs. Swiss-Prot
Match: RS6_PSEAB (30S ribosomal protein S6 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rpsF PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.0e-20
Identity = 55/146 (37.67%), Postives = 83/146 (56.85%), Query Frame = 1 

Query: 133 MRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLAYKIKKAKYAHYI 192
           MRHYEIVFL+H   +E+V  ++E+    + E  GK+ RL DWG R+LAY I     AHY+
Sbjct: 1   MRHYEIVFLVHPDQSEQVGGMVERYTKAIEEDGGKIHRLEDWGRRQLAYAINNVHKAHYV 60

Query: 193 LMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHTLRAGIDDDDDNE 252
           LMN E  AK + E +     ++ VIR+LV++RD A+TE      +   L+A    ++  E
Sbjct: 61  LMNVECSAKALAELEDNFRYNDAVIRNLVMRRDEAVTE------QSEMLKAEESRNERRE 120

Query: 253 EDDMDDYNSDDEMEWDDEAELDDYDE 279
             +  + N++   + DD ++ D+ DE
Sbjct: 121 RRERPNDNAEG-ADGDDNSDSDNADE 139

[Close]
BLAST of Csa6G324870 vs. TrEMBL
Match: A0A0A0KD50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G324870 PE=3 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 5.5e-182
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1 

Query: 1   MDTLTLFSPSSSSFHSSLKSPNLFLLRNGSRSFSDFPNVCSSFPTLNLSTPFSRKSIILA 60
           MDTLTLFSPSSSSFHSSLKSPNLFLLRNGSRSFSDFPNVCSSFPTLNLSTPFSRKSIILA
Sbjct: 1   MDTLTLFSPSSSSFHSSLKSPNLFLLRNGSRSFSDFPNVCSSFPTLNLSTPFSRKSIILA 60

Query: 61  AKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYL 120
           AKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYL
Sbjct: 61  AKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYL 120

Query: 121 NLQLESESKVEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLA 180
           NLQLESESKVEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLA
Sbjct: 121 NLQLESESKVEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLA 180

Query: 181 YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHT 240
           YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHT
Sbjct: 181 YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHT 240

Query: 241 LRAGIDDDDDNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDNDTDDNSIST 300
           LRAGIDDDDDNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDNDTDDNSIST
Sbjct: 241 LRAGIDDDDDNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDNDTDDNSIST 300

Query: 301 TSKSTAAGNRGLRNRTKK 319
           TSKSTAAGNRGLRNRTKK
Sbjct: 301 TSKSTAAGNRGLRNRTKK 318

[Close]
BLAST of Csa6G324870 vs. TrEMBL
Match: A0A067K6R2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19040 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.8e-93
Identity = 175/267 (65.54%), Postives = 214/267 (80.15%), Query Frame = 1 

Query: 54  RKSIILAAKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEE 113
           RKS+I+ AKK N    K+D+H  +PKPDE+ G FPEAVLLKEKKV EDG+F+PEFADAEE
Sbjct: 64  RKSVIVGAKK-NRNSKKEDSHSFIPKPDEATGPFPEAVLLKEKKVQEDGKFIPEFADAEE 123

Query: 114 EKLYEYLNLQLESESKVEQ-MRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLS 173
           EKLYEYL+L+LESE   E+ +RHYE+V+LIHEK+AEEV  V EKV+ FLREKKGK+WRL+
Sbjct: 124 EKLYEYLSLELESELNAEERIRHYEVVYLIHEKHAEEVGKVNEKVEDFLREKKGKIWRLN 183

Query: 174 DWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDC 233
           DWGMRRLAYKIKKA  AHYILMNFE+EAKWIN+FK+MLD DERVIRHLVIKRD AITEDC
Sbjct: 184 DWGMRRLAYKIKKATNAHYILMNFEIEAKWINDFKTMLDKDERVIRHLVIKRDEAITEDC 243

Query: 234 PPPPEFHTLRAGIDD-DDDNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDN 293
           PPP EFHTLR G+DD D+D++EDD  DY+ D    WD E E++ YD+  +DGI +++S N
Sbjct: 244 PPPLEFHTLRGGMDDNDEDDDEDDDLDYDED----WDGEGEMEGYDDDTEDGITVINS-N 303

Query: 294 DTDDNSISTTSKSTAAGNRGLRNRTKK 319
           D DD      +KS    ++G RN+ ++
Sbjct: 304 DIDDGRDDQNNKSIPVNDKGGRNQKRE 324

[Close]
BLAST of Csa6G324870 vs. TrEMBL
Match: W9RJT9_9ROSA (30S ribosomal protein S6 OS=Morus notabilis GN=L484_005957 PE=3 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 3.4e-91
Identity = 176/291 (60.48%), Postives = 222/291 (76.29%), Query Frame = 1 

Query: 14  FHSSLKSPNLFLLRNGSRSFSDFPNVCSSFPTLNLSTPFSR-KSIILAAKKPNAQPNKDD 73
           FHSS  +   FL    S +     N+ SS P L L    SR KS+I+ AKK +   NK D
Sbjct: 5   FHSSASTA--FLTPKSSINPKPTINI-SSLPPLKLFVAQSRRKSVIVGAKKKS---NKQD 64

Query: 74  AHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYLNLQLESESKVEQ 133
           AH  +PKPDE+ G FPEAVLLK+KKV +DG+FLPEFADA+EE +Y+ L LQLE++  VE 
Sbjct: 65  AHSFVPKPDEATGPFPEAVLLKQKKVEKDGEFLPEFADADEENIYQVLKLQLENDLLVES 124

Query: 134 MRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLAYKIKKAKYAHYI 193
           +RHYE+V+LIHEK+A+EVE V +KVQ FLREK+GK+WRL+DWGMRRLAYKI+KAK AHY 
Sbjct: 125 LRHYEVVYLIHEKHADEVEKVNQKVQDFLREKRGKIWRLNDWGMRRLAYKIQKAKNAHYF 184

Query: 194 LMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHTLRAGIDDDDDNE 253
           LMNFE+EAKWIN+FKSMLD +ERVIRHLV+KRD AITEDCPPPPE HTLRAG+DDD++ E
Sbjct: 185 LMNFEIEAKWINDFKSMLDKEERVIRHLVMKRDEAITEDCPPPPELHTLRAGMDDDEE-E 244

Query: 254 EDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDNDTDDNSISTTSK 304
           EDD+D  +   + EWD E E+D+Y     DG+I V+SD + +D + S+ ++
Sbjct: 245 EDDLDYDDEYYDEEWDGEGEIDEYGNEDGDGVIFVNSDEEDEDRTSSSKTR 288

[Close]
BLAST of Csa6G324870 vs. TrEMBL
Match: D7SYH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00590 PE=3 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 5.8e-91
Identity = 177/274 (64.60%), Postives = 213/274 (77.74%), Query Frame = 1 

Query: 25  LLRNGSRSFSDFPNVCSSFPTLNLSTPFSRKSIILAAKKPNAQPNKDDAHRSLPKPDESI 84
           L+ NG  +++  P +  S    ++S    RKS++  AKK   + +  DAH  +PKPDE+ 
Sbjct: 21  LVGNGGITWNQTPFLTFSKGYSSISANRLRKSVVAEAKK--RKKDSVDAHNFVPKPDEAT 80

Query: 85  GFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYLNLQLESESKVEQMRHYEIVFLIHE 144
           G FPEAVLLKEKK  EDG FLPEFADAEEE+LYE+LNLQLES+  VE+MRHYE+V+LIHE
Sbjct: 81  GVFPEAVLLKEKKAQEDGSFLPEFADAEEEELYEFLNLQLESDLNVERMRHYEVVYLIHE 140

Query: 145 KNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWIN 204
           K+ EEVE+V  KVQ F+REKKGKLWRL+DWG+RRLAYKI+KAK AHYILMNFELEA+WIN
Sbjct: 141 KHDEEVENVNSKVQDFIREKKGKLWRLNDWGLRRLAYKIQKAKNAHYILMNFELEAQWIN 200

Query: 205 EFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHTLRAGIDDDDDNEEDDMDDYNSDDE 264
           +FK+MLD DERVIRHLVIKRD AITEDCPPPPEFHTLRAG DD DD EEDD+D    DDE
Sbjct: 201 DFKTMLDQDERVIRHLVIKRDEAITEDCPPPPEFHTLRAGTDDYDD-EEDDVD---YDDE 260

Query: 265 MEWDDEAELD--DYDEGLDDGIIIVDSDNDTDDN 297
            +WD E E+D   Y + + D I+ V+SD+  D N
Sbjct: 261 DDWDGEGEVDSNSYSDDVVDVIVPVNSDDREDKN 288

[Close]
BLAST of Csa6G324870 vs. TrEMBL
Match: A0A061EP44_THECC (Translation elongation factor EF1B/ribosomal protein S6 family protein OS=Theobroma cacao GN=TCM_021419 PE=3 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 2.2e-90
Identity = 184/303 (60.73%), Postives = 223/303 (73.60%), Query Frame = 1 

Query: 20  SPNLFLLRNGSRSFSDFPNVCSSFPTLNLSTPF--SRKSIILAAKKPNAQPNKDDAHRSL 79
           +P L  L+ GS  F +     SSF  L     +   RK +I+ AKK   + NK D+H  +
Sbjct: 110 APRLPKLKTGSGFFGNQ----SSFLKLPQENSYLGRRKLLIVEAKKNKNKDNKQDSHSFI 169

Query: 80  PKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYLNLQLESESKVEQMRHYE 139
           PKPDE+ GFFPEAVLLKEKKV EDG+ LPEFAD EE++LYE LNLQL+S   VE+MRHYE
Sbjct: 170 PKPDETTGFFPEAVLLKEKKVQEDGKLLPEFADDEEQELYESLNLQLQSALNVERMRHYE 229

Query: 140 IVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLAYKIKKAKYAHYILMNFE 199
           +V+LIHEK+AEEV SV EKVQ FLREK+G+LWRL+DWG+RRLAYKIKKAK AHYILMNFE
Sbjct: 230 VVYLIHEKHAEEVGSVNEKVQDFLREKRGRLWRLNDWGLRRLAYKIKKAKNAHYILMNFE 289

Query: 200 LEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHTLRAGIDDDDDNEED-DM 259
           LEA+WINEFK+MLD DERVIRHLVIKRD AITEDCPPPPE+HTLRAG DD D+ E+D D 
Sbjct: 290 LEARWINEFKTMLDKDERVIRHLVIKRDEAITEDCPPPPEWHTLRAGGDDYDEEEDDADY 349

Query: 260 DDYNSDDE----MEWDDEAELDDY-DEGLDDGIIIVDSDNDTDDNSISTTSKSTAAGNRG 315
           D Y  +D+     +WD E + D + D G++DG II   D+D +D      +KS +  N G
Sbjct: 350 DVYEVEDDEDLGEDWDGEDDSDIFEDNGVEDG-IIAGKDDDIED----LNNKSASVANTG 403

[Close]
BLAST of Csa6G324870 vs. TAIR10
Match: AT3G17170.1 (AT3G17170.1 Translation elongation factor EF1B/ribosomal protein S6 family protein)

HSP 1 Score: 297.7 bits (761), Expect = 8.3e-81
Identity = 156/309 (50.49%), Postives = 217/309 (70.23%), Query Frame = 1 

Query: 12  SSFHSSLKSPNLFLLRNGSRSFSDFPNVCSSFPTLNL--STPFSRKSIILAAKKPNAQPN 71
           S  H+S    +L    +G  SF +   VC + P+L    S P     ++ AAKK  ++  
Sbjct: 3   SLLHASSSLVSLRPRIDGRDSFINPSRVCLN-PSLGRRGSKPLP---LVAAAKKKKSK-- 62

Query: 72  KDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYLNLQLESESK 131
           KDD H    +PDE+ G FPE++LLKEKK+ E+G  LPEFADAEE++LY++L+LQL+S+  
Sbjct: 63  KDDNHNFSARPDEATGPFPESILLKEKKIDEEGDLLPEFADAEEKELYQFLDLQLQSDLN 122

Query: 132 VEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLAYKIKKAKYA 191
            E+MRHYE+V+LIHEK+AEEVES+ +KVQ +L+EKKGK+WR SDWGMRRLAYKI+KA+ A
Sbjct: 123 EERMRHYEVVYLIHEKHAEEVESINQKVQDYLKEKKGKVWRFSDWGMRRLAYKIQKAENA 182

Query: 192 HYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHTLRAGIDDDD 251
           HYILMNFE+EAK++NEFK +LD DERVIRHLV+KRD AITEDCPPPPEFH++RAG +  D
Sbjct: 183 HYILMNFEIEAKYLNEFKGLLDSDERVIRHLVMKRDEAITEDCPPPPEFHSVRAGDEYYD 242

Query: 252 DNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDG---IIIVDSDNDTDDNSISTTSKSTA 311
           D+EE+++++   +DE E +DE + D+ +  +DD    ++++  D +  +      S+   
Sbjct: 243 DDEEEEIEE--DEDEGEGEDEEDADNIEYEVDDDGNVVMVLYGDEEEGEEEEDGASEQEE 302

Query: 312 AGNRGLRNR 316
             ++    R
Sbjct: 303 GQDKSTNGR 303

[Close]
BLAST of Csa6G324870 vs. NCBI nr
Match: gi|449462132|ref|XP_004148795.1| (PREDICTED: probable dual specificity protein phosphatase DDB_G0281963 [Cucumis sativus])

HSP 1 Score: 644.8 bits (1662), Expect = 7.8e-182
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 1 

Query: 1   MDTLTLFSPSSSSFHSSLKSPNLFLLRNGSRSFSDFPNVCSSFPTLNLSTPFSRKSIILA 60
           MDTLTLFSPSSSSFHSSLKSPNLFLLRNGSRSFSDFPNVCSSFPTLNLSTPFSRKSIILA
Sbjct: 1   MDTLTLFSPSSSSFHSSLKSPNLFLLRNGSRSFSDFPNVCSSFPTLNLSTPFSRKSIILA 60

Query: 61  AKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYL 120
           AKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYL
Sbjct: 61  AKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYL 120

Query: 121 NLQLESESKVEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLA 180
           NLQLESESKVEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLA
Sbjct: 121 NLQLESESKVEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLA 180

Query: 181 YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHT 240
           YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHT
Sbjct: 181 YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHT 240

Query: 241 LRAGIDDDDDNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDNDTDDNSIST 300
           LRAGIDDDDDNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDNDTDDNSIST
Sbjct: 241 LRAGIDDDDDNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDNDTDDNSIST 300

Query: 301 TSKSTAAGNRGLRNRTKK 319
           TSKSTAAGNRGLRNRTKK
Sbjct: 301 TSKSTAAGNRGLRNRTKK 318

[Close]
BLAST of Csa6G324870 vs. NCBI nr
Match: gi|659116919|ref|XP_008458328.1| (PREDICTED: uncharacterized protein LOC103497776 [Cucumis melo])

HSP 1 Score: 583.2 bits (1502), Expect = 2.8e-163
Identity = 295/325 (90.77%), Postives = 302/325 (92.92%), Query Frame = 1 

Query: 1   MDTLTLFSPSSSS------FHSSLKSPN-LFLLRNGSRSFSDFPNVCSSFPTLNLSTPFS 60
           MD LTLFSPSSSS       HSSLKS N LFLLRNGSRSFSDFPNVCSSFPTLNL T FS
Sbjct: 1   MDALTLFSPSSSSSSFSSSIHSSLKSHNNLFLLRNGSRSFSDFPNVCSSFPTLNLPTRFS 60

Query: 61  RKSIILAAKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEE 120
           RKSIILAAKK NA+PNKDD HRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEE
Sbjct: 61  RKSIILAAKKTNAKPNKDDGHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEE 120

Query: 121 EKLYEYLNLQLESESKVEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSD 180
           EKLYEYLNLQLESESKVEQMRHYE+VFLIHEKNAEEVESVIEKVQGFLREKKGK+WRLSD
Sbjct: 121 EKLYEYLNLQLESESKVEQMRHYEVVFLIHEKNAEEVESVIEKVQGFLREKKGKVWRLSD 180

Query: 181 WGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCP 240
           WGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCP
Sbjct: 181 WGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCP 240

Query: 241 PPPEFHTLRAGIDDDDDNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDNDT 300
           PPPEFHTLRAG+DDDDDNEEDDMDDYNS DEM+WDDE ELDDYD+G DDGIIIVDSDN  
Sbjct: 241 PPPEFHTLRAGVDDDDDNEEDDMDDYNSADEMDWDDEDELDDYDDGFDDGIIIVDSDN-- 300

Query: 301 DDNSISTTSKSTAAGNRGLRNRTKK 319
           DD S STTSKSTA GN GLRN+TKK
Sbjct: 301 DDTSKSTTSKSTATGNIGLRNKTKK 323

[Close]
BLAST of Csa6G324870 vs. NCBI nr
Match: gi|1009172469|ref|XP_015867288.1| (PREDICTED: protein SET-like [Ziziphus jujuba])

HSP 1 Score: 350.5 bits (898), Expect = 3.1e-93
Identity = 189/318 (59.43%), Postives = 235/318 (73.90%), Query Frame = 1 

Query: 10  SSSSFHSSLKSPNLFLLRNGSRSFSDFPNVC--------SSFP-TLNLSTPFSRKSIILA 69
           S S+ H + K+  L      S S S   N C        S++P T    +  SRKS+I+ 
Sbjct: 7   SCSAAHLTAKASKL----ESSNSSSGNRNPCLVLANGYSSTWPLTTQKLSVGSRKSVIVG 66

Query: 70  AKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYL 129
           AKK N    K+D H  + KPDE+ G FPEAVLLKEKKV EDG+ LPEFADAEEE +YE+L
Sbjct: 67  AKKNN---KKEDTHSFVAKPDEATGPFPEAVLLKEKKVQEDGKLLPEFADAEEENVYEFL 126

Query: 130 NLQLESESKVEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLA 189
            LQL+S+  VE+MRHYE+V+LIHEK+AEEV SV EKVQ FLREK+GK+WR+SDWGMRRLA
Sbjct: 127 KLQLQSDLNVERMRHYEVVYLIHEKHAEEVGSVNEKVQDFLREKRGKIWRMSDWGMRRLA 186

Query: 190 YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHT 249
           YKI+KAK AHYILMNFE+EAKWIN+FKSMLD DERVIRHLVIKRD AITEDCPPPPEFHT
Sbjct: 187 YKIQKAKNAHYILMNFEIEAKWINDFKSMLDKDERVIRHLVIKRDEAITEDCPPPPEFHT 246

Query: 250 LRAGIDDDDDNEEDDMDDYNSDDEME-WDD----EAELDDYDEGLDDGIIIVDSDNDTDD 309
           LR+G+DDDDD+EE+  DDY+ + ++E WD+    + +LD Y++G +D  II+ S+ D D 
Sbjct: 247 LRSGMDDDDDDEEE--DDYDDEYDIEDWDEDEDGDGDLDGYEDGTEDDSIILKSEEDEDK 306

Query: 310 NSISTTSKSTAAGNRGLR 314
           N  +  +K +  G+R LR
Sbjct: 307 N--NNITKLSKTGDRKLR 313

[Close]
BLAST of Csa6G324870 vs. NCBI nr
Match: gi|802705666|ref|XP_012084128.1| (PREDICTED: uncharacterized protein LOC105643577 [Jatropha curcas])

HSP 1 Score: 350.1 bits (897), Expect = 4.0e-93
Identity = 175/267 (65.54%), Postives = 214/267 (80.15%), Query Frame = 1 

Query: 54  RKSIILAAKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEE 113
           RKS+I+ AKK N    K+D+H  +PKPDE+ G FPEAVLLKEKKV EDG+F+PEFADAEE
Sbjct: 64  RKSVIVGAKK-NRNSKKEDSHSFIPKPDEATGPFPEAVLLKEKKVQEDGKFIPEFADAEE 123

Query: 114 EKLYEYLNLQLESESKVEQ-MRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLS 173
           EKLYEYL+L+LESE   E+ +RHYE+V+LIHEK+AEEV  V EKV+ FLREKKGK+WRL+
Sbjct: 124 EKLYEYLSLELESELNAEERIRHYEVVYLIHEKHAEEVGKVNEKVEDFLREKKGKIWRLN 183

Query: 174 DWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDC 233
           DWGMRRLAYKIKKA  AHYILMNFE+EAKWIN+FK+MLD DERVIRHLVIKRD AITEDC
Sbjct: 184 DWGMRRLAYKIKKATNAHYILMNFEIEAKWINDFKTMLDKDERVIRHLVIKRDEAITEDC 243

Query: 234 PPPPEFHTLRAGIDD-DDDNEEDDMDDYNSDDEMEWDDEAELDDYDEGLDDGIIIVDSDN 293
           PPP EFHTLR G+DD D+D++EDD  DY+ D    WD E E++ YD+  +DGI +++S N
Sbjct: 244 PPPLEFHTLRGGMDDNDEDDDEDDDLDYDED----WDGEGEMEGYDDDTEDGITVINS-N 303

Query: 294 DTDDNSISTTSKSTAAGNRGLRNRTKK 319
           D DD      +KS    ++G RN+ ++
Sbjct: 304 DIDDGRDDQNNKSIPVNDKGGRNQKRE 324

[Close]
BLAST of Csa6G324870 vs. NCBI nr
Match: gi|1009173434|ref|XP_015867812.1| (PREDICTED: protein SET-like [Ziziphus jujuba])

HSP 1 Score: 349.7 bits (896), Expect = 5.2e-93
Identity = 188/318 (59.12%), Postives = 235/318 (73.90%), Query Frame = 1 

Query: 10  SSSSFHSSLKSPNLFLLRNGSRSFSDFPNVC--------SSFP-TLNLSTPFSRKSIILA 69
           S S+ H + K+  L      S S S   N C        S++P T    +  SRKS+I+ 
Sbjct: 7   SCSAAHLTAKASKL----ESSNSSSGNRNPCLVLANGYSSTWPLTTQKLSVGSRKSVIVG 66

Query: 70  AKKPNAQPNKDDAHRSLPKPDESIGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYL 129
           AKK N    K+D H  + KPDE+ G FPEAVLLKEKKV EDG+ LPEFADAEEE +YE+L
Sbjct: 67  AKKNN---KKEDTHSFVAKPDEATGPFPEAVLLKEKKVQEDGKLLPEFADAEEENVYEFL 126

Query: 130 NLQLESESKVEQMRHYEIVFLIHEKNAEEVESVIEKVQGFLREKKGKLWRLSDWGMRRLA 189
            LQL+S+  VE+MRHYE+V+LIHEK+AEEV SV EKVQ FLREK+GK+WR+SDWGMRRLA
Sbjct: 127 KLQLQSDLNVERMRHYEVVYLIHEKHAEEVGSVNEKVQDFLREKRGKIWRMSDWGMRRLA 186

Query: 190 YKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDTAITEDCPPPPEFHT 249
           YKI+KAK AHYILMNFE+EAKWIN+FKSMLD DERVIRHLVIKRD AITEDCPPPPEFHT
Sbjct: 187 YKIQKAKNAHYILMNFEIEAKWINDFKSMLDKDERVIRHLVIKRDEAITEDCPPPPEFHT 246

Query: 250 LRAGIDDDDDNEEDDMDDYNSDDEME-WDD----EAELDDYDEGLDDGIIIVDSDNDTDD 309
           LR+G+DDDDD+EE+  DDY+ + ++E WD+    + +LD Y++G +D  I++ S+ D D 
Sbjct: 247 LRSGMDDDDDDEEE--DDYDDEYDIEDWDEDEDGDGDLDGYEDGTEDDSILLKSEEDEDK 306

Query: 310 NSISTTSKSTAAGNRGLR 314
           N  +  +K +  G+R LR
Sbjct: 307 N--NNITKLSKTGDRKLR 313

The following BLAST results are available for this feature:
BLAST of Csa6G324870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS6_ALCBS5.3e-2143.5630S ribosomal protein S6 OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11... [more]
RS6_CHRVO1.5e-2045.5430S ribosomal protein S6 OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 3... [more]
RS6_PSEA72.0e-2037.6730S ribosomal protein S6 OS=Pseudomonas aeruginosa (strain PA7) GN=rpsF PE=3 SV=... [more]
RS6_PSEA82.0e-2037.6730S ribosomal protein S6 OS=Pseudomonas aeruginosa (strain LESB58) GN=rpsF PE=3 ... [more]
RS6_PSEAB2.0e-2037.6730S ribosomal protein S6 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=rpsF P... [more]
BLAST of Csa6G324870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD50_CUCSA5.5e-182100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G324870 PE=3 SV=1[more]
A0A067K6R2_JATCU2.8e-9365.54Uncharacterized protein OS=Jatropha curcas GN=JCGZ_19040 PE=3 SV=1[more]
W9RJT9_9ROSA3.4e-9160.4830S ribosomal protein S6 OS=Morus notabilis GN=L484_005957 PE=3 SV=1[more]
D7SYH9_VITVI5.8e-9164.60Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g00590 PE=3 SV=... [more]
A0A061EP44_THECC2.2e-9060.73Translation elongation factor EF1B/ribosomal protein S6 family protein OS=Theobr... [more]
BLAST of Csa6G324870 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G17170.18.3e-8150.49 Translation elongation factor EF1B/ribosomal protein S6 family prot... [more]
BLAST of Csa6G324870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462132|ref|XP_004148795.1|7.8e-182100.00PREDICTED: probable dual specificity protein phosphatase DDB_G0281963 [Cucumis s... [more]
gi|659116919|ref|XP_008458328.1|2.8e-16390.77PREDICTED: uncharacterized protein LOC103497776 [Cucumis melo][more]
gi|1009172469|ref|XP_015867288.1|3.1e-9359.43PREDICTED: protein SET-like [Ziziphus jujuba][more]
gi|802705666|ref|XP_012084128.1|4.0e-9365.54PREDICTED: uncharacterized protein LOC105643577 [Jatropha curcas][more]
gi|1009173434|ref|XP_015867812.1|5.2e-9359.12PREDICTED: protein SET-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000529Ribosomal_S6
IPR014717Transl_elong_EF1B/ribosomal_S6
IPR020814Ribosomal_S6_plastid/chlpt
IPR020815Ribosomal_S6_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0019843rRNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0006414 translational elongation
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0070181 small ribosomal subunit rRNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU125116cucumber EST collection version 3.0transcribed_cluster
CU125594cucumber EST collection version 3.0transcribed_cluster
CU159075cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G324870.1Csa6G324870.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU125594CU125594transcribed_cluster
CU125116CU125116transcribed_cluster
CU159075CU159075transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000529Ribosomal protein S6PFAMPF01250Ribosomal_S6coord: 135..223
score: 1.1
IPR000529Ribosomal protein S6TIGRFAMsTIGR00166TIGR00166coord: 133..225
score: 2.4
IPR000529Ribosomal protein S6unknownSSF54995Ribosomal protein S6coord: 133..233
score: 2.35
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3DG3DSA:3.30.70.60coord: 133..233
score: 1.7
IPR020814Ribosomal protein S6, plastid/chloroplastHAMAPMF_00360Ribosomal_S6coord: 133..226
score: 20
IPR020815Ribosomal protein S6, conserved sitePROSITEPS01048RIBOSOMAL_S6coord: 175..184
scor
NoneNo IPR availablePANTHERPTHR21011MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6coord: 57..266
score: 2.0E
NoneNo IPR availablePANTHERPTHR21011:SF4SUBFAMILY NOT NAMEDcoord: 57..266
score: 2.0E