Cla97C06G113840 (gene) Watermelon (97103) v2
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTACGCTTCTCTTCTCCCCTTCTTCTTCTTCTTCTTCTTCAGCTTATCATTCTCTGAAGGCTCACACTCTGTTTCTTCGTCGAAATGGCTCACGCTCTTTCTCTGATTTTCCGAATCTTTGCTCTTCGTTTTGCACTCTCAATCCACCAACTGGATTCCCAAGAAAATCCGCCATTCTCGCAGCAAAGAAGACCAACAAGGAGGACGGTCACCGCTCCGTACCCAAGCCTGACGAGTCCACCGGCTTCTTCCCTGAAGCTGTTCTGCTAAAGGAGGTGGAATTCCATACTACTCTATCTTCCTTCTTTTTTCTTTTTCTTTTTAATCTATATATTATGTTTGTGTGTTTGCATCCATCATCATATGTTCATTGTCTTGAAATTTCTGCGATTCTTTGCTCTTTGAACTACTTCCAACCGATTTCGACCTAAAAACCGAGAAGCGGAAATTAAAGAAACCGAGAATTCGTGATGGTTTGTTAGAATGTCTACCTATATCCGAGTTCTGAGAACGATTCCGCTTCTTTTCGTTACCTTCTGATGTGCCACTCGAGAAACGTCTAAGAAACGAGAATTGAAACTCCTAAGGATAGATATTGTACTTCTCGTACCATTGCTCTGGGCCAAAGTTGATAGGAAGCTGCTTAGATATACTGACGTTTAACCTGCTGATATACTTTTGTTAGTCTGAGAAATTTCTTGAGTGGACTTTTGGTTCTAATTGGCAGAAAAAGGTTGCAGAAGATGGTCAATTTCTTCCCGAATTTGCTGATGCGGAAGAAGGTGATTGTTTCTCTTCCATTTTGGATCCATTCATCGGCTTTCCTTTTTAGAAGATTATTTGGCTACGAACAGGAATTATCAAATTCACTTTTGCCCCCATTTTGCAGAAAAGCTTTATGAATATTTGAACCTTCAGTTGGAAAGTGAAACGAAAGTTGATCAAAGTAAGTTTACTTTCTGCTTATTCTGGTCAATTATGATTAATATAATACAATGAATAGGGAGTTGGTATTTTAATTTCTAACACAAGCAGAAAAATGTTGTATTTATCTGGTTTATGTAATTTTCTTGTCCAACCATTGTCTAAAGAAGGCAAAAGTTTTATCCTATATTTGAAGTGATGTGTTGCTTATCTTGTTACTGCAGTGCGTCACTACGAGGTAGTCTTCCTAATTCACGAGAAGAATGCAGAAGAGGTTGAGAGTGTAAATGAGAAAGTTCAAGGTAATATAACTATTTTGACACTTTGGCTCTCTCATTCAGTGACTTTGTGCTGTCTGTAAAGTGTTAGTTTGAATAAATTGGTTGTGAGTTTTAGTTCTCTTTCTGACAATCAAAGATAAACAGAAAATGCAAAGCAAAAGAGATCGACACAGAGATGTACGTGGTCCACCAATAGCGTGTTAGCTCCATCCATGGGGCAAAGGGAGATCAACTTTATTTAGAAAGAATAATACAAATTGCAGAAATTGAGGCGCTTCTAGTGTTAGAGAGTTTATATAGTGCAAAGTTATAAACATGAGTAACATAAAGATGGCAAATACATAAATAACTTAGTGAACCACTTAAAACTACCACGATTTGTTGCCCCTCGTACTTGGTTGTTTGAAGCGCCATATACTAGATTCAAAGCATTCCAACACTTTCAAAATTGCAACTTGGCTGAAGTTGCATTTTTGAGCCTTCTCCAGTTTTTCCAATATGTTGCTCATTTGTGCGACATGTGAAGTCTCATAGCTGTTCTTTTTTCTCTGGAGTTCTAGCATGATATGTTTTCTGTAACTAGTGTTGTAGACGTGAATGTGATTTCCATTTCATGTGCAAGTCGAGAATCAGGCTCAGCATCTCAAGACCAGCCAATTGATCCTAGTTACACCAATGTTTTTTTGGAGTTTTGTTGAATTTTCCATTAGTTTCTGATTTAAATATAAATGTCGTTGCAGGTTTTCTAAGGGAGAAGAAAGGGAGGATATGGAGACTGAGTGACTGGGGAATGCGAAGATTGGCATACAAGATAAAGAAAGCCAAGTATGCACATTACATATTGATGAATTTTGAACTGGAGGCCAAATGGATCAATGAATTTAAGAGCATGTTAGATATGGATGAAAGAGTAATTCGACATCTCGTGATTAAGAGGGATGCTGCTATCACCGAAGATTGCCCTCCCCCTCCTGAGTTTCACACGCTTCGTGCAGGAGTAGATGATGATGACAGTGAAGAAGATGACATGGATGATTATGATAGTGAGGATGAAATGGATTGGGATGGTGAGGATGAGTTGGATGATTATGGTGATGAGTTTGAAGATGGGATCATCATTGTTGACAGTGACAACGATGATGATGACAACAAAAGTAAGGCCACCAAATCAGCTGCCAGCAACAAAGGCTTGAGAAATAGAACTCAAAAATAA ATGGGTACGCTTCTCTTCTCCCCTTCTTCTTCTTCTTCTTCTTCAGCTTATCATTCTCTGAAGGCTCACACTCTGTTTCTTCGTCGAAATGGCTCACGCTCTTTCTCTGATTTTCCGAATCTTTGCTCTTCGTTTTGCACTCTCAATCCACCAACTGGATTCCCAAGAAAATCCGCCATTCTCGCAGCAAAGAAGACCAACAAGGAGGACGGTCACCGCTCCGTACCCAAGCCTGACGAGTCCACCGGCTTCTTCCCTGAAGCTGTTCTGCTAAAGGAGAAAAAGGTTGCAGAAGATGGTCAATTTCTTCCCGAATTTGCTGATGCGGAAGAAGAAAAGCTTTATGAATATTTGAACCTTCAGTTGGAAAGTGAAACGAAAGTTGATCAAATGCGTCACTACGAGGTAGTCTTCCTAATTCACGAGAAGAATGCAGAAGAGGTTGAGAGTGTAAATGAGAAAGTTCAAGGTTTTCTAAGGGAGAAGAAAGGGAGGATATGGAGACTGAGTGACTGGGGAATGCGAAGATTGGCATACAAGATAAAGAAAGCCAAGTATGCACATTACATATTGATGAATTTTGAACTGGAGGCCAAATGGATCAATGAATTTAAGAGCATGTTAGATATGGATGAAAGAGTAATTCGACATCTCGTGATTAAGAGGGATGCTGCTATCACCGAAGATTGCCCTCCCCCTCCTGAGTTTCACACGCTTCGTGCAGGAGTAGATGATGATGACAGTGAAGAAGATGACATGGATGATTATGATAGTGAGGATGAAATGGATTGGGATGGTGAGGATGAGTTGGATGATTATGGTGATGAGTTTGAAGATGGGATCATCATTGTTGACAGTGACAACGATGATGATGACAACAAAAGTAAGGCCACCAAATCAGCTGCCAGCAACAAAGGCTTGAGAAATAGAACTCAAAAATAA ATGGGTACGCTTCTCTTCTCCCCTTCTTCTTCTTCTTCTTCTTCAGCTTATCATTCTCTGAAGGCTCACACTCTGTTTCTTCGTCGAAATGGCTCACGCTCTTTCTCTGATTTTCCGAATCTTTGCTCTTCGTTTTGCACTCTCAATCCACCAACTGGATTCCCAAGAAAATCCGCCATTCTCGCAGCAAAGAAGACCAACAAGGAGGACGGTCACCGCTCCGTACCCAAGCCTGACGAGTCCACCGGCTTCTTCCCTGAAGCTGTTCTGCTAAAGGAGAAAAAGGTTGCAGAAGATGGTCAATTTCTTCCCGAATTTGCTGATGCGGAAGAAGAAAAGCTTTATGAATATTTGAACCTTCAGTTGGAAAGTGAAACGAAAGTTGATCAAATGCGTCACTACGAGGTAGTCTTCCTAATTCACGAGAAGAATGCAGAAGAGGTTGAGAGTGTAAATGAGAAAGTTCAAGGTTTTCTAAGGGAGAAGAAAGGGAGGATATGGAGACTGAGTGACTGGGGAATGCGAAGATTGGCATACAAGATAAAGAAAGCCAAGTATGCACATTACATATTGATGAATTTTGAACTGGAGGCCAAATGGATCAATGAATTTAAGAGCATGTTAGATATGGATGAAAGAGTAATTCGACATCTCGTGATTAAGAGGGATGCTGCTATCACCGAAGATTGCCCTCCCCCTCCTGAGTTTCACACGCTTCGTGCAGGAGTAGATGATGATGACAGTGAAGAAGATGACATGGATGATTATGATAGTGAGGATGAAATGGATTGGGATGGTGAGGATGAGTTGGATGATTATGGTGATGAGTTTGAAGATGGGATCATCATTGTTGACAGTGACAACGATGATGATGACAACAAAAGTAAGGCCACCAAATCAGCTGCCAGCAACAAAGGCTTGAGAAATAGAACTCAAAAATAA MGTLLFSPSSSSSSSAYHSLKAHTLFLRRNGSRSFSDFPNLCSSFCTLNPPTGFPRKSAILAAKKTNKEDGHRSVPKPDESTGFFPEAVLLKEKKVAEDGQFLPEFADAEEEKLYEYLNLQLESETKVDQMRHYEVVFLIHEKNAEEVESVNEKVQGFLREKKGRIWRLSDWGMRRLAYKIKKAKYAHYILMNFELEAKWINEFKSMLDMDERVIRHLVIKRDAAITEDCPPPPEFHTLRAGVDDDDSEEDDMDDYDSEDEMDWDGEDELDDYGDEFEDGIIIVDSDNDDDDNKSKATKSAASNKGLRNRTQK
BLAST of Cla97C06G113840 vs. NCBI nr
Match: XP_023548157.1 (coiled-coil domain-containing protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 414.1 bits (1063), Expect = 4.3e-112 Identity = 216/247 (87.45%), Postives = 228/247 (92.31%), Query Frame = 0
BLAST of Cla97C06G113840 vs. NCBI nr
Match: XP_008458328.1 (PREDICTED: probable dual specificity protein phosphatase DDB_G0281963 [Cucumis melo] >XP_008458329.1 PREDICTED: probable dual specificity protein phosphatase DDB_G0281963 [Cucumis melo] >XP_008458330.1 PREDICTED: probable dual specificity protein phosphatase DDB_G0281963 [Cucumis melo]) HSP 1 Score: 411.4 bits (1056), Expect = 2.8e-111 Identity = 263/318 (82.70%), Postives = 274/318 (86.16%), Query Frame = 0
BLAST of Cla97C06G113840 vs. NCBI nr
Match: XP_023006618.1 (uncharacterized protein LOC111499293 isoform X2 [Cucurbita maxima]) HSP 1 Score: 410.2 bits (1053), Expect = 6.2e-111 Identity = 219/249 (87.95%), Postives = 227/249 (91.16%), Query Frame = 0
BLAST of Cla97C06G113840 vs. NCBI nr
Match: XP_023006617.1 (uncharacterized protein LOC111499293 isoform X1 [Cucurbita maxima]) HSP 1 Score: 410.2 bits (1053), Expect = 6.2e-111 Identity = 219/249 (87.95%), Postives = 227/249 (91.16%), Query Frame = 0
BLAST of Cla97C06G113840 vs. NCBI nr
Match: XP_022959140.1 (putative vacuolar protein sorting-associated protein 13F [Cucurbita moschata]) HSP 1 Score: 405.2 bits (1040), Expect = 2.0e-109 Identity = 215/247 (87.04%), Postives = 224/247 (90.69%), Query Frame = 0
BLAST of Cla97C06G113840 vs. TrEMBL
Match: tr|A0A1S3C7Q7|A0A1S3C7Q7_CUCME (probable dual specificity protein phosphatase DDB_G0281963 OS=Cucumis melo OX=3656 GN=LOC103497776 PE=3 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 1.8e-111 Identity = 263/318 (82.70%), Postives = 274/318 (86.16%), Query Frame = 0
BLAST of Cla97C06G113840 vs. TrEMBL
Match: tr|A0A0A0KD50|A0A0A0KD50_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G324870 PE=3 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.1e-108 Identity = 258/321 (80.37%), Postives = 270/321 (84.11%), Query Frame = 0
BLAST of Cla97C06G113840 vs. TrEMBL
Match: tr|A0A2C9WBW3|A0A2C9WBW3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G207700 PE=3 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 9.9e-81 Identity = 161/224 (71.88%), Postives = 180/224 (80.36%), Query Frame = 0
BLAST of Cla97C06G113840 vs. TrEMBL
Match: tr|A0A2I4GTM0|A0A2I4GTM0_9ROSI (glutamic acid-rich protein OS=Juglans regia OX=51240 GN=LOC109010786 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80 Identity = 168/224 (75.00%), Postives = 181/224 (80.80%), Query Frame = 0
BLAST of Cla97C06G113840 vs. TrEMBL
Match: tr|A0A061EP44|A0A061EP44_THECC (Translation elongation factor EF1B/ribosomal protein S6 family protein OS=Theobroma cacao OX=3641 GN=TCM_021419 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.2e-80 Identity = 155/200 (77.50%), Postives = 174/200 (87.00%), Query Frame = 0
BLAST of Cla97C06G113840 vs. Swiss-Prot
Match: sp|Q0VMF9|RS6_ALCBS (30S ribosomal protein S6 OS=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) OX=393595 GN=rpsF PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.9e-19 Identity = 46/101 (45.54%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Cla97C06G113840 vs. Swiss-Prot
Match: sp|Q7NRY7|RS6_CHRVO (30S ribosomal protein S6 OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) OX=243365 GN=rpsF PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.5e-18 Identity = 44/101 (43.56%), Postives = 68/101 (67.33%), Query Frame = 0
BLAST of Cla97C06G113840 vs. Swiss-Prot
Match: sp|Q31FW4|RS6_HYDCU (30S ribosomal protein S6 OS=Hydrogenovibrio crunogenus (strain XCL-2) OX=317025 GN=rpsF PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.2e-18 Identity = 45/98 (45.92%), Postives = 66/98 (67.35%), Query Frame = 0
BLAST of Cla97C06G113840 vs. Swiss-Prot
Match: sp|Q82XQ6|RS6_NITEU (30S ribosomal protein S6 OS=Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298) OX=228410 GN=rpsF PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.2e-18 Identity = 45/119 (37.82%), Postives = 71/119 (59.66%), Query Frame = 0
BLAST of Cla97C06G113840 vs. Swiss-Prot
Match: sp|C1DCR4|RS6_LARHH (30S ribosomal protein S6 OS=Laribacter hongkongensis (strain HLHK9) OX=557598 GN=rpsF PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 4.2e-18 Identity = 43/101 (42.57%), Postives = 66/101 (65.35%), Query Frame = 0
BLAST of Cla97C06G113840 vs. TAIR10
Match: AT3G17170.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein) HSP 1 Score: 261.9 bits (668), Expect = 5.0e-70 Identity = 121/166 (72.89%), Postives = 153/166 (92.17%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |