Csa5G648700 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa5G648700
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionrRNA biogenesis protein rrp36; contains IPR009292 (Protein of unknown function DUF947)
LocationChr5 : 27518410 .. 27522260 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTCTCCTTCGTTTTGATTTTAGGTTACACAGCTTGGTGGAGACTGATATCGGGGAGCCATTTATGAAACTCAGAATTCCTATTTCTTTCACTTCTCTCGGAATTCCGTTGATTTATGCCGCAGTAGAGTCCTCCGGATCAGTCTCGCCACTGTATTAGGCTAACAACTTCTCTTCCTCGCGCTGTGCGTTCCTTCTTCTCTGTTTCTCTTCCTCTGCTCCTCTTCTCACTTCTCACCTCAGTTTTGCGCCGTTCGTCTCCTCCTCGCCGTCTGTTTTCCTCATCTTCTCCTTCCGACTTCTGACGGCCATCCTAACAGGTATGAAATTATTTATTTATAGTTTTTGGTATAAATAAAATTTAAACTCCATTTTTTTCCCCTTCAAATAATGTTGTGGATTATTGTATGTTGTAGACTATTTTATGTTTTGGCTTTGTTGAGTTCAATATTGAAAGCAATGAATGGGTAAGGAGCTGCTACTAACATCACAGTAAGGGGCTGCTACTGACTTGTCTAAATCATAATGAATGGGTTATTGTTATGTGGGTTATTGCTGCTGTTTACACTTCAGCAATTCATTTTTAAGATTTCATTGTTGGTTGTCTTGCTGTTTACATTCTGTTGTTGTATGGGTGAAATTTTGTAAATTTGAATGTACAAAATTTTTGATTTTTTTTTTTTTTTTTGAAAAGGAACCATTTTGAACTTTACAAACATTAGAATGTAAAAGAAAAAAAAGGACAACTCAACCCATATTTTATGGGTTGGGTTAGAAACTTAATTCTGGTTATTTGGTTTGACCTGTTTACACCTCTAGGTTTGCTTTCGCCGCCCCGATTTGCCTTTGCCACCTCACTCCGGTCACCGTCGACCACGTCTCAACATAAAGACTATTTTGTTTAAATTGGTTTTACGATTTGTATATAACTTAGAATTTGTGTAACATCAATGCTATAGGGCCAATATTATCAAGCTTTGGATTGGAATGAAGAAATACAGTAGTTCTGTTCCTAGCTCTGGCAAACAGATCGTGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGATGAATCTCTTGACTCGGTATTTTTTCAGTTAAATTATATATGCTTGTGTTACATTTTTTGAAAGGAATTCTTTTATTTGTAAGTTGATGTTCACCGTATTGTATAGGAAGAGGAGAATATAGAGCGTGAGCTTGCAGATGTAACTTTTGAAGAGTTACAAAGGGCACGGTCTGATGGATCACATTCCATGTACCAAAAGACCAAACAAGAGAAGAAAAGTGGGCGGGCGAACAAGAACAGGTAGCTTGTGGGTACTAATTATTGTTTTTTGATTTATCTCTTACAACTTGGAAGTTGATGAAGTGCATGATTGTAATTTCTTTGTGAAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATGTGAGTTGTTTATTTCCTTTTCTGTTTGTTCATTATCCTAAAAGACACATCTCACTTTAATGGAGTTCTAGTGCAAGCTAAGAAATAGTTAAATCTCTCTCTCCACACTAACTGGAGCTTGGTTCATTGGTTATTTTTTGGTTTTCAGATGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGCTGATGGGTGAGTTTTTCTTGATCCAAGGTTTGAATGGTTTGATGAACTTTTTGACATGGTGGAATGAATGTTGTCATCTATCATAAAAAAATTTCTTCTTAAATTTTCATACAGGCTATTTACTTTATAATCATCTTACTTCTTTGTTTGAAATCGTAATGGTATGTTTGTATGTTTCTTTGAATCTTACAGATTTAAAAAGAGATATAGTTTCATATACGAGAAAACTCTTCCAGCTGAAAAAGAGGTCAATACTTCTCCTTTTCCTTGATATATCCCTCTAGTGATATCGTTTTTAATTTTATATTCTAAACCTAAATTCAGCTAACTTGGATGCATTTTGCATATTGAAACGTTTACTGGCACAACAGGAACTGAAAAAGCAGTTAAGGAAAACAAATGATCCAAATGTTGCTGAAGAACTAAAAAAGCAATTATCTTGGATTGTAAGTATAATTCTTTTGATTCATATATAATGAGTCTCATGTTCTCTAATGTAATGCCATAAAAAGAGATGTTTTATGGTCTGGAAGAAAAATGAGAATGAAGTTTGTACTTGGTGAGAATTAGGGAAAAAAAAAAAGCTCAAACTTATTTTATAGAATAAAGACAAAAACTTCTTACTTCTTTATCACCAAGTTTTGTTTGATCATAGTCTTATTATTTGTGTACACAGGTCCACTGTATGTTGATTTTTTATTGTTTTCATGTATTTTCAGGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCCTTCTATCTTAAGAAATGTAAAATTTCTCTTCCTCTCTTTTTGAATGACTCTTTCCCTCAAAGGTGTGCGCTTAGGGTATGGTCTAGATCTTCTGCTTGAAACTTTTAAACCTTGGGTGACCGATGGTAATTATTTTCTGATGGTAGTTATGCAAGCGGGGGACTTTTGAACATTGGACTTATGTGCTTGTGATTAGCACAAGACACTAGTATTTTAATTGGGATTTAATTTGATTACTCTGAGTTGCAGAACATTGGTCTCACGCTGGTATTAATTTGCTGTCTAAGAAAAAGAAAGAAAAAACCAGGCCTTAACATCAAGGGAAAGGGAAGTTTCTAGGGAAAAAGTATAATTACACATTTCAAACATGAAAACATGATTGGCATGCTCTTGGTTTTCAGTGATCATGGTAATCACGGGGATTCATTAGAAGAGTCATATTTGGTTTCTTGTTAGATTTTATGTTTCTACTTCAGCTTTGACGTAGGGAAGGTTAGGTGGGGGATCTCGTTAGCTGTGATTTTTTGGTGACAATTGGATTTGGGTAGTTGTGCTTCCAGATAGGAGAGAGTAATCTTTTTGGTATTTCCTGAATTCTGTAGCTCCTGTTGCAGGAGCTGTAGGACTCTGAACTCTTCGATTTCTATGAAATTACCTCCATGTCTTATTTTATTAGATTGGAGCTTCTTTTCATAGTTTGAGTCTCTTTGGTCTTCTATCGGCTCTAGTATTCTTTCATTTTATACCACAAAAATTCAACTATTCATTGAAAAACAATACTGATTTCTTAAAAGAGTTCATTTGGTCAATGGGAAAGCCCGTTAAATGTTAACAATTATGATTGTTTTTGTCTTCAGCTCTTTAAGATGCTTCACTTGGTAGTTTTGCCTTTGTAATAGCTGTTGACACTGTCTTTGGTATTGTTTCAGCTGAAATTCGAAAGCAAAGGCTTGTCGAAAAATACACCAATCTTAAGGTATAAATCTGCCATTTCTCACAACATAATTATATTTCAACACGGTCAGTTTAATGCTACTTATGCATCTGAATTTGCAATTAACCACTCTTGAGTTTGAACAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGAAAGAGGAGGAAGAATGCTGCAAAGGATCGTAGATACATACCATATCAAAGGTCTAGTAAGCTTGATGAGCAAGATTGAAGGAGGTTCATGTTCCATATGTTTTTAAATTTAACCTCACCCAAGATTTTACTTTTCATTTCTTAGGCTATTGCAGAAGCAGAATAGAAAAGAGATTATTTTTAATTTGTTATAATGTCATGTATTGCTTGATATGTAAATCTGATGCAAGATTCCAAAATATTTGAAAGAACTT

mRNA sequence

ATGAAGAAATACAGTAGTTCTGTTCCTAGCTCTGGCAAACAGATCGTGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGATGAATCTCTTGACTCGGAAGAGGAGAATATAGAGCGTGAGCTTGCAGATGTAACTTTTGAAGAGTTACAAAGGGCACGGTCTGATGGATCACATTCCATGTACCAAAAGACCAAACAAGAGAAGAAAAGTGGGCGGGCGAACAAGAACAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATATGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGCTGATGGATTTAAAAAGAGATATAGTTTCATATACGAGAAAACTCTTCCAGCTGAAAAAGAGGAACTGAAAAAGCAGTTAAGGAAAACAAATGATCCAAATGTTGCTGAAGAACTAAAAAAGCAATTATCTTGGATTGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTGTCGAAAAATACACCAATCTTAAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGAAAGAGGAGGAAGAATGCTGCAAAGGATCGTAGATACATACCATATCAAAGGTCTAGTAAGCTTGATGAGCAAGATTGA

Coding sequence (CDS)

ATGAAGAAATACAGTAGTTCTGTTCCTAGCTCTGGCAAACAGATCGTGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGATGAATCTCTTGACTCGGAAGAGGAGAATATAGAGCGTGAGCTTGCAGATGTAACTTTTGAAGAGTTACAAAGGGCACGGTCTGATGGATCACATTCCATGTACCAAAAGACCAAACAAGAGAAGAAAAGTGGGCGGGCGAACAAGAACAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATATGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGCTGATGGATTTAAAAAGAGATATAGTTTCATATACGAGAAAACTCTTCCAGCTGAAAAAGAGGAACTGAAAAAGCAGTTAAGGAAAACAAATGATCCAAATGTTGCTGAAGAACTAAAAAAGCAATTATCTTGGATTGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTGTCGAAAAATACACCAATCTTAAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGAAAGAGGAGGAAGAATGCTGCAAAGGATCGTAGATACATACCATATCAAAGGTCTAGTAAGCTTGATGAGCAAGATTGA

Protein sequence

MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIPYQRSSKLDEQD*
Homology
[Close]
BLAST of Csa5G648700 vs. Swiss-Prot
Match: RRP36_NEMVE (Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis GN=v1g245966 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.1e-36
Identity = 89/238 (37.39%), Postives = 137/238 (57.56%), Query Frame = 1 

Query: 19  ESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKT----KQEKKSG- 78
           +S D ES + D S + E E+++ EL+ + F ELQ  +       Y        +E+  G 
Sbjct: 7   DSSDDESPTDDCSDEGEVEHLKDELSQIPFCELQDLKDKIGSKKYNLAIHGIMEERTQGI 66

Query: 79  -----RANKNR-PMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFKKRYSFI 138
                +  KN+ P E+SS++ V + R+V+Q  K M RDPRF+ LSG  + D F+K YSF+
Sbjct: 67  PDLETKKKKNKGPQELSSKQRVPKLRKVVQVKKKMGRDPRFDDLSGKFNEDLFRKSYSFV 126

Query: 139 YEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKER 198
            +  +  EK+ ++K+L+KT +    + L   L  +++Q +S  +         K K+ ER
Sbjct: 127 NDIRVE-EKKSVEKELKKTKNAEKRKNLNDLLKVMNQQERSRKSAEAKRESKKKIKETER 186

Query: 199 EAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIPYQR 246
           E  + GKKPFYL+KSE++K  L EKY  LKS GKL  Y+ ++R+K A+KDRR++P +R
Sbjct: 187 ELVQKGKKPFYLRKSELKKLELAEKYKELKSKGKLQKYLTKRRKKTASKDRRHVPERR 243

[Close]
BLAST of Csa5G648700 vs. Swiss-Prot
Match: RRP36_SCLS1 (rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rrp36 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34
Identity = 93/268 (34.70%), Postives = 146/268 (54.48%), Query Frame = 1 

Query: 5   SSSVPSS-GKQIVEEE---SEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 64
           S S PS  G+   EEE   S++ E    +E+ +SEEE      A ++F  L +A++  S 
Sbjct: 32  SDSAPSEIGRDDNEEEESSSDETEDEVEEEASESEEETSNDAAASISFGALAKAQATMSK 91

Query: 65  SMYQKTKQEKKSG-----------------------RANKNRPMEVSSRKPVSRFREVIQ 124
              + +K+ KKS                        R++KN P E+SS+K VSR REV+ 
Sbjct: 92  PSKRDSKKSKKSNADGWEDNEATERKAGKKDQRDFTRSSKNAPTEISSKKAVSRRREVVP 151

Query: 125 APKNMVRDPRFESLSGTLDADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKK 184
             K  +RDPRF+   G +D    +K Y F+ +     E ++L+K ++KT D +  E+LK+
Sbjct: 152 VKKREIRDPRFDPTHGPVDMGKIEKVYDFLVDYR-EDEIKKLRKTIKKTKDEDEKEKLKR 211

Query: 185 QLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLK 244
            L  ++ + K+D+ KR    IL KH+K+E+E  K GK P+YLKK+E +K+ L++ Y  LK
Sbjct: 212 DLLSMESRKKTDAKKRKAREILDKHRKEEKELVKEGKTPYYLKKAEQKKRVLLDTYGELK 271

Query: 245 STGKLDAYVERKRRKNAAKDRRYIPYQR 246
              +LD  +ER+R+K   K+++ +P  R
Sbjct: 272 GR-QLDRVIERRRKKVEGKEKKNMPRAR 297

[Close]
BLAST of Csa5G648700 vs. Swiss-Prot
Match: RRP36_BOTFB (rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) GN=rrp36 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.6e-34
Identity = 92/267 (34.46%), Postives = 142/267 (53.18%), Query Frame = 1 

Query: 5   SSSVPS-SGKQIVE--EESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHS 64
           S S PS +GK   E    S++      DE L   EE      A ++F  L +A++  S  
Sbjct: 32  SDSAPSETGKNDAEGGSSSDEEVDDDDDEELSESEEEASNGAASISFGALAKAQATMSKP 91

Query: 65  MYQKTKQEKKSG-----------------------RANKNRPMEVSSRKPVSRFREVIQA 124
             + +K  KKS                        R++KN P EVSS+K VSR REV+  
Sbjct: 92  SKRDSKNLKKSNGDGWEDNEATERKAGKKDQRDFTRSSKNAPTEVSSKKAVSRRREVVPV 151

Query: 125 PKNMVRDPRFESLSGTLDADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQ 184
            K  +RDPRFE  +G +D    +K Y F+ +     E ++LK+ +RKT D +  E+LK++
Sbjct: 152 KKREIRDPRFEPTNGPVDMQKIEKNYDFLVDYR-EDEMKKLKETIRKTKDEDEKEKLKRE 211

Query: 185 LSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKS 244
           L  ++ + K+D+ KR    +L KH+K+E+E  K GK P+YLKK+E +K+ L++ +  LK 
Sbjct: 212 LLRMESRKKTDARKRKAREVLDKHRKEEKELVKEGKTPYYLKKAEQKKRVLLDTFGELKG 271

Query: 245 TGKLDAYVERKRRKNAAKDRRYIPYQR 246
             +LD  +ER+R+K   K+++ +P  R
Sbjct: 272 R-QLDRVIERRRKKVEGKEKKNMPRAR 296

[Close]
BLAST of Csa5G648700 vs. Swiss-Prot
Match: RRP36_NECH7 (rRNA biogenesis protein RRP36 OS=Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) GN=RRP36 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32
Identity = 86/258 (33.33%), Postives = 141/258 (54.65%), Query Frame = 1 

Query: 18  EESEDLESSSSDESLDSEEENIER----ELADVTFEELQRAR----SDGSHSMYQKT--- 77
           +E ED E S S+E  + E E  E+    +L+ ++F  L +A+    S    S   KT   
Sbjct: 52  DEDEDEEGSDSEEGSEEEPEPEEQTPKVDLSSISFGALAKAQATLPSTSRRSKSSKTATE 111

Query: 78  ----------------KQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFES 137
                           K + K  R++K+ P E +S+KPVSR RE++   +   RDPRF+ 
Sbjct: 112 SSRTETTPAPRKSTRSKDDPKPKRSSKHAPQEQTSKKPVSRRREILPDNRRQYRDPRFDP 171

Query: 138 LSGTLDADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDS 197
           L G +D +   K Y+F+ E     E  +L+ Q++KT D    E++K+QL  ++ + K+  
Sbjct: 172 LVGKVDEEKASKAYAFLDEYR-EKEMSDLRAQIKKTKDTYAKEDMKRQLQAMESRKKARK 231

Query: 198 TKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKR 249
            K  +  +L +H+KKE+E    GK PFYLK+SE +KQ LV++Y  + S G++D  +ERKR
Sbjct: 232 RKEEEENLLKEHRKKEKELVAQGKTPFYLKRSEQKKQILVKRYEGM-SKGQVDRAIERKR 291

[Close]
BLAST of Csa5G648700 vs. Swiss-Prot
Match: RRP36_SCHJY (rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rrp36 PE=3 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 5.3e-32
Identity = 82/253 (32.41%), Postives = 134/253 (52.96%), Query Frame = 1 

Query: 17  EEESEDLESSSSDESLDSEEENIERELADVTFEEL---QRARSDGSHSMYQKTKQEKKSG 76
           E ES D  +  S+E  D E  + +R+L  + F EL   QRA         QK   +    
Sbjct: 37  EVESTDEANDESEEKTDLE--STQRQLKSIPFSELLEAQRALKSEKVKFTQKNGAKLSKN 96

Query: 77  RA------------------NKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTL 136
           R                   +K+ P+E+SS++ V RFREV+  PK + RDPRF++LSG L
Sbjct: 97  RRRHESPSDSEDDDDDRNDRSKHAPVEMSSKRAVPRFREVVHVPKPLRRDPRFDTLSGNL 156

Query: 137 DADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVD 196
           + D  K  Y F+ E  L +E ++L+++L+   +    E +K+ L  +  + +        
Sbjct: 157 NVDKVKNNYGFVMEYRL-SEIKQLEQELKSCREQERRERIKEALKSLRSKLERRKEDERT 216

Query: 197 AAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAA 249
           A +L +H++ E+E  + GKKPFYLKKSE +K   ++KY +++ T  LD Y+E+K+++ A 
Sbjct: 217 ARVLKEHRQSEKEKIRQGKKPFYLKKSEQKKLLQLDKYKSMEGTKALDRYMEKKQKRRAQ 276

[Close]
BLAST of Csa5G648700 vs. TrEMBL
Match: A0A0A0KUS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648700 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 4.3e-137
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1 

Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
           SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF
Sbjct: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 241 IPYQRSSKLDEQD 254
           IPYQRSSKLDEQD
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]
BLAST of Csa5G648700 vs. TrEMBL
Match: A0A067FBL3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022953mg PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.1e-92
Identity = 165/251 (65.74%), Postives = 211/251 (84.06%), Query Frame = 1 

Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKK +++   S K   +EESE+   ++S  S + EEE IERELA++TFE+L +ARSDGSH
Sbjct: 1   MKKPNNATAGSSKTKFKEESEEDNKTTSVTSSE-EEEEIERELAEITFEDLLKARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
            +Y+K  QEKK+GRANKNRPMEVS++KPVSRFREV+QAPK +VRDPRFESL G LD +GF
Sbjct: 61  LVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           +KRY F++E TLPAEKEELKKQL+KTNDPN  ++LKK++SWIDKQ + +STK  DAAILA
Sbjct: 121 RKRYDFLFENTLPAEKEELKKQLKKTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           +HKKKEREAAKHGK+PFYLK SEIRKQRL+EKY  LK +GK+++++E++RRKNAAKD +Y
Sbjct: 181 EHKKKEREAAKHGKRPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKY 240

Query: 241 IPYQRSSKLDE 252
           +PY+R +  D+
Sbjct: 241 MPYRRPNNNDQ 250

[Close]
BLAST of Csa5G648700 vs. TrEMBL
Match: V4TK62_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021851mg PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.1e-92
Identity = 165/251 (65.74%), Postives = 211/251 (84.06%), Query Frame = 1 

Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKK +++   S K   +EESE+   ++S  S + EEE IERELA++TFE+L +ARSDGSH
Sbjct: 1   MKKPNNATAGSSKTKFKEESEEDNKTTSVTSSE-EEEEIERELAEITFEDLLKARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
            +Y+K  QEKK+GRANKNRPMEVS++KPVSRFREV+QAPK +VRDPRFESL G LD +GF
Sbjct: 61  LVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           +KRY F++E TLPAEKEELKKQL+KTNDPN  ++LKK++SWIDKQ + +STK  DAAILA
Sbjct: 121 RKRYDFLFENTLPAEKEELKKQLKKTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           +HKKKEREAAKHGK+PFYLK SEIRKQRL+EKY  LK +GK+++++E++RRKNAAKD +Y
Sbjct: 181 EHKKKEREAAKHGKRPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKY 240

Query: 241 IPYQRSSKLDE 252
           +PY+R +  D+
Sbjct: 241 MPYRRPNNNDQ 250

[Close]
BLAST of Csa5G648700 vs. TrEMBL
Match: A0A067JNE1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20662 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 7.4e-89
Identity = 162/253 (64.03%), Postives = 210/253 (83.00%), Query Frame = 1 

Query: 1   MKKYSSSV-PSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGS 60
           MKK + S+ PSS ++ VE E ED E  SS  S + +E  IERE+AD TFEELQ+ARS+GS
Sbjct: 1   MKKSNKSIAPSSSRRSVESE-EDAELLSSSSSSEEDESEIEREIADATFEELQKARSNGS 60

Query: 61  HSMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADG 120
            ++Y K KQ+KKSGRANKNRP+E S +KPVSRFREV+QAPK ++RDPRFESLSG LD +G
Sbjct: 61  VTVYSKPKQDKKSGRANKNRPVEASCKKPVSRFREVVQAPKKVIRDPRFESLSGNLDVEG 120

Query: 121 FKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAIL 180
           F+KRY+F++E  LPAEKEELKKQL K+NDP V ++LK ++SWIDKQ K +S K+ DA+IL
Sbjct: 121 FRKRYNFLFEDNLPAEKEELKKQLNKSNDPRVIDQLKNRISWIDKQLKFESKKQTDASIL 180

Query: 181 AKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRR 240
           A+HKKKEREAAK GK+PFYLKKSEIR QRL++++  LK +GKL++++E+KRRKNA+KD R
Sbjct: 181 AEHKKKEREAAKQGKQPFYLKKSEIRNQRLIKEFNKLKGSGKLESFIEKKRRKNASKDHR 240

Query: 241 YIPYQRSSKLDEQ 253
           ++PY+RSS  ++Q
Sbjct: 241 FMPYRRSSNSEQQ 252

[Close]
BLAST of Csa5G648700 vs. TrEMBL
Match: C6TDE9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G082900 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.8e-87
Identity = 160/249 (64.26%), Postives = 201/249 (80.72%), Query Frame = 1 

Query: 2   KKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHS 61
           +K    VP S +   EE  +D  SS+   S D EEE IE+ELADVTFEELQ+ARS+G+H+
Sbjct: 3   QKQRDRVPDSMETQYEESEKDESSSAYSSSEDEEEEEIEKELADVTFEELQKARSNGTHA 62

Query: 62  MYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFK 121
            +QK K++KK  RANKNRPME SS+KPVS FREVIQAPK +VRDPRFESL G LD +GF+
Sbjct: 63  FFQKPKEDKKLKRANKNRPMEASSKKPVSGFREVIQAPKKVVRDPRFESLCGKLDPEGFR 122

Query: 122 KRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAK 181
           KRY+F+YE  LPAE++ LKK+L+K  DP    E+++++SWIDKQ KSDS K +DA ILAK
Sbjct: 123 KRYNFLYENDLPAERQALKKELKKYKDPKRINEIEERVSWIDKQLKSDSAKHIDAEILAK 182

Query: 182 HKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYI 241
           HKKKEREA K GK+PFYLKKSEIRKQRL+EKY +LKS+GKL+A+VE++RR+NAAKD RY+
Sbjct: 183 HKKKEREATKQGKRPFYLKKSEIRKQRLIEKYNHLKSSGKLEAFVEKRRRRNAAKDHRYM 242

Query: 242 PYQRSSKLD 251
           PY+RS  ++
Sbjct: 243 PYRRSGDVE 251

[Close]
BLAST of Csa5G648700 vs. TAIR10
Match: AT1G12650.1 (AT1G12650.1 unknown protein)

HSP 1 Score: 271.6 bits (693), Expect = 5.1e-73
Identity = 136/242 (56.20%), Postives = 179/242 (73.97%), Query Frame = 1 

Query: 10  SSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQE 69
           SS K + E+  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K  Q 
Sbjct: 10  SSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWKPNQV 69

Query: 70  KKSGRA--NKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFKKRYSFI 129
           KK+GRA  NKNRPMEVSS+KPVSR+REV+  PK  VRDPRF  L GTLD +GF+KRY+F 
Sbjct: 70  KKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKRYNFF 129

Query: 130 YEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSD-STKRVDAAILAKHKKKE 189
           +E  LP E+EELKK+L+KT +P   +ELK QL++++K  K + ST+   AAIL +HKKKE
Sbjct: 130 FEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEHKKKE 189

Query: 190 REAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIPYQRS 249
           REAAK GK+P+YLKKSEIRKQ L+EKY +LK +GKL +Y++++R+KNA KD R++PY+R+
Sbjct: 190 REAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMPYRRA 248

[Close]
BLAST of Csa5G648700 vs. NCBI nr
Match: gi|449447559|ref|XP_004141535.1| (PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis sativus])

HSP 1 Score: 495.4 bits (1274), Expect = 6.1e-137
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1 

Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
           SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF
Sbjct: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 241 IPYQRSSKLDEQD 254
           IPYQRSSKLDEQD
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]
BLAST of Csa5G648700 vs. NCBI nr
Match: gi|659113574|ref|XP_008456647.1| (PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 1.7e-134
Identity = 248/253 (98.02%), Postives = 250/253 (98.81%), Query Frame = 1 

Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKKYSSSVPSSGKQI+EEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
           SMYQKTKQEKK GRANKNRPMEVSSRKPVSRFREVIQAPK+MVRDPRFESLSGTLD DGF
Sbjct: 61  SMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           KKRYSFIYEK LPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYEKNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 241 IPYQRSSKLDEQD 254
           IPYQRSSKLDEQD
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]
BLAST of Csa5G648700 vs. NCBI nr
Match: gi|568847136|ref|XP_006477395.1| (PREDICTED: rRNA biogenesis protein rrp36 isoform X1 [Citrus sinensis])

HSP 1 Score: 350.9 bits (899), Expect = 1.9e-93
Identity = 164/251 (65.34%), Postives = 212/251 (84.46%), Query Frame = 1 

Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKK +++   S K   EEESE+ E+ ++  +   EEE IERELA++TFE+L +ARSDGSH
Sbjct: 1   MKKPNNATAGSSKTKFEEESEEEENETTSVTSSEEEEEIERELAEITFEDLLKARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
            +Y+K  QEKK+GRANKNRPMEVS++KPVSRFREV+QAPK +VRDPRFESL G LD +GF
Sbjct: 61  LVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           +KRY F++E TLPAE+EELKKQL+KTNDPN  ++LKK++SWIDKQ + +STK  DAAIL+
Sbjct: 121 RKRYDFLFENTLPAEREELKKQLKKTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILS 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           +HKKKEREAAKHGK+PFYLKKSEIRKQRL+EKY  LK +GK+++++E++RRKNAAKD +Y
Sbjct: 181 EHKKKEREAAKHGKRPFYLKKSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKY 240

Query: 241 IPYQRSSKLDE 252
           +PY+R +  D+
Sbjct: 241 MPYRRPNNNDQ 251

[Close]
BLAST of Csa5G648700 vs. NCBI nr
Match: gi|567896106|ref|XP_006440541.1| (hypothetical protein CICLE_v10021851mg [Citrus clementina])

HSP 1 Score: 345.1 bits (884), Expect = 1.0e-91
Identity = 165/251 (65.74%), Postives = 211/251 (84.06%), Query Frame = 1 

Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKK +++   S K   +EESE+   ++S  S + EEE IERELA++TFE+L +ARSDGSH
Sbjct: 1   MKKPNNATAGSSKTKFKEESEEDNKTTSVTSSE-EEEEIERELAEITFEDLLKARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
            +Y+K  QEKK+GRANKNRPMEVS++KPVSRFREV+QAPK +VRDPRFESL G LD +GF
Sbjct: 61  LVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           +KRY F++E TLPAEKEELKKQL+KTNDPN  ++LKK++SWIDKQ + +STK  DAAILA
Sbjct: 121 RKRYDFLFENTLPAEKEELKKQLKKTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           +HKKKEREAAKHGK+PFYLK SEIRKQRL+EKY  LK +GK+++++E++RRKNAAKD +Y
Sbjct: 181 EHKKKEREAAKHGKRPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKY 240

Query: 241 IPYQRSSKLDE 252
           +PY+R +  D+
Sbjct: 241 MPYRRPNNNDQ 250

[Close]
BLAST of Csa5G648700 vs. NCBI nr
Match: gi|802741040|ref|XP_012087001.1| (PREDICTED: ribosomal RNA processing protein 36 homolog isoform X2 [Jatropha curcas])

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-88
Identity = 162/253 (64.03%), Postives = 210/253 (83.00%), Query Frame = 1 

Query: 1   MKKYSSSV-PSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGS 60
           MKK + S+ PSS ++ VE E ED E  SS  S + +E  IERE+AD TFEELQ+ARS+GS
Sbjct: 1   MKKSNKSIAPSSSRRSVESE-EDAELLSSSSSSEEDESEIEREIADATFEELQKARSNGS 60

Query: 61  HSMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADG 120
            ++Y K KQ+KKSGRANKNRP+E S +KPVSRFREV+QAPK ++RDPRFESLSG LD +G
Sbjct: 61  VTVYSKPKQDKKSGRANKNRPVEASCKKPVSRFREVVQAPKKVIRDPRFESLSGNLDVEG 120

Query: 121 FKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAIL 180
           F+KRY+F++E  LPAEKEELKKQL K+NDP V ++LK ++SWIDKQ K +S K+ DA+IL
Sbjct: 121 FRKRYNFLFEDNLPAEKEELKKQLNKSNDPRVIDQLKNRISWIDKQLKFESKKQTDASIL 180

Query: 181 AKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRR 240
           A+HKKKEREAAK GK+PFYLKKSEIR QRL++++  LK +GKL++++E+KRRKNA+KD R
Sbjct: 181 AEHKKKEREAAKQGKQPFYLKKSEIRNQRLIKEFNKLKGSGKLESFIEKKRRKNASKDHR 240

Query: 241 YIPYQRSSKLDEQ 253
           ++PY+RSS  ++Q
Sbjct: 241 FMPYRRSSNSEQQ 252

The following BLAST results are available for this feature:
BLAST of Csa5G648700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RRP36_NEMVE6.1e-3637.39Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis GN=v1g2459... [more]
RRP36_SCLS11.5e-3434.70rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1... [more]
RRP36_BOTFB2.6e-3434.46rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) GN=rrp36... [more]
RRP36_NECH71.1e-3233.33rRNA biogenesis protein RRP36 OS=Nectria haematococca (strain 77-13-4 / ATCC MYA... [more]
RRP36_SCHJY5.3e-3232.41rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / ... [more]
BLAST of Csa5G648700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUS3_CUCSA4.3e-137100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648700 PE=3 SV=1[more]
A0A067FBL3_CITSI7.1e-9265.74Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022953mg PE=3 SV=1[more]
V4TK62_9ROSI7.1e-9265.74Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021851mg PE=3 SV=1[more]
A0A067JNE1_JATCU7.4e-8964.03Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20662 PE=3 SV=1[more]
C6TDE9_SOYBN1.8e-8764.26Uncharacterized protein OS=Glycine max GN=GLYMA_07G082900 PE=2 SV=1[more]
BLAST of Csa5G648700 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12650.15.1e-7356.20 unknown protein[more]
BLAST of Csa5G648700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447559|ref|XP_004141535.1|6.1e-137100.00PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis sativus][more]
gi|659113574|ref|XP_008456647.1|1.7e-13498.02PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo][more]
gi|568847136|ref|XP_006477395.1|1.9e-9365.34PREDICTED: rRNA biogenesis protein rrp36 isoform X1 [Citrus sinensis][more]
gi|567896106|ref|XP_006440541.1|1.0e-9165.74hypothetical protein CICLE_v10021851mg [Citrus clementina][more]
gi|802741040|ref|XP_012087001.1|1.1e-8864.03PREDICTED: ribosomal RNA processing protein 36 homolog isoform X2 [Jatropha curc... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009292RRP36
Vocabulary: Biological Process
TermDefinition
GO:0000469cleavage involved in rRNA processing
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000469 cleavage involved in rRNA processing
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0051604 protein maturation
cellular_component GO:0005730 nucleolus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU101865cucumber EST collection version 3.0transcribed_cluster
CU111261cucumber EST collection version 3.0transcribed_cluster
CU153110cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa5G648700.1Csa5G648700.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU111261CU111261transcribed_cluster
CU153110CU153110transcribed_cluster
CU101865CU101865transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009292rRNA biogenesis protein RRP36PANTHERPTHR21738UNCHARACTERIZEDcoord: 17..249
score: 1.3
IPR009292rRNA biogenesis protein RRP36PFAMPF06102DUF947coord: 74..239
score: 7.0
NoneNo IPR availableunknownCoilCoilcoord: 199..219
scor
NoneNo IPR availablePANTHERPTHR21738:SF0RIBOSOMAL RNA PROCESSING PROTEIN 36 HOMOLOGcoord: 17..249
score: 1.3