Cla97C08G145140 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C08G145140
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	ribosomal RNA processing protein 36 homolog
Location	Cla97Chr08 : 1639046 .. 1642846 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTACATAGTTGGTCGTCTAAAGTAATCATTGGAGTGGTCATGCTTAGATGATCGTTGATAGAGTTGATCATTAGACGTGATATTCATTAGAGTTGTTAGAGGCGATTGTTGTAATTGATTGTCAGACTCAACCAAATAGAATTGAACTGAAAATTTGTTGTTTTACTGAAGACTCAGTTCAGTTTAAAATAATAAGGAAACTGAAAATTTCGGTTCGGTTTGATTTTAGATTCGAAAACCAAATGTAAATGAACCGAACCGTTATCATACATAGTTCCGGGTCATTGAAATTTTAGGTTTGCCTTTGCTGTCCTCCGATTTGCGTCTCAACGTCTCACAGTGACCGAGTCACCACCTCACTCGTCTTTTCTCTTCTCCTCGACGTCCTCGTCTCCGGCCACCGTCGACCCCGTCTCCCTCCGCCCCCTCGATTTCTCCTCAGTTCTCAAGAGTAGCGACTCACACCGTAAAGACTATTTTGTAAAATTGGTTTTACGATTCAGGGCCAATATTATCAATCTTGGGACTGGAATGAAGAAACATGGTAGTTCCGTTCCTAGCTCTGGCAAAAAAATCATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGTATTTATTACCAGTTAAATATATGCTTGTGTTACATTTTTTTTAAAAAGGAATTCTTTTATTTGCAAGTTCATGTTCACTGTATTGTATAGGAAGAGGAGAATATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAAAAAGAGAAGAAAGGTGGGCGAGCAAACAAGAACAGGTAGCTTGTGGGTATTGTTTTTGTTTTCTTGATTTGTCTTTTACAACTTGGAAGTTAATGGAGTACATGATTGTAAATTCTTTGTGAAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTTATTCAGGCTCCTAAAAATGTGAGTTGGGTTATTCGTTTTTTGTTTGTTTATTATCCAAATTTATGGCTTTTGCATTGACTGTATGGAGCCAAGTTTACTGAACTATGAGATTCATATCTCACTTTAATGGAGTTCAAATGCAACCTAAGAAATAGTTACATCTCATCTCCGCACTAATTGGAGCTTGTTTCATTGTTGATTGCCGGTTTTCAGGTGGTACGTGATCCACGTTTTGAATCTTTATCTGGTAATCTTGATGTTGATGGGTGAGTTTTTCTTGATACGAGGTTTGATTAACTCTTTGACGTGTTGAAAGGAATGGTGTCACCTAACATAAACAATTTTTGTTTTAAATCTTTATTCACGCTATTTACTTTACAATATCTTTCTTCTTTGTTTGAAATTGTAATGGCATGTTCTTATGTTTCTTTGAATCTTACAGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGTCTATATTTTCCTTGTCCTAGATCTATCCCCCTATTGTTATCGTTTTTCATTTTTAGATTCTAAACCTAAACTCACTAACCTGGATGCATTTTGTGAATTGAAACTATCACTGGTACAACAGGAATTGAAGAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAGAAACAATTATCTTGGATTGTAAGTATAATTCTTTTGATTATTTAACAAGTCTCATGTTCTTATTGTTTATTTATGTAATGCCATAAAAAGGGATGTTTTATGGTCCTTAATGCTAAAAATGGAAGAAAAATTAGAATGAAGTTTGTACTTGGTGAGAATTAGGGCAAAAAAAAAAGCTCAAACTTATTTTTTAGGTTAAAAACAAAAACTCCTTCATCATTACCAAGTTTTGTTTGATCATAATCTCTTATTATTTGTGCACGCTGGTTCCCTATATATAGATTTTAGATTGTTTTCATGTATTTCAGGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATGTAAAACTTCTCTTCCTCTCTTTTTGAATGAGTCTTTCCCTTAAAGGTGCGCACTTAGGTTATGGTCATCTGCTTGAAACTTTTGAACCTTGGGTGACCTATGGTAATTATTTTCTAATAGTAGTCATGCAAGCAGGGGGGGACCTTTGAACTTTGTACTTATGTGCTTGTGATTAACCCGTGATTAGCACAAGACATTAGTATTTTAGCTGGATCGAATTTGATAACTCTGAGTTGTAGAACATAGGTTTGGTGCTGGTATTAATTTGCTTTCTGGGGGGGGAGGGGGGGGGGGGGGGGGGGGAGAGAGAGAAAAGAAAAGAGGAAAAAACCAGGCCTGGACATCAAGGGAAAGGGAAGTTTCTGCAGTTTATTTCTGACATAAACACACTCCAAACATGGTTTAGAACACGTGATGTGAGATGTTTCATTGTGTTGTTATTTTTTGAAATATTGGGCACATTGGGTTTAGAATATGTGAGGGATATGGTTTTGTAGAAATGAGAAAATTATGAAAAGAAAGGATAGGTTTTCATAAAAATTGGAATTTGTATAAAGTAATAAAAGGCATAAAATTCCATAGAAATTATATTATAAAATGAAGGAGATTATGCAGATTTCACTTGATAAATCTTACTAGCTTGATGTGAAAAGATGTGAAAGTGATAAGTTTGGCTCTTTAGGACAACCCGCCTGACCCTACAACATTTTGGTGTCAAGAATCATCTTTGGTTGTCATTTATTTATTTATTTTTTTGTTTGAGTACAACAATTATGGGACGAGAGATTGAACTTTCGACCTTTTGAGAGGAAGACCATCTCAATTACCATTGATCTAAGCTCACTTTGGCACTTGGTTGTCATTGATTGTGCTAATCACGACGATTTATTAAAAGAGTCGTATCTGGTTTCTTGTTAGATTTTATGTTTCTATTTAAGCTTTAGTTTAGGAAAGAGAAGGAGGGACCGAGTGATATAAATATGCAAGGGTTGAGGGCCATAGGTGGGGGAATTCATAACTGTGATTTTGTGGTGACTGACCATTGGATTTGGATAATTATACTTTTTCCATAGGTGTGTTAGATTGGCTCTTAAGGCCATTTCAGGAGGATAGAGTATCTTTTTGGTATTTCCTGAATTGTAGCTGTTGTTGAGCATTGTGGAGAGGCGGGAGCTGCCAAAACTCCCTTGGCATTGCCAAAATAGTGAATACATAATTTGACTATCTTATATTGGCTTTATTTTTGTATGCTCTTGTATTATTTAATTTATCACCATGAAAGTAAAGTTATTCATAGAAACAAGGTAACAAATTCTTAAAAAGAATTATTTTGATTAATGGGAAAGCCCATTATATTTAGTGCTTTAAGTAAGATGCTTCACTTGGTGGTTTTACCTTTTTGTAATAGCTGGTGACACTGTCTTGTTTTTTTCAGCTGAAATTCGAAAGCAAAGGCTCGTCGAAAAATACACCAGTCTTAAGGTATGAATTTGTCATTTCTCAACATACTTGTATTTCAACATGGTCAGTTCAATGCTATTTATGCTTCTGAATTGGCAATTAACCATTGTGGAGTTTGAACAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGGAGGAGGAGGAAAAATGCTGCAAAAGATCGTAGATACATACCATATCAAAGATCTAGTAAGCTTGATGAGCAAGATTGA

mRNA sequence

ATGATCTACATAGTTGGTCGTCTAAAGTTTGCCTTTGCTGTCCTCCGATTTGCGTCTCAACGTCTCACAGTGACCGAGTCACCACCTCACTCGTCTTTTCTCTTCTCCTCGACGTCCTCGTCTCCGGCCACCGTCGACCCCGTCTCCCTCCGCCCCCTCGATTTCTCCTCAGTTCTCAAGAGTAGCGACTCACACCGTAAAGACTATTTTGTAAAATTGGTTTTACGATTCAGGGCCAATATTATCAATCTTGGGACTGGAATGAAGAAACATGGTAGTTCCGTTCCTAGCTCTGGCAAAAAAATCATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGAAGAGGAGAATATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAAAAAGAGAAGAAAGGTGGGCGAGCAAACAAGAACAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTTATTCAGGCTCCTAAAAATGTGGTACGTGATCCACGTTTTGAATCTTTATCTGGTAATCTTGATGTTGATGGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGAATTGAAGAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAGAAACAATTATCTTGGATTGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTCGTCGAAAAATACACCAGTCTTAAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGGAGGAGGAGGAAAAATGCTGCAAAAGATCGTAGATACATACCATATCAAAGATCTAGTAAGCTTGATGAGCAAGATTGA

Coding sequence (CDS)

ATGATCTACATAGTTGGTCGTCTAAAGTTTGCCTTTGCTGTCCTCCGATTTGCGTCTCAACGTCTCACAGTGACCGAGTCACCACCTCACTCGTCTTTTCTCTTCTCCTCGACGTCCTCGTCTCCGGCCACCGTCGACCCCGTCTCCCTCCGCCCCCTCGATTTCTCCTCAGTTCTCAAGAGTAGCGACTCACACCGTAAAGACTATTTTGTAAAATTGGTTTTACGATTCAGGGCCAATATTATCAATCTTGGGACTGGAATGAAGAAACATGGTAGTTCCGTTCCTAGCTCTGGCAAAAAAATCATGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGACGATTCTCTTGACTCGGAAGAGGAGAATATAGAGCGTGAACTTGCAGATGTAACTTTTGAAGAGTTACAGAGAGCACGGTCTGATGGATCACATTCGATGTACCAAAAGACCAAAAAAGAGAAGAAAGGTGGGCGAGCAAACAAGAACAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTTATTCAGGCTCCTAAAAATGTGGTACGTGATCCACGTTTTGAATCTTTATCTGGTAATCTTGATGTTGATGGATTTAAGAAGAGATATAGTTTCATATACGAGAATAATCTTCCGGCTGAAAAAGAGGAATTGAAGAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAGAAACAATTATCTTGGATTGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCGTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTCGTCGAAAAATACACCAGTCTTAAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGGAGGAGGAGGAAAAATGCTGCAAAAGATCGTAGATACATACCATATCAAAGATCTAGTAAGCTTGATGAGCAAGATTGA

Protein sequence

MIYIVGRLKFAFAVLRFASQRLTVTESPPHSSFLFSSTSSSPATVDPVSLRPLDFSSVLKSSDSHRKDYFVKLVLRFRANIINLGTGMKKHGSSVPSSGKKIMEEESEDLESSSSDDSLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSSKLDEQD

Homology

[Close]

BLAST of Cla97C08G145140 vs. NCBI nr
Match: XP_008456647.1 (PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902001.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902002.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo])

HSP 1 Score: 364.8 bits (935), Expect = 3.2e-97
Identity = 227/253 (89.72%), Postives = 233/253 (92.09%), Query Frame = 0


Query: 88  MKKHGSSVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELADVTFEELQRARSDGSH 147
           MKK+ SSVPSS             XXXXXXXXXXXXXXXX   ADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIMEEESEDLEXXXXXXXXXXXXXXXXXXXADVTFEELQRARSDGSH 60

Query: 148 SMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGF 207
           SMYQKTK+EKKGGRANKNRPMEVSSRKPVSRFREVIQAPK++VRDPRFESLSG LDVDGF
Sbjct: 61  SMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGF 120

Query: 208 KKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA 267
           KKRYSFIYE NLPAEKEELKKQLRKTN XXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYEKNLPAEKEELKKQLRKTNXXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA 180

Query: 268 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRY 327
           KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYT+LKSTGKLDAYVER+RRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 328 IPYQRSSKLDEQD 341
           IPYQRSSKLDEQD
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]

BLAST of Cla97C08G145140 vs. NCBI nr
Match: XP_004141535.1 (PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis sativus] >KGN52649.1 hypothetical protein Csa_5G648700 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 2.3e-95
Identity = 212/253 (83.79%), Postives = 217/253 (85.77%), Query Frame = 0


Query: 88  MKKHGSSVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELADVTFEELQRARSDGSH 147
           MKK+ SSVPSS              XXXXXXXXXXXXXXX     VTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIVEEESEDLESXXXXXXXXXXXXXXXXXXXXVTFEELQRARSDGSH 60

Query: 148 SMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGF 207
           SMYQKTK+EKK GRANKNRPMEVSSRKPVSRFREVIQAPKN+VRDPRFESLSG LD DGF
Sbjct: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120

Query: 208 KKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA 267
           KKRYSFIYE  LPAEKEELKKQLRKTND           SWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 268 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRY 327
           KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYT+LKSTGKLDAYVER+RRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 328 IPYQRSSKLDEQD 341
           IPYQRSSKLDEQD
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]

BLAST of Cla97C08G145140 vs. NCBI nr
Match: XP_022973531.1 (ribosomal RNA processing protein 36 homolog [Cucurbita maxima])

HSP 1 Score: 357.5 bits (916), Expect = 5.2e-95
Identity = 207/253 (81.82%), Postives = 217/253 (85.77%), Query Frame = 0


Query: 88  MKKHGSSVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELADVTFEELQRARSDGSH 147
           MKKH +SVPSS                XXXXXXXXXXXXXRELADVTFEELQR RSDGSH
Sbjct: 1   MKKHCNSVPSSSKQMMEDEREDLEYSSXXXXXXXXXXXXXRELADVTFEELQRVRSDGSH 60

Query: 148 SMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGF 207
           SMYQKT +EKKG RANKNRPMEVSS+KPV RFREVIQAPKN+VRDPRFESL+G+LDV+GF
Sbjct: 61  SMYQKTNQEKKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGF 120

Query: 208 KKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA 267
           KKRYSFIYENNLPAEKEELKKQLRKTND           SWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYENNLPAEKEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 268 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRY 327
            HKKKEREAAKHGKKPFYLKKSEIRKQRL EKY +LKSTGKLDAY+ERRRRKNAAKDRRY
Sbjct: 181 NHKKKEREAAKHGKKPFYLKKSEIRKQRLTEKYNALKSTGKLDAYMERRRRKNAAKDRRY 240

Query: 328 IPYQRSSKLDEQD 341
           IPYQRSSK DEQ+
Sbjct: 241 IPYQRSSKSDEQE 253

[Close]

BLAST of Cla97C08G145140 vs. NCBI nr
Match: XP_023535518.1 (ribosomal RNA processing protein 36 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 356.7 bits (914), Expect = 8.8e-95
Identity = 207/253 (81.82%), Postives = 217/253 (85.77%), Query Frame = 0


Query: 88  MKKHGSSVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELADVTFEELQRARSDGSH 147
           MKKH SSVPSS                XXXXXXXXXXXXXRELADVTFEELQR RSDGSH
Sbjct: 1   MKKHCSSVPSSSKQMMEDEREDLEYSSXXXXXXXXXXXXXRELADVTFEELQRVRSDGSH 60

Query: 148 SMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGF 207
           SMYQKT +EKKG RANKNRPMEVSS+KPV RFREVIQAPK++VRDPRFESL+G+LDV+GF
Sbjct: 61  SMYQKTNQEKKGRRANKNRPMEVSSKKPVGRFREVIQAPKSMVRDPRFESLTGSLDVEGF 120

Query: 208 KKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA 267
           KKRYSFIYENNLPAEKEELKKQLRKTND           SWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYENNLPAEKEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 268 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRY 327
            HKKKEREAAKHGKKPFYLKKSEIRKQRL EKY +LKSTGKLDAY+ERRRRKNAAKDRRY
Sbjct: 181 NHKKKEREAAKHGKKPFYLKKSEIRKQRLTEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 240

Query: 328 IPYQRSSKLDEQD 341
           IPYQRSSK DEQ+
Sbjct: 241 IPYQRSSKSDEQE 253

[Close]

BLAST of Cla97C08G145140 vs. NCBI nr
Match: XP_022925402.1 (ribosomal RNA processing protein 36 homolog [Cucurbita moschata])

HSP 1 Score: 354.8 bits (909), Expect = 3.4e-94
Identity = 206/253 (81.42%), Postives = 216/253 (85.38%), Query Frame = 0


Query: 88  MKKHGSSVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELADVTFEELQRARSDGSH 147
           MKKH SSVPSS                XXXXXXXXXXXXXRELADVTFEELQR RSDGSH
Sbjct: 1   MKKHCSSVPSSSKQMMEDEREDLEYSSXXXXXXXXXXXXXRELADVTFEELQRVRSDGSH 60

Query: 148 SMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGF 207
           SMYQKT +EKKG RANKNRPMEVSS+KPV RFREVIQAPKN+VRDPRFESL+G+LDV+GF
Sbjct: 61  SMYQKTNQEKKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGF 120

Query: 208 KKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA 267
           KKRYSFIYENNLPAEKEELKKQLRK +D           SWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYENNLPAEKEELKKQLRKASDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 268 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRY 327
            HKKKEREAAKHGKKPFYLKKSEIRKQRL EKY +LKSTGKLDAY+ERRRRKNAAKDRRY
Sbjct: 181 NHKKKEREAAKHGKKPFYLKKSEIRKQRLTEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 240

Query: 328 IPYQRSSKLDEQD 341
           IPYQRSSK DEQ+
Sbjct: 241 IPYQRSSKSDEQE 253

[Close]

BLAST of Cla97C08G145140 vs. TrEMBL
Match: tr|A0A1S3C3C0|A0A1S3C3C0_CUCME (ribosomal RNA processing protein 36 homolog OS=Cucumis melo OX=3656 GN=LOC103496541 PE=3 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 227/253 (89.72%), Postives = 233/253 (92.09%), Query Frame = 0


Query: 88  MKKHGSSVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELADVTFEELQRARSDGSH 147
           MKK+ SSVPSS             XXXXXXXXXXXXXXXX   ADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIMEEESEDLEXXXXXXXXXXXXXXXXXXXADVTFEELQRARSDGSH 60

Query: 148 SMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGF 207
           SMYQKTK+EKKGGRANKNRPMEVSSRKPVSRFREVIQAPK++VRDPRFESLSG LDVDGF
Sbjct: 61  SMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGF 120

Query: 208 KKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA 267
           KKRYSFIYE NLPAEKEELKKQLRKTN XXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYEKNLPAEKEELKKQLRKTNXXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA 180

Query: 268 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRY 327
           KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYT+LKSTGKLDAYVER+RRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 328 IPYQRSSKLDEQD 341
           IPYQRSSKLDEQD
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]

BLAST of Cla97C08G145140 vs. TrEMBL
Match: tr|A0A0A0KUS3|A0A0A0KUS3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G648700 PE=3 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.5e-95
Identity = 212/253 (83.79%), Postives = 217/253 (85.77%), Query Frame = 0


Query: 88  MKKHGSSVPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRELADVTFEELQRARSDGSH 147
           MKK+ SSVPSS              XXXXXXXXXXXXXXX     VTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIVEEESEDLESXXXXXXXXXXXXXXXXXXXXVTFEELQRARSDGSH 60

Query: 148 SMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGF 207
           SMYQKTK+EKK GRANKNRPMEVSSRKPVSRFREVIQAPKN+VRDPRFESLSG LD DGF
Sbjct: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120

Query: 208 KKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILA 267
           KKRYSFIYE  LPAEKEELKKQLRKTND           SWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 268 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRY 327
           KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYT+LKSTGKLDAYVER+RRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 328 IPYQRSSKLDEQD 341
           IPYQRSSKLDEQD
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]

BLAST of Cla97C08G145140 vs. TrEMBL
Match: tr|V4TK62|V4TK62_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021851mg PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.6e-76
Identity = 147/211 (69.67%), Postives = 179/211 (84.83%), Query Frame = 0


Query: 128 RELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK 187
           RELA++TFE+L +ARSDGSH +Y+K  +EKK GRANKNRPMEVS++KPVSRFREV+QAPK
Sbjct: 40  RELAEITFEDLLKARSDGSHLVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPK 99

Query: 188 NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXS 247
            VVRDPRFESL GNLDV+GF+KRY F++EN LPAEKEELKKQL+KTND           S
Sbjct: 100 RVVRDPRFESLCGNLDVEGFRKRYDFLFENTLPAEKEELKKQLKKTNDPNAVDKLKKRIS 159

Query: 248 WIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTG 307
           WIDKQ + +STK  DAAILA+HKKKEREAAKHGK+PFYLK SEIRKQRL+EKY  LK +G
Sbjct: 160 WIDKQLRFESTKSTDAAILAEHKKKEREAAKHGKRPFYLKNSEIRKQRLIEKYNKLKGSG 219

Query: 308 KLDAYVERRRRKNAAKDRRYIPYQRSSKLDE 339
           K+++++E+RRRKNAAKD +Y+PY+R +  D+
Sbjct: 220 KVESFIEKRRRKNAAKDHKYMPYRRPNNNDQ 250

[Close]

BLAST of Cla97C08G145140 vs. TrEMBL
Match: tr|A0A067FBL3|A0A067FBL3_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022953mg PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 3.6e-76
Identity = 147/211 (69.67%), Postives = 179/211 (84.83%), Query Frame = 0


Query: 128 RELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK 187
           RELA++TFE+L +ARSDGSH +Y+K  +EKK GRANKNRPMEVS++KPVSRFREV+QAPK
Sbjct: 40  RELAEITFEDLLKARSDGSHLVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPK 99

Query: 188 NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXS 247
            VVRDPRFESL GNLDV+GF+KRY F++EN LPAEKEELKKQL+KTND           S
Sbjct: 100 RVVRDPRFESLCGNLDVEGFRKRYDFLFENTLPAEKEELKKQLKKTNDPNAVDKLKKRIS 159

Query: 248 WIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTG 307
           WIDKQ + +STK  DAAILA+HKKKEREAAKHGK+PFYLK SEIRKQRL+EKY  LK +G
Sbjct: 160 WIDKQLRFESTKSTDAAILAEHKKKEREAAKHGKRPFYLKNSEIRKQRLIEKYNKLKGSG 219

Query: 308 KLDAYVERRRRKNAAKDRRYIPYQRSSKLDE 339
           K+++++E+RRRKNAAKD +Y+PY+R +  D+
Sbjct: 220 KVESFIEKRRRKNAAKDHKYMPYRRPNNNDQ 250

[Close]

BLAST of Cla97C08G145140 vs. TrEMBL
Match: tr|A0A251LNZ0|A0A251LNZ0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G066700 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.9e-76
Identity = 145/212 (68.40%), Postives = 182/212 (85.85%), Query Frame = 0


Query: 128 RELADVTFEELQRARSDGSHSMYQKTKKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPK 187
           RE+AD TFEELQ+ARSDGS S+YQK K++KK GRANKNRPME S +KPVSRFREV+QAPK
Sbjct: 39  REIADATFEELQKARSDGSCSVYQKPKQDKKSGRANKNRPMEASCKKPVSRFREVVQAPK 98

Query: 188 NVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXS 247
            VVRDPRFESL GNLDVDGF+KRY+F++ENNLP+E+EELKKQ++K+ND           S
Sbjct: 99  KVVRDPRFESLCGNLDVDGFRKRYNFLFENNLPSEREELKKQMKKSNDPKVIDQLKKRIS 158

Query: 248 WIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTG 307
           WID+Q K +S K +DA ILA+HKKKEREAAK GK+PFY+KKSEIRK RL+++Y+ LK +G
Sbjct: 159 WIDRQLKFESAKHIDAEILAEHKKKEREAAKQGKRPFYMKKSEIRKHRLIKEYSKLKESG 218

Query: 308 KLDAYVERRRRKNAAKDRRYIPYQRSSKLDEQ 340
           KL++++E+RRRKNA+KDRRY+PY+RSS  +E+
Sbjct: 219 KLESFIEKRRRKNASKDRRYMPYRRSSNTEEE 250

[Close]

BLAST of Cla97C08G145140 vs. Swiss-Prot
Match: sp|B6K8A0|RRP36_SCHJY (rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=rrp36 PE=3 SV=2)

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-22
Identity = 61/173 (35.26%), Postives = 104/173 (60.12%), Query Frame = 0


Query: 163 NKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAE 222
           +K+ P+E+SS++ V RFREV+  PK + RDPRF++LSGNL+VD  K  Y F+ E  L +E
Sbjct: 115 SKHAPVEMSSKRAVPRFREVVHVPKPLRRDPRFDTLSGNLNVDKVKNNYGFVMEYRL-SE 174

Query: 223 KEELKKQLRKTNDXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKK 282
            ++L+++L+   +             +  +             L +H++ E+E  + GKK
Sbjct: 175 IKQLEQELKSCREQERRERIKEALKSLRSKXXXXXXXXXXXXXLKEHRQSEKEKIRQGKK 234

Query: 283 PFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQRSSK 336
           PFYLKKSE +K   ++KY S++ T  LD Y+E+++++ A K+++ +P  R  +
Sbjct: 235 PFYLKKSEQKKLLQLDKYKSMEGTKALDRYMEKKQKRRAQKEKKRLPRARPDR 286

[Close]

BLAST of Cla97C08G145140 vs. Swiss-Prot
Match: sp|A6RKG5|RRP36_BOTFB (rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=rrp36 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 3.2e-19
Identity = 75/179 (41.90%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 154 KKEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSF 213
           K ++   R++KN P EVSS+K VSR REV+   K  +RDPRFE  +G +D+   +K Y F
Sbjct: 120 KDQRDFTRSSKNAPTEVSSKKAVSRRREVVPVKKREIRDPRFEPTNGPVDMQKIEKNYDF 179

Query: 214 IYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILAKHKKKE 273
           + +     E ++LK+ +RKT DXXXXXXXXXXX                  +L KH+K+E
Sbjct: 180 LVDYR-EDEMKKLKETIRKTKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLDKHRKEE 239

Query: 274 REAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQR 333
           +E  K GK P+YLKK+E +K+ L++ +  LK   +LD  +ERRR+K   K+++ +P  R
Sbjct: 240 KELVKEGKTPYYLKKAEQKKRVLLDTFGELKGR-QLDRVIERRRKKVEGKEKKNMPRAR 296

[Close]

BLAST of Cla97C08G145140 vs. Swiss-Prot
Match: sp|A6QNR1|RRP36_BOVIN (Ribosomal RNA processing protein 36 homolog OS=Bos taurus OX=9913 GN=RRP36 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.9e-17
Identity = 68/216 (31.48%), Postives = 111/216 (51.39%), Query Frame = 0


Query: 129 ELADVTFEELQRARSDGSHSMYQK------TKKE------KKGGRANKNRPMEVSSRKPV 188
           + + ++FEEL   +S      Y++      TKK+      +KG  A+K+RP+E+S++  V
Sbjct: 31  DTSHMSFEELLELQSQVGTKAYKQLVTGSSTKKQSSRPPVQKGCVADKHRPLEMSAKVRV 90

Query: 189 SRFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDX 248
              R+V+   K V RDPRF+ LSG  + + F K Y F+ ++    EKE +KKQL+K    
Sbjct: 91  PFLRQVVPISKKVARDPRFDDLSGEYNPEVFDKTYQFL-DDIRAREKELVKKQLKKHRSG 150

Query: 249 XXXXXXXXXXSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRL 308
                       ++                          A+ G +P++LKKSE R+  L
Sbjct: 151 EEHEKLQHLLQRMEXXXXXXXXXXXXXXXXXXXXXXXXXXAQQGHRPYFLKKSEQRQLVL 210

Query: 309 VEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQR 333
            EK+  LK + KL++++ R+RR+NA KDRR++P  +
Sbjct: 211 AEKFKELKRSKKLESFLSRKRRRNAGKDRRHLPLSK 245

[Close]

BLAST of Cla97C08G145140 vs. Swiss-Prot
Match: sp|Q96EU6|RRP36_HUMAN (Ribosomal RNA processing protein 36 homolog OS=Homo sapiens OX=9606 GN=RRP36 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.8e-14
Identity = 71/218 (32.57%), Postives = 110/218 (50.46%), Query Frame = 0


Query: 128 RELADVTFEELQRARSDGSHSMYQK----TKKEKKGGR--------ANKNRPMEVSSRKP 187
           R  ++++FEEL   +S      Y++       +K+  R        A+K+RP+E+S++  
Sbjct: 43  RGTSNMSFEELLELQSQVGTKTYKQLVAGNSPKKQASRPPIQNACVADKHRPLEMSAKIR 102

Query: 188 VSRFREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPA-EKEELKKQLRKTN 247
           V   R+V+   K V RDPRF+ LSG  + + F K Y F+  N++ A EKE +KKQL+K  
Sbjct: 103 VPFLRQVVPISKKVARDPRFDDLSGEYNPEVFDKTYQFL--NDIRAKEKELVKKQLKKHL 162

Query: 248 DXXXXXXXXXXXSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQ 307
                   XXXX                                 G +P++LKKSE R+ 
Sbjct: 163 SGEEHEKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHRPYFLKKSEQRQL 222

Query: 308 RLVEKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQR 333
            L EK+  LK + KL+ ++ R+RR+NA KDRR++P  +
Sbjct: 223 ALAEKFKELKRSKKLENFLSRKRRRNAGKDRRHLPLSK 258

[Close]

BLAST of Cla97C08G145140 vs. Swiss-Prot
Match: sp|Q3UFY0|RRP36_MOUSE (Ribosomal RNA processing protein 36 homolog OS=Mus musculus OX=10090 GN=Rrp36 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 6.8e-14
Identity = 73/215 (33.95%), Postives = 111/215 (51.63%), Query Frame = 0


Query: 132 DVTFEELQRARSDGSHSMYQKTKKEKKGGR-------------ANKNRPMEVSSRKPVSR 191
           DV+FEEL R +  G      K  K+   G              A+K+RP+E+S++  V  
Sbjct: 35  DVSFEELLRLQGQGR----PKAHKQLVAGNSTRTRSPQQPVCVADKHRPLEMSAKVRVPF 94

Query: 192 FREVIQAPKNVVRDPRFESLSGNLDVDGFKKRYSFIYENNLPA-EKEELKKQLRKTNDXX 251
            R+V+   K V RDPRF+ LSG+ + + F K Y F+  N++ A EK+ +KKQL++     
Sbjct: 95  LRQVVPISKKVARDPRFDDLSGDYNPEVFDKTYQFL--NDIRAKEKQLVKKQLKRHRSGE 154

Query: 252 XXXXXXXXXSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLV 311
            XXXXXXXX                                   +P++LKKSE R+  L 
Sbjct: 155 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPYFLKKSEQRQLALA 214

Query: 312 EKYTSLKSTGKLDAYVERRRRKNAAKDRRYIPYQR 333
           EK+  L+ + KL++++ R+RR+NA KDRR++P  +
Sbjct: 215 EKFKELRRSKKLESFLSRKRRRNAGKDRRHLPLSK 243

[Close]

BLAST of Cla97C08G145140 vs. TAIR10
Match: AT1G12650.1 (unknown protein)

HSP 1 Score: 219.9 bits (559), Expect = 2.3e-57
Identity = 116/206 (56.31%), Postives = 156/206 (75.73%), Query Frame = 0


Query: 133 VTFEELQRARSDGSHSMYQKTKKEKKGG--RANKNRPMEVSSRKPVSRFREVIQAPKNVV 192
           +TFEE+ + R+DGS ++  K  + KK G  RANKNRPMEVSS+KPVSR+REV+  PK  V
Sbjct: 43  LTFEEIHKLRADGSKAVPWKPNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEV 102

Query: 193 RDPRFESLSGNLDVDGFKKRYSFIYENNLPAEKEELKKQLRKTNDXXXXXXXXXXXSWID 252
           RDPRF  L G LDV+GF+KRY+F +E+ LP E+EELKK+L+KT +           ++++
Sbjct: 103 RDPRFNQLGGTLDVEGFRKRYNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVE 162

Query: 253 KQFKSD-STKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTSLKSTGKL 312
           K  K + ST+   AAIL +HKKKEREAAK GK+P+YLKKSEIRKQ L+EKY SLK +GKL
Sbjct: 163 KMLKYEPSTQNKGAAILTEHKKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKL 222

Query: 313 DAYVERRRRKNAAKDRRYIPYQRSSK 336
            +Y+++RR+KNA KD R++PY+R+ +
Sbjct: 223 TSYLDKRRKKNATKDHRFMPYRRAEE 248

The following BLAST results are available for this feature:

BLAST of Cla97C08G145140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456647.1	3.2e-97	89.72	PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902...	[more]
XP_004141535.1	2.3e-95	83.79	PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis sativus] >KGN526...	[more]
XP_022973531.1	5.2e-95	81.82	ribosomal RNA processing protein 36 homolog [Cucurbita maxima]	[more]
XP_023535518.1	8.8e-95	81.82	ribosomal RNA processing protein 36 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022925402.1	3.4e-94	81.42	ribosomal RNA processing protein 36 homolog [Cucurbita moschata]	[more]

BLAST of Cla97C08G145140 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C3C0\|A0A1S3C3C0_CUCME	2.1e-97	89.72	ribosomal RNA processing protein 36 homolog OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|A0A0A0KUS3\|A0A0A0KUS3_CUCSA	1.5e-95	83.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G648700 PE=3 SV=1	[more]
tr\|V4TK62\|V4TK62_9ROSI	3.6e-76	69.67	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10021851mg PE=3 ...	[more]
tr\|A0A067FBL3\|A0A067FBL3_CITSI	3.6e-76	69.67	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g022953mg PE=3 SV=1	[more]
tr\|A0A251LNZ0\|A0A251LNZ0_MANES	7.9e-76	68.40	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G066700 PE=3 SV=...	[more]

BLAST of Cla97C08G145140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B6K8A0\|RRP36_SCHJY	1.4e-22	35.26	rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / ...	[more]
sp\|A6RKG5\|RRP36_BOTFB	3.2e-19	41.90	rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) OX=33264...	[more]
sp\|A6QNR1\|RRP36_BOVIN	3.9e-17	31.48	Ribosomal RNA processing protein 36 homolog OS=Bos taurus OX=9913 GN=RRP36 PE=2 ...	[more]
sp\|Q96EU6\|RRP36_HUMAN	1.8e-14	32.57	Ribosomal RNA processing protein 36 homolog OS=Homo sapiens OX=9606 GN=RRP36 PE=...	[more]
sp\|Q3UFY0\|RRP36_MOUSE	6.8e-14	33.95	Ribosomal RNA processing protein 36 homolog OS=Mus musculus OX=10090 GN=Rrp36 PE...	[more]

BLAST of Cla97C08G145140 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12650.1	2.3e-57	56.31	unknown protein	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0000469	cleavage involved in rRNA processing

Vocabulary: **INTERPRO**
Term	Definition
IPR009292	RRP36

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006364	rRNA processing
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0051604	protein maturation
biological_process	GO:1900864	mitochondrial RNA modification
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0030686	90S preribosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C08G145140.1	Cla97C08G145140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009292	rRNA biogenesis protein RRP36	PFAM	PF06102	RRP36	coord: 161..326 e-value: 4.3E-50 score: 169.8
IPR009292	rRNA biogenesis protein RRP36	PANTHER	PTHR21738	UNCHARACTERIZED	coord: 101..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..340

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C08G145140	Cla012480	Watermelon (97103) v1	wmwmbB101
Cla97C08G145140	Csa5G648700	Cucumber (Chinese Long) v2	cuwmbB405
Cla97C08G145140	ClCG08G000800	Watermelon (Charleston Gray)	wcgwmbB336
Cla97C08G145140	Cucsa.237340	Cucumber (Gy14) v1	cgywmbB420
Cla97C08G145140	CsGy5G030120	Cucumber (Gy14) v2	cgybwmbB387
Cla97C08G145140	CsaV3_5G039810	Cucumber (Chinese Long) v3	cucwmbB422
Cla97C08G145140	Bhi06G000184	Wax gourd	wgowmbB148

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C08G145140	Cucumber (Gy14) v2	cgybwmbB385
Cla97C08G145140	Cucumber (Gy14) v1	cgywmbB419
Cla97C08G145140	Cucurbita maxima (Rimu)	cmawmbB036
Cla97C08G145140	Cucurbita maxima (Rimu)	cmawmbB500
Cla97C08G145140	Cucurbita moschata (Rifu)	cmowmbB028
Cla97C08G145140	Cucurbita moschata (Rifu)	cmowmbB482
Cla97C08G145140	Wild cucumber (PI 183967)	cpiwmbB424
Cla97C08G145140	Wild cucumber (PI 183967)	cpiwmbB426
Cla97C08G145140	Cucumber (Chinese Long) v3	cucwmbB420
Cla97C08G145140	Cucumber (Chinese Long) v2	cuwmbB403
Cla97C08G145140	Bottle gourd (USVL1VR-Ls)	lsiwmbB445
Cla97C08G145140	Bottle gourd (USVL1VR-Ls)	lsiwmbB446
Cla97C08G145140	Melon (DHL92) v3.6.1	medwmbB032
Cla97C08G145140	Melon (DHL92) v3.6.1	medwmbB033
Cla97C08G145140	Melon (DHL92) v3.5.1	mewmbB036
Cla97C08G145140	Melon (DHL92) v3.5.1	mewmbB037