Cucsa.237340 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.237340
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ribosomal RNA processing protein 36 like
Location	scaffold02023 : 285071 .. 288806 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGGGGAGCCATTTATGAAACTCAGAATTCCTATTTCTTTCACTTCTCTCGGAATTCCGTTGATTTATGCCGCAGTAGAGTCCTCCGGATCAGTCTCGCCACTGTATTAGGCTAACAACTTCTCTTCCTCGCGCTGTGCGTTCCTTCTTCTCTGTTTCTCTTCCTCTGCTCCTCTTCTCACTTCTCACCTCAGTTTTGCGCCGTTCGTCTCCTCCTCGCCGTCTGTTTTCCTCATCTTCTCCTTCCGACTTCTGACGGCCATCCTAACAGGTATGAAATTATTTATTTATAGTTTTTGGTATAAATAAAATTTAAACTCCATTTTTTTCCCCTTCAAATAATGTTGTGGATTATTGTATGTTGTAGACTATTTTATGTTTTGGCTTTGTTGAGTTCAATATTGAAAGCAATGAATGGGTAAGGAGCTGCTACTAACATCACAGTAAGGGGCTGCTACTGACTTGTCTAAATCATAATGAATGGGTTATTGTTATGTGGGTTATTGCTGCTGTTTACACTTCAGCAATTCATTTTTAAGATTTCATTGTTGGTTGTCTTGCTGTTTACATTCTGTTGTTGTATGGGTGAAATTTTGTAAATTTGAATGTACAAAATTTTTGTATTTTTTTTTTTTTTGAAAAGGAACCATTTTGAACTTTACAAACATTAGAATGTAAAAGAAAAAAAAGGACAACTCAACCCATATTTTATGGGTTGGGTTAGAAACTTAATTCTGGTTATTTGGTTTGACCTGTTTACACCTCTAGGTTTGCTTTCGCCGCCCCGATTTGCCTTTGCCACCTCACTCCGGTCACCGTCGACCTCGTCTCAACATAAAGACTATTTTGTTTAAATTGGTTTTACGATTTGTATATAACTTAGAATTTGTGTAACATCAATGCTATAGGGCCAATATTATCAAGCTTTGGATTGGAATGAAGAAATACAGTAGTTCTGTTCCTAGCTCTGGCAAACAGATCGTGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGATGAATCTCTTGACTCGGTATTTTTTCAGTTAAATTATATATGCTTGTGTTACATTTTTTGAAAGGAATTCTTTTATTTGTAAGTTGATGTTCACCGTATTGTATAGGAAGAGGAGAATATAGAGCGTGAGCTTGCAGATGTAACTTTTGAAGAGTTACAAAGGGCACGGTCTGATGGATCACATTCCATGTACCAAAAGACCAAACAAGAGAAGAAAAGTGGGCGGGCGAACAAGAACAGGTAGCTTGTGGGTACTAATTATTGTTTTTTGATTTATCTCTTACAACTTGGAAGTTGATGAAGTGCATGATTGTAATTTCTTTGTGAAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATGTGAGTTGTTTATTTCCTTTTCTGTTTGTTCATTATCCTAAAAGACACATCTCACTTTAATGGAGTTCTAGTGCAAGCTAAGAAATAGTTAAATCTCTCTCTCCACACTAACTGGAGCTTGGTTCATTGGTTATTTTTTGGTTTTCAGATGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGCTGATGGGTGAGTTTTTCTTGATCCAAGGTTTGAATGGTTTGATGAACTTTTTGACATGGTGGAATGAATGTTGTCATCTATCATAAAAAAATTTCTTCTTAAATTTTCATACAGGCTATTTACTTTATAATCATCTTACTTCTTTGTTTGAAATCGTAATGGTATGTTTGTATGTTTCTTTGAATCTTACAGATTTAAAAAGAGATATAGTTTCATATACGAGAAAACTCTTCCAGCTGAAAAAGAGGTCAATACTTCTCCTTTTCCTTGATATATCCCTCTAGTGATATCGTTTTTAATTTTATATTCTAAACCTAAATTCAGCTAACTTGGATGCATTTTGCATATTGAAACGTTTACTGGCACAACAGGAACTGAAAAAGCAGTTAAGGAAAACAAATGATCCAAATGTTGCTGAAGAACTAAAAAAGCAATTATCTTGGATTGTAAGTATAATTCTTTTGATTCATATATAATGAGTCTCATGTTCTCTAATGTAATGCCATAAAAAGAGATGTTTTATGGTCTGGAAGAAAAATGAGAATGAAGTTTGTACTTGGTGAGAATTAGGGAAAAAAAAAAAGCTCAAACTTATTTTATAGAATAAAGACAAAAACTTCTTACTTCTTTATCACCAAGTTTTGTTTGATCATAGTCTTATTATTTGTGTACACAGGTCCACTGTATGTTGATTTTTTATTGTTTTCATGTATTTTCAGGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCCTTCTATCTTAAGAAATGTAAAATTTCTCTTCCTCTCTTTTTGAATGACTCTTTCCCTCAAAGGTGTGCGCTTAGGGTATGGTCTAGATCTTCTGCTTGAAACTTTTAAACCTTGGGTGACCGATGGTAATTATTTTCTGATGGTAGTTATGCAAGCGGGGGACTTTTGAACATTGGACTTATGTGCTTGTGATTAGCACAAGACACTAGTATTTTAATTGGGATTTAATTTGATTACTCTGAGTTGCAGAACATTGGTCTCACGCTGGTATTAATTTGCTGTCTAAGAAAAAGAAAGAAAAAACCAGGCCTTAACATCAAGGGAAAGGGAAGTTTCTAGGGAAAAAGTATAATTACACATTTCAAACATGAAAACATGATTGGCATGCTCTTGGTTTTCAGTGATCATGGTAATCACGGGGATTCATTAGAAGAGTCATATTTGGTTTCTTGTTAGATTTTATGTTTCTACTTCAGCTTTGACGTAGGGAAGGTTAGGTGGGGGATCTCGTTAGCTGTGATTTTTTGGTGACAATTGGATTTGGGTAGTTGTGCTTCCAGATAGGAGAGAGTAATCTTTTTGGTATTTCCTGAATTCTGTAGCTCCTGTTGCAGGAGCTGTAGGACTCTGAACTCTTCGATTTCTATGAAATTACCTCCATGTCTTATTTTATTAGATTGGAGCTTCTTTTCATAGTTTGAGTCTCTTTGGTCTTCTATCGGCTCTAGTATTCTTTCATTTTATACCACAAAAATTCAACTATTCATTGAAAAACAATACTGATTTCTTAAAAGAGTTCATTTGGTCAATGGGAAAGCCCGTTAAATGTTAACAATTATGATTGTTTTTGTCTTCAGCTCTTTAAGATGCTTCACTTGGTAGTTTTGCCTTTGTAATAGCTGTTGACACTGTCTTTGGTATTGTTTCAGCTGAAATTCGAAAGCAAAGGCTTGTCGAAAAATACACCAATCTTAAGGTATAAATCTGCCATTTCTCACAACATAATTATATTTCAACACGGTCAGTTTAATGCTACTTATGCATCTGAATTTGCAATTAACCACTCTTGAGTTTGAACAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGAAAGAGGAGGAAGAATGCTGCAAAGGATCGTAGATACATACCATATCAAAGGTCTAGTAAGCTTGATGAGCAAGATTGAAGGAGGTTCATGTTCCATATGTTTTTAAATTTAACCTCACCCAAGATTTTACTTTTCATTTCTTAGGCTATTGCAGAAGCAGAATAGAAAAGAGATTATTTTTAATTTGTTA

mRNA sequence

TCGGGGAGCCATTTATGAAACTCAGAATTCCTATTTCTTTCACTTCTCTCGGAATTCCGTTGATTTATGCCGCAGTAGAGTCCTCCGGATCAGTCTCGCCACTGTATTAGGCTAACAACTTCTCTTCCTCGCGCTGTGCGTTCCTTCTTCTCTGTTTCTCTTCCTCTGCTCCTCTTCTCACTTCTCACCTCAGTTTTGCGCCGTTCGTCTCCTCCTCGCCGTCTGTTTTCCTCATCTTCTCCTTCCGACTTCTGACGGCCATCCTAACAGGGCCAATATTATCAAGCTTTGGATTGGAATGAAGAAATACAGTAGTTCTGTTCCTAGCTCTGGCAAACAGATCGTGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGATGAATCTCTTGACTCGGAAGAGGAGAATATAGAGCGTGAGCTTGCAGATGTAACTTTTGAAGAGTTACAAAGGGCACGGTCTGATGGATCACATTCCATGTACCAAAAGACCAAACAAGAGAAGAAAAGTGGGCGGGCGAACAAGAACAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATATGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGCTGATGGATTTAAAAAGAGATATAGTTTCATATACGAGAAAACTCTTCCAGCTGAAAAAGAGGAACTGAAAAAGCAGTTAAGGAAAACAAATGATCCAAATGTTGCTGAAGAACTAAAAAAGCAATTATCTTGGATTGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTGTCGAAAAATACACCAATCTTAAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGAAAGAGGAGGAAGAATGCTGCAAAGGATCGTAGATACATACCATATCAAAGGTCTAGTAAGCTTGATGAGCAAGATTGAAGGAGGTTCATGTTCCATATGTTTTTAAATTTAACCTCACCCAAGATTTTACTTTTCATTTCTTAGGCTATTGCAGAAGCAGAATAGAAAAGAGATTATTTTTAATTTGTTA

Coding sequence (CDS)

ATGAAGAAATACAGTAGTTCTGTTCCTAGCTCTGGCAAACAGATCGTGGAGGAAGAAAGTGAAGATCTTGAATCTTCTTCCTCAGATGAATCTCTTGACTCGGAAGAGGAGAATATAGAGCGTGAGCTTGCAGATGTAACTTTTGAAGAGTTACAAAGGGCACGGTCTGATGGATCACATTCCATGTACCAAAAGACCAAACAAGAGAAGAAAAGTGGGCGGGCGAACAAGAACAGGCCAATGGAGGTTAGCAGCAGGAAACCAGTTAGTAGGTTTAGGGAGGTCATTCAGGCTCCTAAAAATATGGTACGTGATCCACGTTTTGAATCTTTATCTGGTACTCTTGATGCTGATGGATTTAAAAAGAGATATAGTTTCATATACGAGAAAACTCTTCCAGCTGAAAAAGAGGAACTGAAAAAGCAGTTAAGGAAAACAAATGATCCAAATGTTGCTGAAGAACTAAAAAAGCAATTATCTTGGATTGACAAGCAATTCAAATCCGACTCCACAAAACGTGTTGATGCTGCAATTCTGGCCAAACATAAGAAGAAAGAGAGAGAAGCAGCCAAACATGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTGTCGAAAAATACACCAATCTTAAGTCCACTGGGAAGCTTGATGCTTATGTGGAAAGAAAGAGGAGGAAGAATGCTGCAAAGGATCGTAGATACATACCATATCAAAGGTCTAGTAAGCTTGATGAGCAAGATTGA

Protein sequence

MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIPYQRSSKLDEQD*

Homology

[Close]

BLAST of Cucsa.237340 vs. Swiss-Prot
Match: RRP36_NEMVE (Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis GN=v1g245966 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.1e-36
Identity = 89/238 (37.39%), Postives = 139/238 (58.40%), Query Frame = 1


Query: 19  ESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKT----KQEKKSG- 78
           +S D ES + D S + E E+++ EL+ + F ELQ  +       Y        +E+  G 
Sbjct: 7   DSSDDESPTDDCSDEGEVEHLKDELSQIPFCELQDLKDKIGSKKYNLAIHGIMEERTQGI 66

Query: 79  -----RANKNR-PMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFKKRYSFI 138
                +  KN+ P E+SS++ V + R+V+Q  K M RDPRF+ LSG  + D F+K YSF+
Sbjct: 67  PDLETKKKKNKGPQELSSKQRVPKLRKVVQVKKKMGRDPRFDDLSGKFNEDLFRKSYSFV 126

Query: 139 YEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKER 198
            +  +  EK+ ++K+L+KT +    + L   L  +++Q +S  +         K K+ ER
Sbjct: 127 NDIRVE-EKKSVEKELKKTKNAEKRKNLNDLLKVMNQQERSRKSAEAKRESKKKIKETER 186

Query: 199 EAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIPYQR 246
           E  + GKKPFYL+KSE++K  L EKY  LKS GKL  Y+ ++R+K A+KDRR++P +R
Sbjct: 187 ELVQKGKKPFYLRKSELKKLELAEKYKELKSKGKLQKYLTKRRKKTASKDRRHVPERR 243

[Close]

BLAST of Cucsa.237340 vs. Swiss-Prot
Match: RRP36_SCLS1 (rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=rrp36 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.5e-34
Identity = 93/268 (34.70%), Postives = 148/268 (55.22%), Query Frame = 1


Query: 5   SSSVPSS-GKQIVEEE---SEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 64
           S S PS  G+   EEE   S++ E    +E+ +SEEE      A ++F  L +A++  S 
Sbjct: 32  SDSAPSEIGRDDNEEEESSSDETEDEVEEEASESEEETSNDAAASISFGALAKAQATMSK 91

Query: 65  SMYQKTKQEKKSG-----------------------RANKNRPMEVSSRKPVSRFREVIQ 124
              + +K+ KKS                        R++KN P E+SS+K VSR REV+ 
Sbjct: 92  PSKRDSKKSKKSNADGWEDNEATERKAGKKDQRDFTRSSKNAPTEISSKKAVSRRREVVP 151

Query: 125 APKNMVRDPRFESLSGTLDADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKK 184
             K  +RDPRF+   G +D    +K Y F+ +     E ++L+K ++KT D +  E+LK+
Sbjct: 152 VKKREIRDPRFDPTHGPVDMGKIEKVYDFLVDYR-EDEIKKLRKTIKKTKDEDEKEKLKR 211

Query: 185 QLSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLK 244
            L  ++ + K+D+ KR    IL KH+K+E+E  K GK P+YLKK+E +K+ L++ Y  LK
Sbjct: 212 DLLSMESRKKTDAKKRKAREILDKHRKEEKELVKEGKTPYYLKKAEQKKRVLLDTYGELK 271

Query: 245 STGKLDAYVERKRRKNAAKDRRYIPYQR 246
              +LD  +ER+R+K   K+++ +P  R
Sbjct: 272 GR-QLDRVIERRRKKVEGKEKKNMPRAR 297

[Close]

BLAST of Cucsa.237340 vs. Swiss-Prot
Match: RRP36_BOTFB (rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) GN=rrp36 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.6e-34
Identity = 92/267 (34.46%), Postives = 144/267 (53.93%), Query Frame = 1


Query: 5   SSSVPS-SGKQIVE--EESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHS 64
           S S PS +GK   E    S++      DE L   EE      A ++F  L +A++  S  
Sbjct: 32  SDSAPSETGKNDAEGGSSSDEEVDDDDDEELSESEEEASNGAASISFGALAKAQATMSKP 91

Query: 65  MYQKTKQEKKSG-----------------------RANKNRPMEVSSRKPVSRFREVIQA 124
             + +K  KKS                        R++KN P EVSS+K VSR REV+  
Sbjct: 92  SKRDSKNLKKSNGDGWEDNEATERKAGKKDQRDFTRSSKNAPTEVSSKKAVSRRREVVPV 151

Query: 125 PKNMVRDPRFESLSGTLDADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQ 184
            K  +RDPRFE  +G +D    +K Y F+ +     E ++LK+ +RKT D +  E+LK++
Sbjct: 152 KKREIRDPRFEPTNGPVDMQKIEKNYDFLVDYR-EDEMKKLKETIRKTKDEDEKEKLKRE 211

Query: 185 LSWIDKQFKSDSTKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKS 244
           L  ++ + K+D+ KR    +L KH+K+E+E  K GK P+YLKK+E +K+ L++ +  LK 
Sbjct: 212 LLRMESRKKTDARKRKAREVLDKHRKEEKELVKEGKTPYYLKKAEQKKRVLLDTFGELKG 271

Query: 245 TGKLDAYVERKRRKNAAKDRRYIPYQR 246
             +LD  +ER+R+K   K+++ +P  R
Sbjct: 272 R-QLDRVIERRRKKVEGKEKKNMPRAR 296

[Close]

BLAST of Cucsa.237340 vs. Swiss-Prot
Match: RRP36_NECH7 (rRNA biogenesis protein RRP36 OS=Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) GN=RRP36 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-32
Identity = 86/258 (33.33%), Postives = 143/258 (55.43%), Query Frame = 1


Query: 18  EESEDLESSSSDESLDSEEENIER----ELADVTFEELQRAR----SDGSHSMYQKT--- 77
           +E ED E S S+E  + E E  E+    +L+ ++F  L +A+    S    S   KT   
Sbjct: 52  DEDEDEEGSDSEEGSEEEPEPEEQTPKVDLSSISFGALAKAQATLPSTSRRSKSSKTATE 111

Query: 78  ----------------KQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFES 137
                           K + K  R++K+ P E +S+KPVSR RE++   +   RDPRF+ 
Sbjct: 112 SSRTETTPAPRKSTRSKDDPKPKRSSKHAPQEQTSKKPVSRRREILPDNRRQYRDPRFDP 171

Query: 138 LSGTLDADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDS 197
           L G +D +   K Y+F+ E     E  +L+ Q++KT D    E++K+QL  ++ + K+  
Sbjct: 172 LVGKVDEEKASKAYAFLDEYR-EKEMSDLRAQIKKTKDTYAKEDMKRQLQAMESRKKARK 231

Query: 198 TKRVDAAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKR 249
            K  +  +L +H+KKE+E    GK PFYLK+SE +KQ LV++Y  + S G++D  +ERKR
Sbjct: 232 RKEEEENLLKEHRKKEKELVAQGKTPFYLKRSEQKKQILVKRYEGM-SKGQVDRAIERKR 291

[Close]

BLAST of Cucsa.237340 vs. Swiss-Prot
Match: RRP36_SCHJY (rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) GN=rrp36 PE=3 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 5.3e-32
Identity = 82/253 (32.41%), Postives = 136/253 (53.75%), Query Frame = 1


Query: 17  EEESEDLESSSSDESLDSEEENIERELADVTFEEL---QRARSDGSHSMYQKTKQEKKSG 76
           E ES D  +  S+E  D E  + +R+L  + F EL   QRA         QK   +    
Sbjct: 37  EVESTDEANDESEEKTDLE--STQRQLKSIPFSELLEAQRALKSEKVKFTQKNGAKLSKN 96

Query: 77  RA------------------NKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTL 136
           R                   +K+ P+E+SS++ V RFREV+  PK + RDPRF++LSG L
Sbjct: 97  RRRHESPSDSEDDDDDRNDRSKHAPVEMSSKRAVPRFREVVHVPKPLRRDPRFDTLSGNL 156

Query: 137 DADGFKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVD 196
           + D  K  Y F+ E  L +E ++L+++L+   +    E +K+ L  +  + +        
Sbjct: 157 NVDKVKNNYGFVMEYRL-SEIKQLEQELKSCREQERRERIKEALKSLRSKLERRKEDERT 216

Query: 197 AAILAKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAA 249
           A +L +H++ E+E  + GKKPFYLKKSE +K   ++KY +++ T  LD Y+E+K+++ A 
Sbjct: 217 ARVLKEHRQSEKEKIRQGKKPFYLKKSEQKKLLQLDKYKSMEGTKALDRYMEKKQKRRAQ 276

[Close]

BLAST of Cucsa.237340 vs. TrEMBL
Match: A0A0A0KUS3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648700 PE=3 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 4.3e-137
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
           SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF
Sbjct: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 241 IPYQRSSKLDEQD 254
           IPYQRSSKLDEQD
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]

BLAST of Cucsa.237340 vs. TrEMBL
Match: V4TK62_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021851mg PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.1e-92
Identity = 165/251 (65.74%), Postives = 211/251 (84.06%), Query Frame = 1


Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKK +++   S K   +EESE+   ++S  S + EEE IERELA++TFE+L +ARSDGSH
Sbjct: 1   MKKPNNATAGSSKTKFKEESEEDNKTTSVTSSE-EEEEIERELAEITFEDLLKARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
            +Y+K  QEKK+GRANKNRPMEVS++KPVSRFREV+QAPK +VRDPRFESL G LD +GF
Sbjct: 61  LVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           +KRY F++E TLPAEKEELKKQL+KTNDPN  ++LKK++SWIDKQ + +STK  DAAILA
Sbjct: 121 RKRYDFLFENTLPAEKEELKKQLKKTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           +HKKKEREAAKHGK+PFYLK SEIRKQRL+EKY  LK +GK+++++E++RRKNAAKD +Y
Sbjct: 181 EHKKKEREAAKHGKRPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKY 240

Query: 241 IPYQRSSKLDE 252
           +PY+R +  D+
Sbjct: 241 MPYRRPNNNDQ 250

[Close]

BLAST of Cucsa.237340 vs. TrEMBL
Match: A0A067FBL3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022953mg PE=3 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 7.1e-92
Identity = 165/251 (65.74%), Postives = 211/251 (84.06%), Query Frame = 1


Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKK +++   S K   +EESE+   ++S  S + EEE IERELA++TFE+L +ARSDGSH
Sbjct: 1   MKKPNNATAGSSKTKFKEESEEDNKTTSVTSSE-EEEEIERELAEITFEDLLKARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
            +Y+K  QEKK+GRANKNRPMEVS++KPVSRFREV+QAPK +VRDPRFESL G LD +GF
Sbjct: 61  LVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           +KRY F++E TLPAEKEELKKQL+KTNDPN  ++LKK++SWIDKQ + +STK  DAAILA
Sbjct: 121 RKRYDFLFENTLPAEKEELKKQLKKTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           +HKKKEREAAKHGK+PFYLK SEIRKQRL+EKY  LK +GK+++++E++RRKNAAKD +Y
Sbjct: 181 EHKKKEREAAKHGKRPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKY 240

Query: 241 IPYQRSSKLDE 252
           +PY+R +  D+
Sbjct: 241 MPYRRPNNNDQ 250

[Close]

BLAST of Cucsa.237340 vs. TrEMBL
Match: A0A067JNE1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20662 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 7.4e-89
Identity = 162/253 (64.03%), Postives = 210/253 (83.00%), Query Frame = 1


Query: 1   MKKYSSSV-PSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGS 60
           MKK + S+ PSS ++ VE E ED E  SS  S + +E  IERE+AD TFEELQ+ARS+GS
Sbjct: 1   MKKSNKSIAPSSSRRSVESE-EDAELLSSSSSSEEDESEIEREIADATFEELQKARSNGS 60

Query: 61  HSMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADG 120
            ++Y K KQ+KKSGRANKNRP+E S +KPVSRFREV+QAPK ++RDPRFESLSG LD +G
Sbjct: 61  VTVYSKPKQDKKSGRANKNRPVEASCKKPVSRFREVVQAPKKVIRDPRFESLSGNLDVEG 120

Query: 121 FKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAIL 180
           F+KRY+F++E  LPAEKEELKKQL K+NDP V ++LK ++SWIDKQ K +S K+ DA+IL
Sbjct: 121 FRKRYNFLFEDNLPAEKEELKKQLNKSNDPRVIDQLKNRISWIDKQLKFESKKQTDASIL 180

Query: 181 AKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRR 240
           A+HKKKEREAAK GK+PFYLKKSEIR QRL++++  LK +GKL++++E+KRRKNA+KD R
Sbjct: 181 AEHKKKEREAAKQGKQPFYLKKSEIRNQRLIKEFNKLKGSGKLESFIEKKRRKNASKDHR 240

Query: 241 YIPYQRSSKLDEQ 253
           ++PY+RSS  ++Q
Sbjct: 241 FMPYRRSSNSEQQ 252

[Close]

BLAST of Cucsa.237340 vs. TrEMBL
Match: C6TDE9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G082900 PE=2 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.8e-87
Identity = 160/249 (64.26%), Postives = 201/249 (80.72%), Query Frame = 1


Query: 2   KKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHS 61
           +K    VP S +   EE  +D  SS+   S D EEE IE+ELADVTFEELQ+ARS+G+H+
Sbjct: 3   QKQRDRVPDSMETQYEESEKDESSSAYSSSEDEEEEEIEKELADVTFEELQKARSNGTHA 62

Query: 62  MYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFK 121
            +QK K++KK  RANKNRPME SS+KPVS FREVIQAPK +VRDPRFESL G LD +GF+
Sbjct: 63  FFQKPKEDKKLKRANKNRPMEASSKKPVSGFREVIQAPKKVVRDPRFESLCGKLDPEGFR 122

Query: 122 KRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAK 181
           KRY+F+YE  LPAE++ LKK+L+K  DP    E+++++SWIDKQ KSDS K +DA ILAK
Sbjct: 123 KRYNFLYENDLPAERQALKKELKKYKDPKRINEIEERVSWIDKQLKSDSAKHIDAEILAK 182

Query: 182 HKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYI 241
           HKKKEREA K GK+PFYLKKSEIRKQRL+EKY +LKS+GKL+A+VE++RR+NAAKD RY+
Sbjct: 183 HKKKEREATKQGKRPFYLKKSEIRKQRLIEKYNHLKSSGKLEAFVEKRRRRNAAKDHRYM 242

Query: 242 PYQRSSKLD 251
           PY+RS  ++
Sbjct: 243 PYRRSGDVE 251

[Close]

BLAST of Cucsa.237340 vs. TAIR10
Match: AT1G12650.1 (AT1G12650.1 unknown protein)

HSP 1 Score: 271.6 bits (693), Expect = 5.1e-73
Identity = 136/242 (56.20%), Postives = 181/242 (74.79%), Query Frame = 1


Query: 10  SSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQE 69
           SS K + E+  ED + S S  S   EEE  E+EL   TFEE+ + R+DGS ++  K  Q 
Sbjct: 10  SSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWKPNQV 69

Query: 70  KKSGRA--NKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGFKKRYSFI 129
           KK+GRA  NKNRPMEVSS+KPVSR+REV+  PK  VRDPRF  L GTLD +GF+KRY+F 
Sbjct: 70  KKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKRYNFF 129

Query: 130 YEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSD-STKRVDAAILAKHKKKE 189
           +E  LP E+EELKK+L+KT +P   +ELK QL++++K  K + ST+   AAIL +HKKKE
Sbjct: 130 FEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEHKKKE 189

Query: 190 REAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIPYQRS 249
           REAAK GK+P+YLKKSEIRKQ L+EKY +LK +GKL +Y++++R+KNA KD R++PY+R+
Sbjct: 190 REAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMPYRRA 248

[Close]

BLAST of Cucsa.237340 vs. NCBI nr
Match: gi|449447559|ref|XP_004141535.1| (PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis sativus])

HSP 1 Score: 495.4 bits (1274), Expect = 6.1e-137
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
           SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF
Sbjct: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 241 IPYQRSSKLDEQD 254
           IPYQRSSKLDEQD
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]

BLAST of Cucsa.237340 vs. NCBI nr
Match: gi|659113574|ref|XP_008456647.1| (PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo])

HSP 1 Score: 487.3 bits (1253), Expect = 1.7e-134
Identity = 248/253 (98.02%), Postives = 250/253 (98.81%), Query Frame = 1


Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKKYSSSVPSSGKQI+EEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKYSSSVPSSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
           SMYQKTKQEKK GRANKNRPMEVSSRKPVSRFREVIQAPK+MVRDPRFESLSGTLD DGF
Sbjct: 61  SMYQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           KKRYSFIYEK LPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA
Sbjct: 121 KKRYSFIYEKNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240

Query: 241 IPYQRSSKLDEQD 254
           IPYQRSSKLDEQD
Sbjct: 241 IPYQRSSKLDEQD 253

[Close]

BLAST of Cucsa.237340 vs. NCBI nr
Match: gi|568847136|ref|XP_006477395.1| (PREDICTED: rRNA biogenesis protein rrp36 isoform X1 [Citrus sinensis])

HSP 1 Score: 350.9 bits (899), Expect = 1.9e-93
Identity = 164/251 (65.34%), Postives = 212/251 (84.46%), Query Frame = 1


Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKK +++   S K   EEESE+ E+ ++  +   EEE IERELA++TFE+L +ARSDGSH
Sbjct: 1   MKKPNNATAGSSKTKFEEESEEEENETTSVTSSEEEEEIERELAEITFEDLLKARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
            +Y+K  QEKK+GRANKNRPMEVS++KPVSRFREV+QAPK +VRDPRFESL G LD +GF
Sbjct: 61  LVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           +KRY F++E TLPAE+EELKKQL+KTNDPN  ++LKK++SWIDKQ + +STK  DAAIL+
Sbjct: 121 RKRYDFLFENTLPAEREELKKQLKKTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILS 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           +HKKKEREAAKHGK+PFYLKKSEIRKQRL+EKY  LK +GK+++++E++RRKNAAKD +Y
Sbjct: 181 EHKKKEREAAKHGKRPFYLKKSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKY 240

Query: 241 IPYQRSSKLDE 252
           +PY+R +  D+
Sbjct: 241 MPYRRPNNNDQ 251

[Close]

BLAST of Cucsa.237340 vs. NCBI nr
Match: gi|567896106|ref|XP_006440541.1| (hypothetical protein CICLE_v10021851mg [Citrus clementina])

HSP 1 Score: 345.1 bits (884), Expect = 1.0e-91
Identity = 165/251 (65.74%), Postives = 211/251 (84.06%), Query Frame = 1


Query: 1   MKKYSSSVPSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSH 60
           MKK +++   S K   +EESE+   ++S  S + EEE IERELA++TFE+L +ARSDGSH
Sbjct: 1   MKKPNNATAGSSKTKFKEESEEDNKTTSVTSSE-EEEEIERELAEITFEDLLKARSDGSH 60

Query: 61  SMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADGF 120
            +Y+K  QEKK+GRANKNRPMEVS++KPVSRFREV+QAPK +VRDPRFESL G LD +GF
Sbjct: 61  LVYRKNSQEKKAGRANKNRPMEVSAKKPVSRFREVVQAPKRVVRDPRFESLCGNLDVEGF 120

Query: 121 KKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILA 180
           +KRY F++E TLPAEKEELKKQL+KTNDPN  ++LKK++SWIDKQ + +STK  DAAILA
Sbjct: 121 RKRYDFLFENTLPAEKEELKKQLKKTNDPNAVDKLKKRISWIDKQLRFESTKSTDAAILA 180

Query: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRY 240
           +HKKKEREAAKHGK+PFYLK SEIRKQRL+EKY  LK +GK+++++E++RRKNAAKD +Y
Sbjct: 181 EHKKKEREAAKHGKRPFYLKNSEIRKQRLIEKYNKLKGSGKVESFIEKRRRKNAAKDHKY 240

Query: 241 IPYQRSSKLDE 252
           +PY+R +  D+
Sbjct: 241 MPYRRPNNNDQ 250

[Close]

BLAST of Cucsa.237340 vs. NCBI nr
Match: gi|802741040|ref|XP_012087001.1| (PREDICTED: ribosomal RNA processing protein 36 homolog isoform X2 [Jatropha curcas])

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-88
Identity = 162/253 (64.03%), Postives = 210/253 (83.00%), Query Frame = 1


Query: 1   MKKYSSSV-PSSGKQIVEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGS 60
           MKK + S+ PSS ++ VE E ED E  SS  S + +E  IERE+AD TFEELQ+ARS+GS
Sbjct: 1   MKKSNKSIAPSSSRRSVESE-EDAELLSSSSSSEEDESEIEREIADATFEELQKARSNGS 60

Query: 61  HSMYQKTKQEKKSGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDADG 120
            ++Y K KQ+KKSGRANKNRP+E S +KPVSRFREV+QAPK ++RDPRFESLSG LD +G
Sbjct: 61  VTVYSKPKQDKKSGRANKNRPVEASCKKPVSRFREVVQAPKKVIRDPRFESLSGNLDVEG 120

Query: 121 FKKRYSFIYEKTLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAIL 180
           F+KRY+F++E  LPAEKEELKKQL K+NDP V ++LK ++SWIDKQ K +S K+ DA+IL
Sbjct: 121 FRKRYNFLFEDNLPAEKEELKKQLNKSNDPRVIDQLKNRISWIDKQLKFESKKQTDASIL 180

Query: 181 AKHKKKEREAAKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRR 240
           A+HKKKEREAAK GK+PFYLKKSEIR QRL++++  LK +GKL++++E+KRRKNA+KD R
Sbjct: 181 AEHKKKEREAAKQGKQPFYLKKSEIRNQRLIKEFNKLKGSGKLESFIEKKRRKNASKDHR 240

Query: 241 YIPYQRSSKLDEQ 253
           ++PY+RSS  ++Q
Sbjct: 241 FMPYRRSSNSEQQ 252

The following BLAST results are available for this feature:

BLAST of Cucsa.237340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RRP36_NEMVE	6.1e-36	37.39	Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis GN=v1g2459...	[more]
RRP36_SCLS1	1.5e-34	34.70	rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1...	[more]
RRP36_BOTFB	2.6e-34	34.46	rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) GN=rrp36...	[more]
RRP36_NECH7	1.1e-32	33.33	rRNA biogenesis protein RRP36 OS=Nectria haematococca (strain 77-13-4 / ATCC MYA...	[more]
RRP36_SCHJY	5.3e-32	32.41	rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / ...	[more]

BLAST of Cucsa.237340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUS3_CUCSA	4.3e-137	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648700 PE=3 SV=1	[more]
V4TK62_9ROSI	7.1e-92	65.74	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021851mg PE=3 SV=1	[more]
A0A067FBL3_CITSI	7.1e-92	65.74	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022953mg PE=3 SV=1	[more]
A0A067JNE1_JATCU	7.4e-89	64.03	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20662 PE=3 SV=1	[more]
C6TDE9_SOYBN	1.8e-87	64.26	Uncharacterized protein OS=Glycine max GN=GLYMA_07G082900 PE=2 SV=1	[more]

BLAST of Cucsa.237340 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12650.1	5.1e-73	56.20	unknown protein	[more]

BLAST of Cucsa.237340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447559\|ref\|XP_004141535.1\|	6.1e-137	100.00	PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis sativus]	[more]
gi\|659113574\|ref\|XP_008456647.1\|	1.7e-134	98.02	PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo]	[more]
gi\|568847136\|ref\|XP_006477395.1\|	1.9e-93	65.34	PREDICTED: rRNA biogenesis protein rrp36 isoform X1 [Citrus sinensis]	[more]
gi\|567896106\|ref\|XP_006440541.1\|	1.0e-91	65.74	hypothetical protein CICLE_v10021851mg [Citrus clementina]	[more]
gi\|802741040\|ref\|XP_012087001.1\|	1.1e-88	64.03	PREDICTED: ribosomal RNA processing protein 36 homolog isoform X2 [Jatropha curc...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009292	RRP36

Vocabulary: **Biological Process**
Term	Definition
GO:0000469	cleavage involved in rRNA processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0051604	protein maturation
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.237340.1	Cucsa.237340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009292	rRNA biogenesis protein RRP36	PANTHER	PTHR21738	UNCHARACTERIZED	coord: 17..249 score: 1.3
IPR009292	rRNA biogenesis protein RRP36	PFAM	PF06102	DUF947	coord: 74..239 score: 7.0
None	No IPR available	unknown	Coil	Coil	coord: 199..219 scor
None	No IPR available	PANTHER	PTHR21738:SF0	RIBOSOMAL RNA PROCESSING PROTEIN 36 HOMOLOG	coord: 17..249 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.237340	Cla012480	Watermelon (97103) v1	cgywmB445
Cucsa.237340	Csa5G648700	Cucumber (Chinese Long) v2	cgycuB337
Cucsa.237340	ClCG08G000800	Watermelon (Charleston Gray)	cgywcgB418
Cucsa.237340	CSPI05G30780	Wild cucumber (PI 183967)	cgycpiB353
Cucsa.237340	CmaCh09G013010	Cucurbita maxima (Rimu)	cgycmaB0659
Cucsa.237340	CmoCh09G012660	Cucurbita moschata (Rifu)	cgycmoB0658
Cucsa.237340	Lsi08G001020	Bottle gourd (USVL1VR-Ls)	cgylsiB389
Cucsa.237340	Cp4.1LG06g09800	Cucurbita pepo (Zucchini)	cgycpeB0630
Cucsa.237340	CsaV3_5G039810	Cucumber (Chinese Long) v3	cgycucB357
Cucsa.237340	Cla97C08G145140	Watermelon (97103) v2	cgywmbB420
Cucsa.237340	Bhi06G000184	Wax gourd	cgywgoB471
Cucsa.237340	Carg24122	Silver-seed gourd	carcgyB0756

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.237340	Cucurbita maxima (Rimu)	cgycmaB0661
Cucsa.237340	Cucurbita moschata (Rifu)	cgycmoB0661
Cucsa.237340	Melon (DHL92) v3.5.1	cgymeB401
Cucsa.237340	Watermelon (Charleston Gray)	cgywcgB417
Cucsa.237340	Watermelon (97103) v1	cgywmB444
Cucsa.237340	Cucurbita pepo (Zucchini)	cgycpeB0629
Cucsa.237340	Melon (DHL92) v3.6.1	cgymedB399
Cucsa.237340	Silver-seed gourd	carcgyB0203
Cucsa.237340	Watermelon (97103) v2	cgywmbB419
Cucsa.237340	Wax gourd	cgywgoB474