Csa5G221960 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAAAGCAAGAATTAAAGCACCAAACCAAACTCTTCAGCTGTGTGTGTATCGTCCTCTCTACCAACCTACTCTGCCTCCGCATTGATAAATGACAGAGCTCTATATATGGCCTCAATTACCAAGCTTAAAATCCCATCTCCTTCACCGGCGACCCTATTTTCTCTCTCCCTCTCAACGTCTTCCTTTCCTTCTCCCTCGCCGATCAGTAACCTCTTCTTTCCCCTTTCCTCTATTAAATGCACACCAATTTTTGTTCTCGTTTTTATGCTTATCAACTGTTTCTGTAAATGTCTCATTGAAAACCCACATGCCATTTCATTCTAATTTGTCTCTCCGCTCTCAAAATTGGGCCTTTTGTATGTGTTTATGGCCTTCGGAATTGCATGGTTTTCTTTCCTTTACTCTTAAAGACACAGCAATTTTTGTTCTTGTTTTTATGAATATCCACTGTTTGTGTCAATGTCTCAAAGAATACTCGCATGTGATTTCACTCTAATTTATCTCTCTGCTCCCAGATTGGGGGATTTTTATGCGTTTATGGCCTTTGAAATTCGAAGTGATTGATGGATTTGTTGGGGTTTTGTTTGATTTTGTGTGAATTGGCTGATGGTTTTGTTTTGTGTTGGGTGTTTGGAAAACCTTGTGAGCAGTGGGAAGTGAAGTGGAAGTGGTAGCAGACATTGATTTCCCAAAGCAGATCGTTAAGGCCAAGCCGTTATCTCTGTTGGGTCATGGTGAGTTGAGTTCATCCTCCTTTCATTTCACTTTTTTTTCTCTCCTTTCTCTAAATTACAATATGTAATATATATGTCACTTTTTGTAAAAAAAAAAAATCTTTCTTATAATGAACCATTTAATGAATAAAATTTGGTTTGTATTTTGATTTAGTTACTCTAATTTCAAATTTTGTAACAATTTAAATCCAAATGACTAAATCATTACAAAATTGAAGAAATTGAAAGTATATGATCAACTAAATCATCACAAAATCAAAATCTTAGGAACTAAATTGTTACTTTCGTATAACTTTAGAAACTAACATACTTTCTATATTATCATATATTATAAGTTAAGATATCGTGTTATGCAAAACAATGAATATTCAAAAAGTTTTAACACAAACTTGTTCATAAATTTATTTAATTAATAATAATTTATATTTAACTTAATACAGTGAGTAACTAACATTAGTTGAAATGTGATAGTTTTAATTTTGATTGATGTGTATGGGATATACATATATATATATATGTGTGTGTGTGTATGTAACAGGAAGTACAGAGATAGAGATTCACTTTCTAGAAATAAAGTTGACTGCGATTGGAGTTTATTTGGAGCCTTCAATTGTGGAGCATTTGCAACAATGGAAGGGAAAAGCTGCTAAGGACTTGGAGGAAGACGATGACTTCTTTCAGGCTATTATTTCTGGTATCTCCCTAATCATCCTATTTAACTGTGTCCCATTATGTGAAGAACTTGACCATTTGTTCAAACATATTTCATTCTTAGATGATAATGTTTCATATCTATCATGTTCATATACTACTCATCATGTGTGCCAAGGACTACTTAGATCCATTTGAACATATTCCATTTTTAGATCATAATGTTGCATATCTATCATGTTCATATACTACCTCGTTGAATTTCTCATGTTCTATATATATATATATAATAAGTGTAGTTGAGTAGACAGAGGAAGAATATTATGAGCTTCAAAGTCAAAGATTTGATTTTCATCTAACATACTTAAAAAAAAATGAAAGCGTATCTAAATATACTATTTTGTCAATATACTTTAAAGTTAAAAGCAAAATGTAAAATTATTATAAATTAACTTCATAGATTCCAAAAACATATATTAAATTAAGTTTAAATTATATAACTAACACCTTTCAATTTTGTCACTTGTTTAAAAAATATCTTTTATCATTTCAAAAATGGTAAAATGAGTCCTAATTTTTCATAAATATAAGATAATTCCTTTAGAATTTCGAACATGTATTAAATGTTGTATGTTTTGTTCTACGTCACTGTTACCACTTTATTTCATCTACCATTCTGAAAATTTATACTCTAAAAGTACTTTTGGAGCGTTCTAAATTTTCAATGAAAATATATATTGCGACTTTTGAAAGTATAGAAAATAGATAGATATAAGAAGATTTCAAACTTGTGAGGTTTTGTACTCAAAACAAGAGGACATTGTGTATCAAGTTAATTATCGAATATTTCTCCCAAAATCTCAACTCATAACTTGAACTGGGAAAAGCTAAACTCTAACCCTTAAATGCTTCAATTCAAATGGTGACAGCTCCAGTGGAGAAGGTTATAAGAGTAGTGGTGATCAAAGAGATCAAAGGGTCACAATATGGAGTGCAGTTGGAGAGTGCAGTTAGGGATAGATTGGCAGCTGATGACAAATATGAAGATGAAGAGGAAGCTCAGTTGGAAAAAATTGTTGAATTTTTTCAGTCCAAATATCTGAAGACACATTCTGTTATAAACTTCCATTTCCCACCAGCTTCAACCATTGCTGAGGTAACTAACTTCTCTAAGAGATTATCATTTTATTTTTGTTTATTTTCTTAATTTTGTTTTAATTACAAATTTGGTTACGTTATTTAGAAAATGTTAGAGTTTTGTTTGATTAAATCTAATCAATAGTCCCGTTCCTATTATATAAATTATTATTTATCCGTTTAGTTCATACATTTTGAGGTGTTTAATTGACTTTTAAAGTTTAAAAGGCGTCTAATAAGTTGTTAGTAGACAAGGAAGTATGGAATGATTTTGTTCCGCGTTAGCTAGAATGGAACTCCAAATAGTTGGCTTTTGAGGTGCGATTCTGGGGAGTATCTAAAACATGTGTTTGAACTTTCAATTTGTGTTGAATGAAATTCAAGTAACAATTAATTGTTTCCATAGTGCATATAGTTTGTAAAAGAGTATATCTGATATATATATATATATTTGTTACATGGAATTTGCAGATAGAGTTTTCAAGTGATGAGAAAGAGGAGTCAAAGATGAAAGTTGAGAATGGAAATGTGGTTGAAATGATTAAGAAATGGTACTTGGGTGGGACTAGAGGTGTGTCTCAACCAACCATATCATCATTGGCTAACAATCTTGCCATTGAATTATCTAAATGAACCCTAAACCCCACCTTTGAACTTCTTTTGCACAATGCTTGCTTTTTTTCTTTCTTTTCTTAATTACTGTAACAGTGGTTACTGTTGAAGTGGTGAGCTTAGGTTTTGAATAATATTTGAACTCTTGGTTGAAGATGTATGCTTAAGTAGTATTTTTTTTT ATGGCCTCAATTACCAAGCTTAAAATCCCATCTCCTTCACCGGCGACCCTATTTTCTCTCTCCCTCTCAACGTCTTCCTTTCCTTCTCCCTCGCCGATCATGGGAAGTGAAGTGGAAGTGGTAGCAGACATTGATTTCCCAAAGCAGATCGTTAAGGCCAAGCCGTTATCTCTGTTGGGTCATGGAAGTACAGAGATAGAGATTCACTTTCTAGAAATAAAGTTGACTGCGATTGGAGTTTATTTGGAGCCTTCAATTGTGGAGCATTTGCAACAATGGAAGGGAAAAGCTGCTAAGGACTTGGAGGAAGACGATGACTTCTTTCAGGCTATTATTTCTGCTCCAGTGGAGAAGGTTATAAGAGTAGTGGTGATCAAAGAGATCAAAGGGTCACAATATGGAGTGCAGTTGGAGAGTGCAGTTAGGGATAGATTGGCAGCTGATGACAAATATGAAGATGAAGAGGAAGCTCAGTTGGAAAAAATTGTTGAATTTTTTCAGTCCAAATATCTGAAGACACATTCTGTTATAAACTTCCATTTCCCACCAGCTTCAACCATTGCTGAGATAGAGTTTTCAAGTGATGAGAAAGAGGAGTCAAAGATGAAAGTTGAGAATGGAAATGTGGTTGAAATGATTAAGAAATGGTACTTGGGTGGGACTAGAGGTGTGTCTCAACCAACCATATCATCATTGGCTAACAATCTTGCCATTGAATTATCTAAATGA ATGGCCTCAATTACCAAGCTTAAAATCCCATCTCCTTCACCGGCGACCCTATTTTCTCTCTCCCTCTCAACGTCTTCCTTTCCTTCTCCCTCGCCGATCATGGGAAGTGAAGTGGAAGTGGTAGCAGACATTGATTTCCCAAAGCAGATCGTTAAGGCCAAGCCGTTATCTCTGTTGGGTCATGGAAGTACAGAGATAGAGATTCACTTTCTAGAAATAAAGTTGACTGCGATTGGAGTTTATTTGGAGCCTTCAATTGTGGAGCATTTGCAACAATGGAAGGGAAAAGCTGCTAAGGACTTGGAGGAAGACGATGACTTCTTTCAGGCTATTATTTCTGCTCCAGTGGAGAAGGTTATAAGAGTAGTGGTGATCAAAGAGATCAAAGGGTCACAATATGGAGTGCAGTTGGAGAGTGCAGTTAGGGATAGATTGGCAGCTGATGACAAATATGAAGATGAAGAGGAAGCTCAGTTGGAAAAAATTGTTGAATTTTTTCAGTCCAAATATCTGAAGACACATTCTGTTATAAACTTCCATTTCCCACCAGCTTCAACCATTGCTGAGATAGAGTTTTCAAGTGATGAGAAAGAGGAGTCAAAGATGAAAGTTGAGAATGGAAATGTGGTTGAAATGATTAAGAAATGGTACTTGGGTGGGACTAGAGGTGTGTCTCAACCAACCATATCATCATTGGCTAACAATCTTGCCATTGAATTATCTAAATGA MASITKLKIPSPSPATLFSLSLSTSSFPSPSPIMGSEVEVVADIDFPKQIVKAKPLSLLGHGSTEIEIHFLEIKLTAIGVYLEPSIVEHLQQWKGKAAKDLEEDDDFFQAIISAPVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIELSK*
BLAST of Csa5G221960 vs. Swiss-Prot
Match: CFI3_ARATH (Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana GN=CHI3 PE=1 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.2e-68 Identity = 129/209 (61.72%), Postives = 163/209 (77.99%), Query Frame = 1
BLAST of Csa5G221960 vs. Swiss-Prot
Match: CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis GN=CHI PE=2 SV=2) HSP 1 Score: 90.5 bits (223), Expect = 2.7e-17 Identity = 71/216 (32.87%), Postives = 105/216 (48.61%), Query Frame = 1
BLAST of Csa5G221960 vs. Swiss-Prot
Match: CFI_EUSER (Chalcone--flavonone isomerase OS=Eustoma exaltatum subsp. russellianum GN=CHI PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15 Identity = 64/210 (30.48%), Postives = 97/210 (46.19%), Query Frame = 1
BLAST of Csa5G221960 vs. Swiss-Prot
Match: CFI_PYRCO (Chalcone--flavonone isomerase OS=Pyrus communis GN=CHI PE=2 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15 Identity = 69/211 (32.70%), Postives = 98/211 (46.45%), Query Frame = 1
BLAST of Csa5G221960 vs. Swiss-Prot
Match: CFI_ELAUM (Chalcone--flavonone isomerase OS=Elaeagnus umbellata GN=CHI PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 2.5e-15 Identity = 69/213 (32.39%), Postives = 100/213 (46.95%), Query Frame = 1
BLAST of Csa5G221960 vs. TrEMBL
Match: A0A0A0KPA3_CUCSA (Chalcone-flavonone isomerase family protein OS=Cucumis sativus GN=Csa_5G221960 PE=3 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 3.1e-129 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1
BLAST of Csa5G221960 vs. TrEMBL
Match: F6HC36_VITVI (Chalcone-flavonone isomerase family protein OS=Vitis vinifera GN=VIT_13s0067g02870 PE=3 SV=1) HSP 1 Score: 313.9 bits (803), Expect = 1.7e-82 Identity = 156/215 (72.56%), Postives = 180/215 (83.72%), Query Frame = 1
BLAST of Csa5G221960 vs. TrEMBL
Match: H6SV47_PRUPE (Chalcone-flavonone isomerase family protein OS=Prunus persica GN=CHI PE=2 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 4.1e-81 Identity = 156/209 (74.64%), Postives = 172/209 (82.30%), Query Frame = 1
BLAST of Csa5G221960 vs. TrEMBL
Match: A0A067JNS6_JATCU (Chalcone-flavonone isomerase family protein OS=Jatropha curcas GN=JCGZ_03321 PE=3 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 5.4e-81 Identity = 154/208 (74.04%), Postives = 174/208 (83.65%), Query Frame = 1
BLAST of Csa5G221960 vs. TrEMBL
Match: V5M2Y0_PHYEB (Chalcone-flavonone isomerase family protein OS=Phyllanthus emblica PE=2 SV=1) HSP 1 Score: 305.4 bits (781), Expect = 6.0e-80 Identity = 152/209 (72.73%), Postives = 174/209 (83.25%), Query Frame = 1
BLAST of Csa5G221960 vs. TAIR10
Match: AT5G05270.1 (AT5G05270.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 261.2 bits (666), Expect = 6.6e-70 Identity = 129/209 (61.72%), Postives = 163/209 (77.99%), Query Frame = 1
BLAST of Csa5G221960 vs. TAIR10
Match: AT3G55120.1 (AT3G55120.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 78.2 bits (191), Expect = 7.9e-15 Identity = 67/224 (29.91%), Postives = 103/224 (45.98%), Query Frame = 1
BLAST of Csa5G221960 vs. TAIR10
Match: AT5G66220.1 (AT5G66220.1 Chalcone-flavanone isomerase family protein) HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10 Identity = 44/153 (28.76%), Postives = 76/153 (49.67%), Query Frame = 1
BLAST of Csa5G221960 vs. NCBI nr
Match: gi|778701552|ref|XP_011655047.1| (PREDICTED: probable chalcone--flavonone isomerase 3 isoform X1 [Cucumis sativus]) HSP 1 Score: 469.2 bits (1206), Expect = 4.5e-129 Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1
BLAST of Csa5G221960 vs. NCBI nr
Match: gi|659114208|ref|XP_008456952.1| (PREDICTED: probable chalcone--flavonone isomerase 3 [Cucumis melo]) HSP 1 Score: 452.6 bits (1163), Expect = 4.4e-124 Identity = 233/242 (96.28%), Postives = 237/242 (97.93%), Query Frame = 1
BLAST of Csa5G221960 vs. NCBI nr
Match: gi|778701556|ref|XP_011655048.1| (PREDICTED: probable chalcone--flavonone isomerase 3 isoform X2 [Cucumis sativus]) HSP 1 Score: 406.4 bits (1043), Expect = 3.6e-110 Identity = 208/209 (99.52%), Postives = 209/209 (100.00%), Query Frame = 1
BLAST of Csa5G221960 vs. NCBI nr
Match: gi|1009121630|ref|XP_015877562.1| (PREDICTED: probable chalcone--flavonone isomerase 3 [Ziziphus jujuba]) HSP 1 Score: 313.2 bits (801), Expect = 4.1e-82 Identity = 156/209 (74.64%), Postives = 178/209 (85.17%), Query Frame = 1
BLAST of Csa5G221960 vs. NCBI nr
Match: gi|596006005|ref|XP_007218407.1| (hypothetical protein PRUPE_ppa011476mg [Prunus persica]) HSP 1 Score: 309.3 bits (791), Expect = 6.0e-81 Identity = 156/209 (74.64%), Postives = 172/209 (82.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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