Carg00166 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGCAGCAAAATTAAAGCGCCAGACCAAACAAGTCGCGGCCCGTGTCCTTTCTGCGCTACCTACTCTGCTCTGCCTCGGCATAGACATCGACATCGACATCGACGGAGTCCTATTTATAGCGTCTAATTCCAACTCCATGATCTCACATCCTTCACCGTCAAGCCTATTACCGCTCTGCTGCTGAAGAACTAACTTCCTTTCGTTTCTTCATCTGTTTTCCTTTCCCATCACGATCGCGATCAGTAAGGCCTTCTCTCCTTCTTTCTGTTCTCGTTTTCGTGCCTCTCAACTGTTTGTGTTAATGTTTCAATGAAAAACTGCAGCGATTTCACTTGAAAATAGACTCTATTCTGCTAGATTTGGGCATTTTGTTTGTCTGAATTCGATAGATTGATCGATTTGTTGCGTTTTGTGTATCTGAACTTAGGATTTTCTTTTTCTTTCTTTTGATTTGTGCGTTGGCGTTGGAATTTTGTGAACAGTGGGGAGTGAAGTGGAAGTGGTAGCGGACATTGCTTTCCCTAACCAGATCGTTAAGAACAAGCCGTTGTCTCTGTTGGGTCATGGTGAGTCCATACTTTTTCATTTTTCATCATTTTTAATATCTTTTTTCGCTATATTACAAAATATGATGAGAATAATATTATCCAAACTTTTAAAGAATTTATATTTCACTAATATTTTTGAAACATTTATACCACTTTTAAGAAAATATTAGTATTTTAAAAGAATATAGAAATATAAATTAAGGATTTAGAACTCCTTTTTAACTTATGAGATGGTTATCGATGCTTTAATTGTGTGATCTCTATAATTTTGAAAGTATTATTTTATTTTTAATTATAAATATAAAAAATATATTATTAATATTGATAGATAAGTCAAAAGTGAAATATTTTTGAAAGAGATGTGATAGAGATGTATTATGATTTAGCCATTCAAGCTTTTGTGGGTTTTTTTTTTTTGTTATTAATTATTTTTTAGTTTTTCATTCTTTTAAAAAATTAGAGAGATGAAGAAAGGTTTAGAACAGAGGCATGGAAATAATAGTTTAGATACATTAAGATTTTAAAAAATGACTGTTAAATCACTAATAGCGAAGTTCGTGGATATATTACAGGAATTATCGACCTCGAGATTCACTTTCTACAAATAAAATTCACGGCCATTGGAGTTTATCTGGAGCCTGCGATTGTGGAGCATTTGAAGCAATGGAAGGGAAAAGCCGCTGAGGACTTGCTGAAAGATGATGACTTCTTTGAGGCCATTGTTTCTGGTATCTCCCTAATTTTCCTATTTAACTATATACACCAATTATAATACTAAAAGTAATGCCAAAAAAAGCGAGTATAATTTAGCTAGTTGGTCGAGCAATAGTTTTTGGTATAATAAAACGGACGAGTTGATCTATTCAAGTAGTCGAGAATGTTAGATGAACACGACTCTCCATAATGGTATGATATGTTCTACTTTGAGTCCCAAAAGGTCTCACACTAATGGAGAGTGTGAGTATTCCTTGATTATAACCCATGATCATTCTCTAAATTAGCCAATGTGGACTTTGATCCAACACCTCCCCTTGAACAAAGTGGAGTCTTAGTCATTTTTTATTATACCTTCTAGGGGCCTCGACTTTTGGAGTCATTTGTTCGACGTTTGGGGATTCTATTGACATGGCTAATTTAGGGCATGACTCTAATATCATGTTAGATGAACACGACTCTCCACAATAGTATGATATAGTCCACTTTGAGCATAGGGCATGGCTCTGATACCATGTTAGATGAACACGACTCTCCACAATAGTATGATATAGTCCACTTTGAGCATAAACTCTCATGGCTTTGTTTTAGGCTTCCCCAAAATGCCCCACACCAATGGAGAGAGTATTCTTGGGTTTATAAACCCATGATCATTCTCTAAATTAGCTACGTGAGACTTTCATCCAATAGGGAAATTGTTTGATGAGTGTTTTTGTTTTCAAAACTTCTCATGATTGTCGTGAGCGTTGAAATCTGGATGAGTTGATCTATGTAAAGATTCGAAAAGTTGTATGGTGCGTGTTCTTGTTTTTGAAATATCTCATAAAAGTTAAAAGAATATTTTGAAAGCAGATTCCAAACAAGATGTTGTGTTTTATGTTCTTGATTTGCTTTCTTATGTTCATATACTCCTCTTTATTTTCGACTCGTAACATGAATCGGGAAACCTAAACCTTAAACACTCGAGTGAATTTGAATGGTTACAGCTCCCGTGGAGAAGGCTATAAGAGTTGTGGTGATCAAAGAGATCAAAGGGGCACAATATGGGTTGCAGTTGGAGAATGCAGTTAGGGATAGATTGGCTGCCGATGACAAATACGAGGAAGAAGAGGAAGCTCAGCTGGAAAAAGTTGTTGAATTCTTTCGGTCCAAATACTTGAGCTCCCATTCTGTTATAAGTTTCCATTTCCCATCAGCTCCGACCATAGCTGAGGTAACAAACTTCAACTAAACCCGAACAATTAGATTGGATCACATAGTTTCTGAAAAATTGTATGTTTTATATTCGTTGCAGATTGAGTTTTCGAGCAATGAGAAAGAGGGGTCGAAGATGAAAGTAGAGAATGGGAATGTGGTTGAGATGATTAAGAAATGGTACCTGGGAGGGACCAGAGGTGCGTCTCAAACAACCATATCTTCATTGGCTAAGAATCTTGCCATTGAGTTATCTAAATGAACCCAATTGCCTGCCCCTCTACATAGCTTTGGAGTGCTAGCTCAATGCTTATTAATGGTGCTTTCTATGCTTTGCTAATCCTTCTTCTTGAAGAACTATCACATTTCTAGTACA CAGCAGCAAAATTAAAGCGCCAGACCAAACAAGTCGCGGCCCGTGTCCTTTCTGCGCTACCTACTCTGCTCTGCCTCGGCATAGACATCGACATCGACATCGACGGAGTCCTATTTATAGCGTCTAATTCCAACTCCATGATCTCACATCCTTCACCGTCAAGCCTATTACCGCTCTGCTGCTGAAGAACTAACTTCCTTTCGTTTCTTCATCTGTTTTCCTTTCCCATCACGATCGCGATCATGGGGAGTGAAGTGGAAGTGGTAGCGGACATTGCTTTCCCTAACCAGATCGTTAAGAACAAGCCGTTGTCTCTGTTGGGTCATGGAATTATCGACCTCGAGATTCACTTTCTACAAATAAAATTCACGGCCATTGGAGTTTATCTGGAGCCTGCGATTGTGGAGCATTTGAAGCAATGGAAGGGAAAAGCCGCTGAGGACTTGCTGAAAGATGATGACTTCTTTGAGGCCATTGTTTCTGCTCCCGTGGAGAAGGCTATAAGAGTTGTGGTGATCAAAGAGATCAAAGGGGCACAATATGGGTTGCAGTTGGAGAATGCAGTTAGGGATAGATTGGCTGCCGATGACAAATACGAGGAAGAAGAGGAAGCTCAGCTGGAAAAAGTTGTTGAATTCTTTCGGTCCAAATACTTGAGCTCCCATTCTGTTATAAGTTTCCATTTCCCATCAGCTCCGACCATAGCTGAGATTGAGTTTTCGAGCAATGAGAAAGAGGGGTCGAAGATGAAAGTAGAGAATGGGAATGTGGTTGAGATGATTAAGAAATGGTACCTGGGAGGGACCAGAGGTGCGTCTCAAACAACCATATCTTCATTGGCTAAGAATCTTGCCATTGAGTTATCTAAATGAACCCAATTGCCTGCCCCTCTACATAGCTTTGGAGTGCTAGCTCAATGCTTATTAATGGTGCTTTCTATGCTTTGCTAATCCTTCTTCTTGAAGAACTATCACATTTCTAGTACA ATGGGGAGTGAAGTGGAAGTGGTAGCGGACATTGCTTTCCCTAACCAGATCGTTAAGAACAAGCCGTTGTCTCTGTTGGGTCATGGAATTATCGACCTCGAGATTCACTTTCTACAAATAAAATTCACGGCCATTGGAGTTTATCTGGAGCCTGCGATTGTGGAGCATTTGAAGCAATGGAAGGGAAAAGCCGCTGAGGACTTGCTGAAAGATGATGACTTCTTTGAGGCCATTGTTTCTGCTCCCGTGGAGAAGGCTATAAGAGTTGTGGTGATCAAAGAGATCAAAGGGGCACAATATGGGTTGCAGTTGGAGAATGCAGTTAGGGATAGATTGGCTGCCGATGACAAATACGAGGAAGAAGAGGAAGCTCAGCTGGAAAAAGTTGTTGAATTCTTTCGGTCCAAATACTTGAGCTCCCATTCTGTTATAAGTTTCCATTTCCCATCAGCTCCGACCATAGCTGAGATTGAGTTTTCGAGCAATGAGAAAGAGGGGTCGAAGATGAAAGTAGAGAATGGGAATGTGGTTGAGATGATTAAGAAATGGTACCTGGGAGGGACCAGAGGTGCGTCTCAAACAACCATATCTTCATTGGCTAAGAATCTTGCCATTGAGTTATCTAAATGA MGSEVEVVADIAFPNQIVKNKPLSLLGHGIIDLEIHFLQIKFTAIGVYLEPAIVEHLKQWKGKAAEDLLKDDDFFEAIVSAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEEEEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFSSNEKEGSKMKVENGNVVEMIKKWYLGGTRGASQTTISSLAKNLAIELSK
BLAST of Carg00166 vs. NCBI nr
Match: XP_022943122.1 (probable chalcone--flavonone isomerase 3 [Cucurbita moschata]) HSP 1 Score: 395.2 bits (1014), Expect = 1.4e-106 Identity = 206/209 (98.56%), Postives = 207/209 (99.04%), Query Frame = 0
BLAST of Carg00166 vs. NCBI nr
Match: XP_023527694.1 (probable chalcone--flavonone isomerase 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 387.1 bits (993), Expect = 3.8e-104 Identity = 202/209 (96.65%), Postives = 204/209 (97.61%), Query Frame = 0
BLAST of Carg00166 vs. NCBI nr
Match: XP_022992837.1 (probable chalcone--flavonone isomerase 3 [Cucurbita maxima]) HSP 1 Score: 379.8 bits (974), Expect = 6.0e-102 Identity = 196/209 (93.78%), Postives = 202/209 (96.65%), Query Frame = 0
BLAST of Carg00166 vs. NCBI nr
Match: XP_008456952.1 (PREDICTED: probable chalcone--flavonone isomerase 3 [Cucumis melo]) HSP 1 Score: 348.2 bits (892), Expect = 1.9e-92 Identity = 176/209 (84.21%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of Carg00166 vs. NCBI nr
Match: XP_011655047.1 (PREDICTED: probable chalcone--flavonone isomerase 3 isoform X1 [Cucumis sativus] >KGN50734.1 hypothetical protein Csa_5G221960 [Cucumis sativus]) HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91 Identity = 176/209 (84.21%), Postives = 194/209 (92.82%), Query Frame = 0
BLAST of Carg00166 vs. TAIR10
Match: AT5G05270.1 (Chalcone-flavanone isomerase family protein) HSP 1 Score: 253.1 bits (645), Expect = 1.5e-67 Identity = 127/209 (60.77%), Postives = 165/209 (78.95%), Query Frame = 0
BLAST of Carg00166 vs. Swiss-Prot
Match: sp|Q8VZW3|CFI3_ARATH (Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana OX=3702 GN=CHI3 PE=1 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 2.8e-66 Identity = 127/209 (60.77%), Postives = 165/209 (78.95%), Query Frame = 0
BLAST of Carg00166 vs. Swiss-Prot
Match: sp|Q3Y4F4|CFI_CANGE (Chalcone--flavonone isomerase OS=Canna generalis OX=341692 GN=CHI PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13 Identity = 61/175 (34.86%), Postives = 83/175 (47.43%), Query Frame = 0
BLAST of Carg00166 vs. Swiss-Prot
Match: sp|Q6BEH3|CFI_EUSER (Chalcone--flavonone isomerase OS=Eustoma exaltatum subsp. russellianum OX=52518 GN=CHI PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.6e-13 Identity = 65/207 (31.40%), Postives = 101/207 (48.79%), Query Frame = 0
BLAST of Carg00166 vs. Swiss-Prot
Match: sp|Q565D8|CFI_GENTR (Chalcone--flavonone isomerase OS=Gentiana triflora OX=55190 GN=CHI PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.1e-13 Identity = 61/188 (32.45%), Postives = 96/188 (51.06%), Query Frame = 0
BLAST of Carg00166 vs. Swiss-Prot
Match: sp|Q45QI7|CFI_CAMSI (Chalcone--flavonone isomerase OS=Camellia sinensis OX=4442 GN=CHI PE=2 SV=2) HSP 1 Score: 75.5 bits (184), Expect = 7.9e-13 Identity = 60/187 (32.09%), Postives = 87/187 (46.52%), Query Frame = 0
BLAST of Carg00166 vs. TrEMBL
Match: tr|A0A1S3C525|A0A1S3C525_CUCME (Chalcone-flavonone isomerase family protein OS=Cucumis melo OX=3656 GN=LOC103496746 PE=3 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 1.3e-92 Identity = 176/209 (84.21%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of Carg00166 vs. TrEMBL
Match: tr|A0A0A0KPA3|A0A0A0KPA3_CUCSA (Chalcone-flavonone isomerase family protein OS=Cucumis sativus OX=3659 GN=Csa_5G221960 PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 1.1e-91 Identity = 176/209 (84.21%), Postives = 194/209 (92.82%), Query Frame = 0
BLAST of Carg00166 vs. TrEMBL
Match: tr|H6SV47|H6SV47_PRUPE (Chalcone-flavonone isomerase family protein OS=Prunus persica OX=3760 GN=CHI PE=2 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 8.3e-76 Identity = 146/209 (69.86%), Postives = 172/209 (82.30%), Query Frame = 0
BLAST of Carg00166 vs. TrEMBL
Match: tr|A0A2I4GGG3|A0A2I4GGG3_9ROSI (Chalcone-flavonone isomerase family protein OS=Juglans regia OX=51240 GN=LOC109007666 PE=3 SV=1) HSP 1 Score: 292.0 bits (746), Expect = 1.1e-75 Identity = 148/209 (70.81%), Postives = 176/209 (84.21%), Query Frame = 0
BLAST of Carg00166 vs. TrEMBL
Match: tr|V5M2Y0|V5M2Y0_PHYEB (Chalcone-flavonone isomerase family protein OS=Phyllanthus emblica OX=296036 PE=2 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.4e-75 Identity = 147/209 (70.33%), Postives = 171/209 (81.82%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |