CsGy5G008780 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy5G008780
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Chalcone-flavonone isomerase family protein
Location	Chr5 : 6817782 .. 6821302 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGTTAAAAGATTTTTTTTAGCCATTAGAAAAACGGTTACATATAAAACAAACAAACGTAGAGATACTGAAAGTTTTAGAAAGGGAAAAGCAAGAATTAAAGCACCAAACCAAACTCTTCAGCTGTGTGTGTATCGTCCTCTCTACCAACCTACTCTGCCTCCGCATTGATAAATGACAGAGCTCTATATATGGCCTCAATTACCAAGCTTAAAATCCCATCTCCTTCACCGGCGACCCTATTTTCTCTCTCCCTCTCAACGTCTTCCTTTCCTTCTCCCTCGCCGATCAGTAACCTCTTCTTTCCCCTTTCCTCTATTAAATGCACACCAATTTTTGTTCTCGTTTTTATGCTTATCAACTGTTTCTGTAAATGTCTCATTGAAAACCCACATGCCATTTCATTCTAATTTGTCTCTCCGCTCTCAAAATTGGGCCTTTTGTATGTGTTTATGGCCTTCGGAATTGCATGGTTTTCTTTCCTTTACTCTTAAAGACACAGCAATTTTTGTTCTTGTTTTTATGAATATCCACTGTTTGTGTCAATGTCTCAAAGAATACTCGCATGTGATTTCACTCTAATTTATCTCTCTGCTCCCAGATTGGGGGATTTTTATGCGTTTATGGCCTTTGAAATTCGAAGTGATTGATGGATTTGTTGGGGTTTTGTTTGATTTTGTGTGAATTGGCTGATGGTTTTGTTTTGTGTTGGGTGTTTGGAAAACCTTGTGAGCAGTGGGAAGTGAAGTGGAAGTGGTAGCAGACATTGATTTCCCAAAGCAGATCGTTAAGGCCAAGCCGTTATCTCTGTTGGGTCATGGTGAGTTGAGTTCATCCTCCTTTCATTTCACTTTTTTTTCTCTCCTTTCTCTAAATTACAATATGTAATATATATGTCACTTTTTGTAAAAAAAAAAATCTTTCTTATAATGAACCATTTAATGAATAAAATTTGGTTTGTATTTTGATTTAGTTACTCTAATTTCAAATTTTGTAACAATTTAAATCCAAATGACTAAATCATTACAAAATTGAAGAAATTGAAAGTATATGATCAACTAAATCATCACAAAATCAAAATCTTAGGAACTAAATTGTTACTTTCGTATAACTTTAGAAACTAACATACTTTCTATATTATCATATATTATAAGTTAAGATATCGTGTTATGCAAAACAATGAATATTCAAAAAGTTTTAACACAAACTTGTTCATAAATTTATTTAATTAATAATAATTTATATTTAACTTAATACAGTGAGTAACTAACATTAGTTGAAATGTGATAGTTTTAATTTTGATTGATGTGTATGGGATATACATATATATATATATGTGTGTGTGTGTATGTAACAGGAAGTACAGAGATAGAGATTCACTTTCTAGAAATAAAGTTGACTGCGATTGGAGTTTATTTGGAGCCTTCAATTGTGGAGCATTTGCAACAATGGAAGGGAAAAGCTGCTAAGGACTTGGAGGAAGACGATGACTTCTTTCAGGCTATTATTTCTGGTATCTCCCTAATCATCCTATTTAACTGTGTCCCATTATGTGAAGAACTTGACCATTTGTTCAAACATATTTCATTCTTAGATGATAATGTTTCATATCTATCATGTTCATATACTACTCATCATGTGTGCCAAGGACTACTTAGATCCATTTGAACATATTCCATTTTTAGATCATAATGTTGCATATCTATCATGTTCATATACTACCTCGTTGAATTTCTCATGTTCTATATATATATATATAATAAGTGTAGTTGAGTAGACAGAGGAAGAATATTATGAGCTTCAAAGTCAAAGATTTGATTTTCATCTAACATACTTAAAAAAAAATGAAAGCGTATCTAAATATACTATTTTGTCAATATACTTTAAAGTTAAAAGCAAAATGTAAAATTATTATAAATTAACTTCATAGATTCCAAAAACATATATTAAATTAAGTTTAAATTATATAACTAACACCTTTCAATTTTGTCACTTGTTTAAAAAATATCTTTTATCATTTCAAAAATGGTAAAATGAGTCCTAATTTTTCATAAATATAAGATAATTCCTTTAGAATTTCGAACATGTATTAAATGTTGTATGTTTTGTTCTACGTCACTGTTACCACTTTATTTCATCTACCATTCTGAAAATTTATACTCTAAAAGTACTTTTGGAGCGTTCTAAATTTTCAATGAAAATATATATTGCGACTTTTGAAAGTATAGAAAATAGATAGATATAAGAAGATTTCAAACTTGTGAGGTTTTGTACTCAAAACAAGAGGACATTGTGTATCAAGTTAATTATCGAATATTTCTCCCAAAATCTCAACTCATAACTTGAACTGGGAAAAGCTAAACTCTAACCCTTAAATGCTTCAATTCAAATGGTGACAGCTCCAGTGGAGAAGGTTATAAGAGTAGTGGTGATCAAAGAGATCAAAGGGTCACAATATGGAGTGCAGTTGGAGAGTGCAGTTAGGGATAGATTGGCAGCTGATGACAAATATGAAGATGAAGAGGAAGCTCAGTTGGAAAAAATTGTTGAATTTTTTCAGTCCAAATATCTGAAGACACATTCTGTTATAAACTTCCATTTCCCACCAGCTTCAACCATTGCTGAGGTAACTAACTTCTCTAAGAGATTATCATTTTATTTTTGTTTATTTTCTTAATTTTGTTTTAATTACAAATTTGGTTACGTTATTTAGAAAATGTTAGAGTTTTGTTTGATTAAATCTAATCAATAGTCCCGTTCCTATTATATAAATTATTATTTATCCGTTTAGTTCATACATTTTGAGGTGTTTAATTGACTTTTAAAGTTTAAAAGGCGTCTAATAAGTTGTTAGTAGACAAGGAAGTATGGAATGATTTTGTTCCGCGTTAGCTAGAATGGAACTCCAAATAGTTGGCTTTTGAGGTGCGATTCTGGGGAGTATCTAAAACATGTGTTTGAACTTTCAATTTGTGTTGAATGAAATTCAAGTAACAATTAATTGTTTCCATAGTGCATATAGTTTGTAAAAGAGTATATCTGATATATATATATATATATTTGTTACATGGAATTTGCAGATAGAGTTTTCAAGTGATGAGAAAGAGGAGTCAAAGATGAAAGTTGAGAATGGAAATGTGGTTGAAATGATTAAGAAATGGTACTTGGGTGGGACTAGAGGTGTGTCTCAACCAACCATATCATCATTGGCTAACAATCTTGCCATTGAATTATCTAAATGAACCCTAAACCCCACCTTTGAACTTCTTTTGCACAATGCTTGCTTTTTTTCTTTCTTTTCTTAATTACTGTAACAGTGGTTACTGTTGAAGTGGTGAGCTTAGGTTTTGAATAATATTTGAACTCTTGGTTGAAGATGTATGCTTAAGTAGTATTTTTTTTTTAATTAAGCTAATATTTCAAATATTTATTTAAGAAAGATGAAACTATAGTAAAGAAGTTATGAGGGACACTTGCAAAAAGAAAAAAAAAAAAAGCAAAACAAGTTATAATAATTAAA

mRNA sequence

TAAAGTTAAAAGATTTTTTTTAGCCATTAGAAAAACGGTTACATATAAAACAAACAAACGTAGAGATACTGAAAGTTTTAGAAAGGGAAAAGCAAGAATTAAAGCACCAAACCAAACTCTTCAGCTGTGTGTGTATCGTCCTCTCTACCAACCTACTCTGCCTCCGCATTGATAAATGACAGAGCTCTATATATGGCCTCAATTACCAAGCTTAAAATCCCATCTCCTTCACCGGCGACCCTATTTTCTCTCTCCCTCTCAACGTCTTCCTTTCCTTCTCCCTCGCCGATCATGGGAAGTGAAGTGGAAGTGGTAGCAGACATTGATTTCCCAAAGCAGATCGTTAAGGCCAAGCCGTTATCTCTGTTGGGTCATGCTCCAGTGGAGAAGGTTATAAGAGTAGTGGTGATCAAAGAGATCAAAGGGTCACAATATGGAGTGCAGTTGGAGAGTGCAGTTAGGGATAGATTGGCAGCTGATGACAAATATGAAGATGAAGAGGAAGCTCAGTTGGAAAAAATTGTTGAATTTTTTCAGTCCAAATATCTGAAGACACATTCTGTTATAAACTTCCATTTCCCACCAGCTTCAACCATTGCTGAGATAGAGTTTTCAAGTGATGAGAAAGAGGAGTCAAAGATGAAAGTTGAGAATGGAAATGTGGTTGAAATGATTAAGAAATGGTACTTGGGTGGGACTAGAGGTGTGTCTCAACCAACCATATCATCATTGGCTAACAATCTTGCCATTGAATTATCTAAATGAACCCTAAACCCCACCTTTGAACTTCTTTTGCACAATGCTTGCTTTTTTTCTTTCTTTTCTTAATTACTGTAACAGTGGTTACTGTTGAAGTGGTGAGCTTAGGTTTTGAATAATATTTGAACTCTTGGTTGAAGATGTATGCTTAAGTAGTATTTTTTTTTTAATTAAGCTAATATTTCAAATATTTATTTAAGAAAGATGAAACTATAGTAAAGAAGTTATGAGGGACACTTGCAAAAAGAAAAAAAAAAAAAGCAAAACAAGTTATAATAATTAAA

Coding sequence (CDS)

ATGGCCTCAATTACCAAGCTTAAAATCCCATCTCCTTCACCGGCGACCCTATTTTCTCTCTCCCTCTCAACGTCTTCCTTTCCTTCTCCCTCGCCGATCATGGGAAGTGAAGTGGAAGTGGTAGCAGACATTGATTTCCCAAAGCAGATCGTTAAGGCCAAGCCGTTATCTCTGTTGGGTCATGCTCCAGTGGAGAAGGTTATAAGAGTAGTGGTGATCAAAGAGATCAAAGGGTCACAATATGGAGTGCAGTTGGAGAGTGCAGTTAGGGATAGATTGGCAGCTGATGACAAATATGAAGATGAAGAGGAAGCTCAGTTGGAAAAAATTGTTGAATTTTTTCAGTCCAAATATCTGAAGACACATTCTGTTATAAACTTCCATTTCCCACCAGCTTCAACCATTGCTGAGATAGAGTTTTCAAGTGATGAGAAAGAGGAGTCAAAGATGAAAGTTGAGAATGGAAATGTGGTTGAAATGATTAAGAAATGGTACTTGGGTGGGACTAGAGGTGTGTCTCAACCAACCATATCATCATTGGCTAACAATCTTGCCATTGAATTATCTAAATGA

Protein sequence

MASITKLKIPSPSPATLFSLSLSTSSFPSPSPIMGSEVEVVADIDFPKQIVKAKPLSLLGHAPVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIELSK

Homology

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BLAST of CsGy5G008780 vs. NCBI nr
Match: XP_011655047.1 (PREDICTED: probable chalcone--flavonone isomerase 3 isoform X1 [Cucumis sativus] >KGN50734.1 hypothetical protein Csa_5G221960 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 1.7e-71
Identity = 190/242 (78.51%), Postives = 190/242 (78.51%), Query Frame = 0


Query: 1   MASITKLXXXXXXXXXXXXXXXXXXXXXXXXXXMGSEVEVVADIDFPKQIVKAKPLSLLG 60
           MASITKLXXXXXXXXXXXXXXXXXXXXXXXXXXMGSEVEVVADIDFPKQIVKAKPLSLLG
Sbjct: 1   MASITKLXXXXXXXXXXXXXXXXXXXXXXXXXXMGSEVEVVADIDFPKQIVKAKPLSLLG 60

Query: 61  H----------------------------------------------------APVEKVI 120
           H                                                    APVEKVI
Sbjct: 61  HGSTEIEIHFLEIKLTAIGVYLEPSIVEHLQQWKGKAAKDLEEDDDFFQAIISAPVEKVI 120

Query: 121 RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH 180
           RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH
Sbjct: 121 RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH 180

Query: 181 FPPASTIAEIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL 191
           FPPASTIAEIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL
Sbjct: 181 FPPASTIAEIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL 240

[Close]

BLAST of CsGy5G008780 vs. NCBI nr
Match: XP_011655048.1 (PREDICTED: probable chalcone--flavonone isomerase 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-70
Identity = 156/209 (74.64%), Postives = 157/209 (75.12%), Query Frame = 0


Query: 34  MGSEVEVVADIDFPKQIVKAKPLSLLGH-------------------------------- 93
           +GSEVEVVADIDFPKQIVKAKPLSLLGH                                
Sbjct: 17  LGSEVEVVADIDFPKQIVKAKPLSLLGHGSTEIEIHFLEIKLTAIGVYLEPSIVEHLQQW 76

Query: 94  --------------------APVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYED 153
                               APVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYED
Sbjct: 77  KGKAAKDLEEDDDFFQAIISAPVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYED 136

Query: 154 EEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEMI 191
           EEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEMI
Sbjct: 137 EEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEMI 196

[Close]

BLAST of CsGy5G008780 vs. NCBI nr
Match: XP_008456952.1 (PREDICTED: probable chalcone--flavonone isomerase 3 [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 3.2e-70
Identity = 162/242 (66.94%), Postives = 163/242 (67.36%), Query Frame = 0


Query: 1   MASITKLXXXXXXXXXXXXXXXXXXXXXXXXXXMGSEVEVVADIDFPKQIVKAKPLSLLG 60
           MASITKL                          MGSEVEVVADI FPKQIVKAKPLSLLG
Sbjct: 1   MASITKLKIPSPSPVTLFSLSRSTSSFLSPSPIMGSEVEVVADIAFPKQIVKAKPLSLLG 60

Query: 61  H----------------------------------------------------APVEKVI 120
           H                                                    APVEKVI
Sbjct: 61  HGTTEIEIHFLEIKLTAIGVYLEPSVVEHLQQWKGKAAKDLVEDDDFFQAIVSAPVEKVI 120

Query: 121 RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH 180
           RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH
Sbjct: 121 RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH 180

Query: 181 FPPASTIAEIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL 191
           FPPASTIA+IEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL
Sbjct: 181 FPPASTIAQIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL 240

[Close]

BLAST of CsGy5G008780 vs. NCBI nr
Match: XP_022943122.1 (probable chalcone--flavonone isomerase 3 [Cucurbita moschata])

HSP 1 Score: 238.0 bits (606), Expect = 2.6e-59
Identity = 137/209 (65.55%), Postives = 145/209 (69.38%), Query Frame = 0


Query: 34  MGSEVEVVADIDFPKQIVKAKPLSLLGH-------------------------------- 93
           MGSEVEVVADI FP QIVK KPLSLLGH                                
Sbjct: 1   MGSEVEVVADIAFPNQIVKNKPLSLLGHGIIDLEIHFLQIKFTAIGVYLEPAIVEHLKQW 60

Query: 94  --------------------APVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYED 153
                               APVEK IRVVVIKEIKG+QYG+QLE+AVRDRLAADDKYE+
Sbjct: 61  KGNAAEDLLKDDDFFEAIVSAPVEKAIRVVVIKEIKGAQYGLQLENAVRDRLAADDKYEE 120

Query: 154 EEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEMI 191
           EEEAQLEK+VEFF+SKYL +HSVI+FHFP A TIAEIEF SDEKE SKMKVENGNVVEMI
Sbjct: 121 EEEAQLEKVVEFFRSKYLSSHSVISFHFPSAPTIAEIEFLSDEKEGSKMKVENGNVVEMI 180

[Close]

BLAST of CsGy5G008780 vs. NCBI nr
Match: XP_022992837.1 (probable chalcone--flavonone isomerase 3 [Cucurbita maxima])

HSP 1 Score: 238.0 bits (606), Expect = 2.6e-59
Identity = 137/209 (65.55%), Postives = 145/209 (69.38%), Query Frame = 0


Query: 34  MGSEVEVVADIDFPKQIVKAKPLSLLGH-------------------------------- 93
           MGSEVEVVADI FPKQIVK KPLSLLGH                                
Sbjct: 1   MGSEVEVVADIAFPKQIVKNKPLSLLGHGIIDLEIHFLQIKFTAIGVYLEPAIVEHLKQW 60

Query: 94  --------------------APVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYED 153
                               APVEK +RV VIKEIKG+QY +QLE+AVRDRLAADDKYE+
Sbjct: 61  EGKAAEGLLKDDDFFEAIVSAPVEKAVRVAVIKEIKGAQYALQLENAVRDRLAADDKYEE 120

Query: 154 EEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEMI 191
           EEEAQLEKIVEFF+SKYL  HSVI+FHFP A TIAEIEFSSD KE SKMKVENGNVVEMI
Sbjct: 121 EEEAQLEKIVEFFRSKYLSAHSVISFHFPSAPTIAEIEFSSDGKEGSKMKVENGNVVEMI 180

[Close]

BLAST of CsGy5G008780 vs. TAIR10
Match: AT5G05270.1 (Chalcone-flavanone isomerase family protein)

HSP 1 Score: 164.1 bits (414), Expect = 8.5e-41
Identity = 95/209 (45.45%), Postives = 124/209 (59.33%), Query Frame = 0


Query: 34  MGSEVEVVADIDFPKQIVKAKPLSLLGH-------------------------------- 93
           MG+E+ +V ++ FP QI+ +KPLSLLG                                 
Sbjct: 1   MGTEMVMVHEVPFPPQIITSKPLSLLGQGITDIEIHFLQVKFTAIGVYLDPSDVKTHLDN 60

Query: 94  ---------------------APVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYE 153
                                A +EKVIRVVVIKEIKG+QYGVQLE+ VRDRLA +DKYE
Sbjct: 61  WKGKTGKELAGDDDFFDALASAEMEKVIRVVVIKEIKGAQYGVQLENTVRDRLAEEDKYE 120

Query: 154 DEEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEM 190
           +EEE +LEK+V FFQSKY K +SVI +HF     I EI F ++ KEE K+KVEN NVV M
Sbjct: 121 EEEETELEKVVGFFQSKYFKANSVITYHFSAKDGICEIGFETEGKEEEKLKVENANVVGM 180

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BLAST of CsGy5G008780 vs. Swiss-Prot
Match: sp|Q8VZW3|CFI3_ARATH (Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana OX=3702 GN=CHI3 PE=1 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-39
Identity = 95/209 (45.45%), Postives = 124/209 (59.33%), Query Frame = 0


Query: 34  MGSEVEVVADIDFPKQIVKAKPLSLLGH-------------------------------- 93
           MG+E+ +V ++ FP QI+ +KPLSLLG                                 
Sbjct: 1   MGTEMVMVHEVPFPPQIITSKPLSLLGQGITDIEIHFLQVKFTAIGVYLDPSDVKTHLDN 60

Query: 94  ---------------------APVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYE 153
                                A +EKVIRVVVIKEIKG+QYGVQLE+ VRDRLA +DKYE
Sbjct: 61  WKGKTGKELAGDDDFFDALASAEMEKVIRVVVIKEIKGAQYGVQLENTVRDRLAEEDKYE 120

Query: 154 DEEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEM 190
           +EEE +LEK+V FFQSKY K +SVI +HF     I EI F ++ KEE K+KVEN NVV M
Sbjct: 121 EEEETELEKVVGFFQSKYFKANSVITYHFSAKDGICEIGFETEGKEEEKLKVENANVVGM 180

[Close]

BLAST of CsGy5G008780 vs. TrEMBL
Match: tr|A0A0A0KPA3|A0A0A0KPA3_CUCSA (Chalcone-flavonone isomerase family protein OS=Cucumis sativus OX=3659 GN=Csa_5G221960 PE=3 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.1e-71
Identity = 190/242 (78.51%), Postives = 190/242 (78.51%), Query Frame = 0


Query: 1   MASITKLXXXXXXXXXXXXXXXXXXXXXXXXXXMGSEVEVVADIDFPKQIVKAKPLSLLG 60
           MASITKLXXXXXXXXXXXXXXXXXXXXXXXXXXMGSEVEVVADIDFPKQIVKAKPLSLLG
Sbjct: 1   MASITKLXXXXXXXXXXXXXXXXXXXXXXXXXXMGSEVEVVADIDFPKQIVKAKPLSLLG 60

Query: 61  H----------------------------------------------------APVEKVI 120
           H                                                    APVEKVI
Sbjct: 61  HGSTEIEIHFLEIKLTAIGVYLEPSIVEHLQQWKGKAAKDLEEDDDFFQAIISAPVEKVI 120

Query: 121 RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH 180
           RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH
Sbjct: 121 RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH 180

Query: 181 FPPASTIAEIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL 191
           FPPASTIAEIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL
Sbjct: 181 FPPASTIAEIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL 240

[Close]

BLAST of CsGy5G008780 vs. TrEMBL
Match: tr|A0A1S3C525|A0A1S3C525_CUCME (Chalcone-flavonone isomerase family protein OS=Cucumis melo OX=3656 GN=LOC103496746 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.1e-70
Identity = 162/242 (66.94%), Postives = 163/242 (67.36%), Query Frame = 0


Query: 1   MASITKLXXXXXXXXXXXXXXXXXXXXXXXXXXMGSEVEVVADIDFPKQIVKAKPLSLLG 60
           MASITKL                          MGSEVEVVADI FPKQIVKAKPLSLLG
Sbjct: 1   MASITKLKIPSPSPVTLFSLSRSTSSFLSPSPIMGSEVEVVADIAFPKQIVKAKPLSLLG 60

Query: 61  H----------------------------------------------------APVEKVI 120
           H                                                    APVEKVI
Sbjct: 61  HGTTEIEIHFLEIKLTAIGVYLEPSVVEHLQQWKGKAAKDLVEDDDFFQAIVSAPVEKVI 120

Query: 121 RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH 180
           RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH
Sbjct: 121 RVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVEFFQSKYLKTHSVINFH 180

Query: 181 FPPASTIAEIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL 191
           FPPASTIA+IEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL
Sbjct: 181 FPPASTIAQIEFSSDEKEESKMKVENGNVVEMIKKWYLGGTRGVSQPTISSLANNLAIEL 240

[Close]

BLAST of CsGy5G008780 vs. TrEMBL
Match: tr|H6SV47|H6SV47_PRUPE (Chalcone-flavonone isomerase family protein OS=Prunus persica OX=3760 GN=CHI PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.9e-49
Identity = 119/209 (56.94%), Postives = 129/209 (61.72%), Query Frame = 0


Query: 34  MGSEVEVVADIDFPKQIVKAKPLSLLGH-------------------------------- 93
           MG+EV +V D+ FP QI   KPLSLLGH                                
Sbjct: 1   MGTEVVLVDDVPFPSQITTTKPLSLLGHGITDIEIHFLQIKFTAIGVYLDPEVVSHLQQW 60

Query: 94  --------------------APVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYED 153
                               APVEK +RVVVIKEIKGSQYGVQLESAVRDRLAADDKYE+
Sbjct: 61  KTKKANELAEDDDFFDALISAPVEKFLRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEE 120

Query: 154 EEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEMI 191
           EEE  LEKIVEFFQSKY K  S I FHFP  S  AEI F ++ KEESK+KVEN NVVE I
Sbjct: 121 EEEEALEKIVEFFQSKYFKKDSTITFHFPATSATAEISFHTEGKEESKIKVENANVVENI 180

[Close]

BLAST of CsGy5G008780 vs. TrEMBL
Match: tr|A0A2U1PUT6|A0A2U1PUT6_ARTAN (Enhancer of flavonoid production OS=Artemisia annua OX=35608 GN=CTI12_AA110000 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48
Identity = 119/210 (56.67%), Postives = 133/210 (63.33%), Query Frame = 0


Query: 34  MGSEVEVVADIDFPKQIVKAKPLSLLGH-------------------------------- 93
           MGSE+ +V DI FP QI  +KPLSLLGH                                
Sbjct: 1   MGSEMVMVDDISFPSQITTSKPLSLLGHGITDIEIHFLQIKFTAIGVYIDTEIVSHLQKW 60

Query: 94  --------------------APVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYED 153
                               APV+K +R+VVIKEIKGSQYGVQLES+VRDRLAADDKYE+
Sbjct: 61  KGKSGTELAEDDDFFDSVISAPVDKYLRIVVIKEIKGSQYGVQLESSVRDRLAADDKYEE 120

Query: 154 EEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESK-MKVENGNVVEM 191
           EEE  LEKIVEFFQ+KY K  SV+ F FP AS +AEI FSSDEKEE K MKVENGNVV+M
Sbjct: 121 EEEEALEKIVEFFQTKYFKKDSVLTFSFPAASNVAEIGFSSDEKEEPKTMKVENGNVVDM 180

[Close]

BLAST of CsGy5G008780 vs. TrEMBL
Match: tr|A0A2K9R8V1|A0A2K9R8V1_9ERIC (Chalcone-flavonone isomerase family protein OS=Camellia fraterna OX=542725 GN=CHI PE=2 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.0e-48
Identity = 116/209 (55.50%), Postives = 133/209 (63.64%), Query Frame = 0


Query: 34  MGSEVEVVADIDFPKQIVKAKPLSLLGH-------------------------------- 93
           MGSE+ +V +I FP Q+   KPLSLLGH                                
Sbjct: 1   MGSEMVMVDEIPFPPQVTTTKPLSLLGHGITDIEIHFLQIKFTAIGVYLDSEIVGHLQQW 60

Query: 94  --------------------APVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYED 153
                               APVEK +RVVVIKEIKGSQYGVQLESAVRDRLAADDKYED
Sbjct: 61  KGKTGKDLAEDDDFFEALISAPVEKFLRVVVIKEIKGSQYGVQLESAVRDRLAADDKYED 120

Query: 154 EEEAQLEKIVEFFQSKYLKTHSVINFHFPPASTIAEIEFSSDEKEESKMKVENGNVVEMI 191
           EEEA LE++VEFFQSKY K  SV+ FHFP +S  AEI F+++ KEESK++VEN NVVEMI
Sbjct: 121 EEEAALEQVVEFFQSKYFKKDSVVTFHFPASSGTAEIAFATEGKEESKIQVENTNVVEMI 180

The following BLAST results are available for this feature:

BLAST of CsGy5G008780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655047.1	1.7e-71	78.51	PREDICTED: probable chalcone--flavonone isomerase 3 isoform X1 [Cucumis sativus]...	[more]
XP_011655048.1	1.9e-70	74.64	PREDICTED: probable chalcone--flavonone isomerase 3 isoform X2 [Cucumis sativus]	[more]
XP_008456952.1	3.2e-70	66.94	PREDICTED: probable chalcone--flavonone isomerase 3 [Cucumis melo]	[more]
XP_022943122.1	2.6e-59	65.55	probable chalcone--flavonone isomerase 3 [Cucurbita moschata]	[more]
XP_022992837.1	2.6e-59	65.55	probable chalcone--flavonone isomerase 3 [Cucurbita maxima]	[more]

BLAST of CsGy5G008780 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05270.1	8.5e-41	45.45	Chalcone-flavanone isomerase family protein	[more]

BLAST of CsGy5G008780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VZW3\|CFI3_ARATH	1.5e-39	45.45	Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana OX=3702 GN=CHI3...	[more]

BLAST of CsGy5G008780 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KPA3\|A0A0A0KPA3_CUCSA	1.1e-71	78.51	Chalcone-flavonone isomerase family protein OS=Cucumis sativus OX=3659 GN=Csa_5G...	[more]
tr\|A0A1S3C525\|A0A1S3C525_CUCME	2.1e-70	66.94	Chalcone-flavonone isomerase family protein OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
tr\|H6SV47\|H6SV47_PRUPE	7.9e-49	56.94	Chalcone-flavonone isomerase family protein OS=Prunus persica OX=3760 GN=CHI PE=...	[more]
tr\|A0A2U1PUT6\|A0A2U1PUT6_ARTAN	1.8e-48	56.67	Enhancer of flavonoid production OS=Artemisia annua OX=35608 GN=CTI12_AA110000 P...	[more]
tr\|A0A2K9R8V1\|A0A2K9R8V1_9ERIC	3.0e-48	55.50	Chalcone-flavonone isomerase family protein OS=Camellia fraterna OX=542725 GN=CH...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016872	intramolecular lyase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR036298	Chalcone_isomerase_sf
IPR016088	Chalcone_isomerase_3-sand
IPR016089	Chalcone_isomerase_bundle_sf
IPR016087	Chalcone_isomerase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016872	intramolecular lyase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy5G008780.1	CsGy5G008780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016087	Chalcone isomerase	PFAM	PF02431	Chalcone	coord: 61..184 e-value: 3.5E-11 score: 42.8
IPR016089	Chalcone isomerase, orthogonal bundle domain superfamily	GENE3D	G3DSA:1.10.890.20		coord: 166..185 e-value: 2.2E-44 score: 153.1 coord: 61..61 e-value: 2.2E-44 score: 153.1
IPR016088	Chalcone isomerase, 3-layer sandwich	GENE3D	G3DSA:3.50.70.10		coord: 62..165 e-value: 2.2E-44 score: 153.1
None	No IPR available	PANTHER	PTHR28039:SF4	CHALCONE--FLAVONONE ISOMERASE 3-RELATED	coord: 62..190
None	No IPR available	PANTHER	PTHR28039	FAMILY NOT NAMED	coord: 62..190
IPR036298	Chalcone isomerase superfamily	SUPERFAMILY	SSF54626	Chalcone isomerase	coord: 61..189

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy5G008780	Cla007294	Watermelon (97103) v1	cgybwmB359
CsGy5G008780	Csa5G221960	Cucumber (Chinese Long) v2	cgybcuB224
CsGy5G008780	MELO3C020146	Melon (DHL92) v3.5.1	cgybmeB320
CsGy5G008780	ClCG07G005100	Watermelon (Charleston Gray)	cgybwcgB369
CsGy5G008780	CSPI05G11530	Wild cucumber (PI 183967)	cgybcpiB226
CsGy5G008780	CmaCh04G010650	Cucurbita maxima (Rimu)	cgybcmaB673
CsGy5G008780	CmoCh04G011290	Cucurbita moschata (Rifu)	cgybcmoB651
CsGy5G008780	Lsi04G010210	Bottle gourd (USVL1VR-Ls)	cgyblsiB338
CsGy5G008780	Cp4.1LG01g11950	Cucurbita pepo (Zucchini)	cgybcpeB646
CsGy5G008780	MELO3C020146.2	Melon (DHL92) v3.6.1	cgybmedB311
CsGy5G008780	CsaV3_5G010920	Cucumber (Chinese Long) v3	cgybcucB232
CsGy5G008780	Cla97C07G133440	Watermelon (97103) v2	cgybwmbB375
CsGy5G008780	Bhi07G000416	Wax gourd	cgybwgoB487
CsGy5G008780	Carg00166	Silver-seed gourd	carcgybB0670

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy5G008780	Silver-seed gourd	carcgybB0898
CsGy5G008780	Cucumber (Chinese Long) v3	cgybcucB242
CsGy5G008780	Watermelon (97103) v2	cgybwmbB347
CsGy5G008780	Cucumber (Gy14) v2	cgybcgybB145
CsGy5G008780	Cucurbita maxima (Rimu)	cgybcmaB674
CsGy5G008780	Cucurbita moschata (Rifu)	cgybcmoB652
CsGy5G008780	Cucurbita pepo (Zucchini)	cgybcpeB647