Csa3G806230 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G806230
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Growth-regulating factor 7; contains IPR014977 (WRC)
Location	Chr3 : 30833126 .. 30835180 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCCCCGGTGCAACTCACAATTAAAACCATACACACACACACACACTCCCTCACAAAAATCCCATTCCCCAAATTCTCCCCCAAGATAAGACCATCCCCCTCTAGTTACTTCTTCCTTTCCGATCACTTCCCCCGATATGCGAATCAGAAAACGCCAGCTCCCATTACCCACCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCCTCTCCCCTCCTCCGATCCTCCCATTAATCCCTTGGTTAGTATATTCATTTCCATCTACCTCCGATTTCTCTCTTCTCTTTTTCTTTTTCTTCAATTGCACCCCACGATTTCTTTACACTACTAACACACCGCCCACCCTCTTCTCAATTTTTTTTACATCTATCACTCATCATTCATTCATGGGGGTTATTCTCCCATTTTTCTCTACTGTAGGACAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGTACCCATTAACTCAAATCTCCCCCCCCTCCCTATTTCTTTCTTCCTCCAACAATTAGTAAAAAAGTTTTCTTTTTTCTTTTTTCTTTTTTATTGGTATCCAATCAGAATAGAGGGGAAAAGAAAGGGGGGCAAGTGGAAATACTGTTGGGATATTTTTTTTTATATACATATATTTCATTAGTCTATTGTGCGCTCATGGGCTCTGCATGTTCTTCTTCACTATAAATGGTCCACACCCTCCCCTTTCCTCTGATCACTTACCAGTAATTAATTGTACACTTTACATATTCTTTTTGTTTTCCTTACGATTAATTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCATTACATGAGTACCTCAGCTATGGGTTGTGATCACTTTTTCTTTTCTCTTTGGTTTTTAGGGAAACTATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCTTCCTCTTCTTCCTCTCAAGGTTAATACCTTTCTTGTCCCTTTTAATTTAACTTACTCTTTCGCTATTTGGCTACCTACTGCACTGCACCCATTTTTCATTTTTCATTTATATTATATTCTCATTTATTCAATTATACTTTTTCTGTTGTGAGATTTTGTATGTTTAATTCATATGGAAGGTCTTGTTTTGGGCTCTTTTTCTTTTTGAACTTTGTGATTGATGGTGGGAATTATATTCTTGTTTAATTTGTTTATATATATATGTGTGTGTGTTCTTGTATTAGTTGTGCTTATGTTTGATGTAGTAGGTGGTGGGAGATGGTGCGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGGAGCTTTGAGAGGTCAAGTGACGAGGATAATGACGATCACAGCAAAGATAGTGATCATCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATGAAGACGAAGATGAACAAGAAATGTACATTGTCACAGAAGCAATCTAAAGTGGGTCTAGACGCTGTTGTCGGGAAAAAGAGGTCAAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGTTGCTGCTACACCCAAGAACATCGTCGTTGTTGAGAAAGACGAGAAGAAGCCATCTCCATCTCCACCTCCATCTCCATTCCCATCATCACCACCACCTCCTTCATCATTCTCGTTGACTAGTAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCAATGAGTAGCTTGCTCGGCCAACCCGAAGCCATGGCCGTGGCAACACCGCTGTCTCCGCCATCCACGTTGCATGATGACAACATTGACAAGTAAACTACTACATCTGTTACATAGATAACAGCTTCCTGATCTTTCCCTAAATTTTCAGTTTCTGTTCTTTCGATGGTATTTGGAAAAGTTTCTATTTAGATTGTTTTTTTTGTAAAGAGTGTTAATAGGAAAAGTTGATATTATATATCATAATTGTATTGTTTTATGTATTTGGA

mRNA sequence

ATGCGAATCAGAAAACGCCAGCTCCCATTACCCACCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCCTCTCCCCTCCTCCGATCCTCCCATTAATCCCTTGGACAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGGAAACTATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCTTCCTCTTCTTCCTCTCAAGGTGGTGGGAGATGGTGCGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGGAGCTTTGAGAGGTCAAGTGACGAGGATAATGACGATCACAGCAAAGATAGTGATCATCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATGAAGACGAAGATGAACAAGAAATGTACATTGTCACAGAAGCAATCTAAAGTGGGTCTAGACGCTGTTGTCGGGAAAAAGAGGTCAAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGTTGCTGCTACACCCAAGAACATCGTCGTTGTTGAGAAAGACGAGAAGAAGCCATCTCCATCTCCACCTCCATCTCCATTCCCATCATCACCACCACCTCCTTCATCATTCTCGTTGACTAGTAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCAATGAGTAGCTTGCTCGGCCAACCCGAAGCCATGGCCGTGGCAACACCGCTGTCTCCGCCATCCACGTTGCATGATGACAACATTGACAAGTAA

Coding sequence (CDS)

ATGCGAATCAGAAAACGCCAGCTCCCATTACCCACCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCCTCTCCCCTCCTCCGATCCTCCCATTAATCCCTTGGACAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGGAAACTATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCTTCCTCTTCTTCCTCTCAAGGTGGTGGGAGATGGTGCGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGGAGCTTTGAGAGGTCAAGTGACGAGGATAATGACGATCACAGCAAAGATAGTGATCATCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATGAAGACGAAGATGAACAAGAAATGTACATTGTCACAGAAGCAATCTAAAGTGGGTCTAGACGCTGTTGTCGGGAAAAAGAGGTCAAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGTTGCTGCTACACCCAAGAACATCGTCGTTGTTGAGAAAGACGAGAAGAAGCCATCTCCATCTCCACCTCCATCTCCATTCCCATCATCACCACCACCTCCTTCATCATTCTCGTTGACTAGTAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCAATGAGTAGCTTGCTCGGCCAACCCGAAGCCATGGCCGTGGCAACACCGCTGTCTCCGCCATCCACGTTGCATGATGACAACATTGACAAGTAA

Protein sequence

MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK*

Homology

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BLAST of Csa3G806230 vs. TrEMBL
Match: A0A0A0LGX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G806230 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 3.6e-164
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60
           MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60

Query: 61  NNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQD 120
           NNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQD
Sbjct: 61  NNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQD 120

Query: 121 EKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLV 180
           EKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLV
Sbjct: 121 EKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLV 180

Query: 181 GYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPPS 240
           GYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPPS
Sbjct: 181 GYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPPS 240

Query: 241 SFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           SFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK
Sbjct: 241 SFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 289

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BLAST of Csa3G806230 vs. TrEMBL
Match: A0A0R0EMN2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G148700 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.9e-50
Identity = 127/261 (48.66%), Postives = 149/261 (57.09%), Query Frame = 1


Query: 49  SRETILIGAETINNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSK 108
           SR+    G+E     LLP  S SS+Q G RW E EKA PLKKRRG+FE +++ +   HSK
Sbjct: 127 SRKGRSFGSEKTQAELLPPLSPSSTQDG-RWYEGEKAIPLKKRRGNFEENNNNNAATHSK 186

Query: 109 DSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVG--LDA----------------VVGK 168
                        K  MKTKMNKKC+   K+  +G  LD                 +V K
Sbjct: 187 KM-----------KAKMKTKMNKKCSTRNKEDSMGEELDEEDEEEKKVEETKAEVNIVSK 246

Query: 169 KRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATP 228
           KR+RG ALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSM +VR+RS+ +  P
Sbjct: 247 KRARGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIASTAP 306

Query: 229 KNIVVVE-KDEKKPSPSPPPS-----------------PFPSSPPPPSSFSLTSKKRMKL 274
           K + V    D    S SPPPS                 PF      P    + +KKRMKL
Sbjct: 307 KEVHVHHLPDPSSSSSSPPPSFCSLDHENQIECVDNAEPFGDEEKKPE--IIMTKKRMKL 366

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BLAST of Csa3G806230 vs. TrEMBL
Match: I1N995_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.9e-50
Identity = 127/261 (48.66%), Postives = 149/261 (57.09%), Query Frame = 1


Query: 49  SRETILIGAETINNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSK 108
           SR+    G+E     LLP  S SS+Q G RW E EKA PLKKRRG+FE +++ +   HSK
Sbjct: 72  SRKGRSFGSEKTQAELLPPLSPSSTQDG-RWYEGEKAIPLKKRRGNFEENNNNNAATHSK 131

Query: 109 DSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVG--LDA----------------VVGK 168
                        K  MKTKMNKKC+   K+  +G  LD                 +V K
Sbjct: 132 KM-----------KAKMKTKMNKKCSTRNKEDSMGEELDEEDEEEKKVEETKAEVNIVSK 191

Query: 169 KRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATP 228
           KR+RG ALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSM +VR+RS+ +  P
Sbjct: 192 KRARGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIASTAP 251

Query: 229 KNIVVVE-KDEKKPSPSPPPS-----------------PFPSSPPPPSSFSLTSKKRMKL 274
           K + V    D    S SPPPS                 PF      P    + +KKRMKL
Sbjct: 252 KEVHVHHLPDPSSSSSSPPPSFCSLDHENQIECVDNAEPFGDEEKKPE--IIMTKKRMKL 311

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BLAST of Csa3G806230 vs. TrEMBL
Match: A0A0B2SMD2_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_028434 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.0e-49
Identity = 127/261 (48.66%), Postives = 148/261 (56.70%), Query Frame = 1


Query: 49  SRETILIGAETINNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSK 108
           SR+    G+E     LLP  S SS+Q G RW E EKA PLKKRRG+FE ++  +   HSK
Sbjct: 107 SRKGRSFGSEKTQAELLPPLSPSSTQDG-RWYEGEKAIPLKKRRGNFEENNKNNAATHSK 166

Query: 109 DSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVG--LDA----------------VVGK 168
                        K  MKTKMNKKC+   K+  +G  LD                 +V K
Sbjct: 167 KM-----------KAKMKTKMNKKCSTRNKEDSMGEELDEEDEEEKKVEETKAEVNIVSK 226

Query: 169 KRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATP 228
           KR+RG ALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSM +VR+RS+ +  P
Sbjct: 227 KRARGSALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSIASTAP 286

Query: 229 KNIVVVE-KDEKKPSPSPPPS-----------------PFPSSPPPPSSFSLTSKKRMKL 274
           K + V    D    S SPPPS                 PF      P    + +KKRMKL
Sbjct: 287 KEVHVHHLPDPSSSSSSPPPSFCSLDHEKQIECVDNAEPFGDEEKKPE--IIMTKKRMKL 346

[Close]

BLAST of Csa3G806230 vs. TrEMBL
Match: A0A0L9TUM7_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g023700 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 7.2e-48
Identity = 142/365 (38.90%), Postives = 178/365 (48.77%), Query Frame = 1


Query: 1   MRIRKRQLPLP---------------------------------TFSSLSDPPVQL-PLP 60
           MRIRKRQ+P P                                 TF S + P   L P  
Sbjct: 1   MRIRKRQVPFPLLPVTHSDPNLINRSPVMVQLNDAITTSLHPSCTFGSAAAPSFLLDPSQ 60

Query: 61  SSDPPINPLDN-----------NQKQKLLQQYDSRETILIGAETINNALLPH-------- 120
            SD P+ P+              + Q L QQ   +   L+  E        H        
Sbjct: 61  PSDQPLAPIGKPTNGSDEYSGEGETQNLRQQRKKQGDSLMEDERREEEGRGHKGNDTRKG 120

Query: 121 --------SSSSSSQGGGRWCEKEKAFPLKKRRGSFERSS-DEDNDDHSKDSDHQVATKL 180
                   SSSS  +  GRW E +KAFP KKRRG+FE ++ D  ND+   D D + ++K+
Sbjct: 121 RISWSETVSSSSPPKQDGRWSEGDKAFPPKKRRGTFENATEDNSNDEEENDDDDKKSSKM 180

Query: 181 QDEKKMMKTKMNKKCTLSQKQSKVG----------------------LDAVVGKKRSRGG 240
             + K MKTKMN+KC+     +K G                       +  VGKKR RGG
Sbjct: 181 --KMKRMKTKMNRKCSRRGDSNKEGGEEEEEDDDDDEYEEEVTRETKAEVHVGKKRVRGG 240

Query: 241 ALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL-------VAAT 274
           ALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSM +VRN+S+        ++ 
Sbjct: 241 ALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNKSIGTTSGAPKSSM 300

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BLAST of Csa3G806230 vs. TAIR10
Match: AT2G42040.1 (AT2G42040.1 WRC (InterPro:IPR014977))

HSP 1 Score: 121.3 bits (303), Expect = 9.7e-28
Identity = 99/263 (37.64%), Postives = 120/263 (45.63%), Query Frame = 1


Query: 7   QLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETINNALLP 66
           QL LP  S +SD  +Q  L      +  LD++     ++      T   G++ +N    P
Sbjct: 51  QLSLPPPSQISDRLIQRDLIKKKEEVKALDDDNGDVDVKS----RTDASGSKNVN----P 110

Query: 67  HSSSSSSQGGGRWCEK-EKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQDEKKMM 126
              S SS    +  EK EK   L+KRRG       ED +D              +E    
Sbjct: 111 RGESVSSI---QVVEKNEKVVSLRKRRGFINFEDYEDEED--------------EEASGG 170

Query: 127 KTKMNKKCTLSQKQSKVGLDAVVGKKRSR--GGALMEGSRCSRVNGRGWRCCQQTLVGYS 186
             ++NK                 GKK+++  GG L EGSRCSRVNGRGWRCCQQTLVGYS
Sbjct: 171 GGRINK-----------------GKKKAKKSGGGLEEGSRCSRVNGRGWRCCQQTLVGYS 230

Query: 187 LCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPPSSFS 246
           LCEHHLGKGR+RSMN            K  VVVE                          
Sbjct: 231 LCEHHLGKGRVRSMNKSGGG---RGGEKKAVVVE-------------------------- 241

Query: 247 LTSKKRMKLGVVKARSMSSLLGQ 267
              KKR+KLG+VKARS+SSLLGQ
Sbjct: 291 -VKKKRVKLGMVKARSISSLLGQ 241

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BLAST of Csa3G806230 vs. NCBI nr
Match: gi|778684741|ref|XP_011652086.1| (PREDICTED: uncharacterized protein LOC101223014 isoform X2 [Cucumis sativus])

HSP 1 Score: 585.5 bits (1508), Expect = 5.1e-164
Identity = 289/289 (100.00%), Postives = 289/289 (100.00%), Query Frame = 1


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60
           MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60

Query: 61  NNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQD 120
           NNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQD
Sbjct: 61  NNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQD 120

Query: 121 EKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLV 180
           EKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLV
Sbjct: 121 EKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLV 180

Query: 181 GYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPPS 240
           GYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPPS
Sbjct: 181 GYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPPS 240

Query: 241 SFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           SFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK
Sbjct: 241 SFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 289

[Close]

BLAST of Csa3G806230 vs. NCBI nr
Match: gi|449437904|ref|XP_004136730.1| (PREDICTED: uncharacterized protein LOC101223014 isoform X1 [Cucumis sativus])

HSP 1 Score: 580.9 bits (1496), Expect = 1.3e-162
Identity = 289/290 (99.66%), Postives = 289/290 (99.66%), Query Frame = 1


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60
           MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60

Query: 61  NNALLPHSSSSSSQ-GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ 120
           NNALLPHSSSSSSQ GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ
Sbjct: 61  NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQ 120

Query: 121 DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180
           DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL
Sbjct: 121 DEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180

Query: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP 240
           VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP
Sbjct: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPP 240

Query: 241 SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK
Sbjct: 241 SSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290

[Close]

BLAST of Csa3G806230 vs. NCBI nr
Match: gi|659084724|ref|XP_008443038.1| (PREDICTED: uncharacterized protein LOC103486754 isoform X2 [Cucumis melo])

HSP 1 Score: 510.8 bits (1314), Expect = 1.6e-141
Identity = 265/294 (90.14%), Postives = 272/294 (92.52%), Query Frame = 1


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSS----DPPINPLDNN-QKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVA 120
           GAETINNALLPHSSSSS  GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+KD   QVA
Sbjct: 61  GAETINNALLPHSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNKDI--QVA 120

Query: 121 TKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCC 180
           TKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRCC
Sbjct: 121 TKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCC 180

Query: 181 QQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSS 240
           QQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPS    PS FPSS
Sbjct: 181 QQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPS----PSQFPSS 240

Query: 241 PPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           PPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNIDK
Sbjct: 241 PPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNIDK 287

[Close]

BLAST of Csa3G806230 vs. NCBI nr
Match: gi|659084726|ref|XP_008443039.1| (PREDICTED: uncharacterized protein LOC103486754 isoform X3 [Cucumis melo])

HSP 1 Score: 508.8 bits (1309), Expect = 6.1e-141
Identity = 266/294 (90.48%), Postives = 273/294 (92.86%), Query Frame = 1


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSS----DPPINPLDNN-QKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVA 120
           GAETINNALLPHSSSSS QGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+KD   QVA
Sbjct: 61  GAETINNALLPHSSSSS-QGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNKDI--QVA 120

Query: 121 TKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCC 180
           TKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRCC
Sbjct: 121 TKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRCC 180

Query: 181 QQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSS 240
           QQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPS    PS FPSS
Sbjct: 181 QQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPS----PSQFPSS 240

Query: 241 PPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290
           PPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNIDK
Sbjct: 241 PPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNIDK 286

[Close]

BLAST of Csa3G806230 vs. NCBI nr
Match: gi|659084722|ref|XP_008443037.1| (PREDICTED: uncharacterized protein LOC103486754 isoform X1 [Cucumis melo])

HSP 1 Score: 503.8 bits (1296), Expect = 2.0e-139
Identity = 265/301 (88.04%), Postives = 272/301 (90.37%), Query Frame = 1


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSS----DPPINPLDNN-QKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPVQL LPSS    DPPINPLDNN QKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVQLHLPSSSSSSDPPINPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQ-------GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSK 120
           GAETINNALLPHSSSSS         GGGRWCEKEKAFPLKKRRGSFERSSDEDNDDH+K
Sbjct: 61  GAETINNALLPHSSSSSQVVVVFDVVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHNK 120

Query: 121 DSDHQVATKLQDEKKMMKTKMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVN 180
           D   QVATKLQDEKKM+KTKMNKKCTLSQKQSKVGLD VVGKKRSRGGALMEGSRCSRVN
Sbjct: 121 DI--QVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVN 180

Query: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPP 240
           GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+EKDEKKPS    
Sbjct: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIEKDEKKPS---- 240

Query: 241 PSPFPSSPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNID 290
           PS FPSSPPPPSSFSLT+KKRMKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNID
Sbjct: 241 PSQFPSSPPPPSSFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNID 294

The following BLAST results are available for this feature:

BLAST of Csa3G806230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGX5_CUCSA	3.6e-164	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G806230 PE=4 SV=1	[more]
A0A0R0EMN2_SOYBN	5.9e-50	48.66	Uncharacterized protein OS=Glycine max GN=GLYMA_19G148700 PE=4 SV=1	[more]
I1N995_SOYBN	5.9e-50	48.66	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A0B2SMD2_GLYSO	1.0e-49	48.66	Uncharacterized protein OS=Glycine soja GN=glysoja_028434 PE=4 SV=1	[more]
A0A0L9TUM7_PHAAN	7.2e-48	38.90	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g023700 PE=4 SV=1	[more]

BLAST of Csa3G806230 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42040.1	9.7e-28	37.64	WRC (InterPro:IPR014977)	[more]

BLAST of Csa3G806230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778684741\|ref\|XP_011652086.1\|	5.1e-164	100.00	PREDICTED: uncharacterized protein LOC101223014 isoform X2 [Cucumis sativus]	[more]
gi\|449437904\|ref\|XP_004136730.1\|	1.3e-162	99.66	PREDICTED: uncharacterized protein LOC101223014 isoform X1 [Cucumis sativus]	[more]
gi\|659084724\|ref\|XP_008443038.1\|	1.6e-141	90.14	PREDICTED: uncharacterized protein LOC103486754 isoform X2 [Cucumis melo]	[more]
gi\|659084726\|ref\|XP_008443039.1\|	6.1e-141	90.48	PREDICTED: uncharacterized protein LOC103486754 isoform X3 [Cucumis melo]	[more]
gi\|659084722\|ref\|XP_008443037.1\|	2.0e-139	88.04	PREDICTED: uncharacterized protein LOC103486754 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR014977	WRC_dom

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006351	transcription, DNA-templated
GO:0032502	developmental process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU124430	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G806230.1	Csa3G806230.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU124430	CU124430	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 160..200 score: 2.8
IPR014977	WRC domain	PROFILE	PS51667	WRC	coord: 158..202 score: 21
None	No IPR available	PANTHER	PTHR31602:SF19	SUBFAMILY NOT NAMED	coord: 148..227 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G806230	Cla017551	Watermelon (97103) v1	cuwmB198
Csa3G806230	MELO3C009616	Melon (DHL92) v3.5.1	cumeB223
Csa3G806230	ClCG10G017600	Watermelon (Charleston Gray)	cuwcgB194
Csa3G806230	Lsi03G017440	Bottle gourd (USVL1VR-Ls)	culsiB186
Csa3G806230	MELO3C009616.2	Melon (DHL92) v3.6.1	cumedB207
Csa3G806230	Cla97C10G200470	Watermelon (97103) v2	cuwmbB186
Csa3G806230	Bhi11G002111	Wax gourd	cuwgoB222
Csa3G806230	CSPI03G36370	Wild cucumber (PI 183967)	cpicuB120
Csa3G806230	Cucsa.242590	Cucumber (Gy14) v1	cgycuB344
Csa3G806230	CmaCh14G004120	Cucurbita maxima (Rimu)	cmacuB239
Csa3G806230	CmaCh06G001060	Cucurbita maxima (Rimu)	cmacuB826
Csa3G806230	CmoCh14G004160	Cucurbita moschata (Rifu)	cmocuB226
Csa3G806230	CmoCh06G001000	Cucurbita moschata (Rifu)	cmocuB816
Csa3G806230	Cp4.1LG03g04070	Cucurbita pepo (Zucchini)	cpecuB597
Csa3G806230	CsGy3G033830	Cucumber (Gy14) v2	cgybcuB110
Csa3G806230	Carg03576	Silver-seed gourd	carcuB0276
Csa3G806230	Carg01222	Silver-seed gourd	carcuB0172

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G806230	Cucumber (Chinese Long) v2	cucuB134