CsGy3G033830 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy3G033830
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	WRC protein
Location	Chr3 : 32728653 .. 32731041 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAAATAGAGAAAAAAAGAAAAGGAAAAGAGATGAGTGGGTCCCCATCAAATGGGAGCGTAGGCCTCGTCTTAATTAAATAAATATAAAAAGAAAAGGAAACGATAAAACTACCCACTTGCATCACCCTCTCCTCTCCCTCCGTACTCTCCACTCTGCTCCTCCGATTCCCCATTCCCCCTTTACCTGCTACCTTCTCTTCCGGTTTCCCCCCCCGGTGCAACTCACAATTAAAACCATACACACACACACACACACTCCCTCACAAAAATCCCATTCCCCAAATTCTCCCCCAAGATAAGACCATCCCCCTCTAGTTACTTCTTCCTTTCCGATCACTTCCCCCGATATGCGAATCAGAAAACGCCAGCTCCCATTACCCACCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCCTCTCCCCTCCTCCGATCCTCCCATTAATCCCTTGGTTAGTATATTCATTTCCATCTACCTCCGATTTCTCTCTTCTCTTTTTCTTTTTCTTCAATTGCACCCCACGATTTCTTTACACTACTAACACACCGCCCACCCTCTTCTCAATTTTTTTTACATCTATCACTCATCATTCATTCATGGGGGTTATTCTCCCATTTTTCTCTACTGTAGGACAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGTACCCATTAACTCAAATCTCCCCCCCCTCCCTATTTCTTTCTTCCTCCAACAATTAGTAAAAAAGTTTTCTTTTTTCTTTTTTCTTTTTTATTGGTATCCAATCAGAATAGAGGGGAAAAGAAAGGGGGCAAGTGGAAATACTGTTGGGATATTTTTTTTTATATACATATATTTCATTAGTCTATTGTGCGCTCATGGGCTCTGCATGTTCTTCTTCACTATAAATGGTCCACACCCTCCCCTTTCCTCTGATCACTTACCAGTAATTAATTGTACACTTTACATATTCTTTTTGTTTTCCTTACGATTAATTGTTTTTTTTTTTTTTTTTTTTTTTTTGCATTACATGAGTACCTCAGCTATGGGTTGTGATCACTTTTTTCTTTTCTCTTTGGTTTTTAGGGAAACTATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCTTCCTCTTCTTCCTCTCAAGGTTAATACCTTTCTTGTCCCTTTTAATTTAACTTACTCTTTCGCTATTTGGCTACCTACTGCACTGCACCCATTTTTCATTTTTCATTTATATTATATTCTCATTTATTCAAGTATACTTTTTCTGTTGTGAGATTTTGTATGTTTAATTCATATGGAGGGTCTTGTTTTGGGCTCTTTTCCTTTTTGAACTTTGTGATTGATGGTGGGAATTATATTCTTGTTTAATTTGTTTATATATATGTGTGTGTGTGTTCTTGTTTTAGTTGTGCTTATGTTTGATGTAGTAGGTGGTGGGAGATGGTGCGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGGAGCTTTGAGAGGTCAAGTGACGAGGATAATGACGATCACAGCAAAGATAGTGATCATCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATGAAGACGAAGATGAACAAGAAATGTACATTGTCACAGAAGCAACCTAAAGTGGGTCTAGACGCTGTTGTCGGGAAAAAGAGGTCAAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGTTGCTGCTACACCCAAGAACATCGTCGTTGTTGAGAAAGACGAGAAGAAGCCATCTCCATCTCCACCTCCATCTCCATTCCCATCATCACCACCACCTCCTTCATCATTCTCGTTGACTAGTAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCAATGAGTAGCTTGCTCGGCCAACCCGAAGCCATGGCCGTGGCAACACCGCTGTCTCCGCCATCCACGTTGCATGATGACAACATTGACAAGTAAACTACTACATCTGTTACATAGATAACAGCTTCCTGATCTTTCCCTAAATTTTCAGTTTCTGTTCTTTCGATGGTATTTGGAAAAGTTTCTATTTAGATTGTTTTTTTTGTAAAGAGTGTTAATAGGAAAAGTTGATATTATATATCATAATTGTATTGTTTTATGTATTTGGACAATTGAACATATATATTATATATATTAATGTGTATACTACGTTTGTTTATATAGCAAATACTATGTGTGTGGATGAAGAAAATCAATTAAATTAAGCAATATTAGAAAGAGCAAAACATCCCAT

mRNA sequence

AGAAAATAGAGAAAAAAAGAAAAGGAAAAGAGATGAGTGGGTCCCCATCAAATGGGAGCGTAGGCCTCGTCTTAATTAAATAAATATAAAAAGAAAAGGAAACGATAAAACTACCCACTTGCATCACCCTCTCCTCTCCCTCCGTACTCTCCACTCTGCTCCTCCGATTCCCCATTCCCCCTTTACCTGCTACCTTCTCTTCCGGTTTCCCCCCCCGGTGCAACTCACAATTAAAACCATACACACACACACACACACTCCCTCACAAAAATCCCATTCCCCAAATTCTCCCCCAAGATAAGACCATCCCCCTCTAGTTACTTCTTCCTTTCCGATCACTTCCCCCGATATGCGAATCAGAAAACGCCAGCTCCCATTACCCACCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCCTCTCCCCTCCTCCGATCCTCCCATTAATCCCTTGGACAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGGAAACTATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCTTCCTCTTCTTCCTCTCAAGTAGGTGGTGGGAGATGGTGCGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGGAGCTTTGAGAGGTCAAGTGACGAGGATAATGACGATCACAGCAAAGATAGTGATCATCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATGAAGACGAAGATGAACAAGAAATGTACATTGTCACAGAAGCAACCTAAAGTGGGTCTAGACGCTGTTGTCGGGAAAAAGAGGTCAAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGTTGCTGCTACACCCAAGAACATCGTCGTTGTTGAGAAAGACGAGAAGAAGCCATCTCCATCTCCACCTCCATCTCCATTCCCATCATCACCACCACCTCCTTCATCATTCTCGTTGACTAGTAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCAATGAGTAGCTTGCTCGGCCAACCCGAAGCCATGGCCGTGGCAACACCGCTGTCTCCGCCATCCACGTTGCATGATGACAACATTGACAAGTAAACTACTACATCTGTTACATAGATAACAGCTTCCTGATCTTTCCCTAAATTTTCAGTTTCTGTTCTTTCGATGGTATTTGGAAAAGTTTCTATTTAGATTGTTTTTTTTGTAAAGAGTGTTAATAGGAAAAGTTGATATTATATATCATAATTGTATTGTTTTATGTATTTGGACAATTGAACATATATATTATATATATTAATGTGTATACTACGTTTGTTTATATAGCAAATACTATGTGTGTGGATGAAGAAAATCAATTAAATTAAGCAATATTAGAAAGAGCAAAACATCCCAT

Coding sequence (CDS)

ATGCGAATCAGAAAACGCCAGCTCCCATTACCCACCTTCTCTTCTCTCTCAGATCCCCCGGTGCAACTCCCTCTCCCCTCCTCCGATCCTCCCATTAATCCCTTGGACAATAATCAGAAGCAGAAGCTGCTCCAACAATATGATTCCAGGGAAACTATTTTGATTGGTGCAGAAACAATTAATAATGCCCTTCTTCCACATTCTTCCTCTTCTTCCTCTCAAGTAGGTGGTGGGAGATGGTGCGAGAAGGAGAAGGCGTTTCCATTAAAGAAGAGAAGAGGGAGCTTTGAGAGGTCAAGTGACGAGGATAATGACGATCACAGCAAAGATAGTGATCATCAAGTTGCCACCAAGCTGCAGGATGAGAAGAAGATGATGAAGACGAAGATGAACAAGAAATGTACATTGTCACAGAAGCAACCTAAAGTGGGTCTAGACGCTGTTGTCGGGAAAAAGAGGTCAAGAGGTGGTGCGTTAATGGAGGGATCTCGGTGTAGTCGTGTCAATGGACGAGGATGGCGATGCTGCCAACAAACTCTTGTTGGTTATTCTCTCTGTGAACATCACTTGGGTAAAGGTCGTCTTCGTAGCATGAACAACGTTCGCAACCGCTCGTTGGTTGCTGCTACACCCAAGAACATCGTCGTTGTTGAGAAAGACGAGAAGAAGCCATCTCCATCTCCACCTCCATCTCCATTCCCATCATCACCACCACCTCCTTCATCATTCTCGTTGACTAGTAAGAAGAGAATGAAACTGGGTGTGGTGAAAGCAAGGTCAATGAGTAGCTTGCTCGGCCAACCCGAAGCCATGGCCGTGGCAACACCGCTGTCTCCGCCATCCACGTTGCATGATGACAACATTGACAAGTAA

Protein sequence

MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDDHSKDSDHQVATKLQDEKKMMKTKMNKKCTLSQKQPKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEKDEKKPSPSPPPSPFPSSPPPPSSFSLTSKKRMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK

Homology

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BLAST of CsGy3G033830 vs. NCBI nr
Match: XP_004136730.1 (PREDICTED: uncharacterized protein LOC101223014 isoform X1 [Cucumis sativus])

HSP 1 Score: 433.0 bits (1112), Expect = 8.3e-118
Identity = 282/290 (97.24%), Postives = 282/290 (97.24%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60
           MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60

Query: 61  NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXXXXXXXXXXXXX 120
           NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXXXXXXXXXXXXX
Sbjct: 61  NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXXXXXXXXXXXXX 120

Query: 121 XXXXMMKTKMNKKCTLSQKQPKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180
           XXXX       KKCTLSQKQ KVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL
Sbjct: 121 XXXXXXXXXXXKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180

Query: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXXXXXXX 240
           VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 291
           XXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK
Sbjct: 241 XXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 290

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BLAST of CsGy3G033830 vs. NCBI nr
Match: XP_011652086.1 (PREDICTED: uncharacterized protein LOC101223014 isoform X2 [Cucumis sativus] >KGN59291.1 hypothetical protein Csa_3G806230 [Cucumis sativus])

HSP 1 Score: 407.1 bits (1045), Expect = 4.9e-110
Identity = 272/290 (93.79%), Postives = 272/290 (93.79%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60
           MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60

Query: 61  NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXXXXXXXXXXXXX 120
           NNALLPH           RWCEKEKAFPLKKRRGSFERSSDEDN XXXXXXXXXXXXXXX
Sbjct: 61  NNALLPH-XXXXXXXXXXRWCEKEKAFPLKKRRGSFERSSDEDNXXXXXXXXXXXXXXXX 120

Query: 121 XXXXMMKTKMNKKCTLSQKQPKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180
           XXXX     MNKKCTLSQKQ KVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL
Sbjct: 121 XXXXXXXXXMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180

Query: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXXXXXXX 240
           VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 291
           XXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK
Sbjct: 241 XXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 289

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BLAST of CsGy3G033830 vs. NCBI nr
Match: XP_008443038.1 (PREDICTED: uncharacterized protein LOC103486754 isoform X2 [Cucumis melo])

HSP 1 Score: 372.1 bits (954), Expect = 1.7e-99
Identity = 231/295 (78.31%), Postives = 236/295 (80.00%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPV----QLPLPSSDPPINPLD-NNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPV                PLD NNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVXXXXXXXXXXXXXXXXPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXXXXXXXX 120
           GAETINNALLPH SSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDND          
Sbjct: 61  GAETINNALLPH-SSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDND--DHNKDIQV 120

Query: 121 XXXXXXXXXMMKTKMNKKCTLSQKQPKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRC 180
                    M+KTKMNKKCTLSQKQ KVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRC
Sbjct: 121 ATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRC 180

Query: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXX 240
           CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+E       XXXXXXXXXX
Sbjct: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIE----KDEXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 291
           XXXXXXX        MKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNIDK
Sbjct: 241 XXXXXXXFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNIDK 287

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BLAST of CsGy3G033830 vs. NCBI nr
Match: XP_008443039.1 (PREDICTED: uncharacterized protein LOC103486754 isoform X3 [Cucumis melo])

HSP 1 Score: 354.8 bits (909), Expect = 2.9e-94
Identity = 223/295 (75.59%), Postives = 228/295 (77.29%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPV----QLPLPSSDPPINPLD-NNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPV                PLD NNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVXXXXXXXXXXXXXXXXPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXXXXXXXX 120
           GAETINNALLPH  S       GRWCEKEKAFPLKKRRGSFERSSDEDND          
Sbjct: 61  GAETINNALLPH--SXXXXXXXGRWCEKEKAFPLKKRRGSFERSSDEDND--DHNKDIQV 120

Query: 121 XXXXXXXXXMMKTKMNKKCTLSQKQPKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRC 180
                    M+KTKMNKKCTLSQKQ KVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRC
Sbjct: 121 ATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRC 180

Query: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXX 240
           CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+E       XXXXXXXXXX
Sbjct: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIE----KDEXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 291
           XXXXXXX        MKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNIDK
Sbjct: 241 XXXXXXXFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNIDK 286

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BLAST of CsGy3G033830 vs. NCBI nr
Match: XP_008443037.1 (PREDICTED: uncharacterized protein LOC103486754 isoform X1 [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 1.4e-80
Identity = 205/301 (68.11%), Postives = 210/301 (69.77%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPV----QLPLPSSDPPINPLDN-NQKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPV                PLDN      LLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVXXXXXXXXXXXXXXXXPLDNXXXXXXLLQQYDSRETILI 60

Query: 61  G------AETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXX 120
           G                            RWCEKEKAFPLKKRRGSFERSSDEDND    
Sbjct: 61  GXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWCEKEKAFPLKKRRGSFERSSDEDND--DH 120

Query: 121 XXXXXXXXXXXXXXXMMKTKMNKKCTLSQKQPKVGLDAVVGKKRSRGGALMEGSRCSRVN 180
                          M+KTKMNKKCTLSQKQ KVGLD VVGKKRSRGGALMEGSRCSRVN
Sbjct: 121 NKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVN 180

Query: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXX 240
           GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+E       XXXX
Sbjct: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIE----KDEXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNID 291
           XXXXXXXXXXXXX        MKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNID
Sbjct: 241 XXXXXXXXXXXXXFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNID 294

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BLAST of CsGy3G033830 vs. TAIR10
Match: AT2G42040.1 (WRC (InterPro:IPR014977))

HSP 1 Score: 97.8 bits (242), Expect = 1.1e-20
Identity = 58/109 (53.21%), Postives = 62/109 (56.88%), Query Frame = 0


Query: 159 LMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVE 218
           L EGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGR+RSMN            K  VVVE
Sbjct: 163 LEEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRVRSMNKSGGG---RGGEKKAVVVE 222

Query: 219 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKLGVVKARSMSSLLGQ 268
                                           +KLG+VKARS+SSLLGQ
Sbjct: 223 ---------------------------VKKKRVKLGMVKARSISSLLGQ 241

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BLAST of CsGy3G033830 vs. TAIR10
Match: AT5G53660.1 (growth-regulating factor 7)

HSP 1 Score: 44.7 bits (104), Expect = 1.2e-04
Identity = 17/42 (40.48%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 160 MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNV 202
           +E  RC R +G+ WRC ++ +  +  CE HL +GR RS  +V
Sbjct: 108 LEPGRCRRTDGKKWRCAKEVVSNHKYCEKHLHRGRPRSRKHV 149

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BLAST of CsGy3G033830 vs. Swiss-Prot
Match: sp|Q6AWY1|GRF8_ORYSJ (Growth-regulating factor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF8 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.5e-04
Identity = 22/62 (35.48%), Postives = 33/62 (53.23%), Query Frame = 0


Query: 156 GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNR--SLVAATPKN 215
           G A +E  RC R +G+ WRC +  +     CE H+ +GR RS  +V  R  +L  A P  
Sbjct: 155 GCADVEPRRCRRTDGKKWRCSRDAVGDQKYCERHINRGRHRSRKHVEGRKATLTIAEPST 214

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BLAST of CsGy3G033830 vs. TrEMBL
Match: tr|A0A0A0LGX5|A0A0A0LGX5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G806230 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 3.2e-110
Identity = 272/290 (93.79%), Postives = 272/290 (93.79%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60
           MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI
Sbjct: 1   MRIRKRQLPLPTFSSLSDPPVQLPLPSSDPPINPLDNNQKQKLLQQYDSRETILIGAETI 60

Query: 61  NNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXXXXXXXXXXXXX 120
           NNALLPH           RWCEKEKAFPLKKRRGSFERSSDEDN XXXXXXXXXXXXXXX
Sbjct: 61  NNALLPH-XXXXXXXXXXRWCEKEKAFPLKKRRGSFERSSDEDNXXXXXXXXXXXXXXXX 120

Query: 121 XXXXMMKTKMNKKCTLSQKQPKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180
           XXXX     MNKKCTLSQKQ KVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL
Sbjct: 121 XXXXXXXXXMNKKCTLSQKQSKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRCCQQTL 180

Query: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXXXXXXX 240
           VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 VGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 291
           XXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK
Sbjct: 241 XXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 289

[Close]

BLAST of CsGy3G033830 vs. TrEMBL
Match: tr|A0A1S3B760|A0A1S3B760_CUCME (uncharacterized protein LOC103486754 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486754 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.1e-99
Identity = 231/295 (78.31%), Postives = 236/295 (80.00%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPV----QLPLPSSDPPINPLD-NNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPV                PLD NNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVXXXXXXXXXXXXXXXXPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXXXXXXXX 120
           GAETINNALLPH SSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDND          
Sbjct: 61  GAETINNALLPH-SSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDND--DHNKDIQV 120

Query: 121 XXXXXXXXXMMKTKMNKKCTLSQKQPKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRC 180
                    M+KTKMNKKCTLSQKQ KVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRC
Sbjct: 121 ATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRC 180

Query: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXX 240
           CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+E       XXXXXXXXXX
Sbjct: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIE----KDEXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 291
           XXXXXXX        MKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNIDK
Sbjct: 241 XXXXXXXFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNIDK 287

[Close]

BLAST of CsGy3G033830 vs. TrEMBL
Match: tr|A0A1S3B7U9|A0A1S3B7U9_CUCME (uncharacterized protein LOC103486754 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103486754 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 1.9e-94
Identity = 223/295 (75.59%), Postives = 228/295 (77.29%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPV----QLPLPSSDPPINPLD-NNQKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPV                PLD NNQKQKLLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVXXXXXXXXXXXXXXXXPLDNNNQKQKLLQQYDSRETILI 60

Query: 61  GAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXXXXXXXX 120
           GAETINNALLPH  S       GRWCEKEKAFPLKKRRGSFERSSDEDND          
Sbjct: 61  GAETINNALLPH--SXXXXXXXGRWCEKEKAFPLKKRRGSFERSSDEDND--DHNKDIQV 120

Query: 121 XXXXXXXXXMMKTKMNKKCTLSQKQPKVGLDAVVGKKRSRGGALMEGSRCSRVNGRGWRC 180
                    M+KTKMNKKCTLSQKQ KVGLD VVGKKRSRGGALMEGSRCSRVNGRGWRC
Sbjct: 121 ATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVNGRGWRC 180

Query: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXXXXXXXX 240
           CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+E       XXXXXXXXXX
Sbjct: 181 CQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIE----KDEXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNIDK 291
           XXXXXXX        MKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNIDK
Sbjct: 241 XXXXXXXFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNIDK 286

[Close]

BLAST of CsGy3G033830 vs. TrEMBL
Match: tr|A0A1S3B737|A0A1S3B737_CUCME (uncharacterized protein LOC103486754 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486754 PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 9.1e-81
Identity = 205/301 (68.11%), Postives = 210/301 (69.77%), Query Frame = 0


Query: 1   MRIRKRQLPLPTFSSLSDPPV----QLPLPSSDPPINPLDN-NQKQKLLQQYDSRETILI 60
           MRIRKRQLPLP FSSLSDPPV                PLDN      LLQQYDSRETILI
Sbjct: 1   MRIRKRQLPLPAFSSLSDPPVXXXXXXXXXXXXXXXXPLDNXXXXXXLLQQYDSRETILI 60

Query: 61  G------AETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXXXX 120
           G                            RWCEKEKAFPLKKRRGSFERSSDEDND    
Sbjct: 61  GXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWCEKEKAFPLKKRRGSFERSSDEDND--DH 120

Query: 121 XXXXXXXXXXXXXXXMMKTKMNKKCTLSQKQPKVGLDAVVGKKRSRGGALMEGSRCSRVN 180
                          M+KTKMNKKCTLSQKQ KVGLD VVGKKRSRGGALMEGSRCSRVN
Sbjct: 121 NKDIQVATKLQDEKKMIKTKMNKKCTLSQKQSKVGLDIVVGKKRSRGGALMEGSRCSRVN 180

Query: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLVAATPKNIVVVEXXXXXXXXXXX 240
           GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSL AATPKNIVV+E       XXXX
Sbjct: 181 GRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLAAATPKNIVVIE----KDEXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXMKLGVVKARSMSSLLGQPEAMAVATPLSPPSTLHDDNID 291
           XXXXXXXXXXXXX        MKLGVVKARS+SSLLGQP+ + VATPLS PSTLHDDNID
Sbjct: 241 XXXXXXXXXXXXXFSLTNKKRMKLGVVKARSISSLLGQPDGI-VATPLSLPSTLHDDNID 294

[Close]

BLAST of CsGy3G033830 vs. TrEMBL
Match: tr|A0A1Q3B7F2|A0A1Q3B7F2_CEPFO (WRC domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07485 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 9.2e-41
Identity = 116/246 (47.15%), Postives = 134/246 (54.47%), Query Frame = 0


Query: 48  DSRETILIGAETINNALLPHSSSSSSQVGGGRWCEKEKAFPLKKRRGSFERSSDEDNDXX 107
           D+R   ++GA  I+   LP SSSS    G GRWCE EKAFPLKKRRGSFER  + + D  
Sbjct: 98  DTRSKSILGA-NIDIGNLPQSSSSLQ--GVGRWCEGEKAFPLKKRRGSFERRGNGEED-- 157

Query: 108 XXXXXXXXXXXXXXXXXMMKTKMNKKCTLSQKQPKVG--------LDAVVGKKRSRGGAL 167
                             MKTKMNKKC       + G        +D+   KK+ RGGAL
Sbjct: 158 ------------KKTRSKMKTKMNKKCVQQIGNEQEGKETKQSSIVDSTSAKKKGRGGAL 217

Query: 168 MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNNVRNRSLV-AATPK------ 227
           MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSM +VR+RSL  AAT K      
Sbjct: 218 MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRSRSLANAATKKDKSDDN 277

Query: 228 ---NIVVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKLGVVKARSMSSLLGQPE 276
              N   ++                                MKLG+VKARS+SSLLGQ +
Sbjct: 278 PLSNSSSLQEKQPLGGAFLDDNVENYNQEEDEKPLMSSKKRMKLGMVKARSISSLLGQTD 326

The following BLAST results are available for this feature:

BLAST of CsGy3G033830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136730.1	8.3e-118	97.24	PREDICTED: uncharacterized protein LOC101223014 isoform X1 [Cucumis sativus]	[more]
XP_011652086.1	4.9e-110	93.79	PREDICTED: uncharacterized protein LOC101223014 isoform X2 [Cucumis sativus] >KG...	[more]
XP_008443038.1	1.7e-99	78.31	PREDICTED: uncharacterized protein LOC103486754 isoform X2 [Cucumis melo]	[more]
XP_008443039.1	2.9e-94	75.59	PREDICTED: uncharacterized protein LOC103486754 isoform X3 [Cucumis melo]	[more]
XP_008443037.1	1.4e-80	68.11	PREDICTED: uncharacterized protein LOC103486754 isoform X1 [Cucumis melo]	[more]

BLAST of CsGy3G033830 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G42040.1	1.1e-20	53.21	WRC (InterPro:IPR014977)	[more]
AT5G53660.1	1.2e-04	40.48	growth-regulating factor 7	[more]

BLAST of CsGy3G033830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6AWY1\|GRF8_ORYSJ	5.5e-04	35.48	Growth-regulating factor 8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRF8 PE=2...	[more]

BLAST of CsGy3G033830 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LGX5\|A0A0A0LGX5_CUCSA	3.2e-110	93.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G806230 PE=4 SV=1	[more]
tr\|A0A1S3B760\|A0A1S3B760_CUCME	1.1e-99	78.31	uncharacterized protein LOC103486754 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3B7U9\|A0A1S3B7U9_CUCME	1.9e-94	75.59	uncharacterized protein LOC103486754 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1S3B737\|A0A1S3B737_CUCME	9.1e-81	68.11	uncharacterized protein LOC103486754 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A1Q3B7F2\|A0A1Q3B7F2_CEPFO	9.2e-41	47.15	WRC domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_0748...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0032502	developmental process
GO:0006351	transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR031137	GRF
IPR014977	WRC_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy3G033830.1	CsGy3G033830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014977	WRC domain	PFAM	PF08879	WRC	coord: 161..201 e-value: 1.2E-14 score: 53.6
IPR014977	WRC domain	PROSITE	PS51667	WRC	coord: 159..203 score: 21.189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..290
None	No IPR available	PANTHER	PTHR31602:SF19	SUBFAMILY NOT NAMED	coord: 100..274
IPR031137	Growth-regulating factor	PANTHER	PTHR31602	FAMILY NOT NAMED	coord: 100..274

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy3G033830	Cla017551	Watermelon (97103) v1	cgybwmB187
CsGy3G033830	Csa3G806230	Cucumber (Chinese Long) v2	cgybcuB110
CsGy3G033830	MELO3C009616	Melon (DHL92) v3.5.1	cgybmeB184
CsGy3G033830	ClCG10G017600	Watermelon (Charleston Gray)	cgybwcgB179
CsGy3G033830	CSPI03G36370	Wild cucumber (PI 183967)	cgybcpiB111
CsGy3G033830	CmaCh14G004120	Cucurbita maxima (Rimu)	cgybcmaB306
CsGy3G033830	CmaCh06G001060	Cucurbita maxima (Rimu)	cgybcmaB439
CsGy3G033830	CmoCh14G004160	Cucurbita moschata (Rifu)	cgybcmoB279
CsGy3G033830	CmoCh06G001000	Cucurbita moschata (Rifu)	cgybcmoB410
CsGy3G033830	Lsi03G017440	Bottle gourd (USVL1VR-Ls)	cgyblsiB171
CsGy3G033830	Cp4.1LG03g04070	Cucurbita pepo (Zucchini)	cgybcpeB395
CsGy3G033830	MELO3C009616.2	Melon (DHL92) v3.6.1	cgybmedB185
CsGy3G033830	CsaV3_3G038720	Cucumber (Chinese Long) v3	cgybcucB117
CsGy3G033830	Cla97C10G200470	Watermelon (97103) v2	cgybwmbB178
CsGy3G033830	Bhi11G002111	Wax gourd	cgybwgoB213
CsGy3G033830	Carg01222	Silver-seed gourd	carcgybB0167
CsGy3G033830	Carg03576	Silver-seed gourd	carcgybB0263

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None