Csa3G799650 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G799650
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTransmembrane and coiled-coil domain-containing protein; contains IPR002809 (Protein of unknown function DUF106, transmembrane)
LocationChr3 : 30780053 .. 30781152 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGAAAACACATCACTTAGATCCAAATCCAACTCCACAAAAATTCTCCCACTTTCCCTCGGATTAACCCATTTTCTCTTCCGATTCCGGCGATGGCCACAATCCCCCTCTTCTCCTCCTTCCGATACTCCGACAGTCTCTCCGTCGTCGGAATCTCCGTCTGCACCGCGGTCATCTGCGAAGCCATCTCATGGGTTCTAATCTACCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCCAAAATCACTGTCAAGAAATCCAAAACCAAGAAGATCGATCGCATCGAGACCAGTCTCAAGGAATCCAGCCGTGATCTCTCGCTCTTCAAGTTTAAATCCGGCGCCGTTGTTGCCCTTGTTCTGTTCGTCGTCTTTGGATTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAGGGTGACGATCCTACCGATTGTGCTATGGCGTTCTTGTACTTCCTCTGTTCTATCAGCATTAGGACCAATCTGCAGAAGTTCTTGGGATTCTCTCCGCCAAGAGGCGCCGGAGCTGGGTTGTTCCCGATGCCAGATCCTAAGACGAACTGATTTAGGTCAGGCTTGGATCAAATTAATACTCCCTTTCCCCCCCACCTTCATTATGAATGAATTTTTCGTACTGATGAAAACTTGGTTTGGGCTGATTAGGCTTACTTTTATTAGGGTTCTATATGTTCATTTTATAGTGAGTTCATCGGACTTAGTATAGCTATGGGTTCCACAAAATTGAGAGGGTCATTCTGGTTCTAATCTCTACTTGCATTCTTGATTAGATTTGGAAATAATACTATCTTTTTTGGGATCAATATAAGCTTTTGATCTTTGAAAACTTTGATTATGTTCAATGATTCTATTGCATTGGTTATGGTTGTGAAATTGAACTGTGAGTTCTGCTGGCTGTTGATCAAAATGTTTTGAGCTAGTCCAAGTGAAGCCTTCACTTCACTGCTTGTTTGGTATGTTATGGCAATTATTTTTCTG

mRNA sequence

ATGGCCACAATCCCCCTCTTCTCCTCCTTCCGATACTCCGACAGTCTCTCCGTCGTCGGAATCTCCGTCTGCACCGCGGTCATCTGCGAAGCCATCTCATGGGTTCTAATCTACCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCCAAAATCACTGTCAAGAAATCCAAAACCAAGAAGATCGATCGCATCGAGACCAGTCTCAAGGAATCCAGCCGTGATCTCTCGCTCTTCAAGTTTAAATCCGGCGCCGTTGTTGCCCTTGTTCTGTTCGTCGTCTTTGGATTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAGGGTGACGATCCTACCGATTGTGCTATGGCGTTCTTGTACTTCCTCTGTTCTATCAGCATTAGGACCAATCTGCAGAAGTTCTTGGGATTCTCTCCGCCAAGAGGCGCCGGAGCTGGGTTGTTCCCGATGCCAGATCCTAAGACGAACTGA

Coding sequence (CDS)

ATGGCCACAATCCCCCTCTTCTCCTCCTTCCGATACTCCGACAGTCTCTCCGTCGTCGGAATCTCCGTCTGCACCGCGGTCATCTGCGAAGCCATCTCATGGGTTCTAATCTACCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCCAAAATCACTGTCAAGAAATCCAAAACCAAGAAGATCGATCGCATCGAGACCAGTCTCAAGGAATCCAGCCGTGATCTCTCGCTCTTCAAGTTTAAATCCGGCGCCGTTGTTGCCCTTGTTCTGTTCGTCGTCTTTGGATTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAGGGTGACGATCCTACCGATTGTGCTATGGCGTTCTTGTACTTCCTCTGTTCTATCAGCATTAGGACCAATCTGCAGAAGTTCTTGGGATTCTCTCCGCCAAGAGGCGCCGGAGCTGGGTTGTTCCCGATGCCAGATCCTAAGACGAACTGA

Protein sequence

MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN*
Homology
[Close]
BLAST of Csa3G799650 vs. Swiss-Prot
Match: TMCO1_BOVIN (Transmembrane and coiled-coil domain-containing protein 1 OS=Bos taurus GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.2e-41
Identity = 85/182 (46.70%), Postives = 119/182 (65.38%), Query Frame = 1 

Query: 9   SFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L +V ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE  K   ++  
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
            ++ K KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  GRQQK-KKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 188
           P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

[Close]
BLAST of Csa3G799650 vs. Swiss-Prot
Match: TMCO1_HUMAN (Transmembrane and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=TMCO1 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.2e-41
Identity = 85/182 (46.70%), Postives = 119/182 (65.38%), Query Frame = 1 

Query: 9   SFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L +V ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE  K   ++  
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
            ++ K KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  GRQQK-KKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 188
           P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

[Close]
BLAST of Csa3G799650 vs. Swiss-Prot
Match: TMCO1_MOUSE (Transmembrane and coiled-coil domain-containing protein 1 OS=Mus musculus GN=Tmco1 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.2e-41
Identity = 85/182 (46.70%), Postives = 119/182 (65.38%), Query Frame = 1 

Query: 9   SFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L +V ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE  K   ++  
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
            ++ K KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  GRQQK-KKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 188
           P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

[Close]
BLAST of Csa3G799650 vs. Swiss-Prot
Match: TMCO1_PIG (Transmembrane and coiled-coil domains protein 1 OS=Sus scrofa GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.2e-41
Identity = 85/182 (46.70%), Postives = 119/182 (65.38%), Query Frame = 1 

Query: 9   SFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L +V ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE  K   ++  
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
            ++ K KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  GRQQK-KKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 188
           P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

[Close]
BLAST of Csa3G799650 vs. Swiss-Prot
Match: TMCO1_PONAB (Transmembrane and coiled-coil domain-containing protein 1 OS=Pongo abelii GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.2e-41
Identity = 85/182 (46.70%), Postives = 119/182 (65.38%), Query Frame = 1 

Query: 9   SFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L +V ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE  K   ++  
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLEKKKETITESA 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
            ++ K KKI+R E  LK ++RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  GRQQK-KKIERQEEKLKNNNRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 188
           P   +  +SHR L GDD TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

[Close]
BLAST of Csa3G799650 vs. TrEMBL
Match: A0A0A0LGX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G799650 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 3.7e-101
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1 

Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

[Close]
BLAST of Csa3G799650 vs. TrEMBL
Match: W9RII6_9ROSA (Transmembrane and coiled-coil domains protein 1 OS=Morus notabilis GN=L484_018041 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 4.6e-91
Identity = 170/191 (89.01%), Postives = 182/191 (95.29%), Query Frame = 1 

Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MA   + +S +YSDSL VVGIS+CTAV+CEAISW+LIYRTNSYK+LRSSIDKAAKKLETM
Sbjct: 1   MALPSMLASLKYSDSLRVVGISICTAVVCEAISWLLIYRTNSYKSLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDS+KI  KKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSAKIAAKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDC+MAFLYFLCSISIRTNLQKFLGFSPPRGA A
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGASA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKT+
Sbjct: 181 GLFPMPDPKTS 191

[Close]
BLAST of Csa3G799650 vs. TrEMBL
Match: B7FGM9_MEDTR (Transmembrane and coiled-coil protein OS=Medicago truncatula GN=MTR_7g085050 PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 6.0e-91
Identity = 167/185 (90.27%), Postives = 179/185 (96.76%), Query Frame = 1 

Query: 7   FSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSK 66
           FS F+YSD L+VVGIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETMKTDS+K
Sbjct: 5   FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 67  ITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLP 126
           I +KKSKTKKIDR+ETSLKESSRDLSLFKFKSG VVALVLFVVFGLLNSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 127 FKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 186
           FKPFGLVMKMSHRGLQG+DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGAGAGLFPMP
Sbjct: 125 FKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGLFPMP 184

Query: 187 DPKTN 192
           DPKT+
Sbjct: 185 DPKTS 189

[Close]
BLAST of Csa3G799650 vs. TrEMBL
Match: W9SNZ3_9ROSA (Transmembrane and coiled-coil domains protein 1 OS=Morus notabilis GN=L484_000651 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.3e-90
Identity = 169/191 (88.48%), Postives = 182/191 (95.29%), Query Frame = 1 

Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MA   + +S +YSDSL VVGIS+CTAV+CEAISW+LIYRTNSYK+LRSSIDKAAKKLETM
Sbjct: 1   MALPSMLASLKYSDSLRVVGISICTAVVCEAISWLLIYRTNSYKSLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KT+S+KI  KKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTESAKIAAKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDC+MAFLYFLCSISIRTNLQKFLGFSPPRGA A
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGASA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKT+
Sbjct: 181 GLFPMPDPKTS 191

[Close]
BLAST of Csa3G799650 vs. TrEMBL
Match: C6TN19_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G108300 PE=2 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 1.7e-90
Identity = 166/185 (89.73%), Postives = 178/185 (96.22%), Query Frame = 1 

Query: 7   FSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSK 66
           FS F+YSD LSVVGIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETMKTDS+K
Sbjct: 5   FSDFKYSDGLSVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 67  ITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLP 126
           I +KKSKTKKIDR+ETSLKESSRDLSLFKFKSG VVALVLFVVFGLLNSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 127 FKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 186
           FKPFGL+MKMSHRGLQG+DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGA AGLFPMP
Sbjct: 125 FKPFGLIMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGASAGLFPMP 184

Query: 187 DPKTN 192
           DPKT+
Sbjct: 185 DPKTS 189

[Close]
BLAST of Csa3G799650 vs. TAIR10
Match: AT3G12030.1 (AT3G12030.1 Protein of unknown function DUF106, transmembrane)

HSP 1 Score: 320.9 bits (821), Expect = 5.5e-88
Identity = 161/193 (83.42%), Postives = 177/193 (91.71%), Query Frame = 1 

Query: 3   TIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKT 62
           TIPLF+SF+Y+DSL+VVGIS CTA++CEAISW+LIYRT+SYK+L+ SIDKA KKLETMKT
Sbjct: 4   TIPLFASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKYSIDKATKKLETMKT 63

Query: 63  D--SSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 122
           +  SSK+++KKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 64  ENPSSKLSIKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 123

Query: 123 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA-- 182
           VVAKLPF P  +V KMSHRGL+GDDPTDC+MAFLY LCSISIRTNLQKFLGFSPPRGA  
Sbjct: 124 VVAKLPFHPITIVKKMSHRGLKGDDPTDCSMAFLYLLCSISIRTNLQKFLGFSPPRGAAG 183

Query: 183 GAGLFPMPDPKTN 192
             GLFPMPDPKTN
Sbjct: 184 AGGLFPMPDPKTN 196

[Close]
BLAST of Csa3G799650 vs. TAIR10
Match: AT5G06660.1 (AT5G06660.1 Protein of unknown function DUF106, transmembrane)

HSP 1 Score: 318.5 bits (815), Expect = 2.7e-87
Identity = 164/196 (83.67%), Postives = 179/196 (91.33%), Query Frame = 1 

Query: 1   MAT-IPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLET 60
           MAT IPLF+SF+Y+DSL+VVGIS CTA++CEAISW+LIYRT+SYK+L+SSIDKA+KKLET
Sbjct: 1   MATAIPLFASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLET 60

Query: 61  MKTD--SSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF 120
           MKTD  SSK+T KKSKTKKIDR+E+SLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF
Sbjct: 61  MKTDNPSSKLTNKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF 120

Query: 121 EGKVVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRG 180
           EGKVVAKLPF P  +V KMSHRGL+GDD TDC+MAFLY LCSISIRTNLQKFLGFSPPRG
Sbjct: 121 EGKVVAKLPFHPITIVRKMSHRGLKGDDSTDCSMAFLYLLCSISIRTNLQKFLGFSPPRG 180

Query: 181 A--GAGLFPMPDPKTN 192
           A    GLFPMPDPKTN
Sbjct: 181 AAGAGGLFPMPDPKTN 196

[Close]
BLAST of Csa3G799650 vs. NCBI nr
Match: gi|449437555|ref|XP_004136557.1| (PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis sativus])

HSP 1 Score: 375.6 bits (963), Expect = 5.3e-101
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1 

Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

[Close]
BLAST of Csa3G799650 vs. NCBI nr
Match: gi|659084702|ref|XP_008443026.1| (PREDICTED: transmembrane and coiled-coil domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 371.7 bits (953), Expect = 7.7e-100
Identity = 188/191 (98.43%), Postives = 191/191 (100.00%), Query Frame = 1 

Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+V+GISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

[Close]
BLAST of Csa3G799650 vs. NCBI nr
Match: gi|703122421|ref|XP_010102569.1| (Transmembrane and coiled-coil domains protein 1 [Morus notabilis])

HSP 1 Score: 342.0 bits (876), Expect = 6.5e-91
Identity = 170/191 (89.01%), Postives = 182/191 (95.29%), Query Frame = 1 

Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MA   + +S +YSDSL VVGIS+CTAV+CEAISW+LIYRTNSYK+LRSSIDKAAKKLETM
Sbjct: 1   MALPSMLASLKYSDSLRVVGISICTAVVCEAISWLLIYRTNSYKSLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDS+KI  KKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSAKIAAKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDC+MAFLYFLCSISIRTNLQKFLGFSPPRGA A
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGASA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKT+
Sbjct: 181 GLFPMPDPKTS 191

[Close]
BLAST of Csa3G799650 vs. NCBI nr
Match: gi|357508575|ref|XP_003624576.1| (transmembrane and coiled-coil protein [Medicago truncatula])

HSP 1 Score: 341.7 bits (875), Expect = 8.6e-91
Identity = 167/185 (90.27%), Postives = 179/185 (96.76%), Query Frame = 1 

Query: 7   FSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSK 66
           FS F+YSD L+VVGIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETMKTDS+K
Sbjct: 5   FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 67  ITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLP 126
           I +KKSKTKKIDR+ETSLKESSRDLSLFKFKSG VVALVLFVVFGLLNSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 127 FKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 186
           FKPFGLVMKMSHRGLQG+DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGAGAGLFPMP
Sbjct: 125 FKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGLFPMP 184

Query: 187 DPKTN 192
           DPKT+
Sbjct: 185 DPKTS 189

[Close]
BLAST of Csa3G799650 vs. NCBI nr
Match: gi|703087033|ref|XP_010093166.1| (Transmembrane and coiled-coil domains protein 1 [Morus notabilis])

HSP 1 Score: 340.5 bits (872), Expect = 1.9e-90
Identity = 169/191 (88.48%), Postives = 182/191 (95.29%), Query Frame = 1 

Query: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MA   + +S +YSDSL VVGIS+CTAV+CEAISW+LIYRTNSYK+LRSSIDKAAKKLETM
Sbjct: 1   MALPSMLASLKYSDSLRVVGISICTAVVCEAISWLLIYRTNSYKSLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KT+S+KI  KKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTESAKIAAKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDC+MAFLYFLCSISIRTNLQKFLGFSPPRGA A
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFSPPRGASA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKT+
Sbjct: 181 GLFPMPDPKTS 191

The following BLAST results are available for this feature:
BLAST of Csa3G799650 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TMCO1_BOVIN6.2e-4146.70Transmembrane and coiled-coil domain-containing protein 1 OS=Bos taurus GN=TMCO1... [more]
TMCO1_HUMAN6.2e-4146.70Transmembrane and coiled-coil domain-containing protein 1 OS=Homo sapiens GN=TMC... [more]
TMCO1_MOUSE6.2e-4146.70Transmembrane and coiled-coil domain-containing protein 1 OS=Mus musculus GN=Tmc... [more]
TMCO1_PIG6.2e-4146.70Transmembrane and coiled-coil domains protein 1 OS=Sus scrofa GN=TMCO1 PE=2 SV=1[more]
TMCO1_PONAB6.2e-4146.70Transmembrane and coiled-coil domain-containing protein 1 OS=Pongo abelii GN=TMC... [more]
BLAST of Csa3G799650 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGX0_CUCSA3.7e-101100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G799650 PE=4 SV=1[more]
W9RII6_9ROSA4.6e-9189.01Transmembrane and coiled-coil domains protein 1 OS=Morus notabilis GN=L484_01804... [more]
B7FGM9_MEDTR6.0e-9190.27Transmembrane and coiled-coil protein OS=Medicago truncatula GN=MTR_7g085050 PE=... [more]
W9SNZ3_9ROSA1.3e-9088.48Transmembrane and coiled-coil domains protein 1 OS=Morus notabilis GN=L484_00065... [more]
C6TN19_SOYBN1.7e-9089.73Uncharacterized protein OS=Glycine max GN=GLYMA_19G108300 PE=2 SV=1[more]
BLAST of Csa3G799650 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12030.15.5e-8883.42 Protein of unknown function DUF106, transmembrane[more]
AT5G06660.12.7e-8783.67 Protein of unknown function DUF106, transmembrane[more]
BLAST of Csa3G799650 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449437555|ref|XP_004136557.1|5.3e-101100.00PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis sa... [more]
gi|659084702|ref|XP_008443026.1|7.7e-10098.43PREDICTED: transmembrane and coiled-coil domain-containing protein 1-like [Cucum... [more]
gi|703122421|ref|XP_010102569.1|6.5e-9189.01Transmembrane and coiled-coil domains protein 1 [Morus notabilis][more]
gi|357508575|ref|XP_003624576.1|8.6e-9190.27transmembrane and coiled-coil protein [Medicago truncatula][more]
gi|703087033|ref|XP_010093166.1|1.9e-9088.48Transmembrane and coiled-coil domains protein 1 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002809EMC3/TMCO1
IPR008559TMCO1
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0070588 calcium ion transmembrane transport
biological_process GO:0032469 endoplasmic reticulum calcium ion homeostasis
biological_process GO:0006816 calcium ion transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0030176 integral component of endoplasmic reticulum membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005262 calcium channel activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU089016cucumber EST collection version 3.0transcribed_cluster
CU089026cucumber EST collection version 3.0transcribed_cluster
CU096831cucumber EST collection version 3.0transcribed_cluster
CU160658cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G799650.1Csa3G799650.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU096831CU096831transcribed_cluster
CU089016CU089016transcribed_cluster
CU160658CU160658transcribed_cluster
CU089026CU089026transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002809Protein of unknown function DUF106, transmembranePFAMPF01956DUF106coord: 17..173
score: 1.5
IPR002809Protein of unknown function DUF106, transmembraneSMARTSM01415DUF106_2coord: 14..174
score: 1.2
IPR008559Uncharacterised conserved protein UCP023322, transmembrane eukaryoticPIRPIRSF023322UCP023322_TM_coiled-coilcoord: 5..191
score: 2.4
IPR008559Uncharacterised conserved protein UCP023322, transmembrane eukaryoticPANTHERPTHR20917PNAS-RELATEDcoord: 1..191
score: 8.8E
NoneNo IPR availableunknownCoilCoilcoord: 43..63
scor