MELO3C009607.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C009607.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionTransmembrane and coiled-coil domains protein 1
Locationchr04 : 30825007 .. 30826125 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAATTGGGAACTGGGAACGACATCTTTCCCAATTTCAACAATTGAGGAACTAACCAATTTTGATGGTAATTGATGAAAGTTGAGATATAATATATATTTTTTCATCACATCACTTAGATCCAAATCCAATTCCACAAAAATTCTCCCACTTTCCCCTCCGGGATTAACCCATTTTCTCTTCCGATTCCGGCGATGGCCACGATCCCCCTCTTCTCCTCCTTCCGATACTCCGACAGTCTCACTGTCCTCGGAATCTCCGTCTGCACCGCCGTCATTTGCGAAGCCATCTCATGGGTTCTAATCTATCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCTAAAATCACTGTAAAGAAATCCAAAACCAAGAAGATCGATCGCATCGAGACCAGTCTCAAGGAATCCAGCCGTGATCTCTCGCTCTTCAAGTTTAAATCCGGCGCCGTTGTTGCCCTTGTTCTGTTCGTCGTCTTTGGATTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAGGGTGAGGATCCTACCGATTGCGCTATGGCGTTCTTGTACTTCCTCTGTTCTATTAGCATTAGGACCAATCTGCAGAAGTTCTTGGGATTCTCTCCGCCGAGAGGCGCCGGAGCTGGGTTGTTCCCGATGCCAGATCCTAAGACGAACTGATTTAGTTCAGGCTTGGATCAAATTAATACTCTCTTTTCCCCCCTCCTTCATTATGAATGAATTTTCGTACTGATGAAAACTTGGTTTGGGCTGATTAGGCTTACTTTTATTAGGGTTCTATATGTTCATTTTATAGTGAGTTCATCGGACTTAGTATAGCTATGGGTTCCACAAATTTGAGAGGGTCATTCTGGTTCAAATCTCTACTTGCATTCTTGATTAGATTTGGAAATAATACTATCTTTTTTGGGATCAATATAAGCTTTTGATCTTTGAAAACTTTGATTATGTTCAACGATTCTATTGCATTGGTTATGATTGTGAAATTGAACTGTGAGTTCTGCTGGCTA

mRNA sequence

AGAATTGGGAACTGGGAACGACATCTTTCCCAATTTCAACAATTGAGGAACTAACCAATTTTGATGGTAATTGATGAAAGTTGAGATATAATATATATTTTTTCATCACATCACTTAGATCCAAATCCAATTCCACAAAAATTCTCCCACTTTCCCCTCCGGGATTAACCCATTTTCTCTTCCGATTCCGGCGATGGCCACGATCCCCCTCTTCTCCTCCTTCCGATACTCCGACAGTCTCACTGTCCTCGGAATCTCCGTCTGCACCGCCGTCATTTGCGAAGCCATCTCATGGGTTCTAATCTATCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCTAAAATCACTGTAAAGAAATCCAAAACCAAGAAGATCGATCGCATCGAGACCAGTCTCAAGGAATCCAGCCGTGATCTCTCGCTCTTCAAGTTTAAATCCGGCGCCGTTGTTGCCCTTGTTCTGTTCGTCGTCTTTGGATTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAGGGTGAGGATCCTACCGATTGCGCTATGGCGTTCTTGTACTTCCTCTGTTCTATTAGCATTAGGACCAATCTGCAGAAGTTCTTGGGATTCTCTCCGCCGAGAGGCGCCGGAGCTGGGTTGTTCCCGATGCCAGATCCTAAGACGAACTGATTTAGTTCAGGCTTGGATCAAATTAATACTCTCTTTTCCCCCCTCCTTCATTATGAATGAATTTTCGTACTGATGAAAACTTGGTTTGGGCTGATTAGGCTTACTTTTATTAGGGTTCTATATGTTCATTTTATAGTGAGTTCATCGGACTTAGTATAGCTATGGGTTCCACAAATTTGAGAGGGTCATTCTGGTTCAAATCTCTACTTGCATTCTTGATTAGATTTGGAAATAATACTATCTTTTTTGGGATCAATATAAGCTTTTGATCTTTGAAAACTTTGATTATGTTCAACGATTCTATTGCATTGGTTATGATTGTGAAATTGAACTGTGAGTTCTGCTGGCTA

Coding sequence (CDS)

ATGGCCACGATCCCCCTCTTCTCCTCCTTCCGATACTCCGACAGTCTCACTGTCCTCGGAATCTCCGTCTGCACCGCCGTCATTTGCGAAGCCATCTCATGGGTTCTAATCTATCGCACCAACTCCTACAAAACCCTTCGATCCTCCATCGACAAGGCCGCCAAAAAGCTCGAGACCATGAAGACTGACAGCTCTAAAATCACTGTAAAGAAATCCAAAACCAAGAAGATCGATCGCATCGAGACCAGTCTCAAGGAATCCAGCCGTGATCTCTCGCTCTTCAAGTTTAAATCCGGCGCCGTTGTTGCCCTTGTTCTGTTCGTCGTCTTTGGATTGCTCAATTCGCTCTTCGAAGGCAAGGTTGTTGCCAAATTGCCGTTTAAGCCTTTTGGGCTTGTGATGAAGATGAGTCACCGAGGGTTACAGGGTGAGGATCCTACCGATTGCGCTATGGCGTTCTTGTACTTCCTCTGTTCTATTAGCATTAGGACCAATCTGCAGAAGTTCTTGGGATTCTCTCCGCCGAGAGGCGCCGGAGCTGGGTTGTTCCCGATGCCAGATCCTAAGACGAACTGA

Protein sequence

MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPKTN
Homology
[Close]
BLAST of MELO3C009607.2 vs. NCBI nr
Match: XP_008443026.1 (PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis melo])

HSP 1 Score: 365.9 bits (938), Expect = 8.2e-98
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 

Query: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

[Close]
BLAST of MELO3C009607.2 vs. NCBI nr
Match: XP_004136557.1 (PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis sativus] >KGN59281.1 hypothetical protein Csa_3G799650 [Cucumis sativus])

HSP 1 Score: 362.1 bits (928), Expect = 1.2e-96
Identity = 188/191 (98.43%), Postives = 191/191 (100.00%), Query Frame = 0 

Query: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+V+GISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

[Close]
BLAST of MELO3C009607.2 vs. NCBI nr
Match: XP_003624576.1 (calcium load-activated calcium channel [Medicago truncatula] >ACJ83908.1 unknown [Medicago truncatula] >AES80794.1 transmembrane and coiled-coil protein [Medicago truncatula] >AFK35592.1 unknown [Medicago truncatula])

HSP 1 Score: 332.4 bits (851), Expect = 1.0e-87
Identity = 167/185 (90.27%), Postives = 178/185 (96.22%), Query Frame = 0 

Query: 7   FSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSK 66
           FS F+YSD LTV+GIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETMKTDS+K
Sbjct: 5   FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 67  ITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLP 126
           I +KKSKTKKIDR+ETSLKESSRDLSLFKFKSG VVALVLFVVFGLLNSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 127 FKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 186
           FKPFGLVMKMSHRGLQG DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGAGAGLFPMP
Sbjct: 125 FKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGLFPMP 184

Query: 187 DPKTN 192
           DPKT+
Sbjct: 185 DPKTS 189

[Close]
BLAST of MELO3C009607.2 vs. NCBI nr
Match: PNX92194.1 (transmembrane and coiled-coil domains protein 1-like [Trifolium pratense] >PNX92473.1 transmembrane and coiled-coil domains protein 1-like [Trifolium pratense] >PNY11037.1 transmembrane and coiled-coil domains protein 1-like [Trifolium pratense])

HSP 1 Score: 332.0 bits (850), Expect = 1.3e-87
Identity = 167/185 (90.27%), Postives = 178/185 (96.22%), Query Frame = 0 

Query: 7   FSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSK 66
           FS F+YSD LTV+GIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETMKTDS+K
Sbjct: 5   FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 67  ITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLP 126
           I +KKSKTKKIDR+ETSLKESSRDLSLFKFKSG VVALVLFVVFGLLNSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 127 FKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 186
           FKPFGLVMKMSHRGLQG DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGAGAGLFPMP
Sbjct: 125 FKPFGLVMKMSHRGLQGTDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGLFPMP 184

Query: 187 DPKTN 192
           DPKT+
Sbjct: 185 DPKTS 189

[Close]
BLAST of MELO3C009607.2 vs. NCBI nr
Match: XP_004493128.1 (PREDICTED: transmembrane and coiled-coil domain-containing protein 1-like [Cicer arietinum] >XP_004493129.1 PREDICTED: transmembrane and coiled-coil domain-containing protein 1-like [Cicer arietinum])

HSP 1 Score: 330.9 bits (847), Expect = 2.9e-87
Identity = 166/185 (89.73%), Postives = 178/185 (96.22%), Query Frame = 0 

Query: 7   FSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSK 66
           FS F+YSD LTV+GIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETMKTDS+K
Sbjct: 5   FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 67  ITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLP 126
           I +KKSKTKKIDR+ETSLKESSRDLSLFKFKSG VVALVLFVVFGLLNSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 127 FKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 186
           F+PFGLVMKMSHRGLQG DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGAGAGLFPMP
Sbjct: 125 FQPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGLFPMP 184

Query: 187 DPKTN 192
           DPKT+
Sbjct: 185 DPKTS 189

[Close]
BLAST of MELO3C009607.2 vs. TAIR10
Match: AT3G12030.1 (Protein of unknown function DUF106, transmembrane)

HSP 1 Score: 310.5 bits (794), Expect = 7.4e-85
Identity = 160/193 (82.90%), Postives = 179/193 (92.75%), Query Frame = 0 

Query: 3   TIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKT 62
           TIPLF+SF+Y+DSLTV+GIS CTA++CEAISW+LIYRT+SYK+L+ SIDKA KKLETMKT
Sbjct: 4   TIPLFASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKYSIDKATKKLETMKT 63

Query: 63  D--SSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 122
           +  SSK+++KKSKTKKIDR+ETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 64  ENPSSKLSIKKSKTKKIDRVETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 123

Query: 123 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA-- 182
           VVAKLPF P  +V KMSHRGL+G+DPTDC+MAFLY LCSISIRTNLQKFLGFSPPRGA  
Sbjct: 124 VVAKLPFHPITIVKKMSHRGLKGDDPTDCSMAFLYLLCSISIRTNLQKFLGFSPPRGAAG 183

Query: 183 GAGLFPMPDPKTN 192
             GLFPMPDPKTN
Sbjct: 184 AGGLFPMPDPKTN 196

[Close]
BLAST of MELO3C009607.2 vs. TAIR10
Match: AT5G06660.1 (Protein of unknown function DUF106, transmembrane)

HSP 1 Score: 307.8 bits (787), Expect = 4.8e-84
Identity = 163/196 (83.16%), Postives = 181/196 (92.35%), Query Frame = 0 

Query: 1   MAT-IPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLET 60
           MAT IPLF+SF+Y+DSLTV+GIS CTA++CEAISW+LIYRT+SYK+L+SSIDKA+KKLET
Sbjct: 1   MATAIPLFASFKYADSLTVVGISFCTALVCEAISWILIYRTSSYKSLKSSIDKASKKLET 60

Query: 61  MKTD--SSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF 120
           MKTD  SSK+T KKSKTKKIDR+E+SLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF
Sbjct: 61  MKTDNPSSKLTNKKSKTKKIDRVESSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLF 120

Query: 121 EGKVVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRG 180
           EGKVVAKLPF P  +V KMSHRGL+G+D TDC+MAFLY LCSISIRTNLQKFLGFSPPRG
Sbjct: 121 EGKVVAKLPFHPITIVRKMSHRGLKGDDSTDCSMAFLYLLCSISIRTNLQKFLGFSPPRG 180

Query: 181 A--GAGLFPMPDPKTN 192
           A    GLFPMPDPKTN
Sbjct: 181 AAGAGGLFPMPDPKTN 196

[Close]
BLAST of MELO3C009607.2 vs. Swiss-Prot
Match: sp|Q19714|TMCO1_CAEEL (Calcium load-activated calcium channel homolog OS=Caenorhabditis elegans OX=6239 GN=F22B5.10 PE=3 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 9.7e-34
Identity = 75/163 (46.01%), Postives = 107/163 (65.64%), Query Frame = 0 

Query: 14  DSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKITVKKSK 73
           D L ++ I+  TA+  E I+W+L+YR++ YK L++ +DK  KKLE  K +      K  K
Sbjct: 4   DCLLIIAIAFGTALAGEGITWLLVYRSDHYKRLKADMDKKTKKLEKKKQEVGDTNDKNIK 63

Query: 74  TKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGLV 133
            +K++R E  LK ++RD+S+FK KS   + L    +    NS+FEG+VVAKLPF P G +
Sbjct: 64  -RKLEREEERLKATNRDMSMFKMKSMFAIGLAFTALLSTFNSIFEGRVVAKLPFYPIGFI 123

Query: 134 MKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPR 177
             +SHR L GED TDC+  FLY LC++++R NLQK LGF+P R
Sbjct: 124 QGLSHRNLIGEDMTDCSFIFLYILCTMTVRQNLQKILGFAPSR 165

[Close]
BLAST of MELO3C009607.2 vs. Swiss-Prot
Match: sp|Q54TU8|TMCO1_DICDI (Calcium load-activated calcium channel homolog OS=Dictyostelium discoideum OX=44689 GN=tmco1 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.9e-31
Identity = 70/177 (39.55%), Postives = 116/177 (65.54%), Query Frame = 0 

Query: 16  LTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDK---AAKKLETMKTDSSKITVKKS 75
           L +L +S+ +++  E +SW+L+YRT +YK  +++ID+      KL   ++++S ++ K +
Sbjct: 7   LFILFVSIASSLASEGVSWLLVYRTENYKRGKANIDRLQIQLDKLVDQESETSSLSKKGN 66

Query: 76  KTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFKPFGL 135
           K KKI++IE  LK ++++LS  K KS   VA+ +  +F  LN +F+G VV KLPF P G 
Sbjct: 67  KDKKIEKIEEQLKIANKELSFSKMKSMFAVAISMIALFSYLNRIFDGVVVCKLPFVPIGF 126

Query: 136 VMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMPDPK 190
           +  +SHR + G+D TDC+M F+Y +CS+ IR N+Q  LG +PP+   A  + +P+ K
Sbjct: 127 LQGISHRTIAGDDYTDCSMTFIYAICSMFIRNNIQLILGTAPPKTKQANPWALPEEK 183

[Close]
BLAST of MELO3C009607.2 vs. Swiss-Prot
Match: sp|Q3T0N3|TMCO1_BOVIN (Calcium load-activated calcium channel OS=Bos taurus OX=9913 GN=TMCO1 PE=2 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.5e-30
Identity = 74/182 (40.66%), Postives = 105/182 (57.69%), Query Frame = 0 

Query: 9   SFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L ++ ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE          
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-XXXXXXXXX 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
                               RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 188
           P   +  +SHR L G+D TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

[Close]
BLAST of MELO3C009607.2 vs. Swiss-Prot
Match: sp|Q9UM00|TMCO1_HUMAN (Calcium load-activated calcium channel OS=Homo sapiens OX=9606 GN=TMCO1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.5e-30
Identity = 74/182 (40.66%), Postives = 105/182 (57.69%), Query Frame = 0 

Query: 9   SFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L ++ ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE          
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-XXXXXXXXX 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
                               RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 188
           P   +  +SHR L G+D TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

[Close]
BLAST of MELO3C009607.2 vs. Swiss-Prot
Match: sp|Q921L3|TMCO1_MOUSE (Calcium load-activated calcium channel OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 8.5e-30
Identity = 74/182 (40.66%), Postives = 105/182 (57.69%), Query Frame = 0 

Query: 9   SFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSKIT 68
           S  ++D+L ++ ISVCTA++ E I+WVL+YRT+ YK L++ ++K +KKLE          
Sbjct: 2   STMFADTLLIVFISVCTALLAEGITWVLVYRTDKYKRLKAEVEKQSKKLE-XXXXXXXXX 61

Query: 69  VKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLPFK 128
                               RDLS+ + KS   +      + G+ NS+F+G+VVAKLPF 
Sbjct: 62  XXXXXXXXXXXXXXXXXXXXRDLSMVRMKSMFAIGFCFTALMGMFNSIFDGRVVAKLPFT 121

Query: 129 PFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGA--GAGLFPMP 188
           P   +  +SHR L G+D TDC+  FLY LC++SIR N+QK LG +P R A   AG F  P
Sbjct: 122 PLSYIQGLSHRNLLGDDTTDCSFIFLYILCTMSIRQNIQKILGLAPSRAATKQAGGFLGP 181

[Close]
BLAST of MELO3C009607.2 vs. TrEMBL
Match: tr|A0A1S3B750|A0A1S3B750_CUCME (Calcium load-activated calcium channel OS=Cucumis melo OX=3656 GN=LOC103486745 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 5.4e-98
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 

Query: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

[Close]
BLAST of MELO3C009607.2 vs. TrEMBL
Match: tr|A0A0A0LGX0|A0A0A0LGX0_CUCSA (Calcium load-activated calcium channel OS=Cucumis sativus OX=3659 GN=Csa_3G799650 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.8e-97
Identity = 188/191 (98.43%), Postives = 191/191 (100.00%), Query Frame = 0 

Query: 1   MATIPLFSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60
           MATIPLFSSFRYSDSL+V+GISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM
Sbjct: 1   MATIPLFSSFRYSDSLSVVGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETM 60

Query: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120
           KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK
Sbjct: 61  KTDSSKITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGK 120

Query: 121 VVAKLPFKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180
           VVAKLPFKPFGLVMKMSHRGLQG+DPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA
Sbjct: 121 VVAKLPFKPFGLVMKMSHRGLQGDDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGA 180

Query: 181 GLFPMPDPKTN 192
           GLFPMPDPKTN
Sbjct: 181 GLFPMPDPKTN 191

[Close]
BLAST of MELO3C009607.2 vs. TrEMBL
Match: tr|B7FGM9|B7FGM9_MEDTR (Calcium load-activated calcium channel OS=Medicago truncatula OX=3880 GN=11429146 PE=2 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 6.6e-88
Identity = 167/185 (90.27%), Postives = 178/185 (96.22%), Query Frame = 0 

Query: 7   FSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSK 66
           FS F+YSD LTV+GIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETMKTDS+K
Sbjct: 5   FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 67  ITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLP 126
           I +KKSKTKKIDR+ETSLKESSRDLSLFKFKSG VVALVLFVVFGLLNSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 127 FKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 186
           FKPFGLVMKMSHRGLQG DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGAGAGLFPMP
Sbjct: 125 FKPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGLFPMP 184

Query: 187 DPKTN 192
           DPKT+
Sbjct: 185 DPKTS 189

[Close]
BLAST of MELO3C009607.2 vs. TrEMBL
Match: tr|A0A2K3MNU4|A0A2K3MNU4_TRIPR (Calcium load-activated calcium channel OS=Trifolium pratense OX=57577 GN=L195_g007636 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 8.7e-88
Identity = 167/185 (90.27%), Postives = 178/185 (96.22%), Query Frame = 0 

Query: 7   FSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSK 66
           FS F+YSD LTV+GIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETMKTDS+K
Sbjct: 5   FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 67  ITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLP 126
           I +KKSKTKKIDR+ETSLKESSRDLSLFKFKSG VVALVLFVVFGLLNSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 127 FKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 186
           FKPFGLVMKMSHRGLQG DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGAGAGLFPMP
Sbjct: 125 FKPFGLVMKMSHRGLQGTDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGLFPMP 184

Query: 187 DPKTN 192
           DPKT+
Sbjct: 185 DPKTS 189

[Close]
BLAST of MELO3C009607.2 vs. TrEMBL
Match: tr|A0A1S2XSZ0|A0A1S2XSZ0_CICAR (Calcium load-activated calcium channel OS=Cicer arietinum OX=3827 GN=LOC101497706 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.9e-87
Identity = 166/185 (89.73%), Postives = 178/185 (96.22%), Query Frame = 0 

Query: 7   FSSFRYSDSLTVLGISVCTAVICEAISWVLIYRTNSYKTLRSSIDKAAKKLETMKTDSSK 66
           FS F+YSD LTV+GIS CTA++CEAISWVLIYRTNSYK LRSSIDKA+KKLETMKTDS+K
Sbjct: 5   FSDFKYSDGLTVVGISFCTAIVCEAISWVLIYRTNSYKNLRSSIDKASKKLETMKTDSNK 64

Query: 67  ITVKKSKTKKIDRIETSLKESSRDLSLFKFKSGAVVALVLFVVFGLLNSLFEGKVVAKLP 126
           I +KKSKTKKIDR+ETSLKESSRDLSLFKFKSG VVALVLFVVFGLLNSLFEGKVVAKLP
Sbjct: 65  INIKKSKTKKIDRVETSLKESSRDLSLFKFKSGGVVALVLFVVFGLLNSLFEGKVVAKLP 124

Query: 127 FKPFGLVMKMSHRGLQGEDPTDCAMAFLYFLCSISIRTNLQKFLGFSPPRGAGAGLFPMP 186
           F+PFGLVMKMSHRGLQG DPTDC+MAFLYFLCSISIRTNLQKFLGF+PPRGAGAGLFPMP
Sbjct: 125 FQPFGLVMKMSHRGLQGNDPTDCSMAFLYFLCSISIRTNLQKFLGFAPPRGAGAGLFPMP 184

Query: 187 DPKTN 192
           DPKT+
Sbjct: 185 DPKTS 189

The following BLAST results are available for this feature:
BLAST of MELO3C009607.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008443026.18.2e-98100.00PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis me... [more]
XP_004136557.11.2e-9698.43PREDICTED: transmembrane and coiled-coil domain-containing protein 1 [Cucumis sa... [more]
XP_003624576.11.0e-8790.27calcium load-activated calcium channel [Medicago truncatula] >ACJ83908.1 unknown... [more]
PNX92194.11.3e-8790.27transmembrane and coiled-coil domains protein 1-like [Trifolium pratense] >PNX92... [more]
XP_004493128.12.9e-8789.73PREDICTED: transmembrane and coiled-coil domain-containing protein 1-like [Cicer... [more]
BLAST of MELO3C009607.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G12030.17.4e-8582.90Protein of unknown function DUF106, transmembrane[more]
AT5G06660.14.8e-8483.16Protein of unknown function DUF106, transmembrane[more]
BLAST of MELO3C009607.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q19714|TMCO1_CAEEL9.7e-3446.01Calcium load-activated calcium channel homolog OS=Caenorhabditis elegans OX=6239... [more]
sp|Q54TU8|TMCO1_DICDI5.9e-3139.55Calcium load-activated calcium channel homolog OS=Dictyostelium discoideum OX=44... [more]
sp|Q3T0N3|TMCO1_BOVIN8.5e-3040.66Calcium load-activated calcium channel OS=Bos taurus OX=9913 GN=TMCO1 PE=2 SV=1[more]
sp|Q9UM00|TMCO1_HUMAN8.5e-3040.66Calcium load-activated calcium channel OS=Homo sapiens OX=9606 GN=TMCO1 PE=1 SV=... [more]
sp|Q921L3|TMCO1_MOUSE8.5e-3040.66Calcium load-activated calcium channel OS=Mus musculus OX=10090 GN=Tmco1 PE=1 SV... [more]
BLAST of MELO3C009607.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B750|A0A1S3B750_CUCME5.4e-98100.00Calcium load-activated calcium channel OS=Cucumis melo OX=3656 GN=LOC103486745 P... [more]
tr|A0A0A0LGX0|A0A0A0LGX0_CUCSA7.8e-9798.43Calcium load-activated calcium channel OS=Cucumis sativus OX=3659 GN=Csa_3G79965... [more]
tr|B7FGM9|B7FGM9_MEDTR6.6e-8890.27Calcium load-activated calcium channel OS=Medicago truncatula OX=3880 GN=1142914... [more]
tr|A0A2K3MNU4|A0A2K3MNU4_TRIPR8.7e-8890.27Calcium load-activated calcium channel OS=Trifolium pratense OX=57577 GN=L195_g0... [more]
tr|A0A1S2XSZ0|A0A1S2XSZ0_CICAR1.9e-8789.73Calcium load-activated calcium channel OS=Cicer arietinum OX=3827 GN=LOC10149770... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005262calcium channel activity
Vocabulary: Cellular Component
TermDefinition
GO:0030176integral component of endoplasmic reticulum membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0032469endoplasmic reticulum calcium ion homeostasis
Vocabulary: INTERPRO
TermDefinition
IPR008559TMCO1
IPR002809EMC3/TMCO1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0070588 calcium ion transmembrane transport
biological_process GO:0032469 endoplasmic reticulum calcium ion homeostasis
biological_process GO:0008150 biological_process
biological_process GO:0006816 calcium ion transport
cellular_component GO:0030176 integral component of endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005794 Golgi apparatus
molecular_function GO:0005262 calcium channel activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C009607.2.1MELO3C009607.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 43..63
IPR002809Integral membrane protein EMC3/TMCO1-likeSMARTSM01415DUF106_2coord: 14..174
e-value: 1.0E-37
score: 141.3
IPR002809Integral membrane protein EMC3/TMCO1-likePFAMPF01956DUF106coord: 16..173
e-value: 3.1E-31
score: 108.3
IPR008559Calcium load-activated calcium channelPIRSFPIRSF023322UCP023322_TM_coiled-coilcoord: 5..191
e-value: 9.8E-75
score: 248.2
IPR008559Calcium load-activated calcium channelPANTHERPTHR20917PNAS-RELATEDcoord: 11..190