Csa3G282490 (gene) Cucumber (Chinese Long) v2

NameCsa3G282490
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionTranscription factor, putative; contains IPR011598 (Myc-type, basic helix-loop-helix (bHLH) domain)
LocationChr3 : 16705531 .. 16707465 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCTGAAAACACATCACCAAGCTCACTTTCCAATTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGGACACGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAGCAAGTGTCAATTCTCCATCAAATTCTTTCTATTGATTTGAACTTATATTTTCTCTCTTTGAGCTTTAGATATGCATCATATTTGTTATTTTGTTTACTCAGAACATGGAAGGAGGGAGGAAAAGAAGGAATTATGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAGAGGGTATTTACTAAATTATGCAATATTTCTTCCTAAACACAATTAGTTTTAAGGATTGATATACTGATCTTCAATATAGAAATCAATAACCGAATAATCCAATAATAAAACAGTCTTCATATTTCAGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGGTAAATTGTTTTTTTCATGGTCCAGTACAAAACATTGGAGTCTCAACTCTCATGTTCAAACAAAATTTCCAAATTATTTTGCAGTCAATGGGCATGGCGATGGTGTTGGATGAGACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGGTGAGGAATATGATAAACTTTTCATAAGTATCAATAATGTTTTCATTTAATAGCTCTGATGGACTTACTTTGTTCCTGAATTCAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGTACTCCAACAACTACCCAAAAGTTTATTAACTTTTGACATTTTACTTTCTACAAATGAAACCATGGAGTAAATTAGTGCCTACTTTAACTGATTTTGATTAGGGATCTGTTTCTGAAAGCATGGGAGGAAGTTACTTTTACTTTTTCATTTTGCAAAGCAAGTTACTTCCTTTATGGCAAAAATAGAAGTATGACTAGGAGAATGAAAAAAAAAAGAATAATAAAGAAACGTATAGGCACTCGTTTATTTCAGTTCACACAAGTTCTTCACTCGCCTCACTTTTTGTCTTCATAACTTCTCCTTACACAAATTTTCTCTCCACCTACCTCAAGATAATTCCTTTTGAAGAGTTTGGGTGTTGAATAAGAATCTACCACTCACACTGACGGAAAAAAAGAAACCAGGGAGGGAGGGATGTCAAGTGCAATGATATTTATTGATAGATCAACAGAAAAATGGTGTTCATTGGCTAGAGGAAGGGTAGAAGTAGGGTGGGTTTAAAAAGAAGGATAAAAAGTTAATTTTTGTCCAGACTTAATTTAACAAAAAGATCCAAAAATATGGTGGATCAAATGAGCCAGTTTGATTGGACAAAACTAAATTCCCAGGCAATCAAACAATATAAAATAAACTTCTTGCTAAGTATGGAATTCAAATTGGTGCTTTCTTTATTTATTAATATTAAAGTATTGATGTTTAAGCTTTAATTATAACACTGCAGGGGACAAGATCACATGAGGAATAGAAGATAAAGAAATTAGATGAGGAAATGATAAAGAAAGCACAGTTGCTTCCACTTGATTAAGCCCTTTTTGACTGCAAATGGGGCATTTGTTATCTATCTGTTGTCACAAACCACATGAGTTTGCTTCCTA

mRNA sequence

ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCTGAAAACACATCACCAAGCTCACTTTCCAATTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGGACACGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAAACATGGAAGGAGGGAGGAAAAGAAGGAATTATGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAGAGGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGTCAATGGGCATGGCGATGGTGTTGGATGAGACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGGGACAAGATCACATGAGGAATAG

Coding sequence (CDS)

ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCTGAAAACACATCACCAAGCTCACTTTCCAATTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGGACACGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAAACATGGAAGGAGGGAGGAAAAGAAGGAATTATGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAGAGGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGTCAATGGGCATGGCGATGGTGTTGGATGAGACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGGGACAAGATCACATGAGGAATAG

Protein sequence

MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE*
BLAST of Csa3G282490 vs. Swiss-Prot
Match: BEE3_ARATH (Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-34
Identity = 88/192 (45.83%), Postives = 116/192 (60.42%), Query Frame = 1

Query: 27  SSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSGHETMKRKE-- 86
           SS+++ + +H Q P++    SL N     +      FP   +++    S  +T KRK   
Sbjct: 39  SSLDSLF-FHNQFPDHFPGKSLENNFHQGIF-----FPSNIQNNEESSSQFDTKKRKSLM 98

Query: 87  KQVSERNSGILCAAFGNDSSNAR-----SSKNMEGGRKRRNYEKEQEKPGEVVHVRAKRG 146
           + VS   + +        S+        S+KN    R +R+  +E+EK  EVVHVRA+RG
Sbjct: 99  EAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRSKNREEEKEREVVHVRARRG 158

Query: 147 QATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSM 206
           QATDSHS+AERVRR KIN +LKCLQ+I+PGC+K+MGMA +LDE INYV SLQNQVEFLSM
Sbjct: 159 QATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSM 218

Query: 207 ELAAACSTLGIN 212
           +L AA S    N
Sbjct: 219 KLTAASSYYDFN 224

BLAST of Csa3G282490 vs. Swiss-Prot
Match: BEE1_ARATH (Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.8e-34
Identity = 95/205 (46.34%), Postives = 122/205 (59.51%), Query Frame = 1

Query: 20  EDFNETESSVENFWGYHFQ-----LPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVD 79
           + F+ + +S+E+ + +H Q      P N SP S +NFSS             T S L  D
Sbjct: 38  QTFHPSSTSLESLFLHHHQQQLLHFPGN-SPDSSNNFSS-------------TSSFLHSD 97

Query: 80  SG--HETMKRKE---KQVSERNSGILCAAFGNDSSNARSSKN---MEGGRKRRNYEKEQE 139
                ET KRK       S   SG+      +D++N  +++      G R ++  E+E E
Sbjct: 98  HNIVDETKKRKALLPTLSSSETSGV------SDNTNVIATETGSLRRGKRLKKKKEEEDE 157

Query: 140 KPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINY 199
           K  EVVHVRA+RGQATDSHSLAERVRR KIN +L+CLQ+++PGC+K+MGMA +LDE INY
Sbjct: 158 KEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINY 217

Query: 200 VYSLQNQVEFLSMELAAACSTLGIN 212
           V SLQNQVEFLSM+L AA S    N
Sbjct: 218 VQSLQNQVEFLSMKLTAASSFYDFN 222

BLAST of Csa3G282490 vs. Swiss-Prot
Match: BH075_ARATH (Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.1e-31
Identity = 67/117 (57.26%), Postives = 88/117 (75.21%), Query Frame = 1

Query: 103 SSNARSSKNMEGGRKRRNYEKEQE--------KPGEVVHVRAKRGQATDSHSLAERVRRE 162
           ++  + +K   G ++RR   +E+E        KP +VVHVRAKRGQATDSHSLAERVRRE
Sbjct: 65  NTRRKGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRRE 124

Query: 163 KINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGIN 212
           KIN +LKCLQ+++PGC+K+MGMA++LD  I+YV SLQNQ+EFLSM+L+AA +   +N
Sbjct: 125 KINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181

BLAST of Csa3G282490 vs. Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 2.3e-26
Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 1

Query: 69  SSLPVDSGHETMKRKEKQVSERNSGILCAAFGN-----DSSNARSSKNMEGGRKRRNYEK 128
           S +P       + RK K  S++NS    ++        DS   R  K+ E G K ++ + 
Sbjct: 192 SHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDP 251

Query: 129 EQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDET 188
            ++     +HVRA+RGQATDSHSLAERVRREKI+ ++K LQ+++PGC+K  G A++LDE 
Sbjct: 252 YKD----YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 311

Query: 189 INYVYSLQNQVEFLSMELAAACSTLGIN 212
           INYV SLQ QVEFLSM+L++  + L  N
Sbjct: 312 INYVQSLQRQVEFLSMKLSSVNTRLDFN 335

BLAST of Csa3G282490 vs. Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.7e-26
Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1

Query: 100 GNDSSNARSSKNMEGGRKRRNYEK--EQEKPGEVVHVRAKRGQATDSHSLAERVRREKIN 159
           G  + N+ +SK    GRK +  ++  ++E P + +HVRA+RGQATDSHSLAERVRREKI+
Sbjct: 100 GRKARNSNNSKEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKIS 159

Query: 160 HKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAA 204
            +++ LQN++PGC K  G A++LDE INYV +LQ QVEFLSM+L +
Sbjct: 160 ERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTS 205

BLAST of Csa3G282490 vs. TrEMBL
Match: A0A0A0LCH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G282490 PE=4 SV=1)

HSP 1 Score: 458.4 bits (1178), Expect = 5.2e-126
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60

Query: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 120
           KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN
Sbjct: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 120

Query: 121 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL 180
           YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL
Sbjct: 121 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL 180

Query: 181 DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 229
           DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE
Sbjct: 181 DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 228

BLAST of Csa3G282490 vs. TrEMBL
Match: A0A061EIH6_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_019445 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 9.4e-43
Identity = 103/230 (44.78%), Postives = 141/230 (61.30%), Query Frame = 1

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           M  +ME+  Q S    + LE+F+  + S+E    +  QLPE ++  +  N S+  L    
Sbjct: 4   MDISMEMTKQSSELNSTLLENFSIADFSLETLLAH--QLPEYSASCTHDNLSTTVLAGSL 63

Query: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGND----SSNARSSKNMEGGR 120
              P     ++  D   E+ KRK  + S  N   +  A        +++ R    +  G+
Sbjct: 64  TAIPTARTVTVDEDVFIESKKRKAMEQSTSNYQSISPAVSTTEIGGNTSTRKRNRLGKGK 123

Query: 121 KRRNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGM 180
           K ++ EK+ EK  EV+HVRA+RGQATDSHSLAERVRREKIN K++CLQ+++PGCHK+MGM
Sbjct: 124 KGKSNEKQPEKAEEVIHVRARRGQATDSHSLAERVRREKINEKMRCLQDLVPGCHKTMGM 183

Query: 181 AMVLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSH 227
           A++LDE INYV+SLQNQVEFLSMELAAA S   +N      +KA GT SH
Sbjct: 184 AVMLDEIINYVHSLQNQVEFLSMELAAASSAYDLNLETECIKKAQGTNSH 231

BLAST of Csa3G282490 vs. TrEMBL
Match: U5GG63_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15590g PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.0e-41
Identity = 105/227 (46.26%), Postives = 143/227 (63.00%), Query Frame = 1

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           M  NME++        S LE F+ T+ S ++      Q PE T+    +N SS       
Sbjct: 21  MDMNMEMLKHLPEMNPSILESFSITDFSADSLLAR--QQPEFTATYDHNNLSSTFHPDIL 80

Query: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 120
               V+   +L  +  H++ KRK  + S  +S I   A  N++   +   N+ G +K  N
Sbjct: 81  STATVVHTVTLNQNDSHDSKKRKSMEQST-SSYISPTASTNET---KKKNNLGGSKKGEN 140

Query: 121 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL 180
            EKE +K  EV+HVRAKRGQATDSHS+AERVRREKIN+KL+CLQ+++PGCH+SMGMA++L
Sbjct: 141 KEKEGDKAEEVIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAVML 200

Query: 181 DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHE 228
           +E INYV+SLQNQVEFLSMELAAA S+  +N     +++A GT S E
Sbjct: 201 EEIINYVHSLQNQVEFLSMELAAASSSNDLNNLTESSKRAQGTDSTE 241

BLAST of Csa3G282490 vs. TrEMBL
Match: A0A067EV90_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017964mg PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 2.6e-40
Identity = 100/228 (43.86%), Postives = 137/228 (60.09%), Query Frame = 1

Query: 4   NMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEF 63
           NME++  F+    S LE FN    S+     +  Q PE  +  S +N  S      +   
Sbjct: 23  NMEMVKHFAELKPSMLEYFNTPNFSLATPLAH--QQPEFLAGCSYNNSFSNFQTDSRIVV 82

Query: 64  PVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNME----GGRKRR 123
           P +       D  +E+ +R+  + S   S  +C++     +   + KN +     G+K  
Sbjct: 83  PRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVS 142

Query: 124 NYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMV 183
           + EKE+  P  ++HVRAKRGQATDSHS+AERVRREKIN K++CLQ+++PGCHK MGMA +
Sbjct: 143 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 202

Query: 184 LDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHE 228
           L+E INYV+SLQNQVEFLSMELAAACS+  +N     +RK  GT SHE
Sbjct: 203 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHE 248

BLAST of Csa3G282490 vs. TrEMBL
Match: V4STF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012453mg PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 3.3e-40
Identity = 100/228 (43.86%), Postives = 137/228 (60.09%), Query Frame = 1

Query: 4   NMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEF 63
           NME++  F+    S LE FN    S+     +  Q PE  +  S +N  S      +   
Sbjct: 23  NMEMVKHFAELKPSMLEYFNTPNFSLATPLAH--QQPEFLAGCSYNNSFSNFQTDSRIVV 82

Query: 64  PVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNME----GGRKRR 123
           P +       D  +E+ +R+  + S   S  +C++     +   + KN +     G+K  
Sbjct: 83  PRVHTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVS 142

Query: 124 NYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMV 183
           + EKE+  P  ++HVRAKRGQATDSHS+AERVRREKIN K++CLQ+++PGCHK MGMA +
Sbjct: 143 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 202

Query: 184 LDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHE 228
           L+E INYV+SLQNQVEFLSMELAAACS+  +N     +RK  GT SHE
Sbjct: 203 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHE 248

BLAST of Csa3G282490 vs. TAIR10
Match: AT1G73830.1 (AT1G73830.1 BR enhanced expression 3)

HSP 1 Score: 147.1 bits (370), Expect = 1.3e-35
Identity = 88/192 (45.83%), Postives = 116/192 (60.42%), Query Frame = 1

Query: 27  SSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSGHETMKRKE-- 86
           SS+++ + +H Q P++    SL N     +      FP   +++    S  +T KRK   
Sbjct: 39  SSLDSLF-FHNQFPDHFPGKSLENNFHQGIF-----FPSNIQNNEESSSQFDTKKRKSLM 98

Query: 87  KQVSERNSGILCAAFGNDSSNAR-----SSKNMEGGRKRRNYEKEQEKPGEVVHVRAKRG 146
           + VS   + +        S+        S+KN    R +R+  +E+EK  EVVHVRA+RG
Sbjct: 99  EAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSRRGKRSKNREEEKEREVVHVRARRG 158

Query: 147 QATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSM 206
           QATDSHS+AERVRR KIN +LKCLQ+I+PGC+K+MGMA +LDE INYV SLQNQVEFLSM
Sbjct: 159 QATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQVEFLSM 218

Query: 207 ELAAACSTLGIN 212
           +L AA S    N
Sbjct: 219 KLTAASSYYDFN 224

BLAST of Csa3G282490 vs. TAIR10
Match: AT1G18400.1 (AT1G18400.1 BR enhanced expression 1)

HSP 1 Score: 145.2 bits (365), Expect = 4.9e-35
Identity = 95/205 (46.34%), Postives = 122/205 (59.51%), Query Frame = 1

Query: 20  EDFNETESSVENFWGYHFQ-----LPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVD 79
           + F+ + +S+E+ + +H Q      P N SP S +NFSS             T S L  D
Sbjct: 38  QTFHPSSTSLESLFLHHHQQQLLHFPGN-SPDSSNNFSS-------------TSSFLHSD 97

Query: 80  SG--HETMKRKE---KQVSERNSGILCAAFGNDSSNARSSKN---MEGGRKRRNYEKEQE 139
                ET KRK       S   SG+      +D++N  +++      G R ++  E+E E
Sbjct: 98  HNIVDETKKRKALLPTLSSSETSGV------SDNTNVIATETGSLRRGKRLKKKKEEEDE 157

Query: 140 KPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINY 199
           K  EVVHVRA+RGQATDSHSLAERVRR KIN +L+CLQ+++PGC+K+MGMA +LDE INY
Sbjct: 158 KEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINY 217

Query: 200 VYSLQNQVEFLSMELAAACSTLGIN 212
           V SLQNQVEFLSM+L AA S    N
Sbjct: 218 VQSLQNQVEFLSMKLTAASSFYDFN 222

BLAST of Csa3G282490 vs. TAIR10
Match: AT1G25330.1 (AT1G25330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.3e-32
Identity = 67/117 (57.26%), Postives = 88/117 (75.21%), Query Frame = 1

Query: 103 SSNARSSKNMEGGRKRRNYEKEQE--------KPGEVVHVRAKRGQATDSHSLAERVRRE 162
           ++  + +K   G ++RR   +E+E        KP +VVHVRAKRGQATDSHSLAERVRRE
Sbjct: 65  NTRRKGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRRE 124

Query: 163 KINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGIN 212
           KIN +LKCLQ+++PGC+K+MGMA++LD  I+YV SLQNQ+EFLSM+L+AA +   +N
Sbjct: 125 KINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181

BLAST of Csa3G282490 vs. TAIR10
Match: AT3G07340.1 (AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27
Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 1

Query: 69  SSLPVDSGHETMKRKEKQVSERNSGILCAAFGN-----DSSNARSSKNMEGGRKRRNYEK 128
           S +P       + RK K  S++NS    ++        DS   R  K+ E G K ++ + 
Sbjct: 192 SHVPAGESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDP 251

Query: 129 EQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDET 188
            ++     +HVRA+RGQATDSHSLAERVRREKI+ ++K LQ+++PGC+K  G A++LDE 
Sbjct: 252 YKD----YIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEI 311

Query: 189 INYVYSLQNQVEFLSMELAAACSTLGIN 212
           INYV SLQ QVEFLSM+L++  + L  N
Sbjct: 312 INYVQSLQRQVEFLSMKLSSVNTRLDFN 335

BLAST of Csa3G282490 vs. TAIR10
Match: AT5G50915.1 (AT5G50915.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 119.0 bits (297), Expect = 3.8e-27
Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1

Query: 100 GNDSSNARSSKNMEGGRKRRNYEK--EQEKPGEVVHVRAKRGQATDSHSLAERVRREKIN 159
           G  + N+ +SK    GRK +  ++  ++E P + +HVRA+RGQATDSHSLAERVRREKI+
Sbjct: 100 GRKARNSNNSKEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRREKIS 159

Query: 160 HKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAA 204
            +++ LQN++PGC K  G A++LDE INYV +LQ QVEFLSM+L +
Sbjct: 160 ERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTS 205

BLAST of Csa3G282490 vs. NCBI nr
Match: gi|778680713|ref|XP_011651380.1| (PREDICTED: transcription factor BEE 3-like isoform X4 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 7.5e-126
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 120
           KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN
Sbjct: 80  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 139

Query: 121 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL 180
           YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL
Sbjct: 140 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL 199

Query: 181 DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 229
           DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE
Sbjct: 200 DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 247

BLAST of Csa3G282490 vs. NCBI nr
Match: gi|700202628|gb|KGN57761.1| (hypothetical protein Csa_3G282490 [Cucumis sativus])

HSP 1 Score: 458.4 bits (1178), Expect = 7.5e-126
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60

Query: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 120
           KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN
Sbjct: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 120

Query: 121 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL 180
           YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL
Sbjct: 121 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL 180

Query: 181 DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 229
           DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE
Sbjct: 181 DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 228

BLAST of Csa3G282490 vs. NCBI nr
Match: gi|778680705|ref|XP_011651377.1| (PREDICTED: transcription factor BEE 3-like isoform X1 [Cucumis sativus])

HSP 1 Score: 443.4 bits (1139), Expect = 2.5e-121
Identity = 228/256 (89.06%), Postives = 228/256 (89.06%), Query Frame = 1

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 120
           KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN
Sbjct: 80  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 139

Query: 121 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHK-------- 180
           YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHK        
Sbjct: 140 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKVNCFFHGP 199

Query: 181 --------------------SMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGINF 229
                               SMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGINF
Sbjct: 200 VQNIGVSTLMFKQNFQIILQSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGINF 259

BLAST of Csa3G282490 vs. NCBI nr
Match: gi|659114293|ref|XP_008456996.1| (PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 408.3 bits (1048), Expect = 8.9e-111
Identity = 207/218 (94.95%), Postives = 209/218 (95.87%), Query Frame = 1

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNA ES LEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 120
           K+FPVITRSSL VDS  ETMKRKEKQVSE NSGILCAAFGNDSSNARSSKN+ GGRKRRN
Sbjct: 80  KDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGNDSSNARSSKNLGGGRKRRN 139

Query: 121 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL 180
            EKEQEKPG VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL
Sbjct: 140 CEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVL 199

Query: 181 DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 219
           DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR
Sbjct: 200 DETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 236

BLAST of Csa3G282490 vs. NCBI nr
Match: gi|778680707|ref|XP_011651378.1| (PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis sativus])

HSP 1 Score: 404.4 bits (1038), Expect = 1.3e-109
Identity = 209/237 (88.19%), Postives = 209/237 (88.19%), Query Frame = 1

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 120
           KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN
Sbjct: 80  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRN 139

Query: 121 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHK-------- 180
           YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHK        
Sbjct: 140 YEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKVNCFFHGP 199

Query: 181 --------------------SMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLG 210
                               SMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLG
Sbjct: 200 VQNIGVSTLMFKQNFQIILQSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLG 256

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
BEE3_ARATH2.3e-3445.83Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2 SV=1[more]
BEE1_ARATH8.8e-3446.34Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2 SV=1[more]
BH075_ARATH4.1e-3157.26Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2 SV=1[more]
BH062_ARATH2.3e-2645.27Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1[more]
BH137_ARATH6.7e-2654.72Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LCH4_CUCSA5.2e-126100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G282490 PE=4 SV=1[more]
A0A061EIH6_THECC9.4e-4344.78Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma ca... [more]
U5GG63_POPTR1.0e-4146.26Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15590g PE=4 SV=1[more]
A0A067EV90_CITSI2.6e-4043.86Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017964mg PE=4 SV=1[more]
V4STF1_9ROSI3.3e-4043.86Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012453mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G73830.11.3e-3545.83 BR enhanced expression 3[more]
AT1G18400.14.9e-3546.34 BR enhanced expression 1[more]
AT1G25330.12.3e-3257.26 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT3G07340.11.3e-2745.27 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G50915.13.8e-2754.72 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778680713|ref|XP_011651380.1|7.5e-126100.00PREDICTED: transcription factor BEE 3-like isoform X4 [Cucumis sativus][more]
gi|700202628|gb|KGN57761.1|7.5e-126100.00hypothetical protein Csa_3G282490 [Cucumis sativus][more]
gi|778680705|ref|XP_011651377.1|2.5e-12189.06PREDICTED: transcription factor BEE 3-like isoform X1 [Cucumis sativus][more]
gi|659114293|ref|XP_008456996.1|8.9e-11194.95PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis melo][more]
gi|778680707|ref|XP_011651378.1|1.3e-10988.19PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis sativus][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0009298 GDP-mannose biosynthetic process
biological_process GO:0006013 mannose metabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0004476 mannose-6-phosphate isomerase activity
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G282490.1Csa3G282490.1mRNA


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 140..202
score: 9.4
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 144..191
score: 3.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 146..196
score: 5.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 140..190
score: 14
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 138..203
score: 7.72
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 8..18
score: 3.8E-58coord: 73..204
score: 3.8
NoneNo IPR availablePANTHERPTHR12565:SF128TRANSCRIPTION FACTOR BHLH75coord: 8..18
score: 3.8E-58coord: 73..204
score: 3.8