Csa3G282490 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCTGAAAACACATCACCAAGCTCACTTTCCAATTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGGACACGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAGCAAGTGTCAATTCTCCATCAAATTCTTTCTATTGATTTGAACTTATATTTTCTCTCTTTGAGCTTTAGATATGCATCATATTTGTTATTTTGTTTACTCAGAACATGGAAGGAGGGAGGAAAAGAAGGAATTATGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAGAGGGTATTTACTAAATTATGCAATATTTCTTCCTAAACACAATTAGTTTTAAGGATTGATATACTGATCTTCAATATAGAAATCAATAACCGAATAATCCAATAATAAAACAGTCTTCATATTTCAGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGGTAAATTGTTTTTTTCATGGTCCAGTACAAAACATTGGAGTCTCAACTCTCATGTTCAAACAAAATTTCCAAATTATTTTGCAGTCAATGGGCATGGCGATGGTGTTGGATGAGACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGGTGAGGAATATGATAAACTTTTCATAAGTATCAATAATGTTTTCATTTAATAGCTCTGATGGACTTACTTTGTTCCTGAATTCAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGTACTCCAACAACTACCCAAAAGTTTATTAACTTTTGACATTTTACTTTCTACAAATGAAACCATGGAGTAAATTAGTGCCTACTTTAACTGATTTTGATTAGGGATCTGTTTCTGAAAGCATGGGAGGAAGTTACTTTTACTTTTTCATTTTGCAAAGCAAGTTACTTCCTTTATGGCAAAAATAGAAGTATGACTAGGAGAATGAAAAAAAAAAGAATAATAAAGAAACGTATAGGCACTCGTTTATTTCAGTTCACACAAGTTCTTCACTCGCCTCACTTTTTGTCTTCATAACTTCTCCTTACACAAATTTTCTCTCCACCTACCTCAAGATAATTCCTTTTGAAGAGTTTGGGTGTTGAATAAGAATCTACCACTCACACTGACGGAAAAAAAGAAACCAGGGAGGGAGGGATGTCAAGTGCAATGATATTTATTGATAGATCAACAGAAAAATGGTGTTCATTGGCTAGAGGAAGGGTAGAAGTAGGGTGGGTTTAAAAAGAAGGATAAAAAGTTAATTTTTGTCCAGACTTAATTTAACAAAAAGATCCAAAAATATGGTGGATCAAATGAGCCAGTTTGATTGGACAAAACTAAATTCCCAGGCAATCAAACAATATAAAATAAACTTCTTGCTAAGTATGGAATTCAAATTGGTGCTTTCTTTATTTATTAATATTAAAGTATTGATGTTTAAGCTTTAATTATAACACTGCAGGGGACAAGATCACATGAGGAATAGAAGATAAAGAAATTAGATGAGGAAATGATAAAGAAAGCACAGTTGCTTCCACTTGATTAAGCCCTTTTTGACTGCAAATGGGGCATTTGTTATCTATCTGTTGTCACAAACCACATGAGTTTGCTTCCTA ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCTGAAAACACATCACCAAGCTCACTTTCCAATTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGGACACGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAAACATGGAAGGAGGGAGGAAAAGAAGGAATTATGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAGAGGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGTCAATGGGCATGGCGATGGTGTTGGATGAGACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGGGACAAGATCACATGAGGAATAG ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCTGAAAACACATCACCAAGCTCACTTTCCAATTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGGACACGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAAACATGGAAGGAGGGAGGAAAAGAAGGAATTATGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAGAGGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGTCAATGGGCATGGCGATGGTGTTGGATGAGACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGGGACAAGATCACATGAGGAATAG MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE*
BLAST of Csa3G282490 vs. Swiss-Prot
Match: BEE3_ARATH (Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 2.3e-34 Identity = 88/192 (45.83%), Postives = 116/192 (60.42%), Query Frame = 1
BLAST of Csa3G282490 vs. Swiss-Prot
Match: BEE1_ARATH (Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 8.8e-34 Identity = 95/205 (46.34%), Postives = 122/205 (59.51%), Query Frame = 1
BLAST of Csa3G282490 vs. Swiss-Prot
Match: BH075_ARATH (Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 4.1e-31 Identity = 67/117 (57.26%), Postives = 88/117 (75.21%), Query Frame = 1
BLAST of Csa3G282490 vs. Swiss-Prot
Match: BH062_ARATH (Transcription factor bHLH62 OS=Arabidopsis thaliana GN=BHLH62 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 2.3e-26 Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 1
BLAST of Csa3G282490 vs. Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 6.7e-26 Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1
BLAST of Csa3G282490 vs. TrEMBL
Match: A0A0A0LCH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G282490 PE=4 SV=1) HSP 1 Score: 458.4 bits (1178), Expect = 5.2e-126 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1
BLAST of Csa3G282490 vs. TrEMBL
Match: A0A061EIH6_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_019445 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 9.4e-43 Identity = 103/230 (44.78%), Postives = 141/230 (61.30%), Query Frame = 1
BLAST of Csa3G282490 vs. TrEMBL
Match: U5GG63_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15590g PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.0e-41 Identity = 105/227 (46.26%), Postives = 143/227 (63.00%), Query Frame = 1
BLAST of Csa3G282490 vs. TrEMBL
Match: A0A067EV90_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017964mg PE=4 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.6e-40 Identity = 100/228 (43.86%), Postives = 137/228 (60.09%), Query Frame = 1
BLAST of Csa3G282490 vs. TrEMBL
Match: V4STF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012453mg PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 3.3e-40 Identity = 100/228 (43.86%), Postives = 137/228 (60.09%), Query Frame = 1
BLAST of Csa3G282490 vs. TAIR10
Match: AT1G73830.1 (AT1G73830.1 BR enhanced expression 3) HSP 1 Score: 147.1 bits (370), Expect = 1.3e-35 Identity = 88/192 (45.83%), Postives = 116/192 (60.42%), Query Frame = 1
BLAST of Csa3G282490 vs. TAIR10
Match: AT1G18400.1 (AT1G18400.1 BR enhanced expression 1) HSP 1 Score: 145.2 bits (365), Expect = 4.9e-35 Identity = 95/205 (46.34%), Postives = 122/205 (59.51%), Query Frame = 1
BLAST of Csa3G282490 vs. TAIR10
Match: AT1G25330.1 (AT1G25330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 136.3 bits (342), Expect = 2.3e-32 Identity = 67/117 (57.26%), Postives = 88/117 (75.21%), Query Frame = 1
BLAST of Csa3G282490 vs. TAIR10
Match: AT3G07340.1 (AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-27 Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = 1
BLAST of Csa3G282490 vs. TAIR10
Match: AT5G50915.1 (AT5G50915.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein) HSP 1 Score: 119.0 bits (297), Expect = 3.8e-27 Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1
BLAST of Csa3G282490 vs. NCBI nr
Match: gi|778680713|ref|XP_011651380.1| (PREDICTED: transcription factor BEE 3-like isoform X4 [Cucumis sativus]) HSP 1 Score: 458.4 bits (1178), Expect = 7.5e-126 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1
BLAST of Csa3G282490 vs. NCBI nr
Match: gi|700202628|gb|KGN57761.1| (hypothetical protein Csa_3G282490 [Cucumis sativus]) HSP 1 Score: 458.4 bits (1178), Expect = 7.5e-126 Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 1
BLAST of Csa3G282490 vs. NCBI nr
Match: gi|778680705|ref|XP_011651377.1| (PREDICTED: transcription factor BEE 3-like isoform X1 [Cucumis sativus]) HSP 1 Score: 443.4 bits (1139), Expect = 2.5e-121 Identity = 228/256 (89.06%), Postives = 228/256 (89.06%), Query Frame = 1
BLAST of Csa3G282490 vs. NCBI nr
Match: gi|659114293|ref|XP_008456996.1| (PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis melo]) HSP 1 Score: 408.3 bits (1048), Expect = 8.9e-111 Identity = 207/218 (94.95%), Postives = 209/218 (95.87%), Query Frame = 1
BLAST of Csa3G282490 vs. NCBI nr
Match: gi|778680707|ref|XP_011651378.1| (PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis sativus]) HSP 1 Score: 404.4 bits (1038), Expect = 1.3e-109 Identity = 209/237 (88.19%), Postives = 209/237 (88.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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