CSPI03G20800 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G20800
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTranscription factor, putative
LocationChr3 : 16822598 .. 16824400 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCCGAAAACACATCACCAAGCTCACTTTCCAACTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGCACAAGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAGCAAGTGTCAATTCTCCATCAAATTCTTTCTATTGATTTGAACTTATATTTTCTCTCTTTGAGCATTAGATATGCATCATATTTGTTATTTTGTTTACTCAGAACATGGAAGGAGGGAGGAAAAGAAGGAATTGTGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAAAGGGTATTTACTAAATTATGCAATATTTCTTCCTAAACACAATTAGTTTTAAGGATTGATATACTGATCTTCAATATAGAAAACAATAACCGAATAATCCAATAATAAAACAGTCTTCATATTTCAGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGGTAAATTGTTTTTTTCATGGTCCAGTACAAAACATTGGAGTCTCAACTCTCATGTTCAAACAAAATTTCCAAATTATTTTGCAGTCAATGGGCATGGCGATGGTGTTGGATGAAACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGGTGAGGAATATGATAAACTTTTCATAAGTATCAATAATGTTTTCATTTAATAGCTCTGATGGACTTACTTTGTTCCTGAATTCAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGTACTCCAACAACTACCCAAAAGTTTATTAACTTTTGACATTTTACTTTCTACTAATGAAACCATGGAGTAAATTAGTGCCTACTTTAACTGATTTTGATTAGGGATCTGTTTCTGAAAGCATGGGAGGAAGTTACTTTTACTTTTTCATTTTGCAAAGCAAGTTACTTCCTTTATGGCAAAAATAGAAGTATGACTAGGAGAATGAAAAAAAAAAAGAATAATAAAGAAACGTATAGGCACTCGTTTATTTCAGTTCACACGAGATCTTCACTCGCCTCACTTTTTGTCTTCATAACTTCTCCTTACACAAATTTTCTCTCCACCTACCTCAAGATAATTCCTTTTGAAGAGTTTGGGTGTTGAATAAGAATCTACCATTCACACTGACGGAAAAAAAGAAACGAGGGAGGGAGGGATGTCAAGTGCAATGATATTTATTGATAGATCAACAGAAAAATGGTGTTCATTGGCTAGAGGAAGGGTAGAAGTAGGGTGGGTTTAAAAAGAAGGATAAAAAGTTAATTTTTGTCCAGACTTAATTTAACAAAAAGATCCAAAAATATGGTGGATCAAATGAGCCAGTTTGATTGGACAAAACTAAATTCCCAGGCAATCAAACAATATAAAATAAACTTCTTGCTAAGTATGGAATTCAAATTGGTGCTTTCTTTATTTATTAATATTAAAGTATTGATGTTTAAGCTTTAATTATAACACTGCAGGGGACAAGATCACATGAGGAA

mRNA sequence

ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCCGAAAACACATCACCAAGCTCACTTTCCAACTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGCACAAGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAGCAAGTAACATGGAAGGAGGGAGGAAAAGAAGGAATTGTGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGTCAATGGGCATGGCGATGGTGTTGGATGAAACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGGGACAAGATCACATGAGGAA

Coding sequence (CDS)

ATGACCTTCAATATGGAAGTGATAAACCAGTTCTCTAATGCGATGGAGAGTGCGTTAGAGGATTTCAATGAAACAGAATCGTCAGTGGAAAATTTCTGGGGCTACCATTTCCAGTTACCCGAAAACACATCACCAAGCTCACTTTCCAACTTTTCTTCTGTTGCTCTACTGAAATGTCAGAAAGAGTTTCCAGTGATAACTCGAAGCAGTCTACCGGTAGATAGTGCACAAGAAACCATGAAAAGAAAAGAGAAACAAGTATCAGAAAGAAATTCAGGAATCCTTTGTGCAGCTTTTGGAAATGACAGTAGTAATGCTAGGTCTTCAAAAGCAAGTAACATGGAAGGAGGGAGGAAAAGAAGGAATTGTGAGAAAGAACAAGAAAAGCCTGGAGAAGTAGTTCATGTTAGAGCAAAACGAGGTCAAGCTACAGATAGTCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAAAATCAACCACAAATTAAAATGCTTGCAAAACATTATTCCAGGTTGTCACAAGTCAATGGGCATGGCGATGGTGTTGGATGAAACTATCAATTATGTTTATTCACTACAGAATCAGGTCGAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCACTTTAGGCATAAATTTTGGCATGGGGGATAACAGAAAAGCTTTGGGGACAAGATCACATGAGGAA
Homology
[Close]
BLAST of CSPI03G20800 vs. Swiss-Prot
Match: BEE1_ARATH (Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.0e-31
Identity = 94/205 (45.85%), Postives = 127/205 (61.95%), Query Frame = 1 

Query: 20  EDFNETESSVENFWGYHFQ-----LPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVD 79
           + F+ + +S+E+ + +H Q      P N SP S +NFSS             T S L  D
Sbjct: 38  QTFHPSSTSLESLFLHHHQQQLLHFPGN-SPDSSNNFSS-------------TSSFLHSD 97

Query: 80  S--AQETMKRKE---KQVSERNSGILCAAFGNDSSNARSSKASNMEGGRK-RRNCEKEQE 139
                ET KRK       S   SG+      +D++N  +++  ++  G++ ++  E+E E
Sbjct: 98  HNIVDETKKRKALLPTLSSSETSGV------SDNTNVIATETGSLRRGKRLKKKKEEEDE 157

Query: 140 KPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINY 199
           K  EVVHVRA+RGQATDSHSLAERVRR KIN +L+CLQ+++PGC+K+MGMA +LDE INY
Sbjct: 158 KEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINY 217

Query: 200 VYSLQNQVEFLSMELAAACSTLGIN 214
           V SLQNQVEFLSM+L AA S    N
Sbjct: 218 VQSLQNQVEFLSMKLTAASSFYDFN 222

[Close]
BLAST of CSPI03G20800 vs. Swiss-Prot
Match: BEE3_ARATH (Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.5e-30
Identity = 91/199 (45.73%), Postives = 121/199 (60.80%), Query Frame = 1 

Query: 27  SSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSAQETMKRK--- 86
           SS+++ + +H Q P++    SL N     +      FP   +++    S  +T KRK   
Sbjct: 39  SSLDSLF-FHNQFPDHFPGKSLENNFHQGIF-----FPSNIQNNEESSSQFDTKKRKSLM 98

Query: 87  ------EKQVSERN---SGILCAAFGNDSSNARSSKASNMEGGRKRRNCEKEQEKPGEVV 146
                 E  VS++    S    +  GN S+   SS+       R +R+  +E+EK  EVV
Sbjct: 99  EAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSR-------RGKRSKNREEEKEREVV 158

Query: 147 HVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQN 206
           HVRA+RGQATDSHS+AERVRR KIN +LKCLQ+I+PGC+K+MGMA +LDE INYV SLQN
Sbjct: 159 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 218

Query: 207 QVEFLSMELAAACSTLGIN 214
           QVEFLSM+L AA S    N
Sbjct: 219 QVEFLSMKLTAASSYYDFN 224

[Close]
BLAST of CSPI03G20800 vs. Swiss-Prot
Match: BH075_ARATH (Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.8e-29
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 1 

Query: 110 KASNMEGGRKRRNCEKEQE---------KPGEVVHVRAKRGQATDSHSLAERVRREKINH 169
           K +  E G KRR    E+E         KP +VVHVRAKRGQATDSHSLAERVRREKIN 
Sbjct: 69  KGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINE 128

Query: 170 KLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGIN 214
           +LKCLQ+++PGC+K+MGMA++LD  I+YV SLQNQ+EFLSM+L+AA +   +N
Sbjct: 129 RLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181

[Close]
BLAST of CSPI03G20800 vs. Swiss-Prot
Match: BH078_ARATH (Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.3e-24
Identity = 66/146 (45.21%), Postives = 90/146 (61.64%), Query Frame = 1 

Query: 81  KRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKRRNCEKEQEKPGE-------- 140
           K KE  +S  +     +     +     SK+S  +GG++RR  E ++E+ GE        
Sbjct: 229 KSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEEEGEGEGNKSNN 288

Query: 141 ---------VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLD 200
                     +HVRA+RGQATDSHSLAERVRREKI  ++K LQ+++PGC+K  G A++LD
Sbjct: 289 TKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLD 348

Query: 201 ETINYVYSLQNQVEFLSMELAAACST 210
           E INYV SLQ QVEFLSM+L++   T
Sbjct: 349 EIINYVQSLQRQVEFLSMKLSSVNDT 374

[Close]
BLAST of CSPI03G20800 vs. Swiss-Prot
Match: BH079_ARATH (Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.4e-23
Identity = 75/158 (47.47%), Postives = 97/158 (61.39%), Query Frame = 1 

Query: 69  SSLPVDSAQETMKRKEKQVSERNSGILCAA-FGN-DSSNARSSKASNMEGGRKRRNCEKE 128
           SS  V S+    + KE    +R    LC +  GN D S     + S+  GG K    + +
Sbjct: 87  SSKMVSSSSSGNELKESGDKKRK---LCGSESGNGDGSMRPEGETSSGGGGSKATEQKNK 146

Query: 129 QEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETI 188
            E P + +HVRA+RGQATD HSLAER RREKI+ K+  LQ+IIPGC+K +G A+VLDE I
Sbjct: 147 PEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEII 206

Query: 189 NYVYSLQNQVEFLSMEL------AAACSTLGINFGMGD 219
           NY+ SLQ QVEFLSM+L      A+   T+G+ F  GD
Sbjct: 207 NYIQSLQRQVEFLSMKLEVVNSGASTGPTIGV-FPSGD 240

[Close]
BLAST of CSPI03G20800 vs. TrEMBL
Match: A0A0A0LCH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G282490 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 5.2e-118
Identity = 225/230 (97.83%), Postives = 225/230 (97.83%), Query Frame = 1 

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           KEFPVITRSSLPVDS  ETMKRKEKQVSERNSGILCAAFGNDSSNARSSK  NMEGGRKR
Sbjct: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSK--NMEGGRKR 120

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RN EKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 121 RNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 231
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE
Sbjct: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 228

[Close]
BLAST of CSPI03G20800 vs. TrEMBL
Match: A0A061EIH6_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_019445 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.7e-39
Identity = 104/230 (45.22%), Postives = 141/230 (61.30%), Query Frame = 1 

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           M  +ME+  Q S    + LE+F+  + S+E    +  QLPE ++  +  N S+  L    
Sbjct: 4   MDISMEMTKQSSELNSTLLENFSIADFSLETLLAH--QLPEYSASCTHDNLSTTVLAGSL 63

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDS--SNARSSKASNMEGGR 120
              P     ++  D   E+ KRK  + S  N   +  A        N  + K + +  G+
Sbjct: 64  TAIPTARTVTVDEDVFIESKKRKAMEQSTSNYQSISPAVSTTEIGGNTSTRKRNRLGKGK 123

Query: 121 KRRNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGM 180
           K ++ EK+ EK  EV+HVRA+RGQATDSHSLAERVRREKIN K++CLQ+++PGCHK+MGM
Sbjct: 124 KGKSNEKQPEKAEEVIHVRARRGQATDSHSLAERVRREKINEKMRCLQDLVPGCHKTMGM 183

Query: 181 AMVLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSH 229
           A++LDE INYV+SLQNQVEFLSMELAAA S   +N      +KA GT SH
Sbjct: 184 AVMLDEIINYVHSLQNQVEFLSMELAAASSAYDLNLETECIKKAQGTNSH 231

[Close]
BLAST of CSPI03G20800 vs. TrEMBL
Match: U5GG63_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15590g PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 5.9e-37
Identity = 102/229 (44.54%), Postives = 141/229 (61.57%), Query Frame = 1 

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           M  NME++        S LE F+ T+ S ++      Q PE T+    +N SS       
Sbjct: 21  MDMNMEMLKHLPEMNPSILESFSITDFSADSLLAR--QQPEFTATYDHNNLSSTFHPDIL 80

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
               V+   +L  + + ++ KRK  + S  +           +S   + K +N+ G +K 
Sbjct: 81  STATVVHTVTLNQNDSHDSKKRKSMEQSTSSY------ISPTASTNETKKKNNLGGSKKG 140

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
            N EKE +K  EV+HVRAKRGQATDSHS+AERVRREKIN+KL+CLQ+++PGCH+SMGMA+
Sbjct: 141 ENKEKEGDKAEEVIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAV 200

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHE 230
           +L+E INYV+SLQNQVEFLSMELAAA S+  +N     +++A GT S E
Sbjct: 201 MLEEIINYVHSLQNQVEFLSMELAAASSSNDLNNLTESSKRAQGTDSTE 241

[Close]
BLAST of CSPI03G20800 vs. TrEMBL
Match: A0A067EV90_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017964mg PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 5.0e-36
Identity = 99/228 (43.42%), Postives = 135/228 (59.21%), Query Frame = 1 

Query: 4   NMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEF 63
           NME++  F+    S LE FN    S+     +  Q PE  +  S +N  S      +   
Sbjct: 23  NMEMVKHFAELKPSMLEYFNTPNFSLATPLAH--QQPEFLAGCSYNNSFSNFQTDSRIVV 82

Query: 64  PVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEG--GRKRR 123
           P +       D   E+ +R+  + S   S  +C++     +   + K   +    G+K  
Sbjct: 83  PRVRTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVS 142

Query: 124 NCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMV 183
           + EKE+  P  ++HVRAKRGQATDSHS+AERVRREKIN K++CLQ+++PGCHK MGMA +
Sbjct: 143 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 202

Query: 184 LDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHE 230
           L+E INYV+SLQNQVEFLSMELAAACS+  +N     +RK  GT SHE
Sbjct: 203 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHE 248

[Close]
BLAST of CSPI03G20800 vs. TrEMBL
Match: V4STF1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012453mg PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.6e-36
Identity = 99/228 (43.42%), Postives = 135/228 (59.21%), Query Frame = 1 

Query: 4   NMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEF 63
           NME++  F+    S LE FN    S+     +  Q PE  +  S +N  S      +   
Sbjct: 23  NMEMVKHFAELKPSMLEYFNTPNFSLATPLAH--QQPEFLAGCSYNNSFSNFQTDSRIVV 82

Query: 64  PVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEG--GRKRR 123
           P +       D   E+ +R+  + S   S  +C++     +   + K   +    G+K  
Sbjct: 83  PRVHTVRGNEDVLYESSRREVTEQSTSISKTMCSSASTSETQGDTYKNKKIRSRRGKKVS 142

Query: 124 NCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMV 183
           + EKE+  P  ++HVRAKRGQATDSHS+AERVRREKIN K++CLQ+++PGCHK MGMA +
Sbjct: 143 SNEKEEGNPERIIHVRAKRGQATDSHSIAERVRREKINKKMRCLQDLVPGCHKDMGMAGM 202

Query: 184 LDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHE 230
           L+E INYV+SLQNQVEFLSMELAAACS+  +N     +RK  GT SHE
Sbjct: 203 LEEIINYVHSLQNQVEFLSMELAAACSSNDLNIETESSRKTQGTNSHE 248

[Close]
BLAST of CSPI03G20800 vs. TAIR10
Match: AT1G18400.1 (AT1G18400.1 BR enhanced expression 1)

HSP 1 Score: 135.6 bits (340), Expect = 3.9e-32
Identity = 94/205 (45.85%), Postives = 127/205 (61.95%), Query Frame = 1 

Query: 20  EDFNETESSVENFWGYHFQ-----LPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVD 79
           + F+ + +S+E+ + +H Q      P N SP S +NFSS             T S L  D
Sbjct: 38  QTFHPSSTSLESLFLHHHQQQLLHFPGN-SPDSSNNFSS-------------TSSFLHSD 97

Query: 80  S--AQETMKRKE---KQVSERNSGILCAAFGNDSSNARSSKASNMEGGRK-RRNCEKEQE 139
                ET KRK       S   SG+      +D++N  +++  ++  G++ ++  E+E E
Sbjct: 98  HNIVDETKKRKALLPTLSSSETSGV------SDNTNVIATETGSLRRGKRLKKKKEEEDE 157

Query: 140 KPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINY 199
           K  EVVHVRA+RGQATDSHSLAERVRR KIN +L+CLQ+++PGC+K+MGMA +LDE INY
Sbjct: 158 KEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINY 217

Query: 200 VYSLQNQVEFLSMELAAACSTLGIN 214
           V SLQNQVEFLSM+L AA S    N
Sbjct: 218 VQSLQNQVEFLSMKLTAASSFYDFN 222

[Close]
BLAST of CSPI03G20800 vs. TAIR10
Match: AT1G73830.1 (AT1G73830.1 BR enhanced expression 3)

HSP 1 Score: 133.3 bits (334), Expect = 2.0e-31
Identity = 91/199 (45.73%), Postives = 121/199 (60.80%), Query Frame = 1 

Query: 27  SSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSAQETMKRK--- 86
           SS+++ + +H Q P++    SL N     +      FP   +++    S  +T KRK   
Sbjct: 39  SSLDSLF-FHNQFPDHFPGKSLENNFHQGIF-----FPSNIQNNEESSSQFDTKKRKSLM 98

Query: 87  ------EKQVSERN---SGILCAAFGNDSSNARSSKASNMEGGRKRRNCEKEQEKPGEVV 146
                 E  VS++    S    +  GN S+   SS+       R +R+  +E+EK  EVV
Sbjct: 99  EAVSTSENSVSDQTLSTSSAQVSINGNISTKNNSSR-------RGKRSKNREEEKEREVV 158

Query: 147 HVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQN 206
           HVRA+RGQATDSHS+AERVRR KIN +LKCLQ+I+PGC+K+MGMA +LDE INYV SLQN
Sbjct: 159 HVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQN 218

Query: 207 QVEFLSMELAAACSTLGIN 214
           QVEFLSM+L AA S    N
Sbjct: 219 QVEFLSMKLTAASSYYDFN 224

[Close]
BLAST of CSPI03G20800 vs. TAIR10
Match: AT1G25330.1 (AT1G25330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 129.8 bits (325), Expect = 2.2e-30
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 1 

Query: 110 KASNMEGGRKRRNCEKEQE---------KPGEVVHVRAKRGQATDSHSLAERVRREKINH 169
           K +  E G KRR    E+E         KP +VVHVRAKRGQATDSHSLAERVRREKIN 
Sbjct: 69  KGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINE 128

Query: 170 KLKCLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGIN 214
           +LKCLQ+++PGC+K+MGMA++LD  I+YV SLQNQ+EFLSM+L+AA +   +N
Sbjct: 129 RLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181

[Close]
BLAST of CSPI03G20800 vs. TAIR10
Match: AT5G48560.1 (AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 112.1 bits (279), Expect = 4.7e-25
Identity = 66/146 (45.21%), Postives = 90/146 (61.64%), Query Frame = 1 

Query: 81  KRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKRRNCEKEQEKPGE-------- 140
           K KE  +S  +     +     +     SK+S  +GG++RR  E ++E+ GE        
Sbjct: 229 KSKENPISTASPSPSFSKTAEKNGGKGGSKSSEEKGGKRRREEEDDEEEEGEGEGNKSNN 288

Query: 141 ---------VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLD 200
                     +HVRA+RGQATDSHSLAERVRREKI  ++K LQ+++PGC+K  G A++LD
Sbjct: 289 TKPPEPPKDYIHVRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLD 348

Query: 201 ETINYVYSLQNQVEFLSMELAAACST 210
           E INYV SLQ QVEFLSM+L++   T
Sbjct: 349 EIINYVQSLQRQVEFLSMKLSSVNDT 374

[Close]
BLAST of CSPI03G20800 vs. TAIR10
Match: AT5G62610.1 (AT5G62610.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-24
Identity = 75/158 (47.47%), Postives = 97/158 (61.39%), Query Frame = 1 

Query: 69  SSLPVDSAQETMKRKEKQVSERNSGILCAA-FGN-DSSNARSSKASNMEGGRKRRNCEKE 128
           SS  V S+    + KE    +R    LC +  GN D S     + S+  GG K    + +
Sbjct: 87  SSKMVSSSSSGNELKESGDKKRK---LCGSESGNGDGSMRPEGETSSGGGGSKATEQKNK 146

Query: 129 QEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDETI 188
            E P + +HVRA+RGQATD HSLAER RREKI+ K+  LQ+IIPGC+K +G A+VLDE I
Sbjct: 147 PEPPKDYIHVRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEII 206

Query: 189 NYVYSLQNQVEFLSMEL------AAACSTLGINFGMGD 219
           NY+ SLQ QVEFLSM+L      A+   T+G+ F  GD
Sbjct: 207 NYIQSLQRQVEFLSMKLEVVNSGASTGPTIGV-FPSGD 240

[Close]
BLAST of CSPI03G20800 vs. NCBI nr
Match: gi|778680713|ref|XP_011651380.1| (PREDICTED: transcription factor BEE 3-like isoform X4 [Cucumis sativus])

HSP 1 Score: 431.8 bits (1109), Expect = 7.5e-118
Identity = 225/230 (97.83%), Postives = 225/230 (97.83%), Query Frame = 1 

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           KEFPVITRSSLPVDS  ETMKRKEKQVSERNSGILCAAFGNDSSNARSSK  NMEGGRKR
Sbjct: 80  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSK--NMEGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RN EKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 231
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 247

[Close]
BLAST of CSPI03G20800 vs. NCBI nr
Match: gi|700202628|gb|KGN57761.1| (hypothetical protein Csa_3G282490 [Cucumis sativus])

HSP 1 Score: 431.8 bits (1109), Expect = 7.5e-118
Identity = 225/230 (97.83%), Postives = 225/230 (97.83%), Query Frame = 1 

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           KEFPVITRSSLPVDS  ETMKRKEKQVSERNSGILCAAFGNDSSNARSSK  NMEGGRKR
Sbjct: 61  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSK--NMEGGRKR 120

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RN EKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 121 RNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 231
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE
Sbjct: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKALGTRSHEE 228

[Close]
BLAST of CSPI03G20800 vs. NCBI nr
Match: gi|778680705|ref|XP_011651377.1| (PREDICTED: transcription factor BEE 3-like isoform X1 [Cucumis sativus])

HSP 1 Score: 416.8 bits (1070), Expect = 2.5e-113
Identity = 225/258 (87.21%), Postives = 225/258 (87.21%), Query Frame = 1 

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           KEFPVITRSSLPVDS  ETMKRKEKQVSERNSGILCAAFGNDSSNARSSK  NMEGGRKR
Sbjct: 80  KEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSK--NMEGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHK------ 180
           RN EKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHK      
Sbjct: 140 RNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKVNCFFH 199

Query: 181 ----------------------SMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGI 231
                                 SMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGI
Sbjct: 200 GPVQNIGVSTLMFKQNFQIILQSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGI 259

[Close]
BLAST of CSPI03G20800 vs. NCBI nr
Match: gi|659114293|ref|XP_008456996.1| (PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 398.7 bits (1023), Expect = 7.1e-108
Identity = 210/220 (95.45%), Postives = 212/220 (96.36%), Query Frame = 1 

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNA ES LEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           K+FPVITRSSL VDSAQETMKRKEKQVSE NSGILCAAFGNDSSNARSSK  N+ GGRKR
Sbjct: 80  KDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGNDSSNARSSK--NLGGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RNCEKEQEKPG VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNCEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 221
           VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNR 236

[Close]
BLAST of CSPI03G20800 vs. NCBI nr
Match: gi|659114295|ref|XP_008456998.1| (PREDICTED: transcription factor BEE 3-like isoform X3 [Cucumis melo])

HSP 1 Score: 379.4 bits (973), Expect = 4.4e-102
Identity = 201/211 (95.26%), Postives = 203/211 (96.21%), Query Frame = 1 

Query: 1   MTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 60
           MTFNMEVINQFSNA ES LEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ
Sbjct: 20  MTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQ 79

Query: 61  KEFPVITRSSLPVDSAQETMKRKEKQVSERNSGILCAAFGNDSSNARSSKASNMEGGRKR 120
           K+FPVITRSSL VDSAQETMKRKEKQVSE NSGILCAAFGNDSSNARSSK  N+ GGRKR
Sbjct: 80  KDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGNDSSNARSSK--NLGGGRKR 139

Query: 121 RNCEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 180
           RNCEKEQEKPG VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM
Sbjct: 140 RNCEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAM 199

Query: 181 VLDETINYVYSLQNQVEFLSMELAAACSTLG 212
           VLDETINYVYSLQNQVEFLSMELAAACSTLG
Sbjct: 200 VLDETINYVYSLQNQVEFLSMELAAACSTLG 227

The following BLAST results are available for this feature:
BLAST of CSPI03G20800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BEE1_ARATH7.0e-3145.85Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2 SV=1[more]
BEE3_ARATH3.5e-3045.73Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2 SV=1[more]
BH075_ARATH3.8e-2961.06Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2 SV=1[more]
BH078_ARATH8.3e-2445.21Transcription factor bHLH78 OS=Arabidopsis thaliana GN=BHLH78 PE=1 SV=1[more]
BH079_ARATH5.4e-2347.47Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2 SV=1[more]
BLAST of CSPI03G20800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCH4_CUCSA5.2e-11897.83Uncharacterized protein OS=Cucumis sativus GN=Csa_3G282490 PE=4 SV=1[more]
A0A061EIH6_THECC1.7e-3945.22Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma ca... [more]
U5GG63_POPTR5.9e-3744.54Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15590g PE=4 SV=1[more]
A0A067EV90_CITSI5.0e-3643.42Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017964mg PE=4 SV=1[more]
V4STF1_9ROSI6.6e-3643.42Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012453mg PE=4 SV=1[more]
BLAST of CSPI03G20800 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G18400.13.9e-3245.85 BR enhanced expression 1[more]
AT1G73830.12.0e-3145.73 BR enhanced expression 3[more]
AT1G25330.12.2e-3061.06 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G48560.14.7e-2545.21 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G62610.13.0e-2447.47 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of CSPI03G20800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680713|ref|XP_011651380.1|7.5e-11897.83PREDICTED: transcription factor BEE 3-like isoform X4 [Cucumis sativus][more]
gi|700202628|gb|KGN57761.1|7.5e-11897.83hypothetical protein Csa_3G282490 [Cucumis sativus][more]
gi|778680705|ref|XP_011651377.1|2.5e-11387.21PREDICTED: transcription factor BEE 3-like isoform X1 [Cucumis sativus][more]
gi|659114293|ref|XP_008456996.1|7.1e-10895.45PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis melo][more]
gi|659114295|ref|XP_008456998.1|4.4e-10295.26PREDICTED: transcription factor BEE 3-like isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0044699 single-organism process
biological_process GO:0008150 biological_process
biological_process GO:0006000 fructose metabolic process
biological_process GO:0009298 GDP-mannose biosynthetic process
biological_process GO:0006013 mannose metabolic process
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0004476 mannose-6-phosphate isomerase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G20800.1CSPI03G20800.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 142..204
score: 9.6
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 146..193
score: 3.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 148..198
score: 5.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 142..192
score: 14
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 140..205
score: 7.85
NoneNo IPR availablePANTHERPTHR12565STEROL REGULATORY ELEMENT-BINDING PROTEINcoord: 8..18
score: 6.4E-58coord: 73..206
score: 6.4
NoneNo IPR availablePANTHERPTHR12565:SF128TRANSCRIPTION FACTOR BHLH75coord: 8..18
score: 6.4E-58coord: 73..206
score: 6.4