CmaCh14G008170 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh14G008170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Transcription factor, putative
Location	Cma_Chr14 : 4127961 .. 4130016 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGAGTTTAGGCAAGACCTGCATCAAGAAAGGGGCTTGAATATAGAAGTCCTGACCCAGTTCTCTAATATGACAGAGAGCATGTTAGAGGGTGGCTTGGAGAACTTATTGGGCTACCATTTCCAGATACCAAAAAGCACAACACCCAGTTCACTATCCAATTTTCCTTGTGTTACTTTACTGAAATGTCAGAACGAGTTTCCGATAACTCGAACCGGTCTACTGGTAGATAACGCTCAAGAAACCATGATGAGAAAAGCCAAACAAGAATCGGAAAGCAACTCAGGAGCACTTTGTGCAGCCAGGCCTTTGAAAGCAAGTGTCAATTCTTCAGCAAATTCTTTCAGTTGTTTTGAACTTTTAGTTTTCTCATTTCTTTGTTTACTCAGAACTTGGGAGGAGGAAGGAAAAGAAGGAACTGTGAGAAAGAACAGGAAAAGCCTGCAGAAGTAGTTCATGTTAGAGCAAAACGTGGTCAAGCTACAGATAGTCACAGTTTAGCAGAAAGGGTAATTGCTGAATTATAAAATGTTTCTTCCAAAACACAATTTTTTTTAGAGATTGATTTCTTGTTCTTCATATTTCAGGTGAGAAGAGAGAAAATCAACAACAAATTAAAATGCTTGCAAAACCTTATTCCAGGATGTCACAAGGTAATTCTTTTTTCTTGTCCTGTTTACCAAAACGTTGGAACCTCAATTTCAAACAAAATCTCCATATTATTTTGCAGTCAATGGGTATGGCAATGGTGTTGGATGAGACAATCAATTATGTTCATTCACTACAGAATCAGGTTGAGGTGAGGAACATGGTGAACTTTTCGTAAGTATTAATAATGTTTTACTCTAATAGCATTGAAATATTTACTTTGTCCTTGAATTCAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCTCTTTAGGCATAAATTTTGGCACGGGAGCTATCAGAAAAGCTTAGGTACTCCCACAATTTCCCAAAAGTTTATTAACTTTTGACATTTTACTTTCTAATAATGAAACGTTGGGTAAATCAGTGCCTACTTTAACTGATTTTGTTTAGGAATCTTCTTCTGGAATGGTGGGAGGAAGATGCTTTTTTCTTTTTTCATTTTGAAAAGTAAGCTACTTCCTTTATGACAAAGAAGTACGACTAGGAGAATGAAAGAAACTTATAGACACTCATTTATTTCAGTTCACACAAGTTCTTCACTCACCTCACCTTTTTGTCTTCATGTCTGCTTCTCCTTGCTCAAGAGATTTTTCAAGCCCACGGCTAGCAGATATTGTCCAATTTGAACTTTCTCTTTTGGGCTTCCTCTCAAGGTTTTTAAAACACGTCTACTAGAGAAAGATTTCCACATTCTTATATAGAATGTTTCGTTCTCCCCCTCAATCGATGAGGGATCTCACAACCTACCTCTAGATAATTTCTTTCAAGAGTTCGAGAATTAAATGAGAATCTGCCATTCCGACTGAAGAAGAAAAGAAACAAGGCAGGAAAGCGGAGGGGAGGGATGCCAAGTGCAGTGATATTGATAGATCAACAGAAAAACGGTGTTGATTGGCCAGGGGAACAAGGTTAGGAGTGGGATGGGTTCAAAAAGAAGAAGGATAAAAAATAGTTTTTGTCCAGACTTAACAAAAATATCTAAGAATATGGTGGATCAATTGAGCCATTTTGATTGGTCAAAGCTAAAATCCCAGGCAGTAAAACCATATATTAATGTTGAAGTACTGATGTTTAAGCTTTAAGCATAACCCTGCAGGGAACAAGATCACATGAGGAACAGGCGACAGAGAAATAGATGAGGAACTGATAAAGAGAACACAGTTGCTTCCACTTCAGTAAGCCCTTTTGACTGCAAATGGGGCATTTGATATCTCTAGGCAAACAAGATAGTGTTTTCTCACAAGTCTACAAAATGTCGAAAACAAATCTATCAGAGAGTGATGTATCAATTTTACATCCTACTGTAAATTGCATAAAGCAGAACAGTGCAACCAATTACCTAATATTGGCTATGTCTGATGGGATTTTGTTATCCTGTC

mRNA sequence

ATGTCAGAGTTTAGGCAAGACCTGCATCAAGAAAGGGGCTTGAATATAGAAGTCCTGACCCAGTTCTCTAATATGACAGAGAGCATGTTAGAGGGTGGCTTGGAGAACTTATTGGGCTACCATTTCCAGATACCAAAAAGCACAACACCCAGTTCACTATCCAATTTTCCTTGTGTTACTTTACTGAAATGTCAGAACGAGTTTCCGATAACTCGAACCGGTCTACTGGTAGATAACGCTCAAGAAACCATGATGAGAAAAGCCAAACAAGAATCGGAAAGCAACTCAGGAGCACTTTGTGCAGCCAGGCCTTTGAAAAACTTGGGAGGAGGAAGGAAAAGAAGGAACTGTGAGAAAGAACAGGAAAAGCCTGCAGAAGTAGTTCATGTTAGAGCAAAACGTGGTCAAGCTACAGATAGTCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAAAATCAACAACAAATTAAAATGCTTGCAAAACCTTATTCCAGGATGTCACAAGTCAATGGGTATGGCAATGGTGTTGGATGAGACAATCAATTATGTTCATTCACTACAGAATCAGGTTGAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCTCTTTAGGCATAAATTTTGGCACGGGAGCTATCAGAAAAGCTTAGGGAACAAGATCACATGAGGAACAGGCGACAGAGAAATAGATGAGGAACTGATAAAGAGAACACAGTTGCTTCCACTTCAGTAAGCCCTTTTGACTGCAAATGGGGCATTTGATATCTCTAGGCAAACAAGATAGTGTTTTCTCACAAGTCTACAAAATGTCGAAAACAAATCTATCAGAGAGTGATGTATCAATTTTACATCCTACTGTAAATTGCATAAAGCAGAACAGTGCAACCAATTACCTAATATTGGCTATGTCTGATGGGATTTTGTTATCCTGTC

Coding sequence (CDS)

ATGTCAGAGTTTAGGCAAGACCTGCATCAAGAAAGGGGCTTGAATATAGAAGTCCTGACCCAGTTCTCTAATATGACAGAGAGCATGTTAGAGGGTGGCTTGGAGAACTTATTGGGCTACCATTTCCAGATACCAAAAAGCACAACACCCAGTTCACTATCCAATTTTCCTTGTGTTACTTTACTGAAATGTCAGAACGAGTTTCCGATAACTCGAACCGGTCTACTGGTAGATAACGCTCAAGAAACCATGATGAGAAAAGCCAAACAAGAATCGGAAAGCAACTCAGGAGCACTTTGTGCAGCCAGGCCTTTGAAAAACTTGGGAGGAGGAAGGAAAAGAAGGAACTGTGAGAAAGAACAGGAAAAGCCTGCAGAAGTAGTTCATGTTAGAGCAAAACGTGGTCAAGCTACAGATAGTCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAAAATCAACAACAAATTAAAATGCTTGCAAAACCTTATTCCAGGATGTCACAAGTCAATGGGTATGGCAATGGTGTTGGATGAGACAATCAATTATGTTCATTCACTACAGAATCAGGTTGAGTTTCTCTCAATGGAGCTTGCAGCTGCATGTTCCTCTTTAGGCATAAATTTTGGCACGGGAGCTATCAGAAAAGCTTAG

Protein sequence

MSEFRQDLHQERGLNIEVLTQFSNMTESMLEGGLENLLGYHFQIPKSTTPSSLSNFPCVTLLKCQNEFPITRTGLLVDNAQETMMRKAKQESESNSGALCAARPLKNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLGINFGTGAIRKA

Homology

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BLAST of CmaCh14G008170 vs. Swiss-Prot
Match: BEE3_ARATH (Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 8.6e-31
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 1


Query: 106 KNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPG 165
           KN    R +R+  +E+EK  EVVHVRA+RGQATDSHS+AERVRR KIN +LKCLQ+++PG
Sbjct: 123 KNNSSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPG 182

Query: 166 CHKSMGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLGINFGTGAI 214
           C+K+MGMA +LDE INYV SLQNQVEFLSM+L AA S    N  T A+
Sbjct: 183 CYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAV 230

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BLAST of CmaCh14G008170 vs. Swiss-Prot
Match: BEE1_ARATH (Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.5e-30
Identity = 69/104 (66.35%), Postives = 83/104 (79.81%), Query Frame = 1


Query: 110 GGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPGCHKS 169
           G R ++  E+E EK  EVVHVRA+RGQATDSHSLAERVRR KIN +L+CLQ+++PGC+K+
Sbjct: 125 GKRLKKKKEEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKA 184

Query: 170 MGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLGINFGTGAI 214
           MGMA +LDE INYV SLQNQVEFLSM+L AA S    N  T A+
Sbjct: 185 MGMATMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFNSETDAV 228

[Close]

BLAST of CmaCh14G008170 vs. Swiss-Prot
Match: BH075_ARATH (Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-29
Identity = 67/106 (63.21%), Postives = 86/106 (81.13%), Query Frame = 1


Query: 109 GGGRKRRNCEKEQ-------EKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQN 168
           G  R+R+  E+E+       +KP +VVHVRAKRGQATDSHSLAERVRREKIN +LKCLQ+
Sbjct: 76  GSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQD 135

Query: 169 LIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLGIN 208
           L+PGC+K+MGMA++LD  I+YV SLQNQ+EFLSM+L+AA +   +N
Sbjct: 136 LVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181

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BLAST of CmaCh14G008170 vs. Swiss-Prot
Match: BH137_ARATH (Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.7e-24
Identity = 64/134 (47.76%), Postives = 88/134 (65.67%), Query Frame = 1


Query: 77  VDNAQETMMRKAKQESESNSGALCAARPLKNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQ 136
           + N  +T  RKA+  + S  G           G   K++    ++E P + +HVRA+RGQ
Sbjct: 92  ITNTGKTRGRKARNSNNSKEGVE---------GRKSKKQKRGSKEEPPTDYIHVRARRGQ 151

Query: 137 ATDSHSLAERVRREKINNKLKCLQNLIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSME 196
           ATDSHSLAERVRREKI+ +++ LQNL+PGC K  G A++LDE INYV +LQ QVEFLSM+
Sbjct: 152 ATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMK 211

Query: 197 LAAACSSLGINFGT 211
           L  + S +  +FG+
Sbjct: 212 L-TSISPVVYDFGS 215

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BLAST of CmaCh14G008170 vs. Swiss-Prot
Match: BH079_ARATH (Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.9e-24
Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 1


Query: 91  ESESNSGALCAARPLKNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRRE 150
           ES +  G++       + GGG K    + + E P + +HVRA+RGQATD HSLAER RRE
Sbjct: 114 ESGNGDGSMRPEGETSSGGGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARRE 173

Query: 151 KINNKLKCLQNLIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSMEL 198
           KI+ K+  LQ++IPGC+K +G A+VLDE INY+ SLQ QVEFLSM+L
Sbjct: 174 KISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKL 220

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BLAST of CmaCh14G008170 vs. TrEMBL
Match: A0A0A0LCH4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G282490 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 6.1e-76
Identity = 159/217 (73.27%), Postives = 173/217 (79.72%), Query Frame = 1


Query: 15  NIEVLTQFSNMTESMLE------GGLENLLGYHFQIPKSTTPSSLSNFPCVTLLKCQNEF 74
           N+EV+ QFSN  ES LE        +EN  GYHFQ+P++T+PSSLSNF  V LLKCQ EF
Sbjct: 4   NMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEF 63

Query: 75  P-ITRTGLLVDNAQETMMRKAKQESESNSGALCAA--------RPLKNLGGGRKRRNCEK 134
           P ITR+ L VD+  ETM RK KQ SE NSG LCAA        R  KN+ GGRKRRN EK
Sbjct: 64  PVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRNYEK 123

Query: 135 EQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPGCHKSMGMAMVLDET 194
           EQEKP EVVHVRAKRGQATDSHSLAERVRREKIN+KLKCLQN+IPGCHKSMGMAMVLDET
Sbjct: 124 EQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDET 183

Query: 195 INYVHSLQNQVEFLSMELAAACSSLGINFGTGAIRKA 217
           INYV+SLQNQVEFLSMELAAACS+LGINFG G  RKA
Sbjct: 184 INYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKA 220

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BLAST of CmaCh14G008170 vs. TrEMBL
Match: A0A061EIH6_THECC (Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma cacao GN=TCM_019445 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 7.0e-40
Identity = 104/225 (46.22%), Postives = 140/225 (62.22%), Query Frame = 1


Query: 11  ERGLNIEVLTQFSNMTESMLEG------GLENLLGYHFQIPKSTTPSSLSNFPCVTLLKC 70
           E  +++E+  Q S +  ++LE        LE LL +  Q+P+ +   +  N     L   
Sbjct: 3   EMDISMEMTKQSSELNSTLLENFSIADFSLETLLAH--QLPEYSASCTHDNLSTTVLAGS 62

Query: 71  QNEFPITRTGLLVDNAQ-ETMMRKAKQESESNSGALCAA------------RPLKNLGGG 130
               P  RT  + ++   E+  RKA ++S SN  ++  A            R    LG G
Sbjct: 63  LTAIPTARTVTVDEDVFIESKKRKAMEQSTSNYQSISPAVSTTEIGGNTSTRKRNRLGKG 122

Query: 131 RKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPGCHKSMG 190
           +K ++ EK+ EK  EV+HVRA+RGQATDSHSLAERVRREKIN K++CLQ+L+PGCHK+MG
Sbjct: 123 KKGKSNEKQPEKAEEVIHVRARRGQATDSHSLAERVRREKINEKMRCLQDLVPGCHKTMG 182

Query: 191 MAMVLDETINYVHSLQNQVEFLSMELAAACSSLGINFGTGAIRKA 217
           MA++LDE INYVHSLQNQVEFLSMELAAA S+  +N  T  I+KA
Sbjct: 183 MAVMLDEIINYVHSLQNQVEFLSMELAAASSAYDLNLETECIKKA 225

[Close]

BLAST of CmaCh14G008170 vs. TrEMBL
Match: U5GG63_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15590g PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.3e-37
Identity = 102/222 (45.95%), Postives = 138/222 (62.16%), Query Frame = 1


Query: 6   QDLHQERGLNIEVLTQFSNMTESMLEG------GLENLLGYHFQIPKSTTPSSLSNFPCV 65
           Q L +   +N+E+L     M  S+LE         ++LL    Q P+ T     +N    
Sbjct: 15  QPLTEMMDMNMEMLKHLPEMNPSILESFSITDFSADSLLAR--QQPEFTATYDHNNLSST 74

Query: 66  TLLKCQNEFPITRTGLLVDN-AQETMMRKAKQESESN----SGALCAARPLKNLGGGRKR 125
                 +   +  T  L  N + ++  RK+ ++S S+    + +    +   NLGG +K 
Sbjct: 75  FHPDILSTATVVHTVTLNQNDSHDSKKRKSMEQSTSSYISPTASTNETKKKNNLGGSKKG 134

Query: 126 RNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPGCHKSMGMAM 185
            N EKE +K  EV+HVRAKRGQATDSHS+AERVRREKINNKL+CLQ+L+PGCH+SMGMA+
Sbjct: 135 ENKEKEGDKAEEVIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHRSMGMAV 194

Query: 186 VLDETINYVHSLQNQVEFLSMELAAACSSLGINFGTGAIRKA 217
           +L+E INYVHSLQNQVEFLSMELAAA SS  +N  T + ++A
Sbjct: 195 MLEEIINYVHSLQNQVEFLSMELAAASSSNDLNNLTESSKRA 234

[Close]

BLAST of CmaCh14G008170 vs. TrEMBL
Match: B9T6S5_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_0016380 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 2.1e-36
Identity = 93/160 (58.13%), Postives = 114/160 (71.25%), Query Frame = 1


Query: 69  PITRTGLLVDNAQETMMR---KAKQESESNSGALCAA---------RPLKNLGGGRKRRN 128
           PI  T   VD++Q  + R   K K E++S S +   +         +   NLG  +K +N
Sbjct: 79  PIVHT---VDSSQYVIFRDSKKRKVEAQSTSSSKNVSPTTSTTTNTKQKNNLGRDKKGKN 138

Query: 129 CEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPGCHKSMGMAMVL 188
            EKE EK  EV+HVRAKRGQATDSHS+AERVRREKINNKL+CLQ+L+PGCHKSMGMA++L
Sbjct: 139 KEKEVEKAEEVIHVRAKRGQATDSHSIAERVRREKINNKLRCLQDLVPGCHKSMGMAVML 198

Query: 189 DETINYVHSLQNQVEFLSMELAAACSSLGINFGTGAIRKA 217
           +E INYVHSLQNQVEFLSMELAAA  S  +N  T + +KA
Sbjct: 199 EEIINYVHSLQNQVEFLSMELAAASCSYDLNLETESSKKA 235

[Close]

BLAST of CmaCh14G008170 vs. TrEMBL
Match: A0A067F6A3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017964mg PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.7e-36
Identity = 102/249 (40.96%), Postives = 140/249 (56.22%), Query Frame = 1


Query: 1   MSEFRQDLHQ--------ERGLNIEVLTQFSNMTESMLEGGLENLLGYHFQIPKSTTPSS 60
           M++FR++           E G+N+E++  F+ +  SMLE         +F  P  +  + 
Sbjct: 1   MADFRENTQSLRASQAFTELGVNMEMVKHFAELKPSMLE---------YFNTPNFSLATP 60

Query: 61  LSNFPCVTLLKCQ--NEFPITRTGLLV------------DNAQETMMRKAKQESESNSGA 120
           L++     L  C   N F   +T   +            D   E+  R+  ++S S S  
Sbjct: 61  LAHQQPEFLAGCSYNNSFSNFQTDSRIVVPRVRTVRGNEDVLYESSRREVTEQSTSISKT 120

Query: 121 LCAARPLKNLGG------------GRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAER 180
           +C++       G            G+K  + EKE+  P  ++HVRAKRGQATDSHS+AER
Sbjct: 121 MCSSASTSETQGDTYKNKKIRSRRGKKVSSNEKEEGNPERIIHVRAKRGQATDSHSIAER 180

Query: 181 VRREKINNKLKCLQNLIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLGI 216
           VRREKIN K++CLQ+L+PGCHK MGMA +L+E INYVHSLQNQVEFLSMELAAACSS  +
Sbjct: 181 VRREKINKKMRCLQDLVPGCHKDMGMAGMLEEIINYVHSLQNQVEFLSMELAAACSSNDL 240

[Close]

BLAST of CmaCh14G008170 vs. TAIR10
Match: AT1G73830.1 (AT1G73830.1 BR enhanced expression 3)

HSP 1 Score: 135.2 bits (339), Expect = 4.8e-32
Identity = 70/108 (64.81%), Postives = 85/108 (78.70%), Query Frame = 1


Query: 106 KNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPG 165
           KN    R +R+  +E+EK  EVVHVRA+RGQATDSHS+AERVRR KIN +LKCLQ+++PG
Sbjct: 123 KNNSSRRGKRSKNREEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPG 182

Query: 166 CHKSMGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLGINFGTGAI 214
           C+K+MGMA +LDE INYV SLQNQVEFLSM+L AA S    N  T A+
Sbjct: 183 CYKTMGMATMLDEIINYVQSLQNQVEFLSMKLTAASSYYDFNSETDAV 230

[Close]

BLAST of CmaCh14G008170 vs. TAIR10
Match: AT1G18400.1 (AT1G18400.1 BR enhanced expression 1)

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 69/104 (66.35%), Postives = 83/104 (79.81%), Query Frame = 1


Query: 110 GGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPGCHKS 169
           G R ++  E+E EK  EVVHVRA+RGQATDSHSLAERVRR KIN +L+CLQ+++PGC+K+
Sbjct: 125 GKRLKKKKEEEDEKEREVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKA 184

Query: 170 MGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLGINFGTGAI 214
           MGMA +LDE INYV SLQNQVEFLSM+L AA S    N  T A+
Sbjct: 185 MGMATMLDEIINYVQSLQNQVEFLSMKLTAASSFYDFNSETDAV 228

[Close]

BLAST of CmaCh14G008170 vs. TAIR10
Match: AT1G25330.1 (AT1G25330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 131.3 bits (329), Expect = 7.0e-31
Identity = 67/106 (63.21%), Postives = 86/106 (81.13%), Query Frame = 1


Query: 109 GGGRKRRNCEKEQ-------EKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQN 168
           G  R+R+  E+E+       +KP +VVHVRAKRGQATDSHSLAERVRREKIN +LKCLQ+
Sbjct: 76  GSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRREKINERLKCLQD 135

Query: 169 LIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLGIN 208
           L+PGC+K+MGMA++LD  I+YV SLQNQ+EFLSM+L+AA +   +N
Sbjct: 136 LVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLN 181

[Close]

BLAST of CmaCh14G008170 vs. TAIR10
Match: AT5G50915.1 (AT5G50915.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-25
Identity = 64/134 (47.76%), Postives = 88/134 (65.67%), Query Frame = 1


Query: 77  VDNAQETMMRKAKQESESNSGALCAARPLKNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQ 136
           + N  +T  RKA+  + S  G           G   K++    ++E P + +HVRA+RGQ
Sbjct: 92  ITNTGKTRGRKARNSNNSKEGVE---------GRKSKKQKRGSKEEPPTDYIHVRARRGQ 151

Query: 137 ATDSHSLAERVRREKINNKLKCLQNLIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSME 196
           ATDSHSLAERVRREKI+ +++ LQNL+PGC K  G A++LDE INYV +LQ QVEFLSM+
Sbjct: 152 ATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMK 211

Query: 197 LAAACSSLGINFGT 211
           L  + S +  +FG+
Sbjct: 212 L-TSISPVVYDFGS 215

[Close]

BLAST of CmaCh14G008170 vs. TAIR10
Match: AT5G62610.1 (AT5G62610.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 112.5 bits (280), Expect = 3.3e-25
Identity = 58/107 (54.21%), Postives = 76/107 (71.03%), Query Frame = 1


Query: 91  ESESNSGALCAARPLKNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRRE 150
           ES +  G++       + GGG K    + + E P + +HVRA+RGQATD HSLAER RRE
Sbjct: 114 ESGNGDGSMRPEGETSSGGGGSKATEQKNKPEPPKDYIHVRARRGQATDRHSLAERARRE 173

Query: 151 KINNKLKCLQNLIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSMEL 198
           KI+ K+  LQ++IPGC+K +G A+VLDE INY+ SLQ QVEFLSM+L
Sbjct: 174 KISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLSMKL 220

[Close]

BLAST of CmaCh14G008170 vs. NCBI nr
Match: gi|659114293|ref|XP_008456996.1| (PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 305.8 bits (782), Expect = 5.9e-80
Identity = 169/234 (72.22%), Postives = 186/234 (79.49%), Query Frame = 1


Query: 1   MSEFRQDLH--------QERGLNIEVLTQFSNMTESMLE------GGLENLLGYHFQIPK 60
           M EFRQ+L         +E   N+EV+ QFSN TES+LE        +EN  GYHFQ+P+
Sbjct: 1   MREFRQNLQHFKSSKASEEMTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPE 60

Query: 61  STTPSSLSNFPCVTLLKCQNEFP-ITRTGLLVDNAQETMMRKAKQESESNSGALCAA--- 120
           +T+PSSLSNF  V LLKCQ +FP ITR+ LLVD+AQETM RK KQ SESNSG LCAA   
Sbjct: 61  NTSPSSLSNFSSVALLKCQKDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGN 120

Query: 121 -----RPLKNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLK 180
                R  KNLGGGRKRRNCEKEQEKP  VVHVRAKRGQATDSHSLAERVRREKIN+KLK
Sbjct: 121 DSSNARSSKNLGGGRKRRNCEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLK 180

Query: 181 CLQNLIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLGINFGTG 212
           CLQN+IPGCHKSMGMAMVLDETINYV+SLQNQVEFLSMELAAACS+LGINFG G
Sbjct: 181 CLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMG 233

[Close]

BLAST of CmaCh14G008170 vs. NCBI nr
Match: gi|778680713|ref|XP_011651380.1| (PREDICTED: transcription factor BEE 3-like isoform X4 [Cucumis sativus])

HSP 1 Score: 298.1 bits (762), Expect = 1.2e-77
Identity = 166/239 (69.46%), Postives = 183/239 (76.57%), Query Frame = 1


Query: 1   MSEFRQDLH--------QERGLNIEVLTQFSNMTESMLE------GGLENLLGYHFQIPK 60
           M+EFRQ+L         +E   N+EV+ QFSN  ES LE        +EN  GYHFQ+P+
Sbjct: 1   MTEFRQNLQHFKSSKASEEMTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPE 60

Query: 61  STTPSSLSNFPCVTLLKCQNEFP-ITRTGLLVDNAQETMMRKAKQESESNSGALCAA--- 120
           +T+PSSLSNF  V LLKCQ EFP ITR+ L VD+  ETM RK KQ SE NSG LCAA   
Sbjct: 61  NTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGN 120

Query: 121 -----RPLKNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLK 180
                R  KN+ GGRKRRN EKEQEKP EVVHVRAKRGQATDSHSLAERVRREKIN+KLK
Sbjct: 121 DSSNARSSKNMEGGRKRRNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLK 180

Query: 181 CLQNLIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLGINFGTGAIRKA 217
           CLQN+IPGCHKSMGMAMVLDETINYV+SLQNQVEFLSMELAAACS+LGINFG G  RKA
Sbjct: 181 CLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKA 239

[Close]

BLAST of CmaCh14G008170 vs. NCBI nr
Match: gi|659114295|ref|XP_008456998.1| (PREDICTED: transcription factor BEE 3-like isoform X3 [Cucumis melo])

HSP 1 Score: 295.4 bits (755), Expect = 7.9e-77
Identity = 164/228 (71.93%), Postives = 181/228 (79.39%), Query Frame = 1


Query: 1   MSEFRQDLH--------QERGLNIEVLTQFSNMTESMLE------GGLENLLGYHFQIPK 60
           M EFRQ+L         +E   N+EV+ QFSN TES+LE        +EN  GYHFQ+P+
Sbjct: 1   MREFRQNLQHFKSSKASEEMTFNMEVINQFSNATESVLEDFNETESSVENFWGYHFQLPE 60

Query: 61  STTPSSLSNFPCVTLLKCQNEFP-ITRTGLLVDNAQETMMRKAKQESESNSGALCAA--- 120
           +T+PSSLSNF  V LLKCQ +FP ITR+ LLVD+AQETM RK KQ SESNSG LCAA   
Sbjct: 61  NTSPSSLSNFSSVALLKCQKDFPVITRSSLLVDSAQETMKRKEKQVSESNSGILCAAFGN 120

Query: 121 -----RPLKNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLK 180
                R  KNLGGGRKRRNCEKEQEKP  VVHVRAKRGQATDSHSLAERVRREKIN+KLK
Sbjct: 121 DSSNARSSKNLGGGRKRRNCEKEQEKPG-VVHVRAKRGQATDSHSLAERVRREKINHKLK 180

Query: 181 CLQNLIPGCHKSMGMAMVLDETINYVHSLQNQVEFLSMELAAACSSLG 206
           CLQN+IPGCHKSMGMAMVLDETINYV+SLQNQVEFLSMELAAACS+LG
Sbjct: 181 CLQNIIPGCHKSMGMAMVLDETINYVYSLQNQVEFLSMELAAACSTLG 227

[Close]

BLAST of CmaCh14G008170 vs. NCBI nr
Match: gi|700202628|gb|KGN57761.1| (hypothetical protein Csa_3G282490 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 8.7e-76
Identity = 159/217 (73.27%), Postives = 173/217 (79.72%), Query Frame = 1


Query: 15  NIEVLTQFSNMTESMLE------GGLENLLGYHFQIPKSTTPSSLSNFPCVTLLKCQNEF 74
           N+EV+ QFSN  ES LE        +EN  GYHFQ+P++T+PSSLSNF  V LLKCQ EF
Sbjct: 4   NMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPENTSPSSLSNFSSVALLKCQKEF 63

Query: 75  P-ITRTGLLVDNAQETMMRKAKQESESNSGALCAA--------RPLKNLGGGRKRRNCEK 134
           P ITR+ L VD+  ETM RK KQ SE NSG LCAA        R  KN+ GGRKRRN EK
Sbjct: 64  PVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGNDSSNARSSKNMEGGRKRRNYEK 123

Query: 135 EQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLKCLQNLIPGCHKSMGMAMVLDET 194
           EQEKP EVVHVRAKRGQATDSHSLAERVRREKIN+KLKCLQN+IPGCHKSMGMAMVLDET
Sbjct: 124 EQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLKCLQNIIPGCHKSMGMAMVLDET 183

Query: 195 INYVHSLQNQVEFLSMELAAACSSLGINFGTGAIRKA 217
           INYV+SLQNQVEFLSMELAAACS+LGINFG G  RKA
Sbjct: 184 INYVYSLQNQVEFLSMELAAACSTLGINFGMGDNRKA 220

[Close]

BLAST of CmaCh14G008170 vs. NCBI nr
Match: gi|778680705|ref|XP_011651377.1| (PREDICTED: transcription factor BEE 3-like isoform X1 [Cucumis sativus])

HSP 1 Score: 283.1 bits (723), Expect = 4.1e-73
Identity = 166/267 (62.17%), Postives = 183/267 (68.54%), Query Frame = 1


Query: 1   MSEFRQDLH--------QERGLNIEVLTQFSNMTESMLE------GGLENLLGYHFQIPK 60
           M+EFRQ+L         +E   N+EV+ QFSN  ES LE        +EN  GYHFQ+P+
Sbjct: 1   MTEFRQNLQHFKSSKASEEMTFNMEVINQFSNAMESALEDFNETESSVENFWGYHFQLPE 60

Query: 61  STTPSSLSNFPCVTLLKCQNEFP-ITRTGLLVDNAQETMMRKAKQESESNSGALCAA--- 120
           +T+PSSLSNF  V LLKCQ EFP ITR+ L VD+  ETM RK KQ SE NSG LCAA   
Sbjct: 61  NTSPSSLSNFSSVALLKCQKEFPVITRSSLPVDSGHETMKRKEKQVSERNSGILCAAFGN 120

Query: 121 -----RPLKNLGGGRKRRNCEKEQEKPAEVVHVRAKRGQATDSHSLAERVRREKINNKLK 180
                R  KN+ GGRKRRN EKEQEKP EVVHVRAKRGQATDSHSLAERVRREKIN+KLK
Sbjct: 121 DSSNARSSKNMEGGRKRRNYEKEQEKPGEVVHVRAKRGQATDSHSLAERVRREKINHKLK 180

Query: 181 CLQNLIPGCHK----------------------------SMGMAMVLDETINYVHSLQNQ 217
           CLQN+IPGCHK                            SMGMAMVLDETINYV+SLQNQ
Sbjct: 181 CLQNIIPGCHKVNCFFHGPVQNIGVSTLMFKQNFQIILQSMGMAMVLDETINYVYSLQNQ 240

The following BLAST results are available for this feature:

BLAST of CmaCh14G008170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BEE3_ARATH	8.6e-31	64.81	Transcription factor BEE 3 OS=Arabidopsis thaliana GN=BEE3 PE=2 SV=1	[more]
BEE1_ARATH	2.5e-30	66.35	Transcription factor BEE 1 OS=Arabidopsis thaliana GN=BEE1 PE=2 SV=1	[more]
BH075_ARATH	1.2e-29	63.21	Transcription factor bHLH75 OS=Arabidopsis thaliana GN=BHLH75 PE=2 SV=1	[more]
BH137_ARATH	2.7e-24	47.76	Transcription factor bHLH137 OS=Arabidopsis thaliana GN=BHLH137 PE=2 SV=1	[more]
BH079_ARATH	5.9e-24	54.21	Transcription factor bHLH79 OS=Arabidopsis thaliana GN=BHLH79 PE=2 SV=1	[more]

BLAST of CmaCh14G008170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCH4_CUCSA	6.1e-76	73.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G282490 PE=4 SV=1	[more]
A0A061EIH6_THECC	7.0e-40	46.22	Basic helix-loop-helix DNA-binding superfamily protein, putative OS=Theobroma ca...	[more]
U5GG63_POPTR	4.3e-37	45.95	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s15590g PE=4 SV=1	[more]
B9T6S5_RICCO	2.1e-36	58.13	DNA binding protein, putative OS=Ricinus communis GN=RCOM_0016380 PE=4 SV=1	[more]
A0A067F6A3_CITSI	4.7e-36	40.96	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017964mg PE=4 SV=1	[more]

BLAST of CmaCh14G008170 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73830.1	4.8e-32	64.81	BR enhanced expression 3	[more]
AT1G18400.1	1.4e-31	66.35	BR enhanced expression 1	[more]
AT1G25330.1	7.0e-31	63.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G50915.1	1.5e-25	47.76	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G62610.1	3.3e-25	54.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of CmaCh14G008170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114293\|ref\|XP_008456996.1\|	5.9e-80	72.22	PREDICTED: transcription factor BEE 3-like isoform X2 [Cucumis melo]	[more]
gi\|778680713\|ref\|XP_011651380.1\|	1.2e-77	69.46	PREDICTED: transcription factor BEE 3-like isoform X4 [Cucumis sativus]	[more]
gi\|659114295\|ref\|XP_008456998.1\|	7.9e-77	71.93	PREDICTED: transcription factor BEE 3-like isoform X3 [Cucumis melo]	[more]
gi\|700202628\|gb\|KGN57761.1\|	8.7e-76	73.27	hypothetical protein Csa_3G282490 [Cucumis sativus]	[more]
gi\|778680705\|ref\|XP_011651377.1\|	4.1e-73	62.17	PREDICTED: transcription factor BEE 3-like isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G008170.1	CmaCh14G008170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 136..198 score: 6.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 140..187 score: 4.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 142..192 score: 4.8
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 136..186 score: 15
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 134..198 score: 1.7
None	No IPR available	PANTHER	PTHR12565	STEROL REGULATORY ELEMENT-BINDING PROTEIN	coord: 107..200 score: 5.2
None	No IPR available	PANTHER	PTHR12565:SF128	TRANSCRIPTION FACTOR BHLH75	coord: 107..200 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh14G008170	Cucsa.031290	Cucumber (Gy14) v1	cgycmaB0005
CmaCh14G008170	Cla013237	Watermelon (97103) v1	cmawmB243
CmaCh14G008170	Csa3G282490	Cucumber (Chinese Long) v2	cmacuB242
CmaCh14G008170	MELO3C020189	Melon (DHL92) v3.5.1	cmameB243
CmaCh14G008170	ClCG05G011630	Watermelon (Charleston Gray)	cmawcgB234
CmaCh14G008170	CSPI03G20800	Wild cucumber (PI 183967)	cmacpiB244
CmaCh14G008170	CmoCh01G004000	Cucurbita moschata (Rifu)	cmacmoB257
CmaCh14G008170	CmoCh14G008300	Cucurbita moschata (Rifu)	cmacmoB244
CmaCh14G008170	Lsi05G003760	Bottle gourd (USVL1VR-Ls)	cmalsiB249
CmaCh14G008170	Cp4.1LG02g16960	Cucurbita pepo (Zucchini)	cmacpeB279
CmaCh14G008170	Cp4.1LG03g06130	Cucurbita pepo (Zucchini)	cmacpeB283
CmaCh14G008170	MELO3C020189.2	Melon (DHL92) v3.6.1	cmamedB274
CmaCh14G008170	CsaV3_3G020750	Cucumber (Chinese Long) v3	cmacucB0281
CmaCh14G008170	Cla97C05G093690	Watermelon (97103) v2	cmawmbB264
CmaCh14G008170	Bhi01G001473	Wax gourd	cmawgoB0319
CmaCh14G008170	CsGy3G020400	Cucumber (Gy14) v2	cgybcmaB308
CmaCh14G008170	Carg22266	Silver-seed gourd	carcmaB0668

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh14G008170	CmaCh01G003810	Cucurbita maxima (Rimu)	cmacmaB255

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh14G008170	Silver-seed gourd	carcmaB1057