Csa3G239330 (gene) Cucumber (Chinese Long) v2

NameCsa3G239330
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 15400393 .. 15401042 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAGAATGGCAGGCAAGGCTGCCAAATCTGTGGCGAAGGCCATCAGCGAGTATCAGTATCCATGGCAGGAGAAGTTGGCAAAATACAAGAATGAACTATCCAAAGGGGTTTGGGGTTACTGGGAACTAGGTGCATGGAAGTCACTGGGCATAAGTGCACGTCACCGAGCCAGACTTCGCAAGGAAGTACTTCTTGCTGGGCAGGATTGGCCATATGATCCAGAGAGGAAAGAGATGAGAACCAAGAGGAAAGGGCACAAATGCGATCGTATTGCAGCAGAGAAACGGGAAAACACTGCAAGGTTGATGGAGAAAATGCCAGATATGTTGCTTCAATACAAGAAGCGCAGGTGGGAGAAGAAGATGAAGGAAGAAGAGAAGAAGAAGCAGGACAGCTGATATGTTCTTGTTTTTTTTACATGGTCCTGACAACTATAGATGGTTGGTTTCTTGCTAGTTTCTCATGCATGGGAGATGTTGGTTTTGTTATCAATACTTTCACTTTGTAGGAATTAATAATCTTTGATTTCCCTTACATGACAGTGATCTTAAGTAAATTGATGTTTGTATTGATATAAGATAACAAAATGAGGAAGAATCAGAGCACTCATAATTTTCCATGTATAAAAACATTTCTCTTTACTGCTGCT

mRNA sequence

ATGGCAGGCAAGGCTGCCAAATCTGTGGCGAAGGCCATCAGCGAGTATCAGTATCCATGGCAGGAGAAGTTGGCAAAATACAAGAATGAACTATCCAAAGGGGTTTGGGGTTACTGGGAACTAGGTGCATGGAAGTCACTGGGCATAAGTGCACGTCACCGAGCCAGACTTCGCAAGGAAGTACTTCTTGCTGGGCAGGATTGGCCATATGATCCAGAGAGGAAAGAGATGAGAACCAAGAGGAAAGGGCACAAATGCGATCGTATTGCAGCAGAGAAACGGGAAAACACTGCAAGGTTGATGGAGAAAATGCCAGATATGTTGCTTCAATACAAGAAGCGCAGGTGGGAGAAGAAGATGAAGGAAGAAGAGAAGAAGAAGCAGGACAGCTGA

Coding sequence (CDS)

ATGGCAGGCAAGGCTGCCAAATCTGTGGCGAAGGCCATCAGCGAGTATCAGTATCCATGGCAGGAGAAGTTGGCAAAATACAAGAATGAACTATCCAAAGGGGTTTGGGGTTACTGGGAACTAGGTGCATGGAAGTCACTGGGCATAAGTGCACGTCACCGAGCCAGACTTCGCAAGGAAGTACTTCTTGCTGGGCAGGATTGGCCATATGATCCAGAGAGGAAAGAGATGAGAACCAAGAGGAAAGGGCACAAATGCGATCGTATTGCAGCAGAGAAACGGGAAAACACTGCAAGGTTGATGGAGAAAATGCCAGATATGTTGCTTCAATACAAGAAGCGCAGGTGGGAGAAGAAGATGAAGGAAGAAGAGAAGAAGAAGCAGGACAGCTGA

Protein sequence

MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKEVLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKMKEEEKKKQDS*
BLAST of Csa3G239330 vs. TrEMBL
Match: A0A0A0L9K9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239330 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 3.0e-70
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE
Sbjct: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM
Sbjct: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120

Query: 121 KEEEKKKQDS 131
           KEEEKKKQDS
Sbjct: 121 KEEEKKKQDS 130

BLAST of Csa3G239330 vs. TrEMBL
Match: E5GBA1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 2.6e-69
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWK LGISARHRARLRKE
Sbjct: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKHLGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM
Sbjct: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120

Query: 121 KEEEKKKQDS 131
           KEEEKKKQD+
Sbjct: 121 KEEEKKKQDN 130

BLAST of Csa3G239330 vs. TrEMBL
Match: A0A059BMY0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01156 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.2e-60
Identity = 111/126 (88.10%), Postives = 119/126 (94.44%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAGKAA+SV K I+EYQYPW+EKL KY++ELSKGVWGYWELGAWK LGISAR RARLRKE
Sbjct: 77  MAGKAAQSVVKTIAEYQYPWREKLVKYRSELSKGVWGYWELGAWKPLGISARRRARLRKE 136

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           VLLAG+DWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPD+L  YKKRRWEKKM
Sbjct: 137 VLLAGEDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDLLQAYKKRRWEKKM 196

Query: 121 KEEEKK 127
           KEE+KK
Sbjct: 197 KEEDKK 202

BLAST of Csa3G239330 vs. TrEMBL
Match: A0A0D2UJ24_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G103900 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 6.3e-60
Identity = 110/127 (86.61%), Postives = 119/127 (93.70%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAGKAA+SV KA+ EYQYPW+EKLAKYK ELSKGVWGYWELGAWK LGISARHRARLRKE
Sbjct: 1   MAGKAAQSVVKAVGEYQYPWREKLAKYKVELSKGVWGYWELGAWKPLGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           +LLAGQDWPYDPE+KEMR+K KGHKCDRIAAE+RENTA LM+KMP+MLL YKKRRWEKKM
Sbjct: 61  MLLAGQDWPYDPEKKEMRSKMKGHKCDRIAAERRENTANLMQKMPEMLLAYKKRRWEKKM 120

Query: 121 KEEEKKK 128
           KEEEK K
Sbjct: 121 KEEEKAK 127

BLAST of Csa3G239330 vs. TrEMBL
Match: W9SCK4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011881 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 4.1e-59
Identity = 110/127 (86.61%), Postives = 117/127 (92.13%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAGKAAKS  KAI EYQYPW+EKL KYK+ELSKGVWGYW LGAWK LGISAR RARLRKE
Sbjct: 1   MAGKAAKSAVKAIGEYQYPWREKLVKYKDELSKGVWGYWHLGAWKPLGISARQRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           VLLAG+DWPYDPERKEMRTKRKGHK D+IAAEKRENTARLMEKMP+MLL YKKRRWEKKM
Sbjct: 61  VLLAGEDWPYDPERKEMRTKRKGHKVDKIAAEKRENTARLMEKMPEMLLAYKKRRWEKKM 120

Query: 121 KEEEKKK 128
           KE++K K
Sbjct: 121 KEDDKDK 127

BLAST of Csa3G239330 vs. TAIR10
Match: AT4G22000.1 (AT4G22000.1 unknown protein)

HSP 1 Score: 219.2 bits (557), Expect = 1.5e-57
Identity = 100/129 (77.52%), Postives = 112/129 (86.82%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAGKAA++VAK ++ +Q+PW+ KL KY+ EL+KGVWGYWE+GAWK LGISAR RA LRKE
Sbjct: 1   MAGKAAEAVAKTVTGFQHPWRAKLDKYRTELTKGVWGYWEMGAWKPLGISARRRAMLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           VL  G+DWPYDPERK MRTKRKGHKCDRI+AEKRENTA+LM KMP MLL YKKRRWEKKM
Sbjct: 61  VLTNGEDWPYDPERKAMRTKRKGHKCDRISAEKRENTAKLMLKMPQMLLDYKKRRWEKKM 120

Query: 121 KEEEKKKQD 130
           KEEEK K+D
Sbjct: 121 KEEEKAKED 129

BLAST of Csa3G239330 vs. NCBI nr
Match: gi|449456975|ref|XP_004146224.1| (PREDICTED: uncharacterized protein LOC101216182 [Cucumis sativus])

HSP 1 Score: 272.3 bits (695), Expect = 4.3e-70
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE
Sbjct: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM
Sbjct: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120

Query: 121 KEEEKKKQDS 131
           KEEEKKKQDS
Sbjct: 121 KEEEKKKQDS 130

BLAST of Csa3G239330 vs. NCBI nr
Match: gi|659133630|ref|XP_008466828.1| (PREDICTED: uncharacterized protein LOC103504139 [Cucumis melo])

HSP 1 Score: 269.2 bits (687), Expect = 3.7e-69
Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWK LGISARHRARLRKE
Sbjct: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKHLGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM
Sbjct: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120

Query: 121 KEEEKKKQDS 131
           KEEEKKKQD+
Sbjct: 121 KEEEKKKQDN 130

BLAST of Csa3G239330 vs. NCBI nr
Match: gi|1009123271|ref|XP_015878452.1| (PREDICTED: uncharacterized protein LOC107414780 [Ziziphus jujuba])

HSP 1 Score: 245.0 bits (624), Expect = 7.4e-62
Identity = 114/127 (89.76%), Postives = 122/127 (96.06%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAGKAAKSVAKAI EYQYPW+EKL KYK+ELSKGVWGYWELGAWK LG+SARHRARLRKE
Sbjct: 1   MAGKAAKSVAKAIGEYQYPWREKLVKYKDELSKGVWGYWELGAWKPLGVSARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           VLLAG+DWPYDPERKEMRTKRKGHK DRI+AEKRENTARLMEKMP+MLL+YKKRRWEKKM
Sbjct: 61  VLLAGEDWPYDPERKEMRTKRKGHKHDRISAEKRENTARLMEKMPEMLLEYKKRRWEKKM 120

Query: 121 KEEEKKK 128
           KEE+K K
Sbjct: 121 KEEDKNK 127

BLAST of Csa3G239330 vs. NCBI nr
Match: gi|470144709|ref|XP_004307990.1| (PREDICTED: uncharacterized protein LOC101314320 [Fragaria vesca subsp. vesca])

HSP 1 Score: 245.0 bits (624), Expect = 7.4e-62
Identity = 116/127 (91.34%), Postives = 120/127 (94.49%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAG+AAKSVAKAI EYQYPW+EKL KYK ELSKGVWGYW LGAWK+ GISARHRARLRKE
Sbjct: 1   MAGQAAKSVAKAIGEYQYPWREKLVKYKTELSKGVWGYWHLGAWKASGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           VLLAGQDWPYDPERKEMRTKRKGHK DRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM
Sbjct: 61  VLLAGQDWPYDPERKEMRTKRKGHKVDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120

Query: 121 KEEEKKK 128
           KEE+K K
Sbjct: 121 KEEDKGK 127

BLAST of Csa3G239330 vs. NCBI nr
Match: gi|629101915|gb|KCW67384.1| (hypothetical protein EUGRSUZ_F01156 [Eucalyptus grandis])

HSP 1 Score: 239.6 bits (610), Expect = 3.1e-60
Identity = 111/126 (88.10%), Postives = 119/126 (94.44%), Query Frame = 1

Query: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60
           MAGKAA+SV K I+EYQYPW+EKL KY++ELSKGVWGYWELGAWK LGISAR RARLRKE
Sbjct: 77  MAGKAAQSVVKTIAEYQYPWREKLVKYRSELSKGVWGYWELGAWKPLGISARRRARLRKE 136

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120
           VLLAG+DWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPD+L  YKKRRWEKKM
Sbjct: 137 VLLAGEDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDLLQAYKKRRWEKKM 196

Query: 121 KEEEKK 127
           KEE+KK
Sbjct: 197 KEEDKK 202

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L9K9_CUCSA3.0e-70100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239330 PE=4 SV=1[more]
E5GBA1_CUCME2.6e-6998.46Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A059BMY0_EUCGR2.2e-6088.10Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01156 PE=4 SV=1[more]
A0A0D2UJ24_GOSRA6.3e-6086.61Uncharacterized protein OS=Gossypium raimondii GN=B456_009G103900 PE=4 SV=1[more]
W9SCK4_9ROSA4.1e-5986.61Uncharacterized protein OS=Morus notabilis GN=L484_011881 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G22000.11.5e-5777.52 unknown protein[more]
Match NameE-valueIdentityDescription
gi|449456975|ref|XP_004146224.1|4.3e-70100.00PREDICTED: uncharacterized protein LOC101216182 [Cucumis sativus][more]
gi|659133630|ref|XP_008466828.1|3.7e-6998.46PREDICTED: uncharacterized protein LOC103504139 [Cucumis melo][more]
gi|1009123271|ref|XP_015878452.1|7.4e-6289.76PREDICTED: uncharacterized protein LOC107414780 [Ziziphus jujuba][more]
gi|470144709|ref|XP_004307990.1|7.4e-6291.34PREDICTED: uncharacterized protein LOC101314320 [Fragaria vesca subsp. vesca][more]
gi|629101915|gb|KCW67384.1|3.1e-6088.10hypothetical protein EUGRSUZ_F01156 [Eucalyptus grandis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016740 transferase activity
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU104770cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G239330.1Csa3G239330.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU104770CU104770transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 113..130
scor
NoneNo IPR availablePANTHERPTHR36781FAMILY NOT NAMEDcoord: 2..130
score: 2.3

The following gene(s) are paralogous to this gene:

None