CSPI03G19800 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACAGAAACATTTCGAAGAAAGAATGGCAGGCAAGGCTGCCAAATCTGTGGCGAAGGCCATCAGCGAGTATCAGTATCCATGGCAGGAGAAGTTGGCAAAATACAAGAATGAACTATCCAAAGGGGTTTGGGGTTACTGGGAACTAGGTGCATGGAAGTCACTGGGCATAAGTGCACGTCACCGAGCCAGACTTCGCAAGGAAGTACTTCTTGCTGGGCAGGATTGGCCATATGATCCAGAGAGGAAAGAGATGAGAACCAAGAGGAAAGGGCACAAATGCGATCGTATTGCAGCAGAGAAACGGGAAAACACTGCAAGGTTGATGGAGAAAATGCCAGATATGTTGCTTCAATACAAGAAGCGCAGGTGGGAGAAGAAGATGAAGGAAGAAGAGAAGAAGAAGCAGGACAGCTGATATGTTCTTGTTTTTTTTACATGGTCCTGACAACTATAGATGGTTGGTTTCTTGCTAGTTTCTCATGCATGGGAGATGTTGGTTTTGTTATCAATACTTTCACTTTGTAGGAATTAATAATCTTTGATTTCCCTTACATGACAGTGATCTTAAGTAAATTGATGTTTGTATTGATATAAGATAACAAAATGAGGAAGAATCAGAGCACTCATAATTTTCCATGTATAAAAACATTTCTCTTTACTGCTGCTCTTAGAAAATATTCTCT CAGAAACATTTCGAAGAAAGAATGGCAGGCAAGGCTGCCAAATCTGTGGCGAAGGCCATCAGCGAGTATCAGTATCCATGGCAGGAGAAGTTGGCAAAATACAAGAATGAACTATCCAAAGGGGTTTGGGGTTACTGGGAACTAGGTGCATGGAAGTCACTGGGCATAAGTGCACGTCACCGAGCCAGACTTCGCAAGGAAGTACTTCTTGCTGGGCAGGATTGGCCATATGATCCAGAGAGGAAAGAGATGAGAACCAAGAGGAAAGGGCACAAATGCGATCGTATTGCAGCAGAGAAACGGGAAAACACTGCAAGGTTGATGGAGAAAATGCCAGATATGTTGCTTCAATACAAGAAGCGCAGGTGGGAGAAGAAGATGAAGGAAGAAGAGAAGAAGAAGCAGGACAGCTGA CAGAAACATTTCGAAGAAAGAATGGCAGGCAAGGCTGCCAAATCTGTGGCGAAGGCCATCAGCGAGTATCAGTATCCATGGCAGGAGAAGTTGGCAAAATACAAGAATGAACTATCCAAAGGGGTTTGGGGTTACTGGGAACTAGGTGCATGGAAGTCACTGGGCATAAGTGCACGTCACCGAGCCAGACTTCGCAAGGAAGTACTTCTTGCTGGGCAGGATTGGCCATATGATCCAGAGAGGAAAGAGATGAGAACCAAGAGGAAAGGGCACAAATGCGATCGTATTGCAGCAGAGAAACGGGAAAACACTGCAAGGTTGATGGAGAAAATGCCAGATATGTTGCTTCAATACAAGAAGCGCAGGTGGGAGAAGAAGATGAAGGAAGAAGAGAAGAAGAAGCAGGACAGCTGA
BLAST of CSPI03G19800 vs. TrEMBL
Match: A0A0A0L9K9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239330 PE=4 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 2.8e-66 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1
BLAST of CSPI03G19800 vs. TrEMBL
Match: E5GBA1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 256.1 bits (653), Expect = 2.4e-65 Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 1
BLAST of CSPI03G19800 vs. TrEMBL
Match: A0A059BMY0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01156 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 9.0e-57 Identity = 111/126 (88.10%), Postives = 119/126 (94.44%), Query Frame = 1
BLAST of CSPI03G19800 vs. TrEMBL
Match: A0A0D2UJ24_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G103900 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.5e-56 Identity = 110/127 (86.61%), Postives = 119/127 (93.70%), Query Frame = 1
BLAST of CSPI03G19800 vs. TrEMBL
Match: W9SCK4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011881 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 2.9e-55 Identity = 110/127 (86.61%), Postives = 117/127 (92.13%), Query Frame = 1
BLAST of CSPI03G19800 vs. TAIR10
Match: AT4G22000.1 (AT4G22000.1 unknown protein) HSP 1 Score: 205.7 bits (522), Expect = 1.9e-53 Identity = 100/129 (77.52%), Postives = 114/129 (88.37%), Query Frame = 1
BLAST of CSPI03G19800 vs. NCBI nr
Match: gi|449456975|ref|XP_004146224.1| (PREDICTED: uncharacterized protein LOC101216182 [Cucumis sativus]) HSP 1 Score: 259.2 bits (661), Expect = 4.0e-66 Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1
BLAST of CSPI03G19800 vs. NCBI nr
Match: gi|659133630|ref|XP_008466828.1| (PREDICTED: uncharacterized protein LOC103504139 [Cucumis melo]) HSP 1 Score: 256.1 bits (653), Expect = 3.4e-65 Identity = 128/130 (98.46%), Postives = 129/130 (99.23%), Query Frame = 1
BLAST of CSPI03G19800 vs. NCBI nr
Match: gi|1009123271|ref|XP_015878452.1| (PREDICTED: uncharacterized protein LOC107414780 [Ziziphus jujuba]) HSP 1 Score: 232.3 bits (591), Expect = 5.3e-58 Identity = 114/127 (89.76%), Postives = 122/127 (96.06%), Query Frame = 1
BLAST of CSPI03G19800 vs. NCBI nr
Match: gi|470144709|ref|XP_004307990.1| (PREDICTED: uncharacterized protein LOC101314320 [Fragaria vesca subsp. vesca]) HSP 1 Score: 232.3 bits (591), Expect = 5.3e-58 Identity = 116/127 (91.34%), Postives = 120/127 (94.49%), Query Frame = 1
BLAST of CSPI03G19800 vs. NCBI nr
Match: gi|629101915|gb|KCW67384.1| (hypothetical protein EUGRSUZ_F01156 [Eucalyptus grandis]) HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56 Identity = 111/126 (88.10%), Postives = 119/126 (94.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |