Lsi05G001040 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G001040
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Protein-tyrosine sulfotransferase-like protein
Location	chr05 : 1790411 .. 1792671 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAAAAAAATCTTGCCTAAATGCCCACAACCTCCACTTCTCTGTTTATGCCCTTTTGCGAACTAAAACCTAAACTCACCCAAACATCACGAACGTTGAGCGGCCACACGCGAACCTCTAGCACTCCTTAGCGACATCAACCATCTCTTCTCTCCTCCGTCTTCCTCGCCGTCAGCCAGCCTCGCCGCCGCCTCCTAGGTTAGTTGATTTCAATTTCTCATTTTCCATGCCTTTGCGATTGAATTCGAATGGGCATGAATAGGCTATCATTATAAACTATCAACATTGGATCTGAATCTGTAGACGCTACAAATATACTGCATCTGAACTTGTAATCGGAATAAATCACCAGTCATTTTAATCTAACAATCTTATGCTGGCGTATTTCCCAATTTCTGGGTAATGTTACTCTTTACTCGTGAAATGACATTGCAATGATAAGTCTTGTAATTGGATATTGTTGGAATGTGGACTTGCGATGACAAGTCGTTCTGCCATTGTTATTTTTTGGATATGAAATATGGATATCATTGAAGGTTAGTAGAGTATGCTCTTTTGATTATGTTTACTTCTTATCAAAGTATTCAAGAAGAAAGTAACATGAAATTGTTCATACATTTCTTTTAGGGTTTAATCTGAATTTTGTTCATTGGCTTAATGTGGGTGTCAAGTGCTAGTCAGTAGTCACTTTAAACAATATTTTAGCACGTTACAAATCATGCAAAATAGATAATAAATCCAACCAGTAAAATAACTCAATGAAGGTTCTGTCCATTGACCCTAGTGAGCTTCCCCCCTCCAAACTGAACCGATCCGACTGAATTGCTCTCCTGGTTTCATCTTTTGTTCTTAAAAAGTTAACATTCTGAACTCTGTCCCTTCTCAACTTCATGTTATATTTAGGATTTGTCTAATCAAATGAATCTAGTGTAAGTAGCGGTTTATGCATCAGTGTTGTTAAATCATATATTAACCCAAAAGCTTTAGTTGATGTATGAAGATAAATTCAATATTATATCATCTAACACTCTCCCTCACTTGTGGGCTTGAAATATGTAGAAGACCTAACAAGTGAAAATTAATATTAGTCGGGGAGGAAATAACATTATAGGGGTTTGAACACAACTTCTGCACTTGTTTTGATACTATGTTAAATTGCCAATTGACCCAAAAGTTTAAGCTGGTGGGTGAAAACAAATTTAATATTATATCATCTAATGAGTGTCAAGTGATAAGTTTAGCTCTAATCCTCTTTTAAGGGTTTGCAGTGTCCCTTTTGTGCCTCTGTTGCATAGTTTTAGTACATATGGAAATGGTTAGTCATTATGGAACCTGATGCTTCTACGCTTGTCCAACAGTTGAAAATTTCTAATTTGATATTCTTTCCCTCTCTTCAACCAAGCTTTCTACATTTTAGTTACTTTTGTTCTCTATGCCTTTTTTCTTCCGCTGCATAATCCGGTTATTTGATTTCTCCTTTGGTCTCTTACAAGCATAAACATTTCCAAGAAAGAATGGCAGGCAAGGCTGCCAAATCTGTGGTGAAATACATCGGCGAGTATCAGTATCCATGGCAGGAGAAGTTGACAAAATACAAGAATGAACTATCCAAAGGAGTTTGGGGTTACTGGGAACTAGGGGCATGGAAGCCACTGGGCATAAGCGCACGTCACCGTGCCAGACTTCGCAAGGAAGTACTTCTTGCTGGGCAGGATTGGCCATATGATCCAGAGAGGAAAGAGATGAGAACCAAGAGGAAAGGGCACAAATGCGATCGTATAGCTGCAGAAAAACGGGAAAACACTGCCAGGTTGATGGAGAAAATGCCAGATATGTTGCTTGAATACAAGAAGCGCAGATGGGAGAAGAAGATGAAGGAAGAAGAGAAGAAAAAGCAGCAGAACTGATATGGTTTTGTTAATTAGTCTTGACAACTATATGGTTGGTTTCTTGCTAGTTTCTCATGCATGGGGATCTTGCTTTTGTTATCTATAGTTGGATTAGATATCAGTATATCACTTTGTAGTCATTAATAATCTTTGATTACATATTTATGGTTATCCTTTACATCACAGTGATATGAATCAAATTGATGTTTGTATTGAAATAAGATAACAAAATGAGGGAGAATTAGAGCACTCTCTCAGTCTCCCATATCAGAAAATCATGTTAGAAAATATTTTGTTGTGAATGAACAAGATATTAAGGAATTGTCTTTACGTAAAATCATAATTATTGATACAAGCTTTTTCCAA

mRNA sequence

AAAAAAAAAAAAAAAATCTTGCCTAAATGCCCACAACCTCCACTTCTCTGTTTATGCCCTTTTGCGAACTAAAACCTAAACTCACCCAAACATCACGAACGTTGAGCGGCCACACGCGAACCTCTAGCACTCCTTAGCGACATCAACCATCTCTTCTCTCCTCCGTCTTCCTCGCCGTCAGCCAGCCTCGCCGCCGCCTCCTAGATGGCAGGCAAGGCTGCCAAATCTGTGGTGAAATACATCGGCGAGTATCAGTATCCATGGCAGGAGAAGTTGACAAAATACAAGAATGAACTATCCAAAGGAGTTTGGGGTTACTGGGAACTAGGGGCATGGAAGCCACTGGGCATAAGCGCACGTCACCGTGCCAGACTTCGCAAGGAAGTACTTCTTGCTGGGCAGGATTGGCCATATGATCCAGAGAGGAAAGAGATGAGAACCAAGAGGAAAGGGCACAAATGCGATCGTATAGCTGCAGAAAAACGGGAAAACACTGCCAGGTTGATGGAGAAAATGCCAGATATGTTGCTTGAATACAAGAAGCGCAGATGGGAGAAGAAGATGAAGGAAGAAGAGAAGAAAAAGCAGCAGAACTGATATGGTTTTGTTAATTAGTCTTGACAACTATATGGTTGGTTTCTTGCTAGTTTCTCATGCATGGGGATCTTGCTTTTGTTATCTATAGTTGGATTAGATATCAGTATATCACTTTGTAGTCATTAATAATCTTTGATTACATATTTATGGTTATCCTTTACATCACAGTGATATGAATCAAATTGATGTTTGTATTGAAATAAGATAACAAAATGAGGGAGAATTAGAGCACTCTCTCAGTCTCCCATATCAGAAAATCATGTTAGAAAATATTTTGTTGTGAATGAACAAGATATTAAGGAATTGTCTTTACGTAAAATCATAATTATTGATACAAGCTTTTTCCAA

Coding sequence (CDS)

ATGGCAGGCAAGGCTGCCAAATCTGTGGTGAAATACATCGGCGAGTATCAGTATCCATGGCAGGAGAAGTTGACAAAATACAAGAATGAACTATCCAAAGGAGTTTGGGGTTACTGGGAACTAGGGGCATGGAAGCCACTGGGCATAAGCGCACGTCACCGTGCCAGACTTCGCAAGGAAGTACTTCTTGCTGGGCAGGATTGGCCATATGATCCAGAGAGGAAAGAGATGAGAACCAAGAGGAAAGGGCACAAATGCGATCGTATAGCTGCAGAAAAACGGGAAAACACTGCCAGGTTGATGGAGAAAATGCCAGATATGTTGCTTGAATACAAGAAGCGCAGATGGGAGAAGAAGATGAAGGAAGAAGAGAAGAAAAAGCAGCAGAACTGA

Protein sequence

MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKEVLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKMKEEEKKKQQN

Homology

[Close]

BLAST of Lsi05G001040 vs. TrEMBL
Match: E5GBA1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 1.8e-62
Identity = 123/130 (94.62%), Postives = 124/130 (95.38%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAAKSV K I EYQYPWQEKL KYKNELSKGVWGYWELGAWK LGISARHRARLRKE
Sbjct: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKHLGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLL+YKKRRWEKKM
Sbjct: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120

Query: 121 KEEEKKKQQN 131
           KEEEKKKQ N
Sbjct: 121 KEEEKKKQDN 130

[Close]

BLAST of Lsi05G001040 vs. TrEMBL
Match: A0A0A0L9K9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239330 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 5.1e-62
Identity = 122/130 (93.85%), Postives = 124/130 (95.38%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAAKSV K I EYQYPWQEKL KYKNELSKGVWGYWELGAWK LGISARHRARLRKE
Sbjct: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLL+YKKRRWEKKM
Sbjct: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120

Query: 121 KEEEKKKQQN 131
           KEEEKKKQ +
Sbjct: 121 KEEEKKKQDS 130

[Close]

BLAST of Lsi05G001040 vs. TrEMBL
Match: A0A059BMY0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01156 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 5.9e-58
Identity = 113/126 (89.68%), Postives = 120/126 (95.24%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAA+SVVK I EYQYPW+EKL KY++ELSKGVWGYWELGAWKPLGISAR RARLRKE
Sbjct: 77  MAGKAAQSVVKTIAEYQYPWREKLVKYRSELSKGVWGYWELGAWKPLGISARRRARLRKE 136

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           VLLAG+DWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPD+L  YKKRRWEKKM
Sbjct: 137 VLLAGEDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDLLQAYKKRRWEKKM 196

Query: 121 KEEEKK 127
           KEE+KK
Sbjct: 197 KEEDKK 202

[Close]

BLAST of Lsi05G001040 vs. TrEMBL
Match: A0A0D2UJ24_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G103900 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 8.5e-57
Identity = 111/129 (86.05%), Postives = 121/129 (93.80%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAA+SVVK +GEYQYPW+EKL KYK ELSKGVWGYWELGAWKPLGISARHRARLRKE
Sbjct: 1   MAGKAAQSVVKAVGEYQYPWREKLAKYKVELSKGVWGYWELGAWKPLGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           +LLAGQDWPYDPE+KEMR+K KGHKCDRIAAE+RENTA LM+KMP+MLL YKKRRWEKKM
Sbjct: 61  MLLAGQDWPYDPEKKEMRSKMKGHKCDRIAAERRENTANLMQKMPEMLLAYKKRRWEKKM 120

Query: 121 KEEEKKKQQ 130
           KEEEK K +
Sbjct: 121 KEEEKAKDK 129

[Close]

BLAST of Lsi05G001040 vs. TrEMBL
Match: W9SCK4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011881 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.1e-56
Identity = 112/127 (88.19%), Postives = 119/127 (93.70%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAAKS VK IGEYQYPW+EKL KYK+ELSKGVWGYW LGAWKPLGISAR RARLRKE
Sbjct: 1   MAGKAAKSAVKAIGEYQYPWREKLVKYKDELSKGVWGYWHLGAWKPLGISARQRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           VLLAG+DWPYDPERKEMRTKRKGHK D+IAAEKRENTARLMEKMP+MLL YKKRRWEKKM
Sbjct: 61  VLLAGEDWPYDPERKEMRTKRKGHKVDKIAAEKRENTARLMEKMPEMLLAYKKRRWEKKM 120

Query: 121 KEEEKKK 128
           KE++K K
Sbjct: 121 KEDDKDK 127

[Close]

BLAST of Lsi05G001040 vs. TAIR10
Match: AT4G22000.1 (AT4G22000.1 unknown protein)

HSP 1 Score: 204.5 bits (519), Expect = 3.9e-53
Identity = 99/128 (77.34%), Postives = 113/128 (88.28%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAA++V K +  +Q+PW+ KL KY+ EL+KGVWGYWE+GAWKPLGISAR RA LRKE
Sbjct: 1   MAGKAAEAVAKTVTGFQHPWRAKLDKYRTELTKGVWGYWEMGAWKPLGISARRRAMLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           VL  G+DWPYDPERK MRTKRKGHKCDRI+AEKRENTA+LM KMP MLL+YKKRRWEKKM
Sbjct: 61  VLTNGEDWPYDPERKAMRTKRKGHKCDRISAEKRENTAKLMLKMPQMLLDYKKRRWEKKM 120

Query: 121 KEEEKKKQ 129
           KEEEK K+
Sbjct: 121 KEEEKAKE 128

[Close]

BLAST of Lsi05G001040 vs. NCBI nr
Match: gi|659133630|ref|XP_008466828.1| (PREDICTED: uncharacterized protein LOC103504139 [Cucumis melo])

HSP 1 Score: 246.5 bits (628), Expect = 2.5e-62
Identity = 123/130 (94.62%), Postives = 124/130 (95.38%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAAKSV K I EYQYPWQEKL KYKNELSKGVWGYWELGAWK LGISARHRARLRKE
Sbjct: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKHLGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLL+YKKRRWEKKM
Sbjct: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120

Query: 121 KEEEKKKQQN 131
           KEEEKKKQ N
Sbjct: 121 KEEEKKKQDN 130

[Close]

BLAST of Lsi05G001040 vs. NCBI nr
Match: gi|449456975|ref|XP_004146224.1| (PREDICTED: uncharacterized protein LOC101216182 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 7.4e-62
Identity = 122/130 (93.85%), Postives = 124/130 (95.38%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAAKSV K I EYQYPWQEKL KYKNELSKGVWGYWELGAWK LGISARHRARLRKE
Sbjct: 1   MAGKAAKSVAKAISEYQYPWQEKLAKYKNELSKGVWGYWELGAWKSLGISARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLL+YKKRRWEKKM
Sbjct: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLQYKKRRWEKKM 120

Query: 121 KEEEKKKQQN 131
           KEEEKKKQ +
Sbjct: 121 KEEEKKKQDS 130

[Close]

BLAST of Lsi05G001040 vs. NCBI nr
Match: gi|1009123271|ref|XP_015878452.1| (PREDICTED: uncharacterized protein LOC107414780 [Ziziphus jujuba])

HSP 1 Score: 235.0 bits (598), Expect = 7.6e-59
Identity = 115/127 (90.55%), Postives = 122/127 (96.06%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAAKSV K IGEYQYPW+EKL KYK+ELSKGVWGYWELGAWKPLG+SARHRARLRKE
Sbjct: 1   MAGKAAKSVAKAIGEYQYPWREKLVKYKDELSKGVWGYWELGAWKPLGVSARHRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           VLLAG+DWPYDPERKEMRTKRKGHK DRI+AEKRENTARLMEKMP+MLLEYKKRRWEKKM
Sbjct: 61  VLLAGEDWPYDPERKEMRTKRKGHKHDRISAEKRENTARLMEKMPEMLLEYKKRRWEKKM 120

Query: 121 KEEEKKK 128
           KEE+K K
Sbjct: 121 KEEDKNK 127

[Close]

BLAST of Lsi05G001040 vs. NCBI nr
Match: gi|629101915|gb|KCW67384.1| (hypothetical protein EUGRSUZ_F01156 [Eucalyptus grandis])

HSP 1 Score: 231.5 bits (589), Expect = 8.4e-58
Identity = 113/126 (89.68%), Postives = 120/126 (95.24%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAA+SVVK I EYQYPW+EKL KY++ELSKGVWGYWELGAWKPLGISAR RARLRKE
Sbjct: 77  MAGKAAQSVVKTIAEYQYPWREKLVKYRSELSKGVWGYWELGAWKPLGISARRRARLRKE 136

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           VLLAG+DWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPD+L  YKKRRWEKKM
Sbjct: 137 VLLAGEDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDLLQAYKKRRWEKKM 196

Query: 121 KEEEKK 127
           KEE+KK
Sbjct: 197 KEEDKK 202

[Close]

BLAST of Lsi05G001040 vs. NCBI nr
Match: gi|702365136|ref|XP_010060601.1| (PREDICTED: uncharacterized protein LOC104448472 [Eucalyptus grandis])

HSP 1 Score: 231.5 bits (589), Expect = 8.4e-58
Identity = 113/126 (89.68%), Postives = 120/126 (95.24%), Query Frame = 1


Query: 1   MAGKAAKSVVKYIGEYQYPWQEKLTKYKNELSKGVWGYWELGAWKPLGISARHRARLRKE 60
           MAGKAA+SVVK I EYQYPW+EKL KY++ELSKGVWGYWELGAWKPLGISAR RARLRKE
Sbjct: 1   MAGKAAQSVVKTIAEYQYPWREKLVKYRSELSKGVWGYWELGAWKPLGISARRRARLRKE 60

Query: 61  VLLAGQDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDMLLEYKKRRWEKKM 120
           VLLAG+DWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPD+L  YKKRRWEKKM
Sbjct: 61  VLLAGEDWPYDPERKEMRTKRKGHKCDRIAAEKRENTARLMEKMPDLLQAYKKRRWEKKM 120

Query: 121 KEEEKK 127
           KEE+KK
Sbjct: 121 KEEDKK 126

The following BLAST results are available for this feature:

BLAST of Lsi05G001040 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi05G001040 vs. TrEMBL


Match Name	E-value	Identity	Description
E5GBA1_CUCME	1.8e-62	94.62	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0L9K9_CUCSA	5.1e-62	93.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G239330 PE=4 SV=1	[more]
A0A059BMY0_EUCGR	5.9e-58	89.68	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01156 PE=4 SV=1	[more]
A0A0D2UJ24_GOSRA	8.5e-57	86.05	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G103900 PE=4 SV=1	[more]
W9SCK4_9ROSA	1.1e-56	88.19	Uncharacterized protein OS=Morus notabilis GN=L484_011881 PE=4 SV=1	[more]

BLAST of Lsi05G001040 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22000.1	3.9e-53	77.34	unknown protein	[more]

BLAST of Lsi05G001040 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659133630\|ref\|XP_008466828.1\|	2.5e-62	94.62	PREDICTED: uncharacterized protein LOC103504139 [Cucumis melo]	[more]
gi\|449456975\|ref\|XP_004146224.1\|	7.4e-62	93.85	PREDICTED: uncharacterized protein LOC101216182 [Cucumis sativus]	[more]
gi\|1009123271\|ref\|XP_015878452.1\|	7.6e-59	90.55	PREDICTED: uncharacterized protein LOC107414780 [Ziziphus jujuba]	[more]
gi\|629101915\|gb\|KCW67384.1\|	8.4e-58	89.68	hypothetical protein EUGRSUZ_F01156 [Eucalyptus grandis]	[more]
gi\|702365136\|ref\|XP_010060601.1\|	8.4e-58	89.68	PREDICTED: uncharacterized protein LOC104448472 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006306	DNA methylation
biological_process	GO:0031047	gene silencing by RNA
biological_process	GO:0044710	single-organism metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001040.1	Lsi05G001040.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 113..130 scor
None	No IPR available	PANTHER	PTHR36781	FAMILY NOT NAMED	coord: 2..130 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G001040	Csa3G239330	Cucumber (Chinese Long) v2	culsiB211
Lsi05G001040	CSPI03G19800	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G001040	Cucsa.032160	Cucumber (Gy14) v1	cgylsiB003
Lsi05G001040	CmaCh16G000450	Cucurbita maxima (Rimu)	cmalsiB318
Lsi05G001040	CmoCh16G000540	Cucurbita moschata (Rifu)	cmolsiB307
Lsi05G001040	Cla004258	Watermelon (97103) v1	lsiwmB361
Lsi05G001040	MELO3C008496	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G001040	ClCG05G008950	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G001040	MELO3C008496.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G001040	Cla97C05G091250	Watermelon (97103) v2	lsiwmbB329
Lsi05G001040	Cp4.1LG14g06880	Cucurbita pepo (Zucchini)	cpelsiB178
Lsi05G001040	CsGy3G019700	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G001040	Carg15061	Silver-seed gourd	carlsiB904
Lsi05G001040	CsaV3_3G019840	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G001040	Wax gourd	lsiwgoB418
Lsi05G001040	Wax gourd	lsiwgoB431
Lsi05G001040	Wax gourd	lsiwgoB442
Lsi05G001040	Bottle gourd (USVL1VR-Ls)	lsilsiB013
Lsi05G001040	Bottle gourd (USVL1VR-Ls)	lsilsiB158
Lsi05G001040	Cucumber (Gy14) v1	cgylsiB348
Lsi05G001040	Cucurbita maxima (Rimu)	cmalsiB289
Lsi05G001040	Cucurbita maxima (Rimu)	cmalsiB385
Lsi05G001040	Cucurbita maxima (Rimu)	cmalsiB388
Lsi05G001040	Cucurbita maxima (Rimu)	cmalsiB584
Lsi05G001040	Cucurbita moschata (Rifu)	cmolsiB278
Lsi05G001040	Cucurbita moschata (Rifu)	cmolsiB373
Lsi05G001040	Cucurbita moschata (Rifu)	cmolsiB370
Lsi05G001040	Cucurbita moschata (Rifu)	cmolsiB559
Lsi05G001040	Cucurbita pepo (Zucchini)	cpelsiB036
Lsi05G001040	Cucurbita pepo (Zucchini)	cpelsiB037
Lsi05G001040	Cucurbita pepo (Zucchini)	cpelsiB154
Lsi05G001040	Cucurbita pepo (Zucchini)	cpelsiB622
Lsi05G001040	Wild cucumber (PI 183967)	cpilsiB381
Lsi05G001040	Cucumber (Chinese Long) v2	culsiB379
Lsi05G001040	Melon (DHL92) v3.5.1	lsimeB337
Lsi05G001040	Watermelon (Charleston Gray)	lsiwcgB324
Lsi05G001040	Watermelon (Charleston Gray)	lsiwcgB342
Lsi05G001040	Watermelon (97103) v1	lsiwmB372
Lsi05G001040	Watermelon (97103) v1	lsiwmB376
Lsi05G001040	Cucumber (Gy14) v2	cgyblsiB343
Lsi05G001040	Melon (DHL92) v3.6.1	lsimedB352
Lsi05G001040	Silver-seed gourd	carlsiB460
Lsi05G001040	Silver-seed gourd	carlsiB488
Lsi05G001040	Silver-seed gourd	carlsiB490
Lsi05G001040	Cucumber (Chinese Long) v3	cuclsiB401
Lsi05G001040	Watermelon (97103) v2	lsiwmbB318
Lsi05G001040	Watermelon (97103) v2	lsiwmbB339