Csa3G213500 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G213500
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Kinetochore protein NDC80-like protein; contains IPR005550 (Kinetochore protein Ndc80)
Location	Chr3 : 14280990 .. 14285647 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGGCAAGTTCCATAACAATAACATTTCCCTCCCTTTAGTCCTTTTACCAATACCATCTCTCAAATTGAAATTTTTGAAAACGAAACGAAGTACCCGCCGGAGACAAATATGAAGGGTACAGCCCGCCGCCGTCCAAAGGCGTCTTTCAATCCTCCGCCACCCCCTACTCCCCAATTCCGCCGCGATTCCGATGTCAGCTTTGCCAGTAGCCGCCCTTCTTCCATCGGAATGTCTCGTCCCTCCTCCGCTTCCATCGACATGTACAAAGAACGAGCCGTTCAAATTTCCACTGTCAACACCATCAACTCCTCTCTCAAGGAGCTCTTTTCTCACTCCTTTAACGTAACATTCAAACCCTTCTCTCCCCCTTCCCTCAAAGATCTTACTGAAACGATTAATTTGCTTCTTCAATGTCTCGATTATCCTCCCACTAAGCTTGAGGATGATCTCCCCATCCTTCTCAAATCCCTTGGGTATCCCTTCAAAATTAACAAGAACATCCTCAAGAATCCCCCTGCTCCTCATCAGTGGTACCAAATTCTTGCCCTACTTCACTGGCTTGTTCAGGTTGCTCTTTATAACTATAACCTAGCAAATGATTCCAATCCCATTTTTACGGGTCACGATGTGAATATATATGTGTTGAATAGCTATTTGCATTATATGCGTGGGGATGATGATTCGGTTGAGGCTTTAGATCAGGAGTTTATGGAGAGGTTGAAGAAAACGAGGGATGATTCACGTGAAAGCTTGAAGGAACTGGAGGAGGAAGTTAAGGTGCTCGAAGCCAAGGTCGAGGCCTTGCGGTCAGATCCCTCGCAGAGGGAGGTTCTTGAGAAGCAGCAGAGTTTGCTTGAAGAGGATGTGAAGAAGTTCCATACCATGATCGCGGGCTACAGTGAGAAGATGCAGGAAATGAAGAAACTTTTGGAGGAAAAGGAAAAGGAGTTGGACGTTAAAATGGAGGAGAGAAATAAGATTTGTGAAGAGAATGAAGAACTGAAGAAGAGGGTGGAGTCTCAATTGTTTAATCCTAGAGATGTGGAAAGGATGAGAAGAGAATTGCAGGCTGTGGAGAGGGACATTGGTGATGCCGAAGTCTCGAGGAACTCGTGGGAGGAGAAGTCATGGGATCTTGATGCAACTCTAGGAAATAAATTTAAGGAGCTTGAGGCCATTGCAATGGAATGTAACCAGGCGATGAGAAGGTTGCTCCTCCTTCACTTTTCTTTATTTGTTGTTATTATCATTTAGTTCTTGTTTTCAAATATCTCAAACTTAATACTTCCGTCCTATAGAACCAAGTTTAAGTTTATTTCCATTACTTCTAGTTCGTTCTCTTGAAATCGTTCTTGACAAGAATCTTATCAATTGAGAAGAAGTTTTAAATGTATTGATTTATTTGGGGTATCTGCCATCAAGTTTCAACCTTTCCTTTTAATGTTTTCAGCCTACTATACTATGAGAACATTTTTAAAATCTAATGTTCATAGCTATGGTATATCACCTCCATAGTCTTCTACATATTCAGGGGAAAGTATGTGGTCCAGCATTGTAAAGATACTAGAAATATTGGTCATCCCAAATCATACTTATCATTTATATTGATAAATTGAAATTTTAAAACATACTATTGGTAAAATTGAACTACTGTGAAGTTTGTTGAATCTTTCTACATTCACGATTCAAATGTTTTCATCTAGTTAATTAAGGTATTGTATCCAACATTTACTTAATCTGATTTTTTTCGAATTATAGTTATTGCTTTGCAAGAATGTAGTTTTTGTAGTTTCTTGATTTGGTTGTTAGTAATGCATTTCTTCTCCTCTTATTTTATTTTTGTGAATTTCACATCTTATGGTACTTATTCATCTCAAACGATACCTATGAGTATAAAGGGTTATTCAATAACAAAATTCAATAGCCCCTTATACTAATGGGAACCTTTTTCTTACCAACTCAGCATATTTACTTTGTTAATACAACTTCTATTTGTTGTTATTAGATTAAAGCTCGATAGTTGTCATCAGTATGTCCTGAATGCAAAGGGGTCGACACCAGCTGATGTGATGGGGATTGACTATAAGACAACGCTTAAGCCTGCACTTGATTCCTTTGCAGAGGACATAAGGAGAAGTTCTATGATGAAGTTGGAAGAGTTGATTTCTCTTAGGCAGCAATCAAGTGAAAATACTGCTAAAATTGAGTCTAAACGCGACCACATAGCTTCCCTTCAATCCCATGTTAATGAAGTAAGGACATGACAAAATAAATGAGGGGTTTGCTTGGCTGGTAGGAATTAACTCGTACAAGATGTTTTGCTGACCGCTTAAATGGTTTCTTTCTTCCAGCATGAAACACAACTAATCTCCTTAAAAGATGAAATGAGAGATTATATTTTAAGATGCTCCACGGAATCTAAGAAGATGGTGGAGGATGTTCAACAAGAAGCTCATAACTTAGATCTCGTGGAAGGAGAAGCAGAGGAGAGTTTGAAGGTATTAGTGCTTTACCACAATTATTCCCTTTATTTATTATTATTATTATTGGGTGAGGGGGAGTTGACCTCCCTTTTCCCCTTTCTTTTGGTAACCCTGATGATCAGTTGGCTTTGTAGAGGACTATTATTTCTGTGGGTAAATAACACTGTTAGCCCTTGAATTTCAAATTAATAAGTTTCTATTCGATCCCTTGCAGATATTTTTAGTCTATGCCTTTAAGAAATGGTACTAAACTTAGTTGAATATTTGAATGATGATTTGGCAGGTAATATAATTTTTCAAATGAGTTGGATTTTTTTTAGCTTACATGGCATTTAAATCTCTTTCTTTCCCTACCCTTCTTCCTCATTTGCTCCCTCTCCTTTTATCTGAGTGCAAAAATTCATTCACCTTCCTTCATTAAAAAAATATATTGTCTTTGCCCAAACCTCTCACTCTTTCTTCTCCCAAAGCTTTCAACCAACAACACTTCATATAAGAAAATAAGTTATATAAAACTCTGAACATTGCACGCCTAACATTTGTGCAAGTGAGTGAAGAAAGGATGCATGCACATGAGTGTGAAGAATCCATGTGTGAGAGAGACATATAGAGTTGAGATAAATTTAAGAGTTGAGTGTGATATCGATAAATGAGAAAGTCAAGTGTGACTTTTTGTATTATGTCAATGCAAGTTGTGAATGAGAGAAGGATTTTGAGTTTAGGTTTTAAGAAGAGGATTGAGGAATAAGAATAACTAGTACTCATATGGAATGTTATCCGTCCATTATTTTGAGCTCGCCACTGCTGCTCCTTTTGTACCGATGAGATACATTGACCTTTGATTGGCTCCATGATCTCATACTTATCCTTCCAGATAAAATGTTATCCTCTTTGAAATCAATCCAATGCTAGCAGTGGCATACTTACTAGAAGAGGAGAAAAGAAGGAATAACAAGGGTAGGGAAAAAAAAGAGAAAATCATGTCTACAAATCTAGTCAGCAAGTTAACTGTCAAATCATCATTTAGTTAGTTAACTAACAGTCCAAGGATCTTCTAGAACAATTTCTTGGAGGGATGGGACTAGAATGTTAGTTGTTGAAACTTAAGGGACCAAACAAAATTCTATTCTCATATTTAGAGGCAATGAGAATAAAGATTGATTGATAACTTCAATTCCGTTAGAAGTTAGATAACCATTTGGTTTTTGCTCCTTGAGAACTAAATTTAACACAATTCTACCAATTCGATTTTTTATTTTGTTGTCTACTTTTTAAGAGTGTTTTCAAAAATTCAAGTCAAGTTTTGAAAACTGAAAAAAGTAGTTTCTAAAATGTTATTTTTGTTTTTGGCATTTGGCTAAGAGTACAAATGTTTATCTTGAAGGCATGAAAACTATGATTAAGAAATTGTAAAAACCAAGTACAATTTAAAAACTAAAAACCAAATGCATGTTTGAAGTTTAAATTTCTTTCTAGATTTTGGAAGAATTTTAGATGGACTGGTAATCAATCTTTTGTTAACACAACCAAGTCAGTTTTCTTGAAGATTTCTGTAGGCATTGCACCATATCATTGTATCTTGTCTTGCACCTAAACTAGGAGAGAAATCACTTTAACTATATTAACTGTTACAACACTTTCTACCACCTCAGTTTCGCTTAGTTAATTTATAGTTGATGCTAAAATCTCCTCTCTTATTGTGATCTGTTGTTGGTTCTGTGAAGAATGCCAAATTGGCGCATCAGGAAGCAATAAAGCAAGGAGAAGAAGAAATTCATATGTGTGCTCGTGAACTACTTTCATGTCTTGACTCTGTCTCACAATATAAAGCAGTTGTTAGCTGCAAAATTTCAGATATGGAAAGCTGCCTCTCGAAGGCTGCTGCCGGTATCTCTGAGGCTTTCAAGAATTCTATGCCTGCAGAATAAGGTACGCTATAGCTTTCGTTAAAAGTTTGTTTTCCATAATTCACTTTATGAATTTCAAAGAATGAATTCTAACGAAAGTTCGAATTCTATATGGAGAACAAGATTGGTCCTTGGTGATGTTCCATGTTTCATTTTAGGCTTTGACATCAAAGATCTTTTGTAATTACTCTTTGGGCAATAACTTTCTTAGTTGGCCCCCTTTTTATATGCCATGTATTTCTTCCTTCTTTCTCAATGAAAGCGC

mRNA sequence

ATGAAGGGTACAGCCCGCCGCCGTCCAAAGGCGTCTTTCAATCCTCCGCCACCCCCTACTCCCCAATTCCGCCGCGATTCCGATGTCAGCTTTGCCAGTAGCCGCCCTTCTTCCATCGGAATGTCTCGTCCCTCCTCCGCTTCCATCGACATGTACAAAGAACGAGCCGTTCAAATTTCCACTGTCAACACCATCAACTCCTCTCTCAAGGAGCTCTTTTCTCACTCCTTTAACGTAACATTCAAACCCTTCTCTCCCCCTTCCCTCAAAGATCTTACTGAAACGATTAATTTGCTTCTTCAATGTCTCGATTATCCTCCCACTAAGCTTGAGGATGATCTCCCCATCCTTCTCAAATCCCTTGGGTATCCCTTCAAAATTAACAAGAACATCCTCAAGAATCCCCCTGCTCCTCATCAGTGGTACCAAATTCTTGCCCTACTTCACTGGCTTGTTCAGGTTGCTCTTTATAACTATAACCTAGCAAATGATTCCAATCCCATTTTTACGGGTCACGATGTGAATATATATGTGTTGAATAGCTATTTGCATTATATGCGTGGGGATGATGATTCGGTTGAGGCTTTAGATCAGGAGTTTATGGAGAGGTTGAAGAAAACGAGGGATGATTCACGTGAAAGCTTGAAGGAACTGGAGGAGGAAGTTAAGGTGCTCGAAGCCAAGGTCGAGGCCTTGCGATGCTCCACGGAATCTAAGAAGATGGTGGAGGATGTTCAACAAGAAGCTCATAACTTAGATCTCGTGGAAGGAGAAGCAGAGGAGAGTTTGAAGAATGCCAAATTGGCGCATCAGGAAGCAATAAAGCAAGGAGAAGAAGAAATTCATATGTGTGCTCGTGAACTACTTTCATGTCTTGACTCTGTCTCACAATATAAAGCAGTTGTTAGCTGCAAAATTTCAGATATGGAAAGCTGCCTCTCGAAGGCTGCTGCCGGTATCTCTGAGGCTTTCAAGAATTCTATGCCTGCAGAATAA

Coding sequence (CDS)

ATGAAGGGTACAGCCCGCCGCCGTCCAAAGGCGTCTTTCAATCCTCCGCCACCCCCTACTCCCCAATTCCGCCGCGATTCCGATGTCAGCTTTGCCAGTAGCCGCCCTTCTTCCATCGGAATGTCTCGTCCCTCCTCCGCTTCCATCGACATGTACAAAGAACGAGCCGTTCAAATTTCCACTGTCAACACCATCAACTCCTCTCTCAAGGAGCTCTTTTCTCACTCCTTTAACGTAACATTCAAACCCTTCTCTCCCCCTTCCCTCAAAGATCTTACTGAAACGATTAATTTGCTTCTTCAATGTCTCGATTATCCTCCCACTAAGCTTGAGGATGATCTCCCCATCCTTCTCAAATCCCTTGGGTATCCCTTCAAAATTAACAAGAACATCCTCAAGAATCCCCCTGCTCCTCATCAGTGGTACCAAATTCTTGCCCTACTTCACTGGCTTGTTCAGGTTGCTCTTTATAACTATAACCTAGCAAATGATTCCAATCCCATTTTTACGGGTCACGATGTGAATATATATGTGTTGAATAGCTATTTGCATTATATGCGTGGGGATGATGATTCGGTTGAGGCTTTAGATCAGGAGTTTATGGAGAGGTTGAAGAAAACGAGGGATGATTCACGTGAAAGCTTGAAGGAACTGGAGGAGGAAGTTAAGGTGCTCGAAGCCAAGGTCGAGGCCTTGCGATGCTCCACGGAATCTAAGAAGATGGTGGAGGATGTTCAACAAGAAGCTCATAACTTAGATCTCGTGGAAGGAGAAGCAGAGGAGAGTTTGAAGAATGCCAAATTGGCGCATCAGGAAGCAATAAAGCAAGGAGAAGAAGAAATTCATATGTGTGCTCGTGAACTACTTTCATGTCTTGACTCTGTCTCACAATATAAAGCAGTTGTTAGCTGCAAAATTTCAGATATGGAAAGCTGCCTCTCGAAGGCTGCTGCCGGTATCTCTGAGGCTTTCAAGAATTCTATGCCTGCAGAATAA

Protein sequence

MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQISTVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKAVVSCKISDMESCLSKAAAGISEAFKNSMPAE*

Homology

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BLAST of Csa3G213500 vs. Swiss-Prot
Match: NDC80_CHICK (Kinetochore protein NDC80 homolog OS=Gallus gallus GN=NDC80 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 7.3e-13
Identity = 67/241 (27.80%), Postives = 99/241 (41.08%), Query Frame = 1


Query: 29  VSFASSRPSSIGMSRPSSASIDMYKERAVQ----ISTVNTINSSLKELFS------HSFN 88
           VSF   R S  G SR S     M+    ++    +     I   +K+L        ++ N
Sbjct: 57  VSFFGKRASGAGGSRNSQYG--MFGTEKIKDPRPLHDKAFIQQCIKQLCEFLVENGYAHN 116

Query: 89  VTFKPFSPPSLKDLTETINLLLQCL----DYPPTKLEDDLPILLKSLGYPFKINKNILKN 148
           VT K    PS+KD  +    +   L    + P +K E+++P + K LGYPF ++K+ +  
Sbjct: 117 VTIKSLQSPSVKDFIKIFTFIYGFLCPSYELPDSKFEEEIPRVFKELGYPFPLSKSSMYT 176

Query: 149 PPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVN----------------IYV 208
             APH W QI+A L WL     +    A   NP       N                 YV
Sbjct: 177 VGAPHTWPQIVAALIWLTD--CFKLYAAMRENPSSFDDGQNWGGETDDGIVHNKLFMDYV 236

Query: 209 LNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCSTES 240
           +  Y H+M+G  D+ E LD E   +LK   +     ++ L  E K L  ++  L    ES
Sbjct: 237 VKCYEHFMKG-GDTYEELDAEVQSKLKDLFNVDEFKIEGLAAENKRLHEEIARLEKERES 292

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BLAST of Csa3G213500 vs. Swiss-Prot
Match: NDC80_XENTR (Kinetochore protein NDC80 homolog OS=Xenopus tropicalis GN=ndc80 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 3.6e-12
Identity = 54/183 (29.51%), Postives = 85/183 (46.45%), Query Frame = 1


Query: 75  HSFNVTFKPFSPPSLKDLTETINLLLQ--CLDY--PPTKLEDDLPILLKSLGYPFKINKN 134
           +S  +T K    PS KD  +    +    C +Y  P +K E+++P + K LGYPF ++K+
Sbjct: 107 YSQTLTVKSLQGPSTKDFLKIFAFIYTFICPNYENPESKFEEEIPRIFKELGYPFALSKS 166

Query: 135 ILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIF----------TGHDVN----I 194
            +    APH W QI+A L WL+        L ++ NP+F           G D N     
Sbjct: 167 SMYTVGAPHTWPQIVAALVWLIDCVKLCCVLRSE-NPVFEEPQMGEQSENGIDFNQLFLD 226

Query: 195 YVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCST 240
           Y +  Y  +M G  D+ E  D +   RLK+       +L+ L++E + L  ++E L    
Sbjct: 227 YTVRCYDQFMEG-RDTFEEYDADMCIRLKEAYHVDESNLEALQQESRRLLEEIERLEKEK 286

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BLAST of Csa3G213500 vs. Swiss-Prot
Match: NDC80_XENLA (Kinetochore protein NDC80 homolog OS=Xenopus laevis GN=ndc80 PE=1 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 6.1e-12
Identity = 54/183 (29.51%), Postives = 85/183 (46.45%), Query Frame = 1


Query: 75  HSFNVTFKPFSPPSLKDLTETINLLLQ--CLDY--PPTKLEDDLPILLKSLGYPFKINKN 134
           +S  +T K    PS KD  +    +    C +Y  P +K E+++P + K LGYPF ++K+
Sbjct: 107 YSQALTVKSLQGPSTKDFLKIFAFIYTFICPNYENPESKFEEEIPRIFKELGYPFALSKS 166

Query: 135 ILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIF----------TGHDVN----I 194
            +    APH W QI+A L WL+        L ++ NP+F           G D N     
Sbjct: 167 SMYTVGAPHTWPQIVAALVWLIDCVKLCCVLRSE-NPVFEDPPMGEQSENGIDFNQLFLD 226

Query: 195 YVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCST 240
           Y +  Y  +M G  D+ E  D +   RLK+       +L+ L++E + L  ++E L    
Sbjct: 227 YTVRCYDQFMEG-RDTFEEYDTDVCIRLKEAYHVDESNLEALQQESRRLMEEIERLEKEK 286

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BLAST of Csa3G213500 vs. Swiss-Prot
Match: NDC80_HUMAN (Kinetochore protein NDC80 homolog OS=Homo sapiens GN=NDC80 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-11
Identity = 49/184 (26.63%), Postives = 82/184 (44.57%), Query Frame = 1


Query: 75  HSFNVTFKPFSPPSLKDLTETINLLLQCL----DYPPTKLEDDLPILLKSLGYPFKINKN 134
           ++ NV+ K    PS+KD  +    L   L    + P TK E+++P + K LGYPF ++K+
Sbjct: 108 YAHNVSMKSLQAPSVKDFLKIFTFLYGFLCPSYELPDTKFEEEVPRIFKDLGYPFALSKS 167

Query: 135 ILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFT-----GHDVN---------- 194
            +    APH W  I+A L WL+   +  +    +S+P+F      G +            
Sbjct: 168 SMYTVGAPHTWPHIVAALVWLID-CIKIHTAMKESSPLFDDGQPWGEETEDGIMHNKLFL 227

Query: 195 IYVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCS 240
            Y +  Y  +M G  DS + ++ E   +LK   +     L+ LE + + L  ++  L   
Sbjct: 228 DYTIKCYESFMSG-ADSFDEMNAELQSKLKDLFNVDAFKLESLEAKNRALNEQIARLEQE 287

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BLAST of Csa3G213500 vs. Swiss-Prot
Match: NDC80_MACFA (Kinetochore protein NDC80 homolog OS=Macaca fascicularis GN=NDC80 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-11
Identity = 49/184 (26.63%), Postives = 82/184 (44.57%), Query Frame = 1


Query: 75  HSFNVTFKPFSPPSLKDLTETINLLLQCL----DYPPTKLEDDLPILLKSLGYPFKINKN 134
           ++ NV+ K    PS+KD  +    L   L    + P TK E+++P + K LGYPF ++K+
Sbjct: 108 YAHNVSMKSLQAPSVKDFLKIFTFLYGFLCPSYELPDTKFEEEVPRIFKDLGYPFALSKS 167

Query: 135 ILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFT-----GHDVN---------- 194
            +    APH W  I+A L WL+   +  +    +S+P+F      G +            
Sbjct: 168 SMYTVGAPHTWPHIVAALVWLID-CIKIHTAMKESSPLFDDGQPWGEETEDGIMHNKLFL 227

Query: 195 IYVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCS 240
            Y +  Y  +M G  DS + ++ E   +LK   +     L+ LE + + L  ++  L   
Sbjct: 228 DYTIKCYESFMSG-ADSFDEMNAELQSKLKDLFNVDAFKLESLEAKNRALNEQIARLEQE 287

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BLAST of Csa3G213500 vs. TrEMBL
Match: A0A0A0L740_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G213500 PE=4 SV=1)

HSP 1 Score: 660.6 bits (1703), Expect = 1.0e-186
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 1


Query: 1   MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS 60
           MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS
Sbjct: 1   MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
           TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN 180
           LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN
Sbjct: 121 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN 180

Query: 181 SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCSTESKK 240
           SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCSTESKK
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCSTESKK 240

Query: 241 MVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKA 300
           MVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKA
Sbjct: 241 MVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKA 300

Query: 301 VVSCKISDMESCLSKAAAGISEAFKNSMPAE 332
           VVSCKISDMESCLSKAAAGISEAFKNSMPAE
Sbjct: 301 VVSCKISDMESCLSKAAAGISEAFKNSMPAE 331

[Close]

BLAST of Csa3G213500 vs. TrEMBL
Match: F6H969_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g00950 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.0e-58
Identity = 127/252 (50.40%), Postives = 169/252 (67.06%), Query Frame = 1


Query: 1   MKGTARRRPKASFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPSSASIDMYKE 60
           MK T RRRPK S  PPPPP P      QF RDSD SFASSRPSS+G++R S+   D   +
Sbjct: 1   MKATGRRRPKDSIRPPPPPAPSVDHHRQFSRDSDASFASSRPSSLGINRSSAG--DALTD 60

Query: 61  RAVQISTVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDL 120
           R+ Q+S + TINS L    SHS  ++ KP   PS KD++ET+  L+  LD+P TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 120

Query: 121 PILLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDV 180
           PILLK L  P K+NK+ LK P  PH W  +L ++HWLVQ+ALYN +L ++   +    + 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHAWPPLLGVMHWLVQIALYNDHLVSN---LQCFDNT 180

Query: 181 NIYVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRC 240
            +Y L+SYLHY+RGDDD +EA+D+EFM +L+K RD   E +K LE+EV   E ++E LR 
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLEKERDAVAEGVKALEKEVAEREGRLEELRS 240

Query: 241 STESKKMVEDVQ 247
              +K++VE V+
Sbjct: 241 GPSAKEVVEKVR 243

[Close]

BLAST of Csa3G213500 vs. TrEMBL
Match: F6H969_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g00950 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.3e-20
Identity = 61/146 (41.78%), Postives = 93/146 (63.70%), Query Frame = 1


Query: 195 ALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEAL---------RCSTESKKMVEDV 254
           +L Q+ +E   K  +  R  L  L+     +EA++  L         RC+ E+KK+VEDV
Sbjct: 418 SLQQQSVENAAKI-EAKRNRLAALQSRSDEVEAQLNFLKKETQNYTSRCAMEAKKLVEDV 477

Query: 255 QQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKAVVSCK 314
           + E HN+D+VE E  + L+ +KL  QEAIKQ EEEI +CA EL + +DSVS+YK  ++ K
Sbjct: 478 EIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQICAWELYALVDSVSKYKEHMASK 537

Query: 315 ISDMESCLSKAAAGISEAFKNSMPAE 332
           IS+M+S LS+ A  +S+++K S+ A+
Sbjct: 538 ISEMKSNLSETAGAVSDSYKGSLSAQ 562

HSP 2 Score: 232.3 bits (591), Expect = 8.8e-58
Identity = 125/249 (50.20%), Postives = 166/249 (66.67%), Query Frame = 1


Query: 1   MKGTARRRPKASFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPSSASIDMYKE 60
           MK T RRRPK SF PPPPP P      Q  RDSD SFA SRPSS+G+SR S+   D   +
Sbjct: 215 MKATGRRRPKDSFRPPPPPPPSVDHHRQLSRDSDASFAGSRPSSLGISRSSAG--DALTD 274

Query: 61  RAVQISTVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDL 120
           R+ Q+S + TINS L    SHS  ++ KP   PS KD++ET+  L+  LD+P TKLEDDL
Sbjct: 275 RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 334

Query: 121 PILLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDV 180
           PILLK L  P K+NK+ LK P  PH W  +L ++HWLVQ+ALYN +L ++   +    + 
Sbjct: 335 PILLKHLNCPIKLNKSALKAPGTPHAWPSLLGVMHWLVQIALYNDHLVSN---LQCFDNT 394

Query: 181 NIYVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRC 240
            +Y L+SYLHY+RGDDD +EA+D+EFM +L++ RD   E +K LE+EV   E ++E LR 
Sbjct: 395 FVYALDSYLHYIRGDDDGMEAVDREFMGKLERERDAVAEGVKALEKEVAEREGRLEELRL 454

Query: 241 STESKKMVE 244
              +K++VE
Sbjct: 455 GPSAKEVVE 454

[Close]

BLAST of Csa3G213500 vs. TrEMBL
Match: F6I2P0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00940 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.3e-20
Identity = 62/146 (42.47%), Postives = 93/146 (63.70%), Query Frame = 1


Query: 195 ALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEAL---------RCSTESKKMVEDV 254
           +L Q+ +E   K  +  R  L  L+     +EA++  L         RC+TE+KK+VEDV
Sbjct: 632 SLQQQSVENAAKI-EAKRNRLAALQSSSDEVEAQLIFLKKESQNYTSRCATEAKKLVEDV 691

Query: 255 QQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKAVVSCK 314
           + E HN+D+VE E  + L+ +KL  QEAIKQ EEEI MCA EL + +DSVS+YK  ++ K
Sbjct: 692 EIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQMCAWELYALVDSVSKYKEHMASK 751

Query: 315 ISDMESCLSKAAAGISEAFKNSMPAE 332
           IS+M+  LS+ A  +S+++K S+ A+
Sbjct: 752 ISEMKCNLSETAGAVSDSYKGSLLAQ 776

HSP 2 Score: 231.5 bits (589), Expect = 1.5e-57
Identity = 125/249 (50.20%), Postives = 166/249 (66.67%), Query Frame = 1


Query: 1   MKGTARRRPKASFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPSSASIDMYKE 60
           MK T RRRPK S  PPPPP P      QF RDSD SFASSRPSS+G++R S+   D   +
Sbjct: 1   MKATGRRRPKDSIRPPPPPAPSVDHHRQFSRDSDASFASSRPSSLGINRSSAG--DALTD 60

Query: 61  RAVQISTVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDL 120
           R+ Q+S + TINS L    SHS  ++ KP   PS KD++ET+  L+  LD+P TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 120

Query: 121 PILLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDV 180
           PILLK L  P K+NK+ LK P  PH W  +L ++HWLVQ+ALYN +L ++   +    + 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHAWPPLLGVMHWLVQIALYNDHLVSN---LQCFDNT 180

Query: 181 NIYVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRC 240
            +Y L+SYLHY+RGDDD +EA+D+EFM +L+  RD   E +K LE+EV   E ++E LR 
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLEXERDAVAEGVKALEKEVAEREGRLEELRS 240

Query: 241 STESKKMVE 244
              +K++VE
Sbjct: 241 GPSAKEVVE 240

[Close]

BLAST of Csa3G213500 vs. TrEMBL
Match: A5AI77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035303 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 6.2e-19
Identity = 61/146 (41.78%), Postives = 91/146 (62.33%), Query Frame = 1


Query: 195 ALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEAL---------RCSTESKKMVEDV 254
           +L Q+ +E   K  +  R  L  L+     +EA++  L         RC+TE+KK+VEDV
Sbjct: 418 SLQQQSVENAAKI-EAKRNRLAALQSXSDEVEAQLIFLKKESQNYTSRCATEAKKLVEDV 477

Query: 255 QQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKAVVSCK 314
           + E HN+D VE E  + L+ +KL  QEAIKQ EEEI  CA EL + +DSVS+YK  ++ K
Sbjct: 478 EIETHNVDXVEREVADVLETSKLKLQEAIKQNEEEIQXCAWELYALVDSVSKYKEHMASK 537

Query: 315 ISDMESCLSKAAAGISEAFKNSMPAE 332
           IS+M+  LS+ A  +S+++K S+ A+
Sbjct: 538 ISEMKCNLSETAGAVSDSYKGSLLAQ 562

HSP 2 Score: 228.4 bits (581), Expect = 1.3e-56
Identity = 123/249 (49.40%), Postives = 166/249 (66.67%), Query Frame = 1


Query: 1   MKGTARRRPKASFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPSSASIDMYKE 60
           MK T RRRPK S  PPPPP P      QF R+SD SFASSRPSS+G++R S+   D   +
Sbjct: 1   MKATGRRRPKDSIRPPPPPPPSVDHHRQFSRNSDASFASSRPSSLGINRSSAG--DALTD 60

Query: 61  RAVQISTVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDL 120
           R+ Q+S + TINS L    SHS  +  KP   PS KD++ET+  L+  LD+P TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLPLKP-PLPSAKDISETLKFLISELDFPTTKLEDDL 120

Query: 121 PILLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDV 180
           PILLK L  P K+NK+ LK P  PH W  +L ++HWLVQ+ALYN +L ++   +    + 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHSWPSLLGVMHWLVQIALYNDHLMSN---LECFDNT 180

Query: 181 NIYVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRC 240
            +Y L+SYLHY+RGDDD +EA+D+EFM +L++ RD   E +K LE+EV   E ++E LR 
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLERERDAVAEGVKALEKEVTEREGRLEELRS 240

Query: 241 STESKKMVE 244
              +K+++E
Sbjct: 241 GPSAKEVME 240

[Close]

BLAST of Csa3G213500 vs. TAIR10
Match: AT3G54630.1 (AT3G54630.1 Kinetochore protein Ndc80 (InterPro:IPR005550))

HSP 1 Score: 161.4 bits (407), Expect = 9.7e-40
Identity = 94/264 (35.61%), Postives = 146/264 (55.30%), Query Frame = 1


Query: 1   MKGTA--RRRPKASFN-PPPPPTPQFR--------RDSDVSFASSRPSSIGMSRPSSASI 60
           M+G A  +RR    F   PPPP P           RDSD SFASSRPSSIG+    ++  
Sbjct: 1   MRGGAAGKRRTTVGFGGAPPPPPPSIEQQRHLFNSRDSDASFASSRPSSIGLGGRGASD- 60

Query: 61  DMYKERAVQISTVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYP--P 120
               +R+  I  +N        L +H+F ++ +    PS+KD++ET+  LL  LDYP   
Sbjct: 61  ----DRSSMIRFINAF------LSTHNFPISIRGNPVPSVKDISETLKFLLSALDYPCDS 120

Query: 121 TKLEDDLPILLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNP 180
            K ++DL   LKS   PFKI K+ LK P  PH W  +LA++HWL ++A ++ +L ++S  
Sbjct: 121 IKWDEDLVFFLKSQKCPFKITKSSLKAPNTPHNWPTVLAVVHWLAELARFHQHLVSNSTS 180

Query: 181 IFTGHDVNIYVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEA 240
           +   + +N + + S+ H++RG+DD V  LD +F+ +L+  +    E++   E+    LEA
Sbjct: 181 VPEDNSMNFFAIQSFGHFIRGEDDKVNDLDSQFLGKLEAEKTSVAETISGCEKISGELEA 240

Query: 241 KVEALRCSTESKKMVEDVQQEAHN 252
           K+E+LR     K+ +E V+ +  N
Sbjct: 241 KLESLRKGPSKKESLEKVKADLEN 253

HSP 2 Score: 89.0 bits (219), Expect = 6.1e-18
Identity = 43/113 (38.05%), Postives = 77/113 (68.14%), Query Frame = 1


Query: 215 LKELEEEVKVLEAKVEAL--RCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQE 274
           + +LEE++K+++ + + L  +C  E+K +VE V+ EA NL++VE EA E +K ++L  QE
Sbjct: 447 INDLEEKMKLVKKETQELSTKCDLEAKTLVESVKAEALNLEVVEKEAAEFVKASELRLQE 506

Query: 275 AIKQGEEEIHMCARELLSCLDSVSQYKAVVSCKISDMESCLSKAAAGISEAFK 326
           A+K+ EEE+  CA +L + +DS+S+ K  +  KIS++++ ++  A+ +SE +K
Sbjct: 507 AVKESEEEVQACAAQLFALIDSISKQKEYMDSKISEIKTGVADTASAVSEIYK 559

[Close]

BLAST of Csa3G213500 vs. NCBI nr
Match: gi|700202425|gb|KGN57558.1| (hypothetical protein Csa_3G213500 [Cucumis sativus])

HSP 1 Score: 660.6 bits (1703), Expect = 1.4e-186
Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 1


Query: 1   MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS 60
           MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS
Sbjct: 1   MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
           TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN 180
           LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN
Sbjct: 121 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN 180

Query: 181 SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCSTESKK 240
           SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCSTESKK
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCSTESKK 240

Query: 241 MVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKA 300
           MVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKA
Sbjct: 241 MVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKA 300

Query: 301 VVSCKISDMESCLSKAAAGISEAFKNSMPAE 332
           VVSCKISDMESCLSKAAAGISEAFKNSMPAE
Sbjct: 301 VVSCKISDMESCLSKAAAGISEAFKNSMPAE 331

[Close]

BLAST of Csa3G213500 vs. NCBI nr
Match: gi|778680142|ref|XP_004149971.2| (PREDICTED: kinetochore protein NDC80 homolog [Cucumis sativus])

HSP 1 Score: 475.3 bits (1222), Expect = 8.6e-131
Identity = 251/309 (81.23%), Postives = 266/309 (86.08%), Query Frame = 1


Query: 1   MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS 60
           MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS
Sbjct: 1   MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
           TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN 180
           LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN
Sbjct: 121 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN 180

Query: 181 SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCSTESKK 240
           SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALR S  S++
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALR-SDPSQR 240

Query: 241 MVEDVQQEAHNLD------LVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDS 300
            V + QQ     D      ++ G +E+  +  KL  +   K+ E ++ M  R  + C ++
Sbjct: 241 EVLEKQQSLLEEDVKKFHTMIAGYSEKMQEMKKLLEE---KEKELDVKMEERNKI-CEEN 300

Query: 301 VSQYKAVVS 304
               K V S
Sbjct: 301 EELKKRVES 304

[Close]

BLAST of Csa3G213500 vs. NCBI nr
Match: gi|778680142|ref|XP_004149971.2| (PREDICTED: kinetochore protein NDC80 homolog [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47
Identity = 104/117 (88.89%), Postives = 107/117 (91.45%), Query Frame = 1


Query: 219 EEEVKVLEAKVEA----LRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 278
           E E +++  K E     LRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI
Sbjct: 449 EHETQLISLKDEMRDYILRCSTESKKMVEDVQQEAHNLDLVEGEAEESLKNAKLAHQEAI 508

Query: 279 KQGEEEIHMCARELLSCLDSVSQYKAVVSCKISDMESCLSKAAAGISEAFKNSMPAE 332
           KQGEEEIHMCARELLSCLDSVSQYKAVVSCKISDMESCLSKAAAGISEAFKNSMPAE
Sbjct: 509 KQGEEEIHMCARELLSCLDSVSQYKAVVSCKISDMESCLSKAAAGISEAFKNSMPAE 565

HSP 2 Score: 464.9 bits (1195), Expect = 1.2e-127
Identity = 246/309 (79.61%), Postives = 261/309 (84.47%), Query Frame = 1


Query: 1   MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS 60
           MKGT RRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRP SASIDMYKERAVQIS
Sbjct: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPSASIDMYKERAVQIS 60

Query: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120
           TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 121 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN 180
           LGYPFKINKNILK PPAPHQWYQILALLHWLVQVALYNYNLANDSNP+F GHDVNIYVLN
Sbjct: 121 LGYPFKINKNILKTPPAPHQWYQILALLHWLVQVALYNYNLANDSNPVFMGHDVNIYVLN 180

Query: 181 SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRCSTESKK 240
           SYLHYMRGDDDSVEALDQEFMERLKKTRDDS ESLKELEEEVKVLEAKVEALR S  S++
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLKKTRDDSCESLKELEEEVKVLEAKVEALR-SDPSQR 240

Query: 241 MVEDVQQEAHNLD------LVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDS 300
            V + QQ     D      ++ G +E+  +  KL  +   K+ E E+ M  R  + C ++
Sbjct: 241 EVLEKQQSLLEEDVKKFHTMIAGYSEKMQEMKKLLEE---KEKELEVKMEERNKI-CEEN 300

Query: 301 VSQYKAVVS 304
               K V S
Sbjct: 301 EELKKRVES 304

[Close]

BLAST of Csa3G213500 vs. NCBI nr
Match: gi|659077518|ref|XP_008439248.1| (PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 5.5e-45
Identity = 107/146 (73.29%), Postives = 113/146 (77.40%), Query Frame = 1


Query: 195 ALDQEFMERLKKTRDDSRESLKEL-----EEEVKVLEAKVEA----LRCSTESKKMVEDV 254
           +L Q+  E   K  D  R  +  L     E E K++  K E     LRCSTESKKMVED 
Sbjct: 421 SLRQQSSENTAKI-DSKRNQIASLQSHINEHETKLISLKDEMRDYILRCSTESKKMVEDF 480

Query: 255 QQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKAVVSCK 314
           QQEAHNLDLVEGEAEESLKNAKLA+QEA KQ EEEIHMCARELLSCLDSVSQYKAVVSCK
Sbjct: 481 QQEAHNLDLVEGEAEESLKNAKLANQEATKQEEEEIHMCARELLSCLDSVSQYKAVVSCK 540

Query: 315 ISDMESCLSKAAAGISEAFKNSMPAE 332
           ISDMESCLSKAAAGISEAFKNSMP E
Sbjct: 541 ISDMESCLSKAAAGISEAFKNSMPVE 565

HSP 2 Score: 235.3 bits (599), Expect = 1.5e-58
Identity = 127/252 (50.40%), Postives = 169/252 (67.06%), Query Frame = 1


Query: 1   MKGTARRRPKASFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPSSASIDMYKE 60
           MK T RRRPK S  PPPPP P      QF RDSD SFASSRPSS+G++R S+   D   +
Sbjct: 1   MKATGRRRPKDSIRPPPPPAPSVDHHRQFSRDSDASFASSRPSSLGINRSSAG--DALTD 60

Query: 61  RAVQISTVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDL 120
           R+ Q+S + TINS L    SHS  ++ KP   PS KD++ET+  L+  LD+P TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 120

Query: 121 PILLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDV 180
           PILLK L  P K+NK+ LK P  PH W  +L ++HWLVQ+ALYN +L ++   +    + 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHAWPPLLGVMHWLVQIALYNDHLVSN---LQCFDNT 180

Query: 181 NIYVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRC 240
            +Y L+SYLHY+RGDDD +EA+D+EFM +L+K RD   E +K LE+EV   E ++E LR 
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLEKERDAVAEGVKALEKEVAEREGRLEELRS 240

Query: 241 STESKKMVEDVQ 247
              +K++VE V+
Sbjct: 241 GPSAKEVVEKVR 243

[Close]

BLAST of Csa3G213500 vs. NCBI nr
Match: gi|225448101|ref|XP_002273942.1| (PREDICTED: kinetochore protein ndc80-like [Vitis vinifera])

HSP 1 Score: 107.1 bits (266), Expect = 6.1e-20
Identity = 61/146 (41.78%), Postives = 93/146 (63.70%), Query Frame = 1


Query: 195 ALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEAL---------RCSTESKKMVEDV 254
           +L Q+ +E   K  +  R  L  L+     +EA++  L         RC+ E+KK+VEDV
Sbjct: 418 SLQQQSVENAAKI-EAKRNRLAALQSRSDEVEAQLNFLKKETQNYTSRCAMEAKKLVEDV 477

Query: 255 QQEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKAVVSCK 314
           + E HN+D+VE E  + L+ +KL  QEAIKQ EEEI +CA EL + +DSVS+YK  ++ K
Sbjct: 478 EIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQICAWELYALVDSVSKYKEHMASK 537

Query: 315 ISDMESCLSKAAAGISEAFKNSMPAE 332
           IS+M+S LS+ A  +S+++K S+ A+
Sbjct: 538 ISEMKSNLSETAGAVSDSYKGSLSAQ 562

HSP 2 Score: 232.3 bits (591), Expect = 1.3e-57
Identity = 125/249 (50.20%), Postives = 166/249 (66.67%), Query Frame = 1


Query: 1   MKGTARRRPKASFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPSSASIDMYKE 60
           MK T RRRPK SF PPPPP P      Q  RDSD SFA SRPSS+G+SR S+   D   +
Sbjct: 1   MKATGRRRPKDSFRPPPPPPPSVDHHRQLSRDSDASFAGSRPSSLGISRSSAG--DALTD 60

Query: 61  RAVQISTVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDL 120
           R+ Q+S + TINS L    SHS  ++ KP   PS KD++ET+  L+  LD+P TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 120

Query: 121 PILLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDV 180
           PILLK L  P K+NK+ LK P  PH W  +L ++HWLVQ+ALYN +L ++   +    + 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHAWPSLLGVMHWLVQIALYNDHLVSN---LQCFDNT 180

Query: 181 NIYVLNSYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRC 240
            +Y L+SYLHY+RGDDD +EA+D+EFM +L++ RD   E +K LE+EV   E ++E LR 
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLERERDAVAEGVKALEKEVAEREGRLEELRL 240

Query: 241 STESKKMVE 244
              +K++VE
Sbjct: 241 GPSAKEVVE 240

The following BLAST results are available for this feature:

BLAST of Csa3G213500 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NDC80_CHICK	7.3e-13	27.80	Kinetochore protein NDC80 homolog OS=Gallus gallus GN=NDC80 PE=1 SV=1	[more]
NDC80_XENTR	3.6e-12	29.51	Kinetochore protein NDC80 homolog OS=Xenopus tropicalis GN=ndc80 PE=2 SV=1	[more]
NDC80_XENLA	6.1e-12	29.51	Kinetochore protein NDC80 homolog OS=Xenopus laevis GN=ndc80 PE=1 SV=2	[more]
NDC80_HUMAN	1.8e-11	26.63	Kinetochore protein NDC80 homolog OS=Homo sapiens GN=NDC80 PE=1 SV=1	[more]
NDC80_MACFA	1.8e-11	26.63	Kinetochore protein NDC80 homolog OS=Macaca fascicularis GN=NDC80 PE=2 SV=1	[more]

BLAST of Csa3G213500 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L740_CUCSA	1.0e-186	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G213500 PE=4 SV=1	[more]
F6H969_VITVI	1.0e-58	50.40	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g00950 PE=4 SV=...	[more]
F6H969_VITVI	4.3e-20	41.78	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g00950 PE=4 SV=...	[more]
F6I2P0_VITVI	4.3e-20	42.47	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00940 PE=4 SV=...	[more]
A5AI77_VITVI	6.2e-19	41.78	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035303 PE=4 SV=1	[more]

BLAST of Csa3G213500 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G54630.1	9.7e-40	35.61	Kinetochore protein Ndc80 (InterPro:IPR005550)	[more]

BLAST of Csa3G213500 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700202425\|gb\|KGN57558.1\|	1.4e-186	100.00	hypothetical protein Csa_3G213500 [Cucumis sativus]	[more]
gi\|778680142\|ref\|XP_004149971.2\|	8.6e-131	81.23	PREDICTED: kinetochore protein NDC80 homolog [Cucumis sativus]	[more]
gi\|778680142\|ref\|XP_004149971.2\|	1.2e-47	88.89	PREDICTED: kinetochore protein NDC80 homolog [Cucumis sativus]	[more]
gi\|659077518\|ref\|XP_008439248.1\|	5.5e-45	73.29	PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo]	[more]
gi\|225448101\|ref\|XP_002273942.1\|	6.1e-20	41.78	PREDICTED: kinetochore protein ndc80-like [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005550	Kinetochore_Ndc80

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0022402	cell cycle process
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0032259	methylation
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:1902589	single-organism organelle organization
biological_process	GO:0051315	attachment of mitotic spindle microtubules to kinetochore
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000778	condensed nuclear chromosome kinetochore
cellular_component	GO:0031262	Ndc80 complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005200	structural constituent of cytoskeleton

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU118005	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G213500.1	Csa3G213500.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU118005	CU118005	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005550	Kinetochore protein Ndc80	PANTHER	PTHR10643	KINETOCHORE PROTEIN NDC80	coord: 20..302 score: 9.1
IPR005550	Kinetochore protein Ndc80	PFAM	PF03801	Ndc80_HEC	coord: 47..163 score: 4.7
None	No IPR available	unknown	Coil	Coil	coord: 201..235 scor

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G213500	Cla013051	Watermelon (97103) v1	cuwmB243
Csa3G213500	ClCG05G009820	Watermelon (Charleston Gray)	cuwcgB230
Csa3G213500	Lsi05G001950	Bottle gourd (USVL1VR-Ls)	culsiB211
Csa3G213500	Cla97C05G092210	Watermelon (97103) v2	cuwmbB215
Csa3G213500	Bhi01G001238	Wax gourd	cuwgoB283
Csa3G213500	CSPI03G18740	Wild cucumber (PI 183967)	cpicuB120
Csa3G213500	Cucsa.049600	Cucumber (Gy14) v1	cgycuB029
Csa3G213500	CmaCh16G003690	Cucurbita maxima (Rimu)	cmacuB320
Csa3G213500	CmoCh16G003940	Cucurbita moschata (Rifu)	cmocuB307
Csa3G213500	Cp4.1LG14g04000	Cucurbita pepo (Zucchini)	cpecuB205
Csa3G213500	CsGy3G018580	Cucumber (Gy14) v2	cgybcuB109
Csa3G213500	Carg11297	Silver-seed gourd	carcuB0675

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G213500	Cucurbita moschata (Rifu)	cmocuB687
Csa3G213500	Melon (DHL92) v3.5.1	cumeB166
Csa3G213500	Cucurbita pepo (Zucchini)	cpecuB389
Csa3G213500	Melon (DHL92) v3.6.1	cumedB238
Csa3G213500	Silver-seed gourd	carcuB0400
Csa3G213500	Cucurbita maxima (Rimu)	cmacuB697