Lsi05G001950 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G001950
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionKinetochore protein ndc80, putative
Locationchr05 : 2727951 .. 2734556 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCAATTTCACATACTTAGAACTGTTTCTGTGTTTCAGATTTTTCTTAAGGATTATACTTTTGTTGGTATAGATAGATAGGAACAGAATCAATCAATTATTTTGAACTTTCTTATACCATTTACATGTAGTTCCATATCTATACAATTTTAGAAGCCTCTTACTGTCAAATGACTCGTACCTGTGTTGGGTTGTAGCCTAACCCAAGAACATCACACATGAAGAGACTCATATACTGATTAAGGTTCTGTTTAACTGAGAGATCAATAAGGCCTTAGAAAAGAAGAAACGAATATAGAAATCTTTCATCAGAACTACAAAGTGCTTGACAGAAACTTACACATCGAAAGTCAGCGGAAGAAATCCATCATCTCCTCCGCAGTCTCCTCTCCTCCGCTCTGTTCTTTCCATTAGCTCTTCCTCCAATTAGAAACTATTTTAGCCATGAAAAATTAGAGCAATGGCAAACTTGACTGTTCTGGCTAAATATACATTCTACAAGTACTATTCCGCCTCAGATAGTTTATGGTCGTGCTCCTCCTTTGTTACGTTATGGCTAATTAATGACTACTAATTCTTTAAAGTGAAAGTTTGTTCATAGATGTCTTATGTTGAAGTAACTTTCTGGTTAGGTATTAACAAAACTTAATACAATAAAATTCTTTATTTTAGTAATTAGCACAATTACAAATACTTTTTGTTGCAATAACCAATGCAAATGAACCAATGTTAATTGTTAAACTTTTATGATGAAGAAGTTCTAAATCTTTTGTCTTGCCAATTTTGAACAAATATGTAATGCTCATTGTAGTTGACTTTTGTAGTGTTAAAATTTTTGTTAGCAACACTCCATGAAAGCAAAGTTCTATTTCAAATAATGTTAAAATTTACAATTTAAAAAGTGACTCAAGGTAAAAGTATCATTTTGGTTCTAATGTTTTAAGGTTTGTTTAATTTTAGTCCTATTTCCAATAAATTATGTGTGCGCTTGAGCATGGTGGGGTGTGCCATGACAAAACATGACAAAACAAGGGAATAAACTGTCACTTTGCATTTGAAGCTCTGTGTCATGACAAAACAAGGGAATAAACTGCCACTTTGCGTTTGGAAGCTCTTTACCCTCCTCTTAATGAGGACTCGTAGTATTGGGAAGCATTGAAGCTTGCTTCTTCTCCAATCTATCCCTAATATAACTTATTTGATTCTCTAAACAATGTGAATTTTATATTTTATTGGATCCCCTATCTCCTAATCTCTTGATCGAGCTTGTGTTGGTAGATGTTACTTGATCGGACATGTGTAGGTATATATATAATCTTGAAGAATCTGAAGTAGAGATTTTCAATAGTGATGTTCACGGGGTGCTCCCCATTTCATTTTCCATCTCAACAAAATTTTCTATAGAAATCGGGAGGAAAATTTTATGTTTGTTTATTTTTAAAAAATCAACTAACTTAAATTATTAGTTAAGAAAAGTTTTAATTAATTAAAATTTCTCACTTAATTTTTTTATATGATTAGTTCTACGAGGACAATTTAAATTTAAAGATAAATTACATTAATTTTATAGTAAAATGAAGTAATTACCAACTAAATTATTTATTGGAAAATTATTATAAATAGAAGAAATATCAAATTATTTACAAATATAGAAAAATTTCACTATTAGACAAATTTTTCTACATTTATAAATAATTTGACTCATTTTTCTATATTTGAAAATAGCCCCTTATTTATATATAATCTAAAATTTAAATGTTGAATTATAAAAAAATTGAAAAGAAAACCTTGCAAGGAGGGCGAGAAAGAAACCAAATAGTGGGGTTGGGATGGCTCTTTCGTAAATAATCAAACGTTTTTTCCCGCCATGGTAATTTCAATAATTGACGTGACTGACGTGGCATAGGAATCAAATTTCCTCCTTTTCGAATACCACCTCTCAAATTGAAATTTCAAGTAGCCGCGGGAGACTGAAGACACTCACCGGAGACAAGATGAAGGGAACCGGCCGCCGCCGTCCAAAGGGCTCTTTTAATCCTCCGCCACCGCCTACTCCCCAATTCCGCCGCGATTCCGATGTCAGCTTTGCCAGTAGCCGCCCTTCTTCCATTGGAATGTCTCGTCCTGCCGCCGCCTCCATCGACATGTACAAAGAGCGAGCCGTTCAAATTTCCGCTGTCAACACCATCAATTCGTCTCTCAAGGAGCTCTTCTCTAACTCCTATAACGTAACATTCAAACCCTTCTCTCCCCCTTCCCTCAAAGATCTCACTGAAACCATCAATTTGCTTCTTCATTGTCTCGATTATACTCCGACTAAGCTTGAGGATGATCTCCCTATTGTTCTCAAATCCCTTGGGTATCCCTTCAAAATTAATAAGAACATCCTCAAGAACCCCCCTGCTCCTCATCAGTGGTACCAAATTCTTGCCCTACTTCACTGGCTTGTGCAGGTTGCTGTTTATAACTATAACCTAGCAAACGATTCGGATTCGATTATTACGAGTAACGATGTGAATATATATGTGCTGAATAGCTATTTGCAATATATACGTGGGGATGATGATTCGGTGGAGGCTTTAGATCAGGAGTTTATGGAGCGGTTGAAGAAAGGGAGGGATGATGCATTTGAAAGCTTGAAGGTACTGGAGGAGGAAGTTAAGGAGCTTGAAGCCAAAGTCGAGGCCTTGCGGTCGGATCCCTCGCAGAGGGAGGTCCTTGAGAAGCAGCAGAGTCTGCTTGAAGAGGATGTGAAGAAGTTCCATACAATGATCACTGGGTACAGTGAGAAGATGGAGGACATGAAGAAAATCTTGGAGGAAAAGGAAAAGGAGTTGGAAGTTAAAGTGCACGAGAGAAATAAGATTTGTGAAGAGAATGAAGAACTGAAGAAAAGGGTGGAGTCTCAGTTGTTTAATCCTAGAGACGTGGAGAGGATGAGAAGGGAATTGCAGGCTGTAGAGAGGGACATTGGTGATGCCGAAGTCTCGAGGAACACATGGGAGGAGAAGTCATGGGATCTTGATGCAACTCTAGGAAATAAATTTAAGGAGCTCGAGGCCACGGCAATCGAATGTAACCAAGCTATGAAGAGGTTGCCCCTCTTTCCCATTTCTCTATTTATTGTTTTTATCATTTAGGGGACATTTGGAGCGTTGAGTTGATTATTATAATATGTGGGTTATAATAGTCTAAAGTTATAATAGTTTGTGTTTAGGGTGCATTTTATTTCAATATGGGTTATAAACTTATAATAGTCTGTTTTTGGGTGTAAACTATCTTAGTGTTGATAGAAAATAGTAAACACTGTAACAAAAAGGGATTTAACATAGTCATACTGTATTTAATTGTAAGTTATAATAGTTTGAAATACCAACTATTATAATTGGAATCCCAAACATGGAATGGGCTATAATAGCCCACTCTACCCACCTAAAGTTGGGGGGCCCAAACACCCCCTTAGTTTTTTTTAATGTCTCAAAGTTAATACCTTGAGCATGTAGAATTGAGTTTAAACTTATTTCCATTACTTGTAGGTTGTTGTTTTAAAACCATTCTAGACAATGATCTTATCGACTGAGAAAAAGTTTTGATTGTATTGAATTGTTTGGGGTATCTGCTATCAACCTTTTCTATTAATTTTGTTCAGCGGACTACATTATGAGAACATTTTTAAAATACAATGTTGATAGCTATGGTATATCACCCCCATGGTCTTCTACATATTCAGGGGAAAGTATGTCCAACTTCGTAAAGGTACTAGAAATATTGGTCAATCCAATTTATACTTATCATTTATATTGATAAATTGAAATTTCAGAAAACAGACTATTGTTGGTAAAATTGGAATATTGTGAAGTTTGTTGAATTTTTCTACATTCACGATTCAAATTTTTTCAAGTTAGTTAAGGTATTGTATCCAACATTCAATTAATCTGATCTTTGTCAAATTATAGTTATTGCTTTGCAGGAATGTACTTTATTCTTGTAGTTTTTTTTATTTGATTTTTAGTTATGCATTTCATCACCTCTAATTTTATTTTTGTGAATTCCGCATCTTATGGAACATATCCATCTCAAATGATTCTTATGAGTATAAGAGGTTATAGCCCCTTATAGTAATTGGAATTTTTTTCTTACCAACTCAGCATAATTACTTTGTTGCAACTTCCTTTCTTTGTTATTAGATTAAAGCTTGATAATTGTCATCAGTATGTCCTGAATGCAAAGGGGTCGACACCAGCTGATGTGATGGGGATTGACTATAAGACAACCGTTAGGCCTGCACTTGATTCCTTTGCAGAGGACATAAGGAGAAGTTCTATGACGAAGTTGGAAGAGTTGATTTCTCTCAGGCAGCAATCAAGTGAAAATACAGCTAAAATTGAGTCTAAACGCAATCACATAGCTTCCCTTCAATCCCAAATTAATGAAGTAAGCGCATGACAGAATAAATGGGGGTTTTGCTTGGCTGCTAGGAATTAACTCGTATAAAATGACTTACTGATCATTTAAATGGTTTCTATCTTTCAGGATGAAACACGATTAATCTCCTTAAAAAATGAAATACGAGATTATACATTAAGATGCTCCACAGAATCGAAGAAGATGGTGGAGGATGTTCAACAAGAAGCTCATAACTTAGATCTCGTGGAAAGAGAAGCAGGGGAGAGTTTGAAGGTATCAATACTTTTATTACAATTATTGTCTTTTTTTTTTTTTTGGCTGGGGGGAGGGGGAGTTGACCCCATTTTTCCTTTCTTTTGGTAACCCTGATGAGCAGTTGACTTTGTAGAGGACAGAAATATACTGGTAGTCCTTGAATTTGAAAAGAAGTTTCTATTTGATCCCTTAATTTTAAAAATTGGCATTTTAGTCCCTTGCCTTTAAGAAATGGTACTAAAAGGTCTCCGAACTGTTAGTTGACTAATTGAATGATGATTTGGCAATTAACTTATTGACTAGATTTGTTGACGTGATTTTTCAAATGAGTTGGAAAACTTTTTTTTAGCTATGTGTCATTTCTCTCTCTCTCTTTCCCTACCTTCTTCCTCATTTGCTCCTTCTCCTTTCATCTAAGTGCAAAAATCCATTCACCTTCATTAAAAAATACCCTTTGTCTTTGCCCAAACCTCTCACTTTCTTCCCCAAAGCTTTCAACCAACAACACTTCAAATAAGAAAAGAAGTCTAAGATTTTTGCTAGTGAGAGAGGAAGGGATGCATGCACGAGTGTGAAGAATCCAAGTGAGAGAGAGACATACAGAGTTGAGATAAATTTAAGAGATAAGAGTGTGAGAGCGATAAATGAGAAAGTCAAGGGTGACATTTTGTATTATGTCAATGCAAGATGTGAATGAGAGAAGGGTTTCAGAGTTTAGGTTTTAAGAACAGGATTGAGGAATAACTATATCTCATGTATGGAGTGTTGTTAGTCATTATTTTGAGCTTGCCATTGCTGCCCCCTCTGCACCGATTAGATACATTCTCCTTTGATCTGCTCCATGATCTCGTACTTATCCATACGAGATTTTATCCCCTTCTAAATCAATCCAATGCTAGCAGCGCCATACTTACTAGAAGAGAAGGAGAAAAGAAGGAAGAACAAGGGAAAAGAAAGAGAGAGAAATGCGACATTAACTATATTTGTCACCACATTAAAAGTTCATGTCTACAAATCTAGTCAGCAAGTTAGCTGTCAAATCATCATTTAGTTCACCAATTAACAATTCAAGGACCTTCTAGAACAATTTCTTGGAGGCATGGGACTAGACTTTCAATTGTTGAAACTTAGGGGCCAGCAAACAAAAGTCTATCCTCAAATTTAGGGACAATGAGAATAAAGCATTGATAACTTTGATCCCATTCAAAGTTAGATAACCATTTGGTTTTTGGTCCTTGAAAATTAAGTTTATAAACACAATTCTAACAATTGGTTTCTTTATTTTGTTGTCTACTCTCTATGATTGTTTTCAAAATTCAAGTCAAGTTTTGAAAATTAAAATAAAATAGTTTTTGTTTTTGGGATTTGACTAAAAGTAAAAATGTTTATCTAGAAATATGAATTCTATGATTGGGAAATTGGGAGAAACTAAGCACAAATTTTGTAAACTAAAAACAAAATGTTTATCAGATGAGGTCTTAATTTCTTTGTAGATTTTGTCTAAAATCTAGATGGATCGGTAATCAACTGATAACACAACCAATTCAGTCTTATCAAAGATTTCTAATAAGCATTGCATAGCACCATCTCAATGTATCTTGTCTTACACCTAAACTAGGAGGGAAAGCACTTAACTATATTAACTGTTACAAGACTTACCACCACCTCAGTTTCGTTTATTTAATTAATACTTGATGCTGGAATCTCCTTCAATATTGTTATCATCTGTTTTATAGAATGCCAAATTGACGCATCAGGAAGCAATAAAGCAAGGAGAAGAAGAAATTCAGATGTGTGCTCGTGAACTAGTGTTATGTGTTGACTCTGGTTCACAATATAAAGCATTTGTTAGATCCAAAATTTTAGATATGAAAAGCTGCCTCTCGAACGCTGCTGCCGGTATCTCTGAGGCTTTCAAGAATTCTATCAATGCAGAATAG

mRNA sequence

ATGGGGAATCAAATTTCCTCCTTTTCGAATACCACCTCTCAAATTGAAATTTCAAGTAGCCGCGGGAGACTGAAGACACTCACCGGAGACAAGATGAAGGGAACCGGCCGCCGCCGTCCAAAGGGCTCTTTTAATCCTCCGCCACCGCCTACTCCCCAATTCCGCCGCGATTCCGATGTCAGCTTTGCCAGTAGCCGCCCTTCTTCCATTGGAATGTCTCGTCCTGCCGCCGCCTCCATCGACATGTACAAAGAGCGAGCCGTTCAAATTTCCGCTGTCAACACCATCAATTCGTCTCTCAAGGAGCTCTTCTCTAACTCCTATAACGTAACATTCAAACCCTTCTCTCCCCCTTCCCTCAAAGATCTCACTGAAACCATCAATTTGCTTCTTCATTGTCTCGATTATACTCCGACTAAGCTTGAGGATGATCTCCCTATTGTTCTCAAATCCCTTGGGTATCCCTTCAAAATTAATAAGAACATCCTCAAGAACCCCCCTGCTCCTCATCAGTGGTACCAAATTCTTGCCCTACTTCACTGGCTTGTGCAGGTTGCTGTTTATAACTATAACCTAGCAAACGATTCGGATTCGATTATTACGAGTAACGATGTGAATATATATGTGCTGAATAGCTATTTGCAATATATACGTGGGGATGATGATTCGGTGGAGGCTTTAGATCAGGAGTTTATGGAGCGGTTGAAGAAAGGGAGGGATGATGCATTTGAAAGCTTGAAGGTACTGGAGGAGGAAGTTAAGGAGCTTGAAGCCAAAGTCGAGGCCTTGCGGTCGGATCCCTCGCAGAGGGAGGTCCTTGAGAAGCAGCAGAGTCTGCTTGAAGAGGATGTGAAGAAGTTCCATACAATGATCACTGGGTACAGTGAGAAGATGGAGGACATGAAGAAAATCTTGGAGGAAAAGGAAAAGGAGTTGGAAGTTAAAGTGCACGAGAGAAATAAGATTTGTGAAGAGAATGAAGAACTGAAGAAAAGGGTGGAGTCTCAGTTGTTTAATCCTAGAGACGTGGAGAGGATGAGAAGGGAATTGCAGGCTGTAGAGAGGGACATTGGTGATGCCGAAGTCTCGAGGAACACATGGGAGGAGAAGTCATGGGATCTTGATGCAACTCTAGGAAATAAATTTAAGGAGCTCGAGGCCACGGCAATCGAATGTAACCAAGCTATGAAGAGATTAAAGCTTGATAATTGTCATCAGTATGTCCTGAATGCAAAGGGGTCGACACCAGCTGATGTGATGGGGATTGACTATAAGACAACCGTTAGGCCTGCACTTGATTCCTTTGCAGAGGACATAAGGAGAAGTTCTATGACGAAGTTGGAAGAGTTGATTTCTCTCAGGCAGCAATCAAGTGAAAATACAGCTAAAATTGAGTCTAAACGCAATCACATAGCTTCCCTTCAATCCCAAATTAATGAAGATGAAACACGATTAATCTCCTTAAAAAATGAAATACGAGATTATACATTAAGATGCTCCACAGAATCGAAGAAGATGGTGGAGGATGTTCAACAAGAAGCTCATAACTTAGATCTCGTGGAAAGAGAAGCAGGGGAGAGTTTGAAGAATGCCAAATTGACGCATCAGGAAGCAATAAAGCAAGGAGAAGAAGAAATTCAGATGTGTGCTCGTGAACTAGTGTTATGTGTTGACTCTGGTTCACAATATAAAGCATTTGTTAGATCCAAAATTTTAGATATGAAAAGCTGCCTCTCGAACGCTGCTGCCGGTATCTCTGAGGCTTTCAAGAATTCTATCAATGCAGAATAG

Coding sequence (CDS)

ATGGGGAATCAAATTTCCTCCTTTTCGAATACCACCTCTCAAATTGAAATTTCAAGTAGCCGCGGGAGACTGAAGACACTCACCGGAGACAAGATGAAGGGAACCGGCCGCCGCCGTCCAAAGGGCTCTTTTAATCCTCCGCCACCGCCTACTCCCCAATTCCGCCGCGATTCCGATGTCAGCTTTGCCAGTAGCCGCCCTTCTTCCATTGGAATGTCTCGTCCTGCCGCCGCCTCCATCGACATGTACAAAGAGCGAGCCGTTCAAATTTCCGCTGTCAACACCATCAATTCGTCTCTCAAGGAGCTCTTCTCTAACTCCTATAACGTAACATTCAAACCCTTCTCTCCCCCTTCCCTCAAAGATCTCACTGAAACCATCAATTTGCTTCTTCATTGTCTCGATTATACTCCGACTAAGCTTGAGGATGATCTCCCTATTGTTCTCAAATCCCTTGGGTATCCCTTCAAAATTAATAAGAACATCCTCAAGAACCCCCCTGCTCCTCATCAGTGGTACCAAATTCTTGCCCTACTTCACTGGCTTGTGCAGGTTGCTGTTTATAACTATAACCTAGCAAACGATTCGGATTCGATTATTACGAGTAACGATGTGAATATATATGTGCTGAATAGCTATTTGCAATATATACGTGGGGATGATGATTCGGTGGAGGCTTTAGATCAGGAGTTTATGGAGCGGTTGAAGAAAGGGAGGGATGATGCATTTGAAAGCTTGAAGGTACTGGAGGAGGAAGTTAAGGAGCTTGAAGCCAAAGTCGAGGCCTTGCGGTCGGATCCCTCGCAGAGGGAGGTCCTTGAGAAGCAGCAGAGTCTGCTTGAAGAGGATGTGAAGAAGTTCCATACAATGATCACTGGGTACAGTGAGAAGATGGAGGACATGAAGAAAATCTTGGAGGAAAAGGAAAAGGAGTTGGAAGTTAAAGTGCACGAGAGAAATAAGATTTGTGAAGAGAATGAAGAACTGAAGAAAAGGGTGGAGTCTCAGTTGTTTAATCCTAGAGACGTGGAGAGGATGAGAAGGGAATTGCAGGCTGTAGAGAGGGACATTGGTGATGCCGAAGTCTCGAGGAACACATGGGAGGAGAAGTCATGGGATCTTGATGCAACTCTAGGAAATAAATTTAAGGAGCTCGAGGCCACGGCAATCGAATGTAACCAAGCTATGAAGAGATTAAAGCTTGATAATTGTCATCAGTATGTCCTGAATGCAAAGGGGTCGACACCAGCTGATGTGATGGGGATTGACTATAAGACAACCGTTAGGCCTGCACTTGATTCCTTTGCAGAGGACATAAGGAGAAGTTCTATGACGAAGTTGGAAGAGTTGATTTCTCTCAGGCAGCAATCAAGTGAAAATACAGCTAAAATTGAGTCTAAACGCAATCACATAGCTTCCCTTCAATCCCAAATTAATGAAGATGAAACACGATTAATCTCCTTAAAAAATGAAATACGAGATTATACATTAAGATGCTCCACAGAATCGAAGAAGATGGTGGAGGATGTTCAACAAGAAGCTCATAACTTAGATCTCGTGGAAAGAGAAGCAGGGGAGAGTTTGAAGAATGCCAAATTGACGCATCAGGAAGCAATAAAGCAAGGAGAAGAAGAAATTCAGATGTGTGCTCGTGAACTAGTGTTATGTGTTGACTCTGGTTCACAATATAAAGCATTTGTTAGATCCAAAATTTTAGATATGAAAAGCTGCCTCTCGAACGCTGCTGCCGGTATCTCTGAGGCTTTCAAGAATTCTATCAATGCAGAATAG

Protein sequence

MGNQISSFSNTTSQIEISSSRGRLKTLTGDKMKGTGRRRPKGSFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPAAASIDMYKERAVQISAVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDLPIVLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDVNIYVLNSYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRSDPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEENEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKELEATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMTKLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKKMVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKAFVRSKILDMKSCLSNAAAGISEAFKNSINAE
Homology
[Close]
BLAST of Lsi05G001950 vs. Swiss-Prot
Match: NDC80_MACFA (Kinetochore protein NDC80 homolog OS=Macaca fascicularis GN=NDC80 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.9e-17
Identity = 115/474 (24.26%), Postives = 203/474 (42.83%), Query Frame = 1 

Query: 107 SYNVTFKPFSPPSLKDLTETINLLLHCL----DYTPTKLEDDLPIVLKSLGYPFKINKNI 166
           ++NV+ K    PS+KD  +    L   L    +   TK E+++P + K LGYPF ++K+ 
Sbjct: 109 AHNVSMKSLQAPSVKDFLKIFTFLYGFLCPSYELPDTKFEEEVPRIFKDLGYPFALSKSS 168

Query: 167 LKNPPAPHQWYQILALLHWLVQVAVYNYNLANDS--------------DSIITSNDVNIY 226
           +    APH W  I+A L WL+     +  +   S              D I+ +     Y
Sbjct: 169 MYTVGAPHTWPHIVAALVWLIDCIKIHTAMKESSPLFDDGQPWGEETEDGIMHNKLFLDY 228

Query: 227 VLNSYLQYIRGDDDSVEALDQEFMERLKK-GRDDAF--ESLKVLEEEVKELEAKVEALR- 286
            +  Y  ++ G  DS + ++ E   +LK     DAF  ESL+     + E  A++E  R 
Sbjct: 229 TIKCYESFMSG-ADSFDEMNAELQSKLKDLFNVDAFKLESLEAKNRALNEQIARLEQERE 288

Query: 287 SDPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICE 346
            +P++ E L K ++ L+ DV+K+      Y   +E    IL++K   L  ++      CE
Sbjct: 289 KEPNRLESLRKLKASLQGDVQKYQ----AYMSNLESHSAILDQKLNGLNEEIARVELECE 348

Query: 347 ----ENEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGN 406
               EN  L+  +++Q ++  D+ER+  E   +++ I          ++K W+ +     
Sbjct: 349 TIKQENTRLQNIIDNQKYSVADIERINHERNELQQTINKLTKDLEAEQQKLWNEELKYAR 408

Query: 407 KFKELEATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRP-ALDSFAEDI 466
             + +E    E ++  ++LK        L  KG+   +  G D++    P A  +     
Sbjct: 409 GKEAIETQLAEYHKLARKLK--------LIPKGA--ENSKGYDFEIKFNPEAGANCLVKY 468

Query: 467 RRSSMTKLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRC 526
           R      L+EL++   ++ E   K  +K+  +     Q+N                    
Sbjct: 469 RAQVYVPLKELLN---ETEEEINKARNKKMGLEDTLEQLN------------------AM 528

Query: 527 STESKKMVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCAREL 554
            TESK+ V  +++E   LD +              +Q+ IK+ EEE + CA EL
Sbjct: 529 ITESKRSVRTLKEEVQKLDDL--------------YQQKIKEAEEEDEKCASEL 532

[Close]
BLAST of Lsi05G001950 vs. Swiss-Prot
Match: NDC80_DANRE (Kinetochore protein NDC80 homolog OS=Danio rerio GN=ndc80 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.7e-15
Identity = 123/503 (24.45%), Postives = 227/503 (45.13%), Query Frame = 1 

Query: 109 NVTFKPFSPPSLKDLTETINLLLHCLDYT---PT-KLEDDLPIVLKSLGYPFKINKNILK 168
           ++T K    PS K+  +    + + L+ +   PT K+E+++P +LK LGYPF ++K+ + 
Sbjct: 109 SITVKALQSPSTKEFLKIYEFIYNFLEPSFQMPTAKVEEEIPRMLKDLGYPFALSKSSMY 168

Query: 169 NPPAPHQWYQILALLHWLVQ-VAVYNYNLAND------SDSIITSND-------VNIYVL 228
           +  APH W   L  L WL+  V ++      D      SD +    D       +  Y  
Sbjct: 169 SIGAPHTWPLALGALIWLMDAVKLFGGQREQDLLFSDFSDELCDLEDRTEYNKLIMEYCS 228

Query: 229 NSYLQYIRGDDDSVEALDQEFMERLKK--GRDDAF-----ESLKVLEEEVKELEAKVEAL 288
           ++Y ++++G  D+ +  D +F+ +LKK    D+A      E   +L E V+ LE      
Sbjct: 229 DTYNKFMQG-ADTFDDEDDDFLYKLKKLYNVDEALLHSQQEKHSMLMEHVERLE------ 288

Query: 289 RSDPSQREVLEKQQSL-LEEDVKKFHTMITGYSEKMEDMKKILEEKE----KELEVKVHE 348
           R   + R V ++ + L L+ D++K    +  Y   +E  K  LE K     +ELE    +
Sbjct: 289 RESQTDRLVGKRTEKLRLQTDLQK----LQNYRCTLEAHKTGLENKSAGLTEELEAVEMQ 348

Query: 349 RNKICEENEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATL 408
              + +E   L+  +E+Q F P D+ER+ RE   +++ I     S    E+  W+ +  L
Sbjct: 349 LEGLKQERTRLQHILENQKFTPADIERINRERNELQQTIHGLSQSLEEGEQLVWNEEVNL 408

Query: 409 GNKFKELEATAIECNQAMKRLKLDNCHQYVLNAKGSTPADV-MGIDYKTTVRPALDSFAE 468
               ++ E    E N+  ++LKL       L+A+ +   D  +  DY  T      +  +
Sbjct: 409 SKTKEKAELKVAEYNKLGRKLKL-----IPLSAENACGHDFEIRADYSATTITQYKTQIQ 468

Query: 469 DIRRSSMTKLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTL 528
           +  ++ M ++EE  S  + S+ N +  E+    +  ++S I + E  +  LK +IR    
Sbjct: 469 NPLKNMMVEVEEEFS--RLSNVNLSLEET----VEQVKSNIFDKENDIKQLKEQIRKVDQ 528

Query: 529 RCSTESKKMVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCV 581
           +     ++M  +  + A  LD  E       KN      + I++ EEE++   ++  + V
Sbjct: 529 QLENAMQEMALEDDKWAAELDSAETHKKLFEKNV----MQGIEEAEEEVKAAQQQYHVVV 585

[Close]
BLAST of Lsi05G001950 vs. Swiss-Prot
Match: NDC80_HUMAN (Kinetochore protein NDC80 homolog OS=Homo sapiens GN=NDC80 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.7e-15
Identity = 108/519 (20.81%), Postives = 214/519 (41.23%), Query Frame = 1 

Query: 107 SYNVTFKPFSPPSLKDLTETINLLLHCL----DYTPTKLEDDLPIVLKSLGYPFKINKNI 166
           ++NV+ K    PS+KD  +    L   L    +   TK E+++P + K LGYPF ++K+ 
Sbjct: 109 AHNVSMKSLQAPSVKDFLKIFTFLYGFLCPSYELPDTKFEEEVPRIFKDLGYPFALSKSS 168

Query: 167 LKNPPAPHQWYQILALLHWLVQVAVYNYNLANDS--------------DSIITSNDVNIY 226
           +    APH W  I+A L WL+     +  +   S              D I+ +     Y
Sbjct: 169 MYTVGAPHTWPHIVAALVWLIDCIKIHTAMKESSPLFDDGQPWGEETEDGIMHNKLFLDY 228

Query: 227 VLNSYLQYIRGDDDSVEALDQEFMERLKK-GRDDAF--ESLKVLEEEVKELEAKVEALR- 286
            +  Y  ++ G  DS + ++ E   +LK     DAF  ESL+     + E  A++E  R 
Sbjct: 229 TIKCYESFMSG-ADSFDEMNAELQSKLKDLFNVDAFKLESLEAKNRALNEQIARLEQERE 288

Query: 287 SDPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICE 346
            +P++ E L K ++ L+ DV+K+      Y   +E    IL++K   L  ++      CE
Sbjct: 289 KEPNRLESLRKLKASLQGDVQKYQ----AYMSNLESHSAILDQKLNGLNEEIARVELECE 348

Query: 347 ----ENEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGN 406
               EN  L+  +++Q ++  D+ER+  E   +++ I          ++K W+ +     
Sbjct: 349 TIKQENTRLQNIIDNQKYSVADIERINHERNELQQTINKLTKDLEAEQQKLWNEELKYAR 408

Query: 407 KFKELEATAIECNQAMKRLKL-----DNCHQYVLNAKGSTPADV-MGIDYKTTVRPALDS 466
             + +E    E ++  ++LKL     +N   Y    K +  A     + Y+  V   L  
Sbjct: 409 GKEAIETQLAEYHKLARKLKLIPKGAENSKGYDFEIKFNPEAGANCLVKYRAQVYVPLKE 468

Query: 467 FAEDIRRSSMTKLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRD 526
              +        L + + L     +  A I   +  + +L+ ++ + +        E  +
Sbjct: 469 LLNETEEEINKALNKKMGLEDTLEQLNAMITESKRSVRTLKEEVQKLDDLYQQKIKEAEE 528

Query: 527 YTLRCSTESKKMVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELV 586
              +C++E    +E +++  H L+               T  + + +   E+    RE  
Sbjct: 529 EDEKCASE----LESLEKHKHLLE--------------STVNQGLSEAMNELDAVQREYQ 588

Query: 587 LCVDSGSQYKAFVRSKILDMKSCLSNAAAGISEAFKNSI 594
           L V + ++ +  V + +  +   ++     + +  +  I
Sbjct: 589 LVVQTTTEERRKVGNNLQRLLEMVATHVGSVEKHLEEQI 604

[Close]
BLAST of Lsi05G001950 vs. Swiss-Prot
Match: NDC80_CHICK (Kinetochore protein NDC80 homolog OS=Gallus gallus GN=NDC80 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.5e-13
Identity = 138/587 (23.51%), Postives = 248/587 (42.25%), Query Frame = 1 

Query: 9   SNTTSQIEISSSRGRLKTLTGDKMK-GTGRRRPKGSFNP-PPPPTPQFRRDSDVSFASSR 68
           S+TTS      S   L+    +KM   T + + +G+F       T     +  VSF   R
Sbjct: 4   SSTTSGSSGRQSTMVLRVQDSNKMGLQTPQTKDRGTFGKLSMSKTTSATSERKVSFFGKR 63

Query: 69  PSSIGMSRPAAASI---DMYKE-RAVQISAV--NTINSSLKELFSNSY--NVTFKPFSPP 128
            S  G SR +   +   +  K+ R +   A     I    + L  N Y  NVT K    P
Sbjct: 64  ASGAGGSRNSQYGMFGTEKIKDPRPLHDKAFIQQCIKQLCEFLVENGYAHNVTIKSLQSP 123

Query: 129 SLKDLTETINLLLHCL----DYTPTKLEDDLPIVLKSLGYPFKINKNILKNPPAPHQWYQ 188
           S+KD  +    +   L    +   +K E+++P V K LGYPF ++K+ +    APH W Q
Sbjct: 124 SVKDFIKIFTFIYGFLCPSYELPDSKFEEEIPRVFKELGYPFPLSKSSMYTVGAPHTWPQ 183

Query: 189 ILALLHWLVQ-VAVY------------NYNLANDSDSIITSNDVNI-YVLNSYLQYIRGD 248
           I+A L WL     +Y              N   ++D  I  N + + YV+  Y  +++G 
Sbjct: 184 IVAALIWLTDCFKLYAAMRENPSSFDDGQNWGGETDDGIVHNKLFMDYVVKCYEHFMKG- 243

Query: 249 DDSVEALDQEFMERLKK-GRDDAFE------SLKVLEEEVKELEAKVEALRSDPSQREVL 308
            D+ E LD E   +LK     D F+        K L EE+  LE + E   S+P +   L
Sbjct: 244 GDTYEELDAEVQSKLKDLFNVDEFKIEGLAAENKRLHEEIARLEKERE---SEPDRLVSL 303

Query: 309 EKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEK----ELEVKVHERNKICEENEEL 368
            K +S  + DV+K+      Y   +E    IL++K K    E+E    E   + +EN  L
Sbjct: 304 RKLRSSFQADVQKYQ----AYLANLESHTTILDQKMKSVNEEVETTEMEVEAMKQENARL 363

Query: 369 KKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKELEATA 428
           +   ++Q ++  D+ER+  E   +++ I          E + W+ +       + +E   
Sbjct: 364 QHIFDNQKYSVADIERINHERNELQQTINKLTKELEAEEHQLWNEELKYARNKEAIETQL 423

Query: 429 IECNQAMKRLKL-------DNCHQYVLNAKGSTPADVMGIDYKTTVRPAL----DSFAED 488
            E ++  ++LKL          H + ++       + + + Y+T ++  L    +   E+
Sbjct: 424 AEYHKLARKLKLIPISAENSKGHDFEIHFNPEAGPNCL-VKYRTQIKAPLMEIVNQTEEE 483

Query: 489 IRRSSMTKLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLR 546
           IR+++  K+    SL     +  A +  K++ + +L+ +  + +        E  +   +
Sbjct: 484 IRKATQRKM----SLEDTLEQVNAMVAEKKSSVKTLKEEAEKLDDLYHQKLKEAEEEEQK 543

[Close]
BLAST of Lsi05G001950 vs. Swiss-Prot
Match: NDC80_XENLA (Kinetochore protein NDC80 homolog OS=Xenopus laevis GN=ndc80 PE=1 SV=2)

HSP 1 Score: 76.3 bits (186), Expect = 1.3e-12
Identity = 107/515 (20.78%), Postives = 222/515 (43.11%), Query Frame = 1 

Query: 103 LFSNSYN--VTFKPFSPPSLKDLTETINLLLH--CLDYT--PTKLEDDLPIVLKSLGYPF 162
           L  N Y+  +T K    PS KD  +    +    C +Y    +K E+++P + K LGYPF
Sbjct: 102 LNENGYSQALTVKSLQGPSTKDFLKIFAFIYTFICPNYENPESKFEEEIPRIFKELGYPF 161

Query: 163 KINKNILKNPPAPHQWYQILALLHWLVQV------------AVYNYNLANDSDSIITSND 222
            ++K+ +    APH W QI+A L WL+                 +  +   S++ I  N 
Sbjct: 162 ALSKSSMYTVGAPHTWPQIVAALVWLIDCVKLCCVLRSENPVFEDPPMGEQSENGIDFNQ 221

Query: 223 VNI-YVLNSYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEAL 282
           + + Y +  Y Q++ G  D+ E  D +   RLK+       +L+ L++E + L  ++E L
Sbjct: 222 LFLDYTVRCYDQFMEG-RDTFEEYDTDVCIRLKEAYHVDESNLEALQQESRRLMEEIERL 281

Query: 283 ----RSDPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHER 342
                ++P +   + K ++ L+ D++K+   +T        + + +    +ELE    E 
Sbjct: 282 EKEKENEPDRLASMRKLKASLQADIQKYQNYLTEIESHSTLLDQRVSSISEELEATELES 341

Query: 343 NKICEENEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLG 402
             I +EN  LK  +++Q ++  D+ER++ E   +++ I       +  +++ W  +    
Sbjct: 342 RAIQQENLRLKNILDNQKYSVADIERIKYEETELQQTIAKLTKDLDEDKQQLWHEELKYA 401

Query: 403 NKFKELEATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDI 462
              + +E    E ++  ++++L              P       Y   ++  LDS    +
Sbjct: 402 KMKESVETQLSEFHKIGRKVRL------------IPPTAEFANGYDFQIQCNLDSEQSSL 461

Query: 463 RRSSMTKLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRC 522
                     L+ +  QS  + A   +K+  +  +  Q+N   T +   KNE++      
Sbjct: 462 MHYRNKINVPLVEILSQSEGHIASSTNKKMGVEDMVEQLN---TLIGEKKNEVKVQ---- 521

Query: 523 STESKKMVEDVQQEAHNLDLVEREAGESLKNAKLTHQ-------EAIKQGEEEIQMCARE 582
             E++K+ E  QQ+    +  E+     +++ +   Q       +++ +  +++Q   +E
Sbjct: 522 KDEAQKLEEIYQQKVEESEEHEKRWISEIESLEKHRQLLESGVNKSLDEAMKDLQKEQQE 581

Query: 583 LVLCVDSGSQYKAFVRSKILDMKSCLSNAAAGISE 588
           L L      +    V +K++ +   ++N  A I +
Sbjct: 582 LQLVEHRTEEEMRQVENKLVRVVHAVANHVAVIEK 596

[Close]
BLAST of Lsi05G001950 vs. TrEMBL
Match: F6I2P0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00940 PE=4 SV=1)

HSP 1 Score: 605.5 bits (1560), Expect = 6.9e-170
Identity = 336/571 (58.84%), Postives = 431/571 (75.48%), Query Frame = 1 

Query: 32  MKGTGRRRPKGSFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPAAASIDMYKE 91
           MK TGRRRPK SF PPPPP P      Q  RDSD SFA SRPSS+G+SR +A   D   +
Sbjct: 215 MKATGRRRPKDSFRPPPPPPPSVDHHRQLSRDSDASFAGSRPSSLGISRSSAG--DALTD 274

Query: 92  RAVQISAVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDL 151
           R+ Q+SA+ TINS L    S+S  ++ KP   PS KD++ET+  L+  LD+  TKLEDDL
Sbjct: 275 RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 334

Query: 152 PIVLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDV 211
           PI+LK L  P K+NK+ LK P  PH W  +L ++HWLVQ+A+YN +L ++       ++ 
Sbjct: 335 PILLKHLNCPIKLNKSALKAPGTPHAWPSLLGVMHWLVQIALYNDHLVSNLQCF---DNT 394

Query: 212 NIYVLNSYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRS 271
            +Y L+SYL YIRGDDD +EA+D+EFM +L++ RD   E +K LE+EV E E ++E LR 
Sbjct: 395 FVYALDSYLHYIRGDDDGMEAVDREFMGKLERERDAVAEGVKALEKEVAEREGRLEELRL 454

Query: 272 DPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEE 331
            PS +EV+EK++ +LEEDVKKFH +I  +S ++  ++KILEEKEKEL VKV E N+ICEE
Sbjct: 455 GPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNRICEE 514

Query: 332 NEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKEL 391
           NEELKKRVE Q FN RD ERM+RELQAVERDI +AEV+RN WEEKSWDLD T+G+KFKEL
Sbjct: 515 NEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHKFKEL 574

Query: 392 EATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMT 451
           EA +IECNQA++RLKL N  QYVLNAKGS+PA+V+GIDYK+T++PALDSFA+DI +SSM+
Sbjct: 575 EALSIECNQALRRLKLGNGLQYVLNAKGSSPAEVLGIDYKSTLKPALDSFADDINKSSMS 634

Query: 452 KLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKK 511
           KLEELISL+QQS EN AKIE+KRN +A+LQS  +E E +LI LK E ++YT RC+TE+KK
Sbjct: 635 KLEELISLQQQSVENAAKIEAKRNRLAALQSSSDEVEAQLIFLKKESQNYTSRCATEAKK 694

Query: 512 MVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKA 571
           +VEDV+ E HN+D+VERE  + L+ +KL  QEAIKQ EEEIQMCA EL   VDS S+YK 
Sbjct: 695 LVEDVEIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQMCAWELYALVDSVSKYKE 754

Query: 572 FVRSKILDMKSCLSNAAAGISEAFKNSINAE 597
            + SKI +MK  LS  A  +S+++K S+ A+
Sbjct: 755 HMASKISEMKCNLSETAGAVSDSYKGSLLAQ 776

[Close]
BLAST of Lsi05G001950 vs. TrEMBL
Match: F6H969_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g00950 PE=4 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 7.6e-169
Identity = 334/571 (58.49%), Postives = 431/571 (75.48%), Query Frame = 1 

Query: 32  MKGTGRRRPKGSFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPAAASIDMYKE 91
           MK TGRRRPK S  PPPPP P      QF RDSD SFASSRPSS+G++R +A   D   +
Sbjct: 1   MKATGRRRPKDSIRPPPPPAPSVDHHRQFSRDSDASFASSRPSSLGINRSSAG--DALTD 60

Query: 92  RAVQISAVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDL 151
           R+ Q+SA+ TINS L    S+S  ++ KP   PS KD++ET+  L+  LD+  TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 120

Query: 152 PIVLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDV 211
           PI+LK L  P K+NK+ LK P  PH W  +L ++HWLVQ+A+YN +L ++       ++ 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHAWPPLLGVMHWLVQIALYNDHLVSNLQCF---DNT 180

Query: 212 NIYVLNSYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRS 271
            +Y L+SYL YIRGDDD +EA+D+EFM +L+K RD   E +K LE+EV E E ++E LRS
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLEKERDAVAEGVKALEKEVAEREGRLEELRS 240

Query: 272 DPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEE 331
            PS +EV+EK + +LEEDVKKFH +I  +S ++  ++KILEEKEKEL VKV E N+ICEE
Sbjct: 241 GPSAKEVVEKVRGVLEEDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNRICEE 300

Query: 332 NEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKEL 391
           NEELKKRVE Q FN RD ERM+RELQAVERDI +AEV+RN WEEKSWDLD T+G+KFKEL
Sbjct: 301 NEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHKFKEL 360

Query: 392 EATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMT 451
           EA +IECNQA++RLKL N  QYVLNAKGS+P +V+GIDYK+ ++PALDSFA+DI +SSM+
Sbjct: 361 EALSIECNQALRRLKLGNGLQYVLNAKGSSPTEVLGIDYKSALKPALDSFADDINKSSMS 420

Query: 452 KLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKK 511
           KLEELISL+QQS EN AKIE+KRN +A+LQS+ +E E +L  LK E ++YT RC+ E+KK
Sbjct: 421 KLEELISLQQQSVENAAKIEAKRNRLAALQSRSDEVEAQLNFLKKETQNYTSRCAMEAKK 480

Query: 512 MVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKA 571
           +VEDV+ E HN+D+VERE  + L+ +KL  QEAIKQ EEEIQ+CA EL   VDS S+YK 
Sbjct: 481 LVEDVEIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQICAWELYALVDSVSKYKE 540

Query: 572 FVRSKILDMKSCLSNAAAGISEAFKNSINAE 597
            + SKI +MKS LS  A  +S+++K S++A+
Sbjct: 541 HMASKISEMKSNLSETAGAVSDSYKGSLSAQ 562

[Close]
BLAST of Lsi05G001950 vs. TrEMBL
Match: A5AI77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035303 PE=4 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 6.4e-168
Identity = 334/571 (58.49%), Postives = 428/571 (74.96%), Query Frame = 1 

Query: 32  MKGTGRRRPKGSFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPAAASIDMYKE 91
           MK TGRRRPK S  PPPPP P      QF RDSD SFASSRPSS+G++R +A   D   +
Sbjct: 1   MKATGRRRPKDSIRPPPPPAPSVDHHRQFSRDSDASFASSRPSSLGINRSSAG--DALTD 60

Query: 92  RAVQISAVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDL 151
           R+ Q+SA+ TINS L    S+S  ++ KP   PS KD++ET+  L+  LD+  TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 120

Query: 152 PIVLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDV 211
           PI+LK L  P K+NK+ LK P  PH W  +L ++HWLVQ+A+YN +L ++       ++ 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHAWPPLLGVMHWLVQIALYNDHLVSNLQCF---DNT 180

Query: 212 NIYVLNSYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRS 271
            +Y L+SYL YIRGDDD +EA+D+EFM +L+  RD   E +K LE+EV E E ++E LRS
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLEXERDAVAEGVKALEKEVAEREGRLEELRS 240

Query: 272 DPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEE 331
            PS +EV+EK++ +LEEDVKKFH +I  +S ++  ++KILEEKEKEL VKV E N+ICEE
Sbjct: 241 GPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNRICEE 300

Query: 332 NEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKEL 391
           NEELKKRVE Q FN RD ERM+RELQAVERDI +AEV+RN WEEKSWDLD T+G+KFKEL
Sbjct: 301 NEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHKFKEL 360

Query: 392 EATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMT 451
           EA +IECNQA++RLKL N  QYVLNAKGS+P +V+GIDYK+ ++PALDSFA+DI +SSM+
Sbjct: 361 EALSIECNQALRRLKLGNGLQYVLNAKGSSPXEVLGIDYKSXLKPALDSFADDINKSSMS 420

Query: 452 KLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKK 511
           KLEELISL+QQS EN AKIE+KRN +A+LQS  +E E +LI LK E ++YT RC+TE+KK
Sbjct: 421 KLEELISLQQQSVENAAKIEAKRNRLAALQSXSDEVEAQLIFLKKESQNYTSRCATEAKK 480

Query: 512 MVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKA 571
           +VEDV+ E HN+D VERE  + L+ +KL  QEAIKQ EEEIQ CA EL   VDS S+YK 
Sbjct: 481 LVEDVEIETHNVDXVEREVADVLETSKLKLQEAIKQNEEEIQXCAWELYALVDSVSKYKE 540

Query: 572 FVRSKILDMKSCLSNAAAGISEAFKNSINAE 597
            + SKI +MK  LS  A  +S+++K S+ A+
Sbjct: 541 HMASKISEMKCNLSETAGAVSDSYKGSLLAQ 562

[Close]
BLAST of Lsi05G001950 vs. TrEMBL
Match: M5XWK4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003403mg PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 3.8e-160
Identity = 319/564 (56.56%), Postives = 427/564 (75.71%), Query Frame = 1 

Query: 38  RRPKGSFNP-PPPPTP--QFR-RDSDVSFASSRPSSIGMSRPAAASIDMYKERAVQISAV 97
           RRPK SFNP PPP TP   FR RDSD SFASSRPSS+GM  P + ++D+YK+R+ Q + +
Sbjct: 9   RRPKESFNPRPPPATPLDHFRHRDSDASFASSRPSSVGMG-PTSNALDLYKDRSFQQATL 68

Query: 98  NTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDLPIVLKSLG 157
           ++INS L    S+S  + F  F  PS K++TET+  L+  LDY   KLEDDLP++LK L 
Sbjct: 69  SSINSYLA---SHSLQI-FLKFPIPSAKEITETLKFLVARLDYPNPKLEDDLPVILKFLK 128

Query: 158 YPFKINKNILKNPPA-PHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDVNIYVLNS 217
            PFK NK++L+NP    HQW  +LA++HWL Q+ +YN +LA++S + + +N ++ Y L S
Sbjct: 129 CPFKPNKSVLRNPTVNHHQWPTLLAVIHWLFQIVLYNDHLASNSGAFVDNNAMSAYALES 188

Query: 218 YLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRSDPSQREV 277
           Y  YI GDDDSVEALD++F+E+L+  R++A ES++VLE    ELE K+E +RS PS+RE 
Sbjct: 189 YSYYISGDDDSVEALDRQFLEKLEAERENAEESIRVLEATAAELEGKMEEMRSGPSKREA 248

Query: 278 LEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEENEELKKR 337
           LEK++ +LE+DV KF+ MI   ++ +  ++ +LE KEKELE KV +  +ICEENEELKKR
Sbjct: 249 LEKERGVLEQDVNKFNEMIGSLAKSVAKLEAVLEAKEKELEAKVADTRRICEENEELKKR 308

Query: 338 VESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKELEATAIEC 397
           VE Q FN RDV+RM+RELQAVERDIG+AE++RN WEEK+WDLD  L +KFKELE  A+EC
Sbjct: 309 VELQTFNARDVDRMKRELQAVERDIGEAELARNAWEEKAWDLDTMLSHKFKELETLAMEC 368

Query: 398 NQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMTKLEELIS 457
           NQAM+RLKL N  QYVLNAKGST ADVMGIDYK T++PAL+S+++DI++SS+ KLEELIS
Sbjct: 369 NQAMRRLKLGNGFQYVLNAKGSTAADVMGIDYKLTLKPALNSYSDDIKKSSVEKLEELIS 428

Query: 458 LRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKKMVEDVQQ 517
           L+QQSSE +A IE KRN IA+LQS I+E E +L  LK E  DYT RC+ E+++M++DVQ 
Sbjct: 429 LQQQSSELSATIEGKRNFIATLQSHIDEVEAQLNLLKKETHDYTYRCAIEARQMMDDVQM 488

Query: 518 EAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKAFVRSKIL 577
           EAHNLD++ER+A E LK +KL  QE IKQ EEE + CA EL+  +DS S++K +V+SKIL
Sbjct: 489 EAHNLDILERDAEEILKTSKLKLQETIKQTEEETKKCAYELMTVIDSVSKHKEYVQSKIL 548

Query: 578 DMKSCLSNAAAGISEAFKNSINAE 597
           +M+  +S  A  +S+A K S+ ++
Sbjct: 549 EMRRDVSETAVAVSDAHKGSLQSQ 567

[Close]
BLAST of Lsi05G001950 vs. TrEMBL
Match: A5ANM2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041326 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 1.1e-156
Identity = 318/568 (55.99%), Postives = 413/568 (72.71%), Query Frame = 1 

Query: 32  MKGTGRRRPKGSFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPAAASIDMYKE 91
           MK TGRRRPK S  PPPPP P      QF R+SD SFASSRPSS+G++R +A   D   +
Sbjct: 1   MKATGRRRPKDSIRPPPPPPPSVDHHRQFSRNSDASFASSRPSSLGINRSSAG--DALTD 60

Query: 92  RAVQISAVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDL 151
           R+ Q+SA+ TINS L    S+S  +  KP   PS KD++ET+  L+  LD+  TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLPLKP-PLPSAKDISETLKFLISELDFPTTKLEDDL 120

Query: 152 PIVLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDV 211
           PI+LK L  P K+NK+ LK P  PH W  +L ++HWLVQ+A+YN +L ++ +     ++ 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHSWPSLLGVMHWLVQIALYNDHLMSNLECF---DNT 180

Query: 212 NIYVLNSYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRS 271
            +Y L+SYL YIRGDDD +EA+D+EFM +L++ RD   E +K LE+EV E E ++E LRS
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLERERDAVAEGVKALEKEVTEREGRLEELRS 240

Query: 272 DPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEE 331
            PS +EV+EK++ +LEEDVKKFH +I  +S ++  ++KILEEKEKEL VKV E N+ICEE
Sbjct: 241 GPSAKEVMEKERGVLEEDVKKFHAIIAEFSGRISSVEKILEEKEKELGVKVEENNRICEE 300

Query: 332 NEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKEL 391
           NEELKKRVE Q FN RD ERM+RELQAVERDI +AEV+RN WEEKSWD+D T+G+K    
Sbjct: 301 NEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDVDTTIGHK---- 360

Query: 392 EATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMT 451
                        LKL N  QYVLNAKGS+PA+V+GIDYK+T++PALDSFA+DI +SSM+
Sbjct: 361 -------------LKLGNGLQYVLNAKGSSPAEVLGIDYKSTLKPALDSFADDINKSSMS 420

Query: 452 KLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKK 511
           KLEELISL+QQS EN AKIE+KRNH+A+LQS  +E E +L  LK E ++YT RC+ E+KK
Sbjct: 421 KLEELISLQQQSVENAAKIEAKRNHLAALQSSSDEVEAQLNFLKKETQNYTSRCAXEAKK 480

Query: 512 MVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKA 571
           +VEDV+ E HN+D+VERE  + L+ +KL  QEAIKQ EEEIQ+CA EL   VDS  +YK 
Sbjct: 481 LVEDVEIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQICAWELYALVDSVXKYKE 540

Query: 572 FVRSKILDMKSCLSNAAAGISEAFKNSI 594
            + SK  +MKS LS  A  +S+++K S+
Sbjct: 541 HMASKXSEMKSNLSETAGAVSDSYKGSL 542

[Close]
BLAST of Lsi05G001950 vs. TAIR10
Match: AT3G54630.1 (AT3G54630.1 Kinetochore protein Ndc80 (InterPro:IPR005550))

HSP 1 Score: 417.9 bits (1073), Expect = 1.0e-116
Identity = 241/564 (42.73%), Postives = 370/564 (65.60%), Query Frame = 1 

Query: 37  RRRPKGSFNPPPPPTPQFR--------RDSDVSFASSRPSSIGMSRPAAASIDMYKERAV 96
           RR   G    PPPP P           RDSD SFASSRPSSIG+    A+      +R+ 
Sbjct: 9   RRTTVGFGGAPPPPPPSIEQQRHLFNSRDSDASFASSRPSSIGLGGRGASD-----DRSS 68

Query: 97  QISAVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYT--PTKLEDDLP 156
            I  +N        L ++++ ++ +    PS+KD++ET+  LL  LDY     K ++DL 
Sbjct: 69  MIRFINAF------LSTHNFPISIRGNPVPSVKDISETLKFLLSALDYPCDSIKWDEDLV 128

Query: 157 IVLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDVN 216
             LKS   PFKI K+ LK P  PH W  +LA++HWL ++A ++ +L ++S S+   N +N
Sbjct: 129 FFLKSQKCPFKITKSSLKAPNTPHNWPTVLAVVHWLAELARFHQHLVSNSTSVPEDNSMN 188

Query: 217 IYVLNSYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRSD 276
            + + S+  +IRG+DD V  LD +F+ +L+  +    E++   E+   ELEAK+E+LR  
Sbjct: 189 FFAIQSFGHFIRGEDDKVNDLDSQFLGKLEAEKTSVAETISGCEKISGELEAKLESLRKG 248

Query: 277 PSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEEN 336
           PS++E LEK ++ LE DV KF T++  Y+++   M+K++EEK KEL+ K  ER +I  EN
Sbjct: 249 PSKKESLEKVKADLENDVNKFRTIVVEYTDRNPAMEKVVEEKAKELKAKEEERERISVEN 308

Query: 337 EELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKELE 396
           +ELKK VE Q F+  DV RMRRELQAVERD+ DAEV+R+ W++K+W+L++ + N+F +++
Sbjct: 309 KELKKSVELQNFSAADVNRMRRELQAVERDVADAEVARDGWDQKAWELNSQIRNQFHQIQ 368

Query: 397 ATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMTK 456
             AI+CNQA++RLKLD   Q+ +N +G TPA VMG+DYK+ V+PAL S  + I+ SS  K
Sbjct: 369 TLAIDCNQALRRLKLD--IQFAVNERGETPAAVMGVDYKSVVKPALCSLCDGIKGSSAEK 428

Query: 457 LEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKKM 516
           +EEL++L+   SE  +KIESKR+ + S+Q QIN+ E ++  +K E ++ + +C  E+K +
Sbjct: 429 VEELVTLQHHKSEMASKIESKRSLLGSIQLQINDLEEKMKLVKKETQELSTKCDLEAKTL 488

Query: 517 VEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKAF 576
           VE V+ EA NL++VE+EA E +K ++L  QEA+K+ EEE+Q CA +L   +DS S+ K +
Sbjct: 489 VESVKAEALNLEVVEKEAAEFVKASELRLQEAVKESEEEVQACAAQLFALIDSISKQKEY 548

Query: 577 VRSKILDMKSCLSNAAAGISEAFK 591
           + SKI ++K+ +++ A+ +SE +K
Sbjct: 549 MDSKISEIKTGVADTASAVSEIYK 559

[Close]
BLAST of Lsi05G001950 vs. NCBI nr
Match: gi|778680142|ref|XP_004149971.2| (PREDICTED: kinetochore protein NDC80 homolog [Cucumis sativus])

HSP 1 Score: 956.1 bits (2470), Expect = 3.0e-275
Identity = 503/565 (89.03%), Postives = 533/565 (94.34%), Query Frame = 1 

Query: 32  MKGTGRRRPKGSFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPAAASIDMYKERAVQIS 91
           MKGT RRRPK SFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRP++ASIDMYKERAVQIS
Sbjct: 1   MKGTARRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPSSASIDMYKERAVQIS 60

Query: 92  AVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDLPIVLKS 151
            VNTINSSLKELFS+S+NVTFKPFSPPSLKDLTETINLLL CLDY PTKLEDDLPI+LKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 152 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDVNIYVLN 211
           LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVA+YNYNLANDS+ I T +DVNIYVLN
Sbjct: 121 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVALYNYNLANDSNPIFTGHDVNIYVLN 180

Query: 212 SYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRSDPSQRE 271
           SYL Y+RGDDDSVEALDQEFMERLKK RDD+ ESLK LEEEVK LEAKVEALRSDPSQRE
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLKKTRDDSRESLKELEEEVKVLEAKVEALRSDPSQRE 240

Query: 272 VLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEENEELKK 331
           VLEKQQSLLEEDVKKFHTMI GYSEKM++MKK+LEEKEKEL+VK+ ERNKICEENEELKK
Sbjct: 241 VLEKQQSLLEEDVKKFHTMIAGYSEKMQEMKKLLEEKEKELDVKMEERNKICEENEELKK 300

Query: 332 RVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKELEATAIE 391
           RVESQLFNPRDVERMRRELQAVERDIGDAEVSRN+WEEKSWDLDATLGNKFKELEA A+E
Sbjct: 301 RVESQLFNPRDVERMRRELQAVERDIGDAEVSRNSWEEKSWDLDATLGNKFKELEAIAME 360

Query: 392 CNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMTKLEELI 451
           CNQAM+RLKLD+CHQYVLNAKGSTPADVMGIDYKTT++PALDSFAEDIRRSSM KLEELI
Sbjct: 361 CNQAMRRLKLDSCHQYVLNAKGSTPADVMGIDYKTTLKPALDSFAEDIRRSSMMKLEELI 420

Query: 452 SLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKKMVEDVQ 511
           SLRQQSSENTAKIESKR+HIASLQS +NE ET+LISLK+E+RDY LRCSTESKKMVEDVQ
Sbjct: 421 SLRQQSSENTAKIESKRDHIASLQSHVNEHETQLISLKDEMRDYILRCSTESKKMVEDVQ 480

Query: 512 QEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKAFVRSKI 571
           QEAHNLDLVE EA ESLKNAKL HQEAIKQGEEEI MCAREL+ C+DS SQYKA V  KI
Sbjct: 481 QEAHNLDLVEGEAEESLKNAKLAHQEAIKQGEEEIHMCARELLSCLDSVSQYKAVVSCKI 540

Query: 572 LDMKSCLSNAAAGISEAFKNSINAE 597
            DM+SCLS AAAGISEAFKNS+ AE
Sbjct: 541 SDMESCLSKAAAGISEAFKNSMPAE 565

[Close]
BLAST of Lsi05G001950 vs. NCBI nr
Match: gi|659077518|ref|XP_008439248.1| (PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo])

HSP 1 Score: 941.0 bits (2431), Expect = 9.9e-271
Identity = 497/565 (87.96%), Postives = 526/565 (93.10%), Query Frame = 1 

Query: 32  MKGTGRRRPKGSFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPAAASIDMYKERAVQIS 91
           MKGTGRRRPK SFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRP +ASIDMYKERAVQIS
Sbjct: 1   MKGTGRRRPKASFNPPPPPTPQFRRDSDVSFASSRPSSIGMSRPPSASIDMYKERAVQIS 60

Query: 92  AVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDLPIVLKS 151
            VNTINSSLKELFS+S+NVTFKPFSPPSLKDLTETINLLL CLDY PTKLEDDLPI+LKS
Sbjct: 61  TVNTINSSLKELFSHSFNVTFKPFSPPSLKDLTETINLLLQCLDYPPTKLEDDLPILLKS 120

Query: 152 LGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDVNIYVLN 211
           LGYPFKINKNILK PPAPHQWYQILALLHWLVQVA+YNYNLANDS+ +   +DVNIYVLN
Sbjct: 121 LGYPFKINKNILKTPPAPHQWYQILALLHWLVQVALYNYNLANDSNPVFMGHDVNIYVLN 180

Query: 212 SYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRSDPSQRE 271
           SYL Y+RGDDDSVEALDQEFMERLKK RDD+ ESLK LEEEVK LEAKVEALRSDPSQRE
Sbjct: 181 SYLHYMRGDDDSVEALDQEFMERLKKTRDDSCESLKELEEEVKVLEAKVEALRSDPSQRE 240

Query: 272 VLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEENEELKK 331
           VLEKQQSLLEEDVKKFHTMI GYSEKM++MKK+LEEKEKELEVK+ ERNKICEENEELKK
Sbjct: 241 VLEKQQSLLEEDVKKFHTMIAGYSEKMQEMKKLLEEKEKELEVKMEERNKICEENEELKK 300

Query: 332 RVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKELEATAIE 391
           RVESQLFNPRDVERMRRELQAVERDIGDAEVSRN+WEEKSWDLDATLGNKFKELEA A+E
Sbjct: 301 RVESQLFNPRDVERMRRELQAVERDIGDAEVSRNSWEEKSWDLDATLGNKFKELEAIAME 360

Query: 392 CNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMTKLEELI 451
           CNQAM+RLKLD+CHQYVLNAKGSTPADVMGIDYK+TV+PALDSFAEDIRRSSM KLEELI
Sbjct: 361 CNQAMRRLKLDSCHQYVLNAKGSTPADVMGIDYKSTVKPALDSFAEDIRRSSMMKLEELI 420

Query: 452 SLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKKMVEDVQ 511
           SLRQQSSENTAKI+SKRN IASLQS INE ET+LISLK+E+RDY LRCSTESKKMVED Q
Sbjct: 421 SLRQQSSENTAKIDSKRNQIASLQSHINEHETKLISLKDEMRDYILRCSTESKKMVEDFQ 480

Query: 512 QEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKAFVRSKI 571
           QEAHNLDLVE EA ESLKNAKL +QEA KQ EEEI MCAREL+ C+DS SQYKA V  KI
Sbjct: 481 QEAHNLDLVEGEAEESLKNAKLANQEATKQEEEEIHMCARELLSCLDSVSQYKAVVSCKI 540

Query: 572 LDMKSCLSNAAAGISEAFKNSINAE 597
            DM+SCLS AAAGISEAFKNS+  E
Sbjct: 541 SDMESCLSKAAAGISEAFKNSMPVE 565

[Close]
BLAST of Lsi05G001950 vs. NCBI nr
Match: gi|225455018|ref|XP_002279662.1| (PREDICTED: kinetochore protein ndc80 [Vitis vinifera])

HSP 1 Score: 605.5 bits (1560), Expect = 9.9e-170
Identity = 336/571 (58.84%), Postives = 431/571 (75.48%), Query Frame = 1 

Query: 32  MKGTGRRRPKGSFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPAAASIDMYKE 91
           MK TGRRRPK SF PPPPP P      Q  RDSD SFA SRPSS+G+SR +A   D   +
Sbjct: 1   MKATGRRRPKDSFRPPPPPPPSVDHHRQLSRDSDASFAGSRPSSLGISRSSAG--DALTD 60

Query: 92  RAVQISAVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDL 151
           R+ Q+SA+ TINS L    S+S  ++ KP   PS KD++ET+  L+  LD+  TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 120

Query: 152 PIVLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDV 211
           PI+LK L  P K+NK+ LK P  PH W  +L ++HWLVQ+A+YN +L ++       ++ 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHAWPSLLGVMHWLVQIALYNDHLVSNLQCF---DNT 180

Query: 212 NIYVLNSYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRS 271
            +Y L+SYL YIRGDDD +EA+D+EFM +L++ RD   E +K LE+EV E E ++E LR 
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLERERDAVAEGVKALEKEVAEREGRLEELRL 240

Query: 272 DPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEE 331
            PS +EV+EK++ +LEEDVKKFH +I  +S ++  ++KILEEKEKEL VKV E N+ICEE
Sbjct: 241 GPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNRICEE 300

Query: 332 NEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKEL 391
           NEELKKRVE Q FN RD ERM+RELQAVERDI +AEV+RN WEEKSWDLD T+G+KFKEL
Sbjct: 301 NEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHKFKEL 360

Query: 392 EATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMT 451
           EA +IECNQA++RLKL N  QYVLNAKGS+PA+V+GIDYK+T++PALDSFA+DI +SSM+
Sbjct: 361 EALSIECNQALRRLKLGNGLQYVLNAKGSSPAEVLGIDYKSTLKPALDSFADDINKSSMS 420

Query: 452 KLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKK 511
           KLEELISL+QQS EN AKIE+KRN +A+LQS  +E E +LI LK E ++YT RC+TE+KK
Sbjct: 421 KLEELISLQQQSVENAAKIEAKRNRLAALQSSSDEVEAQLIFLKKESQNYTSRCATEAKK 480

Query: 512 MVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKA 571
           +VEDV+ E HN+D+VERE  + L+ +KL  QEAIKQ EEEIQMCA EL   VDS S+YK 
Sbjct: 481 LVEDVEIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQMCAWELYALVDSVSKYKE 540

Query: 572 FVRSKILDMKSCLSNAAAGISEAFKNSINAE 597
            + SKI +MK  LS  A  +S+++K S+ A+
Sbjct: 541 HMASKISEMKCNLSETAGAVSDSYKGSLLAQ 562

[Close]
BLAST of Lsi05G001950 vs. NCBI nr
Match: gi|225448101|ref|XP_002273942.1| (PREDICTED: kinetochore protein ndc80-like [Vitis vinifera])

HSP 1 Score: 602.1 bits (1551), Expect = 1.1e-168
Identity = 334/571 (58.49%), Postives = 431/571 (75.48%), Query Frame = 1 

Query: 32  MKGTGRRRPKGSFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPAAASIDMYKE 91
           MK TGRRRPK S  PPPPP P      QF RDSD SFASSRPSS+G++R +A   D   +
Sbjct: 1   MKATGRRRPKDSIRPPPPPAPSVDHHRQFSRDSDASFASSRPSSLGINRSSAG--DALTD 60

Query: 92  RAVQISAVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDL 151
           R+ Q+SA+ TINS L    S+S  ++ KP   PS KD++ET+  L+  LD+  TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 120

Query: 152 PIVLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDV 211
           PI+LK L  P K+NK+ LK P  PH W  +L ++HWLVQ+A+YN +L ++       ++ 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHAWPPLLGVMHWLVQIALYNDHLVSNLQCF---DNT 180

Query: 212 NIYVLNSYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRS 271
            +Y L+SYL YIRGDDD +EA+D+EFM +L+K RD   E +K LE+EV E E ++E LRS
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLEKERDAVAEGVKALEKEVAEREGRLEELRS 240

Query: 272 DPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEE 331
            PS +EV+EK + +LEEDVKKFH +I  +S ++  ++KILEEKEKEL VKV E N+ICEE
Sbjct: 241 GPSAKEVVEKVRGVLEEDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNRICEE 300

Query: 332 NEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKEL 391
           NEELKKRVE Q FN RD ERM+RELQAVERDI +AEV+RN WEEKSWDLD T+G+KFKEL
Sbjct: 301 NEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHKFKEL 360

Query: 392 EATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMT 451
           EA +IECNQA++RLKL N  QYVLNAKGS+P +V+GIDYK+ ++PALDSFA+DI +SSM+
Sbjct: 361 EALSIECNQALRRLKLGNGLQYVLNAKGSSPTEVLGIDYKSALKPALDSFADDINKSSMS 420

Query: 452 KLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKK 511
           KLEELISL+QQS EN AKIE+KRN +A+LQS+ +E E +L  LK E ++YT RC+ E+KK
Sbjct: 421 KLEELISLQQQSVENAAKIEAKRNRLAALQSRSDEVEAQLNFLKKETQNYTSRCAMEAKK 480

Query: 512 MVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKA 571
           +VEDV+ E HN+D+VERE  + L+ +KL  QEAIKQ EEEIQ+CA EL   VDS S+YK 
Sbjct: 481 LVEDVEIETHNVDIVEREVADVLETSKLKLQEAIKQNEEEIQICAWELYALVDSVSKYKE 540

Query: 572 FVRSKILDMKSCLSNAAAGISEAFKNSINAE 597
            + SKI +MKS LS  A  +S+++K S++A+
Sbjct: 541 HMASKISEMKSNLSETAGAVSDSYKGSLSAQ 562

[Close]
BLAST of Lsi05G001950 vs. NCBI nr
Match: gi|147771819|emb|CAN66776.1| (hypothetical protein VITISV_035303 [Vitis vinifera])

HSP 1 Score: 599.0 bits (1543), Expect = 9.2e-168
Identity = 334/571 (58.49%), Postives = 428/571 (74.96%), Query Frame = 1 

Query: 32  MKGTGRRRPKGSFNPPPPPTP------QFRRDSDVSFASSRPSSIGMSRPAAASIDMYKE 91
           MK TGRRRPK S  PPPPP P      QF RDSD SFASSRPSS+G++R +A   D   +
Sbjct: 1   MKATGRRRPKDSIRPPPPPAPSVDHHRQFSRDSDASFASSRPSSLGINRSSAG--DALTD 60

Query: 92  RAVQISAVNTINSSLKELFSNSYNVTFKPFSPPSLKDLTETINLLLHCLDYTPTKLEDDL 151
           R+ Q+SA+ TINS L    S+S  ++ KP   PS KD++ET+  L+  LD+  TKLEDDL
Sbjct: 61  RSYQLSAIRTINSFLA---SHSSPLSLKP-PLPSAKDISETLKFLISQLDFPTTKLEDDL 120

Query: 152 PIVLKSLGYPFKINKNILKNPPAPHQWYQILALLHWLVQVAVYNYNLANDSDSIITSNDV 211
           PI+LK L  P K+NK+ LK P  PH W  +L ++HWLVQ+A+YN +L ++       ++ 
Sbjct: 121 PILLKHLNCPIKLNKSALKAPGTPHAWPPLLGVMHWLVQIALYNDHLVSNLQCF---DNT 180

Query: 212 NIYVLNSYLQYIRGDDDSVEALDQEFMERLKKGRDDAFESLKVLEEEVKELEAKVEALRS 271
            +Y L+SYL YIRGDDD +EA+D+EFM +L+  RD   E +K LE+EV E E ++E LRS
Sbjct: 181 FVYALDSYLHYIRGDDDGMEAVDREFMGKLEXERDAVAEGVKALEKEVAEREGRLEELRS 240

Query: 272 DPSQREVLEKQQSLLEEDVKKFHTMITGYSEKMEDMKKILEEKEKELEVKVHERNKICEE 331
            PS +EV+EK++ +LEEDVKKFH +I  +S ++  ++KILEEKEKEL VKV E N+ICEE
Sbjct: 241 GPSAKEVVEKERGVLEEDVKKFHAIIAEFSGRIASVEKILEEKEKELGVKVEENNRICEE 300

Query: 332 NEELKKRVESQLFNPRDVERMRRELQAVERDIGDAEVSRNTWEEKSWDLDATLGNKFKEL 391
           NEELKKRVE Q FN RD ERM+RELQAVERDI +AEV+RN WEEKSWDLD T+G+KFKEL
Sbjct: 301 NEELKKRVELQTFNARDAERMKRELQAVERDITEAEVARNGWEEKSWDLDTTIGHKFKEL 360

Query: 392 EATAIECNQAMKRLKLDNCHQYVLNAKGSTPADVMGIDYKTTVRPALDSFAEDIRRSSMT 451
           EA +IECNQA++RLKL N  QYVLNAKGS+P +V+GIDYK+ ++PALDSFA+DI +SSM+
Sbjct: 361 EALSIECNQALRRLKLGNGLQYVLNAKGSSPXEVLGIDYKSXLKPALDSFADDINKSSMS 420

Query: 452 KLEELISLRQQSSENTAKIESKRNHIASLQSQINEDETRLISLKNEIRDYTLRCSTESKK 511
           KLEELISL+QQS EN AKIE+KRN +A+LQS  +E E +LI LK E ++YT RC+TE+KK
Sbjct: 421 KLEELISLQQQSVENAAKIEAKRNRLAALQSXSDEVEAQLIFLKKESQNYTSRCATEAKK 480

Query: 512 MVEDVQQEAHNLDLVEREAGESLKNAKLTHQEAIKQGEEEIQMCARELVLCVDSGSQYKA 571
           +VEDV+ E HN+D VERE  + L+ +KL  QEAIKQ EEEIQ CA EL   VDS S+YK 
Sbjct: 481 LVEDVEIETHNVDXVEREVADVLETSKLKLQEAIKQNEEEIQXCAWELYALVDSVSKYKE 540

Query: 572 FVRSKILDMKSCLSNAAAGISEAFKNSINAE 597
            + SKI +MK  LS  A  +S+++K S+ A+
Sbjct: 541 HMASKISEMKCNLSETAGAVSDSYKGSLLAQ 562

The following BLAST results are available for this feature:
BLAST of Lsi05G001950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDC80_MACFA3.9e-1724.26Kinetochore protein NDC80 homolog OS=Macaca fascicularis GN=NDC80 PE=2 SV=1[more]
NDC80_DANRE3.7e-1524.45Kinetochore protein NDC80 homolog OS=Danio rerio GN=ndc80 PE=2 SV=1[more]
NDC80_HUMAN3.7e-1520.81Kinetochore protein NDC80 homolog OS=Homo sapiens GN=NDC80 PE=1 SV=1[more]
NDC80_CHICK1.5e-1323.51Kinetochore protein NDC80 homolog OS=Gallus gallus GN=NDC80 PE=1 SV=1[more]
NDC80_XENLA1.3e-1220.78Kinetochore protein NDC80 homolog OS=Xenopus laevis GN=ndc80 PE=1 SV=2[more]
BLAST of Lsi05G001950 vs. TrEMBL
Match NameE-valueIdentityDescription
F6I2P0_VITVI6.9e-17058.84Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0013g00940 PE=4 SV=... [more]
F6H969_VITVI7.6e-16958.49Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g00950 PE=4 SV=... [more]
A5AI77_VITVI6.4e-16858.49Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035303 PE=4 SV=1[more]
M5XWK4_PRUPE3.8e-16056.56Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003403mg PE=4 SV=1[more]
A5ANM2_VITVI1.1e-15655.99Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041326 PE=4 SV=1[more]
BLAST of Lsi05G001950 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G54630.11.0e-11642.73 Kinetochore protein Ndc80 (InterPro:IPR005550)[more]
BLAST of Lsi05G001950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680142|ref|XP_004149971.2|3.0e-27589.03PREDICTED: kinetochore protein NDC80 homolog [Cucumis sativus][more]
gi|659077518|ref|XP_008439248.1|9.9e-27187.96PREDICTED: kinetochore protein NDC80 homolog [Cucumis melo][more]
gi|225455018|ref|XP_002279662.1|9.9e-17058.84PREDICTED: kinetochore protein ndc80 [Vitis vinifera][more]
gi|225448101|ref|XP_002273942.1|1.1e-16858.49PREDICTED: kinetochore protein ndc80-like [Vitis vinifera][more]
gi|147771819|emb|CAN66776.1|9.2e-16858.49hypothetical protein VITISV_035303 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005550Kinetochore_Ndc80
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051315 attachment of mitotic spindle microtubules to kinetochore
biological_process GO:0000132 establishment of mitotic spindle orientation
biological_process GO:0044710 single-organism metabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0032259 methylation
biological_process GO:0044260 cellular macromolecule metabolic process
biological_process GO:0022402 cell cycle process
biological_process GO:1902589 single-organism organelle organization
biological_process GO:0008150 biological_process
biological_process GO:0007052 mitotic spindle organization
cellular_component GO:0031262 Ndc80 complex
cellular_component GO:0016020 membrane
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0000778 condensed nuclear chromosome kinetochore
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005200 structural constituent of cytoskeleton
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G001950.1Lsi05G001950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005550Kinetochore protein Ndc80PANTHERPTHR10643KINETOCHORE PROTEIN NDC80coord: 38..596
score: 2.8E
IPR005550Kinetochore protein Ndc80PFAMPF03801Ndc80_HECcoord: 81..194
score: 6.4
NoneNo IPR availableunknownCoilCoilcoord: 291..325
score: -coord: 464..498
score: -coord: 343..370
score: -coord: 382..402
score: -coord: 232..266
scor
NoneNo IPR availablePANTHERPTHR10643:SF2KINETOCHORE PROTEIN NDC80 HOMOLOGcoord: 38..596
score: 2.8E