Csa3G150760 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G150760
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 10265066 .. 10265563 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTATGATCATGGTCGCCAGAAACCAAAGCAAGCATTTTTTAATGAAAATTGGGAAATGATAGAAATCAAATTCAACTCAGAAGTGATGAAATTTTCGAAACTTTTTGTTGTACCTACCAAGGAAAACTTCACCACAGCTGGACTCAGACAGGGATGGTATCAGAAAAGTCTTCTCTCACATCGTAATGTCCTTTCTGAAACAGAGAGTTTTGTCATTCTCAAGAGTCAAGTTGAATTGGAAGTTATTTTTCTAAGTTCAGTGGAAGTAGTTGGTTCCCTTTTGGTTTATCTGGAAAAAAGGAGCTCAACAATACTTCACCATTGTCAACCTTATTCTCAAGTAATGGGGTAGTTGCTCCTTGTTTTTATGCTATCATGTTATGTTTCTCACTCTTCACACTGTAACTCCCTACTTTTTAGTTGGGCTGTTGGTGGCATCTCTATAGATGACCATATGACTTGCTGTGTCTCAAAGATCAAAGGGGAAACTTAG

mRNA sequence

ATGAAGTATGATCATGGTCGCCAGAAACCAAAGCAAGCATTTTTTAATGAAAATTGGGAAATGATAGAAATCAAATTCAACTCAGAAGTGATGAAATTTTCGAAACTTTTTGTTGTACCTACCAAGGAAAACTTCACCACAGCTGGACTCAGACAGGGATGGTATCAGAAAAGTCTTCTCTCACATCGTAATGTCCTTTCTGAAACAGAGAGTTTTGTCATTCTCAAGAGTCAAGTTGAATTGGAAGTTATTTTTCTAAGTTCAGTGGAAGTAGTTGGTTCCCTTTTGGTTTATCTGGAAAAAAGGAGCTCAACAATACTTCACCATTGTCAACCTTATTCTCAAGTAATGGGTTGGGCTGTTGGTGGCATCTCTATAGATGACCATATGACTTGCTGTGTCTCAAAGATCAAAGGGGAAACTTAG

Coding sequence (CDS)

ATGAAGTATGATCATGGTCGCCAGAAACCAAAGCAAGCATTTTTTAATGAAAATTGGGAAATGATAGAAATCAAATTCAACTCAGAAGTGATGAAATTTTCGAAACTTTTTGTTGTACCTACCAAGGAAAACTTCACCACAGCTGGACTCAGACAGGGATGGTATCAGAAAAGTCTTCTCTCACATCGTAATGTCCTTTCTGAAACAGAGAGTTTTGTCATTCTCAAGAGTCAAGTTGAATTGGAAGTTATTTTTCTAAGTTCAGTGGAAGTAGTTGGTTCCCTTTTGGTTTATCTGGAAAAAAGGAGCTCAACAATACTTCACCATTGTCAACCTTATTCTCAAGTAATGGGTTGGGCTGTTGGTGGCATCTCTATAGATGACCATATGACTTGCTGTGTCTCAAAGATCAAAGGGGAAACTTAG

Protein sequence

MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLLSHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWAVGGISIDDHMTCCVSKIKGET*
Homology
[Close]
BLAST of Csa3G150760 vs. TrEMBL
Match: A0A0A0L8W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150760 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 5.8e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1 

Query: 1   MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60
           MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL
Sbjct: 1   MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60

Query: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA 120
           SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA
Sbjct: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA 120

Query: 121 VGGISIDDHMTCCVSKIKGET 142
           VGGISIDDHMTCCVSKIKGET
Sbjct: 121 VGGISIDDHMTCCVSKIKGET 141

[Close]
BLAST of Csa3G150760 vs. NCBI nr
Match: gi|700201914|gb|KGN57047.1| (hypothetical protein Csa_3G150760 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 8.3e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1 

Query: 1   MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60
           MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL
Sbjct: 1   MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60

Query: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA 120
           SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA
Sbjct: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA 120

Query: 121 VGGISIDDHMTCCVSKIKGET 142
           VGGISIDDHMTCCVSKIKGET
Sbjct: 121 VGGISIDDHMTCCVSKIKGET 141

The following BLAST results are available for this feature:
BLAST of Csa3G150760 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8W3_CUCSA5.8e-75100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150760 PE=4 SV=1[more]
BLAST of Csa3G150760 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201914|gb|KGN57047.1|8.3e-75100.00hypothetical protein Csa_3G150760 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G150760.1Csa3G150760.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G150760ClCG05G005610Watermelon (Charleston Gray)cuwcgB222
Csa3G150760Cla97C05G087020Watermelon (97103) v2cuwmbB204
Csa3G150760CSPI03G13720Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G150760Watermelon (97103) v2cuwmbB231
Csa3G150760Wax gourdcuwgoB258
Csa3G150760Wax gourdcuwgoB269
Csa3G150760Cucumber (Chinese Long) v2cucuB113
Csa3G150760Cucumber (Gy14) v1cgycuB366
Csa3G150760Cucumber (Gy14) v1cgycuB510
Csa3G150760Cucurbita maxima (Rimu)cmacuB253
Csa3G150760Cucurbita maxima (Rimu)cmacuB355
Csa3G150760Cucurbita maxima (Rimu)cmacuB814
Csa3G150760Cucurbita maxima (Rimu)cmacuB885
Csa3G150760Cucurbita moschata (Rifu)cmocuB239
Csa3G150760Cucurbita moschata (Rifu)cmocuB345
Csa3G150760Cucurbita moschata (Rifu)cmocuB806
Csa3G150760Cucurbita moschata (Rifu)cmocuB872
Csa3G150760Melon (DHL92) v3.5.1cumeB180
Csa3G150760Melon (DHL92) v3.5.1cumeB236
Csa3G150760Watermelon (Charleston Gray)cuwcgB247
Csa3G150760Watermelon (97103) v1cuwmB233
Csa3G150760Watermelon (97103) v1cuwmB279
Csa3G150760Cucurbita pepo (Zucchini)cpecuB132
Csa3G150760Cucurbita pepo (Zucchini)cpecuB310
Csa3G150760Cucurbita pepo (Zucchini)cpecuB609
Csa3G150760Cucurbita pepo (Zucchini)cpecuB859
Csa3G150760Bottle gourd (USVL1VR-Ls)culsiB150
Csa3G150760Bottle gourd (USVL1VR-Ls)culsiB199
Csa3G150760Cucumber (Gy14) v2cgybcuB109
Csa3G150760Cucumber (Gy14) v2cgybcuB258
Csa3G150760Melon (DHL92) v3.6.1cumedB165
Csa3G150760Melon (DHL92) v3.6.1cumedB223
Csa3G150760Silver-seed gourdcarcuB0071
Csa3G150760Silver-seed gourdcarcuB0350
Csa3G150760Silver-seed gourdcarcuB0633
Csa3G150760Silver-seed gourdcarcuB0854