Csa3G150760.1 (mRNA) Cucumber (Chinese Long) v2

Overview
NameCsa3G150760.1
TypemRNA
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 10265066 .. 10265563 (+)
Sequence length426
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTATGATCATGGTCGCCAGAAACCAAAGCAAGCATTTTTTAATGAAAATTGGGAAATGATAGAAATCAAATTCAACTCAGAAGTGATGAAATTTTCGAAACTTTTTGTTGTACCTACCAAGGAAAACTTCACCACAGCTGGACTCAGACAGGGATGGTATCAGAAAAGTCTTCTCTCACATCGTAATGTCCTTTCTGAAACAGAGAGTTTTGTCATTCTCAAGAGTCAAGTTGAATTGGAAGTTATTTTTCTAAGTTCAGTGGAAGTAGTTGGTTCCCTTTTGGTTTATCTGGAAAAAAGGAGCTCAACAATACTTCACCATTGTCAACCTTATTCTCAAGTAATGGGGTAGTTGCTCCTTGTTTTTATGCTATCATGTTATGTTTCTCACTCTTCACACTGTAACTCCCTACTTTTTAGTTGGGCTGTTGGTGGCATCTCTATAGATGACCATATGACTTGCTGTGTCTCAAAGATCAAAGGGGAAACTTAG

mRNA sequence

ATGAAGTATGATCATGGTCGCCAGAAACCAAAGCAAGCATTTTTTAATGAAAATTGGGAAATGATAGAAATCAAATTCAACTCAGAAGTGATGAAATTTTCGAAACTTTTTGTTGTACCTACCAAGGAAAACTTCACCACAGCTGGACTCAGACAGGGATGGTATCAGAAAAGTCTTCTCTCACATCGTAATGTCCTTTCTGAAACAGAGAGTTTTGTCATTCTCAAGAGTCAAGTTGAATTGGAAGTTATTTTTCTAAGTTCAGTGGAAGTAGTTGGTTCCCTTTTGGTTTATCTGGAAAAAAGGAGCTCAACAATACTTCACCATTGTCAACCTTATTCTCAAGTAATGGGTTGGGCTGTTGGTGGCATCTCTATAGATGACCATATGACTTGCTGTGTCTCAAAGATCAAAGGGGAAACTTAG

Coding sequence (CDS)

ATGAAGTATGATCATGGTCGCCAGAAACCAAAGCAAGCATTTTTTAATGAAAATTGGGAAATGATAGAAATCAAATTCAACTCAGAAGTGATGAAATTTTCGAAACTTTTTGTTGTACCTACCAAGGAAAACTTCACCACAGCTGGACTCAGACAGGGATGGTATCAGAAAAGTCTTCTCTCACATCGTAATGTCCTTTCTGAAACAGAGAGTTTTGTCATTCTCAAGAGTCAAGTTGAATTGGAAGTTATTTTTCTAAGTTCAGTGGAAGTAGTTGGTTCCCTTTTGGTTTATCTGGAAAAAAGGAGCTCAACAATACTTCACCATTGTCAACCTTATTCTCAAGTAATGGGTTGGGCTGTTGGTGGCATCTCTATAGATGACCATATGACTTGCTGTGTCTCAAAGATCAAAGGGGAAACTTAG

Protein sequence

MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLLSHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWAVGGISIDDHMTCCVSKIKGET*
Homology
[Close]
BLAST of Csa3G150760.1 vs. TrEMBL
Match: A0A0A0L8W3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150760 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 5.8e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1 

Query: 1   MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60
           MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL
Sbjct: 1   MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60

Query: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA 120
           SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA
Sbjct: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA 120

Query: 121 VGGISIDDHMTCCVSKIKGET 142
           VGGISIDDHMTCCVSKIKGET
Sbjct: 121 VGGISIDDHMTCCVSKIKGET 141

[Close]
BLAST of Csa3G150760.1 vs. NCBI nr
Match: gi|700201914|gb|KGN57047.1| (hypothetical protein Csa_3G150760 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 8.3e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 1 

Query: 1   MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60
           MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL
Sbjct: 1   MKYDHGRQKPKQAFFNENWEMIEIKFNSEVMKFSKLFVVPTKENFTTAGLRQGWYQKSLL 60

Query: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA 120
           SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA
Sbjct: 61  SHRNVLSETESFVILKSQVELEVIFLSSVEVVGSLLVYLEKRSSTILHHCQPYSQVMGWA 120

Query: 121 VGGISIDDHMTCCVSKIKGET 142
           VGGISIDDHMTCCVSKIKGET
Sbjct: 121 VGGISIDDHMTCCVSKIKGET 141

The following BLAST results are available for this feature:
BLAST of Csa3G150760.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8W3_CUCSA5.8e-75100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G150760 PE=4 SV=1[more]
BLAST of Csa3G150760.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201914|gb|KGN57047.1|8.3e-75100.00hypothetical protein Csa_3G150760 [Cucumis sativus][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Csa3G150760Csa3G150760gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Csa3G150760.1Csa3G150760.1-proteinpolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Csa3G150760.1.cds1Csa3G150760.1.cds1CDS
Csa3G150760.1.cds2Csa3G150760.1.cds2CDS