Csa3G141800 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa3G141800
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 9282842 .. 9283165 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGGCGGAGAGGATCCATGGGAGATCGAGGCCATTGGAGAAGAATTTGCCTTGGGATGTTGTTATTAGAACGGAGCCAGGGGAAGCTCTGGCTTCGGCTTTGACTTGGGACAGAGCATTGAGTATGGAGTTTATTAAAGATGGGTTCAGCCAGTGCTCGTGGTTGCCGGTTAGTGTTAGAATGAACAGCTTCCCTCGCTTCTCCATACTGCACATTTTCGTAAGGAAGCTTTCCGGCAGCTTCACAATCAATGACCAGATTCCAAATCAATGTAAATTTAAACACTGCAACCGATACCCATTACGACAGGAGAGGTGA

mRNA sequence

ATGGAGGAGGCGGAGAGGATCCATGGGAGATCGAGGCCATTGGAGAAGAATTTGCCTTGGGATGTTGTTATTAGAACGGAGCCAGGGGAAGCTCTGGCTTCGGCTTTGACTTGGGACAGAGCATTGAGTATGGAGTTTATTAAAGATGGGTTCAGCCAGTGCTCGTGGTTGCCGGTTAGTGTTAGAATGAACAGCTTCCCTCGCTTCTCCATACTGCACATTTTCGTAAGGAAGCTTTCCGGCAGCTTCACAATCAATGACCAGATTCCAAATCAATGTAAATTTAAACACTGCAACCGATACCCATTACGACAGGAGAGGTGA

Coding sequence (CDS)

ATGGAGGAGGCGGAGAGGATCCATGGGAGATCGAGGCCATTGGAGAAGAATTTGCCTTGGGATGTTGTTATTAGAACGGAGCCAGGGGAAGCTCTGGCTTCGGCTTTGACTTGGGACAGAGCATTGAGTATGGAGTTTATTAAAGATGGGTTCAGCCAGTGCTCGTGGTTGCCGGTTAGTGTTAGAATGAACAGCTTCCCTCGCTTCTCCATACTGCACATTTTCGTAAGGAAGCTTTCCGGCAGCTTCACAATCAATGACCAGATTCCAAATCAATGTAAATTTAAACACTGCAACCGATACCCATTACGACAGGAGAGGTGA

Protein sequence

MEEAERIHGRSRPLEKNLPWDVVIRTEPGEALASALTWDRALSMEFIKDGFSQCSWLPVSVRMNSFPRFSILHIFVRKLSGSFTINDQIPNQCKFKHCNRYPLRQER*
Homology
[Close]
BLAST of Csa3G141800 vs. TrEMBL
Match: A0A0A0L773_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141800 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.7e-56
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1 

Query: 1   MEEAERIHGRSRPLEKNLPWDVVIRTEPGEALASALTWDRALSMEFIKDGFSQCSWLPVS 60
           MEEAERIHGRSRPLEKNLPWDVVIRTEPGEALASALTWDRALSMEFIKDGFSQCSWLPVS
Sbjct: 1   MEEAERIHGRSRPLEKNLPWDVVIRTEPGEALASALTWDRALSMEFIKDGFSQCSWLPVS 60

Query: 61  VRMNSFPRFSILHIFVRKLSGSFTINDQIPNQCKFKHCNRYPLRQER 108
           VRMNSFPRFSILHIFVRKLSGSFTINDQIPNQCKFKHCNRYPLRQER
Sbjct: 61  VRMNSFPRFSILHIFVRKLSGSFTINDQIPNQCKFKHCNRYPLRQER 107

[Close]
BLAST of Csa3G141800 vs. NCBI nr
Match: gi|700201751|gb|KGN56884.1| (hypothetical protein Csa_3G141800 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 3.8e-56
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 1 

Query: 1   MEEAERIHGRSRPLEKNLPWDVVIRTEPGEALASALTWDRALSMEFIKDGFSQCSWLPVS 60
           MEEAERIHGRSRPLEKNLPWDVVIRTEPGEALASALTWDRALSMEFIKDGFSQCSWLPVS
Sbjct: 1   MEEAERIHGRSRPLEKNLPWDVVIRTEPGEALASALTWDRALSMEFIKDGFSQCSWLPVS 60

Query: 61  VRMNSFPRFSILHIFVRKLSGSFTINDQIPNQCKFKHCNRYPLRQER 108
           VRMNSFPRFSILHIFVRKLSGSFTINDQIPNQCKFKHCNRYPLRQER
Sbjct: 61  VRMNSFPRFSILHIFVRKLSGSFTINDQIPNQCKFKHCNRYPLRQER 107

The following BLAST results are available for this feature:
BLAST of Csa3G141800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L773_CUCSA2.7e-56100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G141800 PE=4 SV=1[more]
BLAST of Csa3G141800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201751|gb|KGN56884.1|3.8e-56100.00hypothetical protein Csa_3G141800 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G141800.1Csa3G141800.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G141800ClCG05G004450Watermelon (Charleston Gray)cuwcgB222
Csa3G141800Lsi05G017000Bottle gourd (USVL1VR-Ls)culsiB209
Csa3G141800CSPI03G12210Wild cucumber (PI 183967)cpicuB120
Csa3G141800CmaCh14G017950Cucurbita maxima (Rimu)cmacuB253
Csa3G141800Cp4.1LG03g09990Cucurbita pepo (Zucchini)cpecuB609
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G141800Wax gourdcuwgoB251
Csa3G141800Wax gourdcuwgoB303
Csa3G141800Wax gourdcuwgoB311
Csa3G141800Cucumber (Chinese Long) v2cucuB050
Csa3G141800Cucumber (Gy14) v1cgycuB366
Csa3G141800Cucumber (Gy14) v1cgycuB537
Csa3G141800Cucurbita maxima (Rimu)cmacuB002
Csa3G141800Cucurbita maxima (Rimu)cmacuB814
Csa3G141800Cucurbita maxima (Rimu)cmacuB885
Csa3G141800Cucurbita moschata (Rifu)cmocuB239
Csa3G141800Cucurbita moschata (Rifu)cmocuB509
Csa3G141800Cucurbita moschata (Rifu)cmocuB806
Csa3G141800Cucurbita moschata (Rifu)cmocuB872
Csa3G141800Melon (DHL92) v3.5.1cumeB236
Csa3G141800Watermelon (Charleston Gray)cuwcgB246
Csa3G141800Watermelon (Charleston Gray)cuwcgB255
Csa3G141800Watermelon (97103) v1cuwmB221
Csa3G141800Watermelon (97103) v1cuwmB233
Csa3G141800Watermelon (97103) v1cuwmB279
Csa3G141800Cucurbita pepo (Zucchini)cpecuB310
Csa3G141800Cucurbita pepo (Zucchini)cpecuB724
Csa3G141800Cucurbita pepo (Zucchini)cpecuB859
Csa3G141800Bottle gourd (USVL1VR-Ls)culsiB150
Csa3G141800Bottle gourd (USVL1VR-Ls)culsiB215
Csa3G141800Cucumber (Gy14) v2cgybcuB065
Csa3G141800Cucumber (Gy14) v2cgybcuB109
Csa3G141800Melon (DHL92) v3.6.1cumedB220
Csa3G141800Melon (DHL92) v3.6.1cumedB223
Csa3G141800Silver-seed gourdcarcuB0256
Csa3G141800Silver-seed gourdcarcuB0262
Csa3G141800Silver-seed gourdcarcuB0795
Csa3G141800Silver-seed gourdcarcuB0975
Csa3G141800Silver-seed gourdcarcuB1093
Csa3G141800Watermelon (97103) v2cuwmbB204
Csa3G141800Watermelon (97103) v2cuwmbB231
Csa3G141800Watermelon (97103) v2cuwmbB241