Csa3G119800 (gene) Cucumber (Chinese Long) v2

NameCsa3G119800
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr3 : 6895054 .. 6895221 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAACCTTGTAAAAGGCCTCCTGAGCAGGCAGCTGAAAATGGGGTAAGGGCAGATTCGATGAAGAACCCTCAGATGCAAGTGGAAAAGCAAAAGGGAGTGAAGGAAATGAGAAACAGAGCAACCCCTTTTATCATTCAAGCAGTGGAATCAGAATGGGGATGA

mRNA sequence

ATGAACAAACCTTGTAAAAGGCCTCCTGAGCAGGCAGCTGAAAATGGGGTAAGGGCAGATTCGATGAAGAACCCTCAGATGCAAGTGGAAAAGCAAAAGGGAGTGAAGGAAATGAGAAACAGAGCAACCCCTTTTATCATTCAAGCAGTGGAATCAGAATGGGGATGA

Coding sequence (CDS)

ATGAACAAACCTTGTAAAAGGCCTCCTGAGCAGGCAGCTGAAAATGGGGTAAGGGCAGATTCGATGAAGAACCCTCAGATGCAAGTGGAAAAGCAAAAGGGAGTGAAGGAAATGAGAAACAGAGCAACCCCTTTTATCATTCAAGCAGTGGAATCAGAATGGGGATGA

Protein sequence

MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG*
BLAST of Csa3G119800 vs. TrEMBL
Match: A0A0A0L5Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119800 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 9.1e-24
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1

Query: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 56
          MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG
Sbjct: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 55

BLAST of Csa3G119800 vs. NCBI nr
Match: gi|700201316|gb|KGN56449.1| (hypothetical protein Csa_3G119800 [Cucumis sativus])

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1

Query: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 56
          MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG
Sbjct: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L5Z7_CUCSA9.1e-24100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119800 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|700201316|gb|KGN56449.1|1.3e-23100.00hypothetical protein Csa_3G119800 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU102722cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa3G119800.1Csa3G119800.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU102722CU102722transcribed_cluster


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa3G119800MELO3C006048Melon (DHL92) v3.5.1cumeB236
Csa3G119800MELO3C006048.2Melon (DHL92) v3.6.1cumedB223
Csa3G119800CSPI03G08160Wild cucumber (PI 183967)cpicuB120
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa3G119800Cucumber (Gy14) v2cgybcuB109
Csa3G119800Cucumber (Gy14) v2cgybcuB163
Csa3G119800Cucumber (Gy14) v2cgybcuB206
Csa3G119800Melon (DHL92) v3.6.1cumedB157
Csa3G119800Melon (DHL92) v3.6.1cumedB245
Csa3G119800Melon (DHL92) v3.6.1cumedB246
Csa3G119800Silver-seed gourdcarcuB0522
Csa3G119800Silver-seed gourdcarcuB1007
Csa3G119800Watermelon (97103) v2cuwmbB204
Csa3G119800Watermelon (97103) v2cuwmbB173
Csa3G119800Watermelon (97103) v2cuwmbB224
Csa3G119800Wax gourdcuwgoB261
Csa3G119800Wax gourdcuwgoB284
Csa3G119800Wax gourdcuwgoB296
Csa3G119800Cucumber (Chinese Long) v2cucuB093
Csa3G119800Cucumber (Chinese Long) v2cucuB095
Csa3G119800Cucumber (Gy14) v1cgycuB128
Csa3G119800Cucumber (Gy14) v1cgycuB307
Csa3G119800Cucumber (Gy14) v1cgycuB366
Csa3G119800Cucurbita maxima (Rimu)cmacuB253
Csa3G119800Cucurbita maxima (Rimu)cmacuB285
Csa3G119800Cucurbita maxima (Rimu)cmacuB818
Csa3G119800Cucurbita maxima (Rimu)cmacuB829
Csa3G119800Cucurbita moschata (Rifu)cmocuB239
Csa3G119800Cucurbita moschata (Rifu)cmocuB271
Csa3G119800Cucurbita moschata (Rifu)cmocuB593
Csa3G119800Cucurbita moschata (Rifu)cmocuB806
Csa3G119800Melon (DHL92) v3.5.1cumeB175
Csa3G119800Melon (DHL92) v3.5.1cumeB254
Csa3G119800Melon (DHL92) v3.5.1cumeB257
Csa3G119800Watermelon (Charleston Gray)cuwcgB204
Csa3G119800Watermelon (Charleston Gray)cuwcgB222
Csa3G119800Watermelon (Charleston Gray)cuwcgB238
Csa3G119800Watermelon (97103) v1cuwmB233
Csa3G119800Watermelon (97103) v1cuwmB258
Csa3G119800Watermelon (97103) v1cuwmB252
Csa3G119800Cucurbita pepo (Zucchini)cpecuB038
Csa3G119800Cucurbita pepo (Zucchini)cpecuB609
Csa3G119800Cucurbita pepo (Zucchini)cpecuB720
Csa3G119800Cucurbita pepo (Zucchini)cpecuB862
Csa3G119800Bottle gourd (USVL1VR-Ls)culsiB151
Csa3G119800Bottle gourd (USVL1VR-Ls)culsiB209