CSPI03G08160 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI03G08160
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr3 : 6948420 .. 6948587 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAACCTTGTAAAAGGCCTCCTGAGCAGGCAGCTGAAAATGGGGTAAGGGCAGATTCGATGAAGAACCCTCAGATGCAAGTGGAAAAGCAAAAGGGAGTGAAGGAAATGAGAAACAGAGCAACCCCTTTTATCATTCAAGCAGTGGAATCAGAATGGGGATGA

mRNA sequence

ATGAACAAACCTTGTAAAAGGCCTCCTGAGCAGGCAGCTGAAAATGGGGTAAGGGCAGATTCGATGAAGAACCCTCAGATGCAAGTGGAAAAGCAAAAGGGAGTGAAGGAAATGAGAAACAGAGCAACCCCTTTTATCATTCAAGCAGTGGAATCAGAATGGGGATGA

Coding sequence (CDS)

ATGAACAAACCTTGTAAAAGGCCTCCTGAGCAGGCAGCTGAAAATGGGGTAAGGGCAGATTCGATGAAGAACCCTCAGATGCAAGTGGAAAAGCAAAAGGGAGTGAAGGAAATGAGAAACAGAGCAACCCCTTTTATCATTCAAGCAGTGGAATCAGAATGGGGATGA
Homology
[Close]
BLAST of CSPI03G08160 vs. TrEMBL
Match: A0A0A0L5Z7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119800 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.5e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 56
          MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG
Sbjct: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 55

[Close]
BLAST of CSPI03G08160 vs. NCBI nr
Match: gi|700201316|gb|KGN56449.1| (hypothetical protein Csa_3G119800 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 6.5e-23
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 1 

Query: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 56
          MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG
Sbjct: 1  MNKPCKRPPEQAAENGVRADSMKNPQMQVEKQKGVKEMRNRATPFIIQAVESEWG 55

The following BLAST results are available for this feature:
BLAST of CSPI03G08160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI03G08160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5Z7_CUCSA4.5e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G119800 PE=4 SV=1[more]
BLAST of CSPI03G08160 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI03G08160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201316|gb|KGN56449.1|6.5e-23100.00hypothetical protein Csa_3G119800 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G08160.1CSPI03G08160.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI03G08160Csa3G119800Cucumber (Chinese Long) v2cpicuB120
CSPI03G08160MELO3C006048Melon (DHL92) v3.5.1cpimeB230
CSPI03G08160MELO3C006048.2Melon (DHL92) v3.6.1cpimedB224
CSPI03G08160CsaV3_3G008310Cucumber (Chinese Long) v3cpicucB144
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI03G08160Watermelon (97103) v2cpiwmbB176
CSPI03G08160Watermelon (97103) v2cpiwmbB209
CSPI03G08160Watermelon (97103) v2cpiwmbB231
CSPI03G08160Wax gourdcpiwgoB261
CSPI03G08160Wax gourdcpiwgoB284
CSPI03G08160Wax gourdcpiwgoB296
CSPI03G08160Wild cucumber (PI 183967)cpicpiB108
CSPI03G08160Wild cucumber (PI 183967)cpicpiB110
CSPI03G08160Cucumber (Gy14) v1cgycpiB129
CSPI03G08160Cucumber (Gy14) v1cgycpiB320
CSPI03G08160Cucumber (Gy14) v1cgycpiB383
CSPI03G08160Cucurbita maxima (Rimu)cmacpiB255
CSPI03G08160Cucurbita maxima (Rimu)cmacpiB289
CSPI03G08160Cucurbita maxima (Rimu)cmacpiB830
CSPI03G08160Cucurbita maxima (Rimu)cmacpiB842
CSPI03G08160Cucurbita moschata (Rifu)cmocpiB243
CSPI03G08160Cucurbita moschata (Rifu)cmocpiB278
CSPI03G08160Cucurbita moschata (Rifu)cmocpiB599
CSPI03G08160Cucurbita moschata (Rifu)cmocpiB814
CSPI03G08160Cucumber (Chinese Long) v2cpicuB134
CSPI03G08160Cucumber (Chinese Long) v2cpicuB136
CSPI03G08160Melon (DHL92) v3.5.1cpimeB166
CSPI03G08160Melon (DHL92) v3.5.1cpimeB249
CSPI03G08160Melon (DHL92) v3.5.1cpimeB252
CSPI03G08160Watermelon (Charleston Gray)cpiwcgB206
CSPI03G08160Watermelon (Charleston Gray)cpiwcgB226
CSPI03G08160Watermelon (Charleston Gray)cpiwcgB246
CSPI03G08160Watermelon (97103) v1cpiwmB231
CSPI03G08160Watermelon (97103) v1cpiwmB251
CSPI03G08160Watermelon (97103) v1cpiwmB257
CSPI03G08160Cucurbita pepo (Zucchini)cpecpiB611
CSPI03G08160Cucurbita pepo (Zucchini)cpecpiB722
CSPI03G08160Cucurbita pepo (Zucchini)cpecpiB864
CSPI03G08160Bottle gourd (USVL1VR-Ls)cpilsiB150
CSPI03G08160Bottle gourd (USVL1VR-Ls)cpilsiB207
CSPI03G08160Melon (DHL92) v3.6.1cpimedB157
CSPI03G08160Melon (DHL92) v3.6.1cpimedB248
CSPI03G08160Cucumber (Gy14) v2cgybcpiB110
CSPI03G08160Cucumber (Gy14) v2cgybcpiB166
CSPI03G08160Cucumber (Gy14) v2cgybcpiB208
CSPI03G08160Silver-seed gourdcarcpiB0529
CSPI03G08160Silver-seed gourdcarcpiB1031
CSPI03G08160Cucumber (Chinese Long) v3cpicucB161
CSPI03G08160Cucumber (Chinese Long) v3cpicucB163