Csa3G001720 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa3G001720
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Zinc finger family protein; contains IPR007087 (Zinc finger, C2H2)
Location	Chr3 : 179752 .. 180480 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGAACACCAACACAAATGCCAATACCAATATCAATATCAACATTGATGCGGTATCCGAGACCTCTCCCGACCAACGCCACCGTCGAGAAAGGTCTCCAATGGCAGCTTCTCCACCACCACCTGCTCGCATTATCGATGACATAAATAACCCTCCCACTGATGTCATCGAACCCTCGTCCTCGATAGTAGTGGCGGCCCCGGAAAGCGTTACACCAGGCGACGTAAGACGGCGCCAAAGTGTAAACGCAATGTTCGACGTCGGAACATCATCACACGAGCACGTTGGAGGAAGTTCCGACGTCGAAGCGGGGAAAAAAAGAGGACGAGGGGATGGAGGAGAGCAGCAGCAGCAGGTGAAAGCTGCAAAGAAAAAAGGAGAGCTAACGGAGGTTCCAAAGGGTGAGCCAAGATGTGCAACATGTAACAAAGTGTTCAAATCGTGGAAAGCACTATTTGGACACTTAAGGTCTCACCCTGAACGGACCTACCGTGGAGCTCTTCCTCCGCCAACCGCCGCCGAACTTGACATTCGCCGTTGTCAGCAGCAGCTCGCTTCCACTTTGCTGACAGTAGCTCAGCAAGTGTCAGCGTCCAGAAGAGGGCTGGATATTGATCTCAACCAACCCTCTACTGCTGACGACGGTGACTCGCCGGACAACACCAGAGACGCCGGGTTTGATCTGAACCTCGAACCCCCGCCGGAGAGTGACGACGAGAAGTGA

mRNA sequence

ATGGAGAAGAACACCAACACAAATGCCAATACCAATATCAATATCAACATTGATGCGGTATCCGAGACCTCTCCCGACCAACGCCACCGTCGAGAAAGGTCTCCAATGGCAGCTTCTCCACCACCACCTGCTCGCATTATCGATGACATAAATAACCCTCCCACTGATGTCATCGAACCCTCGTCCTCGATAGTAGTGGCGGCCCCGGAAAGCGTTACACCAGGCGACGTAAGACGGCGCCAAAGTGTAAACGCAATGTTCGACGTCGGAACATCATCACACGAGCACGTTGGAGGAAGTTCCGACGTCGAAGCGGGGAAAAAAAGAGGACGAGGGGATGGAGGAGAGCAGCAGCAGCAGGTGAAAGCTGCAAAGAAAAAAGGAGAGCTAACGGAGGTTCCAAAGGGTGAGCCAAGATGTGCAACATGTAACAAAGTGTTCAAATCGTGGAAAGCACTATTTGGACACTTAAGGTCTCACCCTGAACGGACCTACCGTGGAGCTCTTCCTCCGCCAACCGCCGCCGAACTTGACATTCGCCGTTGTCAGCAGCAGCTCGCTTCCACTTTGCTGACAGTAGCTCAGCAAGTGTCAGCGTCCAGAAGAGGGCTGGATATTGATCTCAACCAACCCTCTACTGCTGACGACGGTGACTCGCCGGACAACACCAGAGACGCCGGGTTTGATCTGAACCTCGAACCCCCGCCGGAGAGTGACGACGAGAAGTGA

Coding sequence (CDS)

ATGGAGAAGAACACCAACACAAATGCCAATACCAATATCAATATCAACATTGATGCGGTATCCGAGACCTCTCCCGACCAACGCCACCGTCGAGAAAGGTCTCCAATGGCAGCTTCTCCACCACCACCTGCTCGCATTATCGATGACATAAATAACCCTCCCACTGATGTCATCGAACCCTCGTCCTCGATAGTAGTGGCGGCCCCGGAAAGCGTTACACCAGGCGACGTAAGACGGCGCCAAAGTGTAAACGCAATGTTCGACGTCGGAACATCATCACACGAGCACGTTGGAGGAAGTTCCGACGTCGAAGCGGGGAAAAAAAGAGGACGAGGGGATGGAGGAGAGCAGCAGCAGCAGGTGAAAGCTGCAAAGAAAAAAGGAGAGCTAACGGAGGTTCCAAAGGGTGAGCCAAGATGTGCAACATGTAACAAAGTGTTCAAATCGTGGAAAGCACTATTTGGACACTTAAGGTCTCACCCTGAACGGACCTACCGTGGAGCTCTTCCTCCGCCAACCGCCGCCGAACTTGACATTCGCCGTTGTCAGCAGCAGCTCGCTTCCACTTTGCTGACAGTAGCTCAGCAAGTGTCAGCGTCCAGAAGAGGGCTGGATATTGATCTCAACCAACCCTCTACTGCTGACGACGGTGACTCGCCGGACAACACCAGAGACGCCGGGTTTGATCTGAACCTCGAACCCCCGCCGGAGAGTGACGACGAGAAGTGA

Protein sequence

MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEPSSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDDEK*

Homology

[Close]

BLAST of Csa3G001720 vs. Swiss-Prot
Match: ZAT3_ARATH (Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07
Identity = 32/80 (40.00%), Postives = 36/80 (45.00%), Query Frame = 1


Query: 97  VGGSSDVEAGKKRGRGDGGEQQQQVKAAKK----KGELTEVPKGEPRCATCNKVFKSWKA 156
           +  S D    KKR +          K+A K    K      PK    C  C + F SWKA
Sbjct: 32  LSSSYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRKFWSWKA 91

Query: 157 LFGHLRSHPERTYRGALPPP 173
           LFGH+R HPER +RG  PPP
Sbjct: 92  LFGHMRCHPERQWRGINPPP 111

[Close]

BLAST of Csa3G001720 vs. TrEMBL
Match: A0A0A0L0X7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G001720 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 5.9e-136
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1


Query: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60
           MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60

Query: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120
           SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ
Sbjct: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120

Query: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180
           VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR
Sbjct: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180

Query: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240
           RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD
Sbjct: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240

Query: 241 EK 243
           EK
Sbjct: 241 EK 242

[Close]

BLAST of Csa3G001720 vs. TrEMBL
Match: A0A067LGT5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22382 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.0e-23
Identity = 83/216 (38.43%), Postives = 106/216 (49.07%), Query Frame = 1


Query: 51  NNPPTDVIEPSSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRG 110
           N P  +   PSSS   ++  S  P       S+  +   G++S     G+S   + +KR 
Sbjct: 3   NFPQKNPAVPSSSSSSSSSSSTPPPPPPPPPSILTVGHGGSTSRGGGNGASGEGSSRKRS 62

Query: 111 RG-------DGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPER 170
            G        GGE Q +    +KKGEL + PK +P C+ C+K F SWK +FGHLR+HPER
Sbjct: 63  YGVSVSSSISGGEGQVK----RKKGELIDPPKSDPICSLCDKRFGSWKGVFGHLRAHPER 122

Query: 171 TYRGALPPPTAAE-----LDIRRCQQQ------LASTLLTVAQQVSASRRGLDIDLNQ-- 230
            +RGA PPP  AE     + I    QQ      LA TLL +A Q  A  R  DIDLN+  
Sbjct: 123 DWRGAFPPPKRAEASWSPIRIGNAGQQVFQGHLLAPTLLNLAHQTLAKMRH-DIDLNREP 182

Query: 231 -----PSTADDGDSPDNTRDAGFDLNLEPPPESDDE 242
                PS           R   FDLNL PPPE+ DE
Sbjct: 183 QDAAGPSAPPPPPPQGGNRRCSFDLNLPPPPENGDE 213

[Close]

BLAST of Csa3G001720 vs. TrEMBL
Match: A0A0A0KGW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509590 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21
Identity = 74/175 (42.29%), Postives = 92/175 (52.57%), Query Frame = 1


Query: 88  DVGTSSHEHVGGSSDVEA--------GKKRGRGD---GGEQQQQVKAAKKKGELTEVPKG 147
           DV  SS   V  S D+          G+KRGRG+   GG      +  KKKGEL + P  
Sbjct: 35  DVAVSSSAPVRSSIDITLTLSPQESYGRKRGRGEDHGGGSSSGSGQKGKKKGELIDPPST 94

Query: 148 EPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAE--LDIRRCQQQLASTLLTVA 207
           +P+CATC K+F SWKA+FGHLRSHPER YRGA PPP   E  L     ++Q      +  
Sbjct: 95  DPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSG 154

Query: 208 QQVSA--------SRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDDE 242
             V          S RG+ IDLN P  A +G    N  +  FDLN EP PE+++E
Sbjct: 155 GNVEGRARLSSLPSGRGIGIDLNDPE-AQEG----NKDEFPFDLN-EPAPENEEE 203

[Close]

BLAST of Csa3G001720 vs. TrEMBL
Match: B9S6T8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0873820 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 5.3e-20
Identity = 94/273 (34.43%), Postives = 132/273 (48.35%), Query Frame = 1


Query: 3   KNTNTNANT-NININIDAVSETSPDQRHRRERSPMAASPPP-PARIID----DINNPPTD 62
           +N+ T +N+   N N DAV              P+A  P P PAR +       + PP  
Sbjct: 7   ENSPTKSNSPKGNANEDAVPVPPVSATFPVPAVPVATFPAPGPARALQFGEGSSSAPPLQ 66

Query: 63  -VIEPSSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKR------ 122
            ++E  SS   ++  S +PG+   R+ V  +  +G+S   H GG S   + KK+      
Sbjct: 67  QLVEGISS--PSSSSSSSPGNTPPRRIVEIV--LGSS---HGGGKSGEGSPKKKKALPSS 126

Query: 123 GRGDGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGAL 182
           G+ DG E    V+  +KK E+ + PK +P C+ C K F SWK +FGHLR+HPER +RGA 
Sbjct: 127 GKKDG-ESNPGVEKKRKKAEM-DAPKSDPICSLCGKRFGSWKGVFGHLRAHPERDWRGAF 186

Query: 183 PPP-----------TAAELDIRRCQ-QQLASTLLTVAQQV-----SASRRGLDIDLNQPS 242
           PPP           T    D +  Q + LA TLL +A++        S R  +IDLN+  
Sbjct: 187 PPPKGEAASWSPIKTGGPDDNQAMQVELLAPTLLGLARETLSKMRQESTRVGNIDLNKEP 246

[Close]

BLAST of Csa3G001720 vs. TrEMBL
Match: B9H661_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0005s10330g PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18
Identity = 83/261 (31.80%), Postives = 114/261 (43.68%), Query Frame = 1


Query: 1   MEKNTNTNANTNININIDAVSETSP----DQRHRRERSPMAASPPPPARIIDDINNPPTD 60
           M  N N N N +     D  +E S      +R+  ++    A P P  +        P+ 
Sbjct: 1   MTNNNNNNNNKDAAAIPDKANEHSEAANSPRRNLNDQEEAIAPPRPTVQRSTVETGGPSS 60

Query: 61  V---IEPSSSIVVAAPESVT-------PGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAG 120
           V     P+ + V A+P +VT          VR   S  A  D  T +   V G    E  
Sbjct: 61  VSGPARPAGTEVGASPAAVTLTGGASPSTPVRIGGSGTAAVDPSTVAATVVAG----EGS 120

Query: 121 KKRGRGDGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYR 180
             R R   GE+     + K KGE+   P  EP C+TC + F SWKA+FGH+R+HP+R +R
Sbjct: 121 SLRKRSGKGEESSPHVSKKAKGEMDINPDAEPTCSTCGRTFASWKAVFGHMRAHPDRGWR 180

Query: 181 GALPP-------PTAAELDIRRCQQQLASTLLTVAQQVSASRRGLDID-LNQPSTADDGD 240
           GA PP       P   + D    + QLA  LL++A           ID LNQ       +
Sbjct: 181 GAFPPPEWSPEKPNDQQGDQSALRSQLAPRLLSLA-----------IDTLNQMKHDQGHE 240

[Close]

BLAST of Csa3G001720 vs. TAIR10
Match: AT4G35610.1 (AT4G35610.1 zinc finger (C2H2 type) family protein)

HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16
Identity = 55/150 (36.67%), Postives = 74/150 (49.33%), Query Frame = 1


Query: 106 GKKRGR----------GDGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFG 165
           GKK+ R          GDG  + +  K  KK  ELT  PKG P C  C + F SWKA+FG
Sbjct: 96  GKKKSRPRISTQTDDEGDGLGEGEAKKPKKKAKELTHPPKGPPVCHICGRGFGSWKAVFG 155

Query: 166 HLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQQVSASRRGLDI---DLNQPS 225
           H+R+H +R Y+G LPPPT +    R     L S   T+A     S  G+ +        S
Sbjct: 156 HMRAHRDRNYQGFLPPPTFSAGAERFVIPGLRSA-FTIATVGGGSSGGVAVGGRSSGDFS 215

Query: 226 TADDGDSP--DNTRDAGFDLNLEPPPESDD 241
            +  GD+P  +  R +G DLN+EP  + ++
Sbjct: 216 GSGGGDAPGSEGGRGSGIDLNVEPVEQVEE 244

[Close]

BLAST of Csa3G001720 vs. TAIR10
Match: AT4G35700.1 (AT4G35700.1 zinc finger (C2H2 type) family protein)

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-15
Identity = 57/151 (37.75%), Postives = 69/151 (45.70%), Query Frame = 1


Query: 121 VKAAKKKG--ELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPT--AAE 180
           VK  +KKG  +LT +P+G P C  C K F SWKA+FGHLR H +R Y G LPPPT  AAE
Sbjct: 123 VKKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPPPTFNAAE 182

Query: 181 LDI----RRCQQQLASTLLTVAQQVSASRRG------------------LDIDLNQPSTA 240
                          +T ++V +  +AS  G                    IDLN    A
Sbjct: 183 EGFGGVATASTGGAVATAISVGEVPTASSAGGLATASSDGEGLVSSIGRARIDLN----A 242

Query: 241 DDGDSPDNTRDAG----FDLNLEPPPESDDE 242
           D  +  D     G    FDLN  PPP+ D+E
Sbjct: 243 DPVEEEDKVIGVGSKRKFDLNRSPPPDGDEE 269

[Close]

BLAST of Csa3G001720 vs. TAIR10
Match: AT4G35280.1 (AT4G35280.1 C2H2-like zinc finger protein)

HSP 1 Score: 58.2 bits (139), Expect = 8.4e-09
Identity = 32/80 (40.00%), Postives = 36/80 (45.00%), Query Frame = 1


Query: 97  VGGSSDVEAGKKRGRGDGGEQQQQVKAAKK----KGELTEVPKGEPRCATCNKVFKSWKA 156
           +  S D    KKR +          K+A K    K      PK    C  C + F SWKA
Sbjct: 32  LSSSYDHSPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRKFWSWKA 91

Query: 157 LFGHLRSHPERTYRGALPPP 173
           LFGH+R HPER +RG  PPP
Sbjct: 92  LFGHMRCHPERQWRGINPPP 111

[Close]

BLAST of Csa3G001720 vs. TAIR10
Match: AT2G26940.1 (AT2G26940.1 C2H2-type zinc finger family protein)

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-07
Identity = 23/64 (35.94%), Postives = 41/64 (64.06%), Query Frame = 1


Query: 116 EQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAA 175
           E+++++  A+     T+V +G+ RC  C K F++  +LFGH+R HP+RT++G  PPP + 
Sbjct: 103 EKEKEIDLAR-----TDV-EGKIRCCLCGKEFQTMHSLFGHMRRHPDRTWKGIRPPPPSE 160

Query: 176 ELDI 180
           + ++
Sbjct: 163 KFNL 160

[Close]

BLAST of Csa3G001720 vs. TAIR10
Match: AT5G56200.1 (AT5G56200.1 C2H2 type zinc finger transcription factor family)

HSP 1 Score: 53.1 bits (126), Expect = 2.7e-07
Identity = 43/143 (30.07%), Postives = 61/143 (42.66%), Query Frame = 1


Query: 104 EAGKK--RGRGDGGEQQQQVKAAKK---------KGELTEVPKG--EPRCATCNKVFKSW 163
           E GK+   G+  GG ++  V   +K          G +    +G  E  C  C K F S 
Sbjct: 83  ECGKRFVSGKALGGHKRIHVLETRKFSMMRPKMVSGMVGRSERGDLEVACCVCYKKFTSM 142

Query: 164 KALFGHLRSHPERTYRGALPPPTAAELDIRRCQQQLASTLLTVAQQVSASRRGLDIDLNQ 223
           KAL+GH+R HP+R ++G LPPP      +       +S+ L    +  +S    D D + 
Sbjct: 143 KALYGHMRFHPDRGWKGVLPPPPLLPHPLGNS----SSSTLDHDDEFISSDYDDDDDFD- 202

Query: 224 PSTADDGDSPDNTRDAGFDLNLE 234
               DD D  D+     +D NLE
Sbjct: 203 ----DDDDDDDDENSELWDSNLE 216

[Close]

BLAST of Csa3G001720 vs. NCBI nr
Match: gi|778688264|ref|XP_011652703.1| (PREDICTED: uncharacterized protein LOC105435052 [Cucumis sativus])

HSP 1 Score: 491.5 bits (1264), Expect = 8.5e-136
Identity = 242/242 (100.00%), Postives = 242/242 (100.00%), Query Frame = 1


Query: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60
           MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60

Query: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120
           SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ
Sbjct: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120

Query: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180
           VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR
Sbjct: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180

Query: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240
           RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD
Sbjct: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240

Query: 241 EK 243
           EK
Sbjct: 241 EK 242

[Close]

BLAST of Csa3G001720 vs. NCBI nr
Match: gi|659096552|ref|XP_008449156.1| (PREDICTED: uncharacterized protein LOC103491103 [Cucumis melo])

HSP 1 Score: 465.7 bits (1197), Expect = 5.0e-128
Identity = 230/242 (95.04%), Postives = 234/242 (96.69%), Query Frame = 1


Query: 1   MEKNTNTNANTNININIDAVSETSPDQRHRRERSPMAASPPPPARIIDDINNPPTDVIEP 60
           MEKNTNTNANTNININIDAVSETSPDQRH  ERSPMAASP PPAR IDDINNPPT VIEP
Sbjct: 1   MEKNTNTNANTNININIDAVSETSPDQRHGGERSPMAASPLPPARNIDDINNPPTVVIEP 60

Query: 61  SSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRGRGDGGEQQQQ 120
           SSS +VAAPES TPGDVRRRQSV+AMFDVGTSSHEHVGGSSD EAGKKRGRGDGGEQQQQ
Sbjct: 61  SSSTLVAAPESATPGDVRRRQSVDAMFDVGTSSHEHVGGSSDAEAGKKRGRGDGGEQQQQ 120

Query: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180
           VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR
Sbjct: 121 VKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAELDIR 180

Query: 181 RCQQQLASTLLTVAQQVSASRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240
           RCQQQLASTLLTVAQQV+A+RRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD
Sbjct: 181 RCQQQLASTLLTVAQQVAATRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDD 240

Query: 241 EK 243
           EK
Sbjct: 241 EK 242

[Close]

BLAST of Csa3G001720 vs. NCBI nr
Match: gi|643737706|gb|KDP43755.1| (hypothetical protein JCGZ_22382 [Jatropha curcas])

HSP 1 Score: 117.1 bits (292), Expect = 4.3e-23
Identity = 83/216 (38.43%), Postives = 106/216 (49.07%), Query Frame = 1


Query: 51  NNPPTDVIEPSSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKRG 110
           N P  +   PSSS   ++  S  P       S+  +   G++S     G+S   + +KR 
Sbjct: 3   NFPQKNPAVPSSSSSSSSSSSTPPPPPPPPPSILTVGHGGSTSRGGGNGASGEGSSRKRS 62

Query: 111 RG-------DGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPER 170
            G        GGE Q +    +KKGEL + PK +P C+ C+K F SWK +FGHLR+HPER
Sbjct: 63  YGVSVSSSISGGEGQVK----RKKGELIDPPKSDPICSLCDKRFGSWKGVFGHLRAHPER 122

Query: 171 TYRGALPPPTAAE-----LDIRRCQQQ------LASTLLTVAQQVSASRRGLDIDLNQ-- 230
            +RGA PPP  AE     + I    QQ      LA TLL +A Q  A  R  DIDLN+  
Sbjct: 123 DWRGAFPPPKRAEASWSPIRIGNAGQQVFQGHLLAPTLLNLAHQTLAKMRH-DIDLNREP 182

Query: 231 -----PSTADDGDSPDNTRDAGFDLNLEPPPESDDE 242
                PS           R   FDLNL PPPE+ DE
Sbjct: 183 QDAAGPSAPPPPPPQGGNRRCSFDLNLPPPPENGDE 213

[Close]

BLAST of Csa3G001720 vs. NCBI nr
Match: gi|778722509|ref|XP_011658503.1| (PREDICTED: zinc finger protein ZAT4-like [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 1.8e-21
Identity = 74/175 (42.29%), Postives = 92/175 (52.57%), Query Frame = 1


Query: 88  DVGTSSHEHVGGSSDVEA--------GKKRGRGD---GGEQQQQVKAAKKKGELTEVPKG 147
           DV  SS   V  S D+          G+KRGRG+   GG      +  KKKGEL + P  
Sbjct: 35  DVAVSSSAPVRSSIDITLTLSPQESYGRKRGRGEDHGGGSSSGSGQKGKKKGELIDPPST 94

Query: 148 EPRCATCNKVFKSWKALFGHLRSHPERTYRGALPPPTAAE--LDIRRCQQQLASTLLTVA 207
           +P+CATC K+F SWKA+FGHLRSHPER YRGA PPP   E  L     ++Q      +  
Sbjct: 95  DPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSG 154

Query: 208 QQVSA--------SRRGLDIDLNQPSTADDGDSPDNTRDAGFDLNLEPPPESDDE 242
             V          S RG+ IDLN P  A +G    N  +  FDLN EP PE+++E
Sbjct: 155 GNVEGRARLSSLPSGRGIGIDLNDPE-AQEG----NKDEFPFDLN-EPAPENEEE 203

[Close]

BLAST of Csa3G001720 vs. NCBI nr
Match: gi|255561393|ref|XP_002521707.1| (PREDICTED: sal-like protein 3 [Ricinus communis])

HSP 1 Score: 106.3 bits (264), Expect = 7.7e-20
Identity = 94/273 (34.43%), Postives = 132/273 (48.35%), Query Frame = 1


Query: 3   KNTNTNANT-NININIDAVSETSPDQRHRRERSPMAASPPP-PARIID----DINNPPTD 62
           +N+ T +N+   N N DAV              P+A  P P PAR +       + PP  
Sbjct: 7   ENSPTKSNSPKGNANEDAVPVPPVSATFPVPAVPVATFPAPGPARALQFGEGSSSAPPLQ 66

Query: 63  -VIEPSSSIVVAAPESVTPGDVRRRQSVNAMFDVGTSSHEHVGGSSDVEAGKKR------ 122
            ++E  SS   ++  S +PG+   R+ V  +  +G+S   H GG S   + KK+      
Sbjct: 67  QLVEGISS--PSSSSSSSPGNTPPRRIVEIV--LGSS---HGGGKSGEGSPKKKKALPSS 126

Query: 123 GRGDGGEQQQQVKAAKKKGELTEVPKGEPRCATCNKVFKSWKALFGHLRSHPERTYRGAL 182
           G+ DG E    V+  +KK E+ + PK +P C+ C K F SWK +FGHLR+HPER +RGA 
Sbjct: 127 GKKDG-ESNPGVEKKRKKAEM-DAPKSDPICSLCGKRFGSWKGVFGHLRAHPERDWRGAF 186

Query: 183 PPP-----------TAAELDIRRCQ-QQLASTLLTVAQQV-----SASRRGLDIDLNQPS 242
           PPP           T    D +  Q + LA TLL +A++        S R  +IDLN+  
Sbjct: 187 PPPKGEAASWSPIKTGGPDDNQAMQVELLAPTLLGLARETLSKMRQESTRVGNIDLNKEP 246

The following BLAST results are available for this feature:

BLAST of Csa3G001720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZAT3_ARATH	1.5e-07	40.00	Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=1 SV=1	[more]

BLAST of Csa3G001720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0X7_CUCSA	5.9e-136	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G001720 PE=4 SV=1	[more]
A0A067LGT5_JATCU	3.0e-23	38.43	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22382 PE=4 SV=1	[more]
A0A0A0KGW4_CUCSA	1.3e-21	42.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509590 PE=4 SV=1	[more]
B9S6T8_RICCO	5.3e-20	34.43	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0873820 PE=4 SV=1	[more]
B9H661_POPTR	2.2e-18	31.80	Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0005s10330g PE=4 SV=1	[more]

BLAST of Csa3G001720 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35610.1	1.9e-16	36.67	zinc finger (C2H2 type) family protein	[more]
AT4G35700.1	2.7e-15	37.75	zinc finger (C2H2 type) family protein	[more]
AT4G35280.1	8.4e-09	40.00	C2H2-like zinc finger protein	[more]
AT2G26940.1	2.7e-07	35.94	C2H2-type zinc finger family protein	[more]
AT5G56200.1	2.7e-07	30.07	C2H2 type zinc finger transcription factor family	[more]

BLAST of Csa3G001720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778688264\|ref\|XP_011652703.1\|	8.5e-136	100.00	PREDICTED: uncharacterized protein LOC105435052 [Cucumis sativus]	[more]
gi\|659096552\|ref\|XP_008449156.1\|	5.0e-128	95.04	PREDICTED: uncharacterized protein LOC103491103 [Cucumis melo]	[more]
gi\|643737706\|gb\|KDP43755.1\|	4.3e-23	38.43	hypothetical protein JCGZ_22382 [Jatropha curcas]	[more]
gi\|778722509\|ref\|XP_011658503.1\|	1.8e-21	42.29	PREDICTED: zinc finger protein ZAT4-like [Cucumis sativus]	[more]
gi\|255561393\|ref\|XP_002521707.1\|	7.7e-20	34.43	PREDICTED: sal-like protein 3 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa3G001720.1	Csa3G001720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PFAM	PF13912	zf-C2H2_6	coord: 139..162 score: 8.
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 140..160 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 138..160 score: 8
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 1..173 score: 4.2
None	No IPR available	PANTHER	PTHR26374:SF186	SUBFAMILY NOT NAMED	coord: 1..173 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa3G001720	Cla014348	Watermelon (97103) v1	cuwmB261
Csa3G001720	Cla008950	Watermelon (97103) v1	cuwmB200
Csa3G001720	MELO3C007971	Melon (DHL92) v3.5.1	cumeB262
Csa3G001720	MELO3C013717	Melon (DHL92) v3.5.1	cumeB243
Csa3G001720	ClCG10G000200	Watermelon (Charleston Gray)	cuwcgB189
Csa3G001720	ClCG01G020850	Watermelon (Charleston Gray)	cuwcgB209
Csa3G001720	Lsi07G010480	Bottle gourd (USVL1VR-Ls)	culsiB228
Csa3G001720	MELO3C013717.2	Melon (DHL92) v3.6.1	cumedB224
Csa3G001720	MELO3C007971.2	Melon (DHL92) v3.6.1	cumedB252
Csa3G001720	Cla97C10G184740	Watermelon (97103) v2	cuwmbB181
Csa3G001720	Cla97C01G020390	Watermelon (97103) v2	cuwmbB178
Csa3G001720	Bhi03G000570	Wax gourd	cuwgoB326
Csa3G001720	CSPI06G32420	Wild cucumber (PI 183967)	cpicuB292
Csa3G001720	CSPI03G00230	Wild cucumber (PI 183967)	cpicuB120
Csa3G001720	Cucsa.323160	Cucumber (Gy14) v1	cgycuB458
Csa3G001720	CmaCh06G001600	Cucurbita maxima (Rimu)	cmacuB827
Csa3G001720	CmaCh16G012810	Cucurbita maxima (Rimu)	cmacuB326
Csa3G001720	CmaCh03G006260	Cucurbita maxima (Rimu)	cmacuB658
Csa3G001720	CmoCh06G001510	Cucurbita moschata (Rifu)	cmocuB817
Csa3G001720	CmoCh03G006540	Cucurbita moschata (Rifu)	cmocuB646
Csa3G001720	CmoCh16G013340	Cucurbita moschata (Rifu)	cmocuB316
Csa3G001720	Cp4.1LG08g12740	Cucurbita pepo (Zucchini)	cpecuB851
Csa3G001720	Cp4.1LG14g10640	Cucurbita pepo (Zucchini)	cpecuB212
Csa3G001720	Cp4.1LG10g10500	Cucurbita pepo (Zucchini)	cpecuB069
Csa3G001720	CsGy3G000190	Cucumber (Gy14) v2	cgybcuB109
Csa3G001720	Carg01175	Silver-seed gourd	carcuB0173
Csa3G001720	Carg19433	Silver-seed gourd	carcuB0462

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Csa3G001720	Csa6G509590	Cucumber (Chinese Long) v2	cucuB119

The following block(s) are covering this gene:


Gene	Organism	Block
Csa3G001720	Cucurbita pepo (Zucchini)	cpecuB555