Csa6G509590 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGGACGACCATGAGAAAAGCTCACCGTCCGGTTCCAGCAATGGAGGTGATGGTGGTGATACTCCTTCTAAGGCCATCGCCGATACTCATGAGGACGACGTCGCAGTTTCGTCTTCGGCTCCTGTAAGGAGTAGTATTGATATTACGTTGACTTTATCTCCACAGGAGTCTTATGGGAGGAAGAGAGGTCGAGGGGAAGATCATGGAGGAGGGTCGAGTAGTGGGAGTGGGCAGAAAGGGAAGAAGAAGGGGGAATTGATCGACCCACCCTCCACCGATCCCAAATGTGCCACGTGTGGCAAGATTTTTGGGTCGTGGAAGGCGGTGTTTGGGCACTTGCGATCCCACCCGGAACGGGACTATCGTGGGGCATTCCCGCCACCAAAAATTTGGGAGGAGATGCTGCAACAAGAGACGTTAAGGCGGCAACATGGTCAAGGCGAAGGTAGTAGCGGTGGGAATGTCGAAGGCAGGGCGAGGTTGTCGTCTCTACCGTCGGGTAGGGGTATTGGAATTGATCTGAACGACCCGGAAGCGCAAGAGGGTAACAAGGATGAGTTTCCTTTTGATCTCAATGAGCCTGCACCAGAGAATGAGGAGGAGGATGACAAATAA ATGGAGAAGGACGACCATGAGAAAAGCTCACCGTCCGGTTCCAGCAATGGAGGTGATGGTGGTGATACTCCTTCTAAGGCCATCGCCGATACTCATGAGGACGACGTCGCAGTTTCGTCTTCGGCTCCTGTAAGGAGTAGTATTGATATTACGTTGACTTTATCTCCACAGGAGTCTTATGGGAGGAAGAGAGGTCGAGGGGAAGATCATGGAGGAGGGTCGAGTAGTGGGAGTGGGCAGAAAGGGAAGAAGAAGGGGGAATTGATCGACCCACCCTCCACCGATCCCAAATGTGCCACGTGTGGCAAGATTTTTGGGTCGTGGAAGGCGGTGTTTGGGCACTTGCGATCCCACCCGGAACGGGACTATCGTGGGGCATTCCCGCCACCAAAAATTTGGGAGGAGATGCTGCAACAAGAGACGTTAAGGCGGCAACATGGTCAAGGCGAAGGTAGTAGCGGTGGGAATGTCGAAGGCAGGGCGAGGTTGTCGTCTCTACCGTCGGGTAGGGGTATTGGAATTGATCTGAACGACCCGGAAGCGCAAGAGGGTAACAAGGATGAGTTTCCTTTTGATCTCAATGAGCCTGCACCAGAGAATGAGGAGGAGGATGACAAATAA ATGGAGAAGGACGACCATGAGAAAAGCTCACCGTCCGGTTCCAGCAATGGAGGTGATGGTGGTGATACTCCTTCTAAGGCCATCGCCGATACTCATGAGGACGACGTCGCAGTTTCGTCTTCGGCTCCTGTAAGGAGTAGTATTGATATTACGTTGACTTTATCTCCACAGGAGTCTTATGGGAGGAAGAGAGGTCGAGGGGAAGATCATGGAGGAGGGTCGAGTAGTGGGAGTGGGCAGAAAGGGAAGAAGAAGGGGGAATTGATCGACCCACCCTCCACCGATCCCAAATGTGCCACGTGTGGCAAGATTTTTGGGTCGTGGAAGGCGGTGTTTGGGCACTTGCGATCCCACCCGGAACGGGACTATCGTGGGGCATTCCCGCCACCAAAAATTTGGGAGGAGATGCTGCAACAAGAGACGTTAAGGCGGCAACATGGTCAAGGCGAAGGTAGTAGCGGTGGGAATGTCGAAGGCAGGGCGAGGTTGTCGTCTCTACCGTCGGGTAGGGGTATTGGAATTGATCTGAACGACCCGGAAGCGCAAGAGGGTAACAAGGATGAGTTTCCTTTTGATCTCAATGAGCCTGCACCAGAGAATGAGGAGGAGGATGACAAATAA MEKDDHEKSSPSGSSNGGDGGDTPSKAIADTHEDDVAVSSSAPVRSSIDITLTLSPQESYGRKRGRGEDHGGGSSSGSGQKGKKKGELIDPPSTDPKCATCGKIFGSWKAVFGHLRSHPERDYRGAFPPPKIWEEMLQQETLRRQHGQGEGSSGGNVEGRARLSSLPSGRGIGIDLNDPEAQEGNKDEFPFDLNEPAPENEEEDDK*
BLAST of Csa6G509590 vs. Swiss-Prot
Match: ZAT3_ARATH (Zinc finger protein ZAT3 OS=Arabidopsis thaliana GN=ZAT3 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.0e-09 Identity = 37/94 (39.36%), Postives = 48/94 (51.06%), Query Frame = 1
BLAST of Csa6G509590 vs. Swiss-Prot
Match: ZAT2_ARATH (Zinc finger protein ZAT2 OS=Arabidopsis thaliana GN=ZAT2 PE=1 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 2.8e-07 Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1
BLAST of Csa6G509590 vs. TrEMBL
Match: A0A0A0KGW4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509590 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 1.8e-117 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1
BLAST of Csa6G509590 vs. TrEMBL
Match: A0A0A0L0X7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G001720 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21 Identity = 74/175 (42.29%), Postives = 92/175 (52.57%), Query Frame = 1
BLAST of Csa6G509590 vs. TrEMBL
Match: A0A067LGT5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22382 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 3.5e-20 Identity = 66/166 (39.76%), Postives = 81/166 (48.80%), Query Frame = 1
BLAST of Csa6G509590 vs. TrEMBL
Match: D7MCE8_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_912814 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.2e-17 Identity = 64/167 (38.32%), Postives = 83/167 (49.70%), Query Frame = 1
BLAST of Csa6G509590 vs. TrEMBL
Match: O81793_ARATH (Putative uncharacterized protein AT4g35610 OS=Arabidopsis thaliana GN=F8D20.120 PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.1e-17 Identity = 69/182 (37.91%), Postives = 85/182 (46.70%), Query Frame = 1
BLAST of Csa6G509590 vs. TAIR10
Match: AT4G35610.1 (AT4G35610.1 zinc finger (C2H2 type) family protein) HSP 1 Score: 97.4 bits (241), Expect = 1.1e-20 Identity = 69/182 (37.91%), Postives = 83/182 (45.60%), Query Frame = 1
BLAST of Csa6G509590 vs. TAIR10
Match: AT4G35700.1 (AT4G35700.1 zinc finger (C2H2 type) family protein) HSP 1 Score: 71.2 bits (173), Expect = 8.2e-13 Identity = 52/156 (33.33%), Postives = 64/156 (41.03%), Query Frame = 1
BLAST of Csa6G509590 vs. TAIR10
Match: AT4G35280.1 (AT4G35280.1 C2H2-like zinc finger protein) HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10 Identity = 37/94 (39.36%), Postives = 48/94 (51.06%), Query Frame = 1
BLAST of Csa6G509590 vs. TAIR10
Match: AT2G17180.1 (AT2G17180.1 C2H2-like zinc finger protein) HSP 1 Score: 57.0 bits (136), Expect = 1.6e-08 Identity = 37/91 (40.66%), Postives = 47/91 (51.65%), Query Frame = 1
BLAST of Csa6G509590 vs. TAIR10
Match: AT2G26940.1 (AT2G26940.1 C2H2-type zinc finger family protein) HSP 1 Score: 47.8 bits (112), Expect = 9.7e-06 Identity = 22/52 (42.31%), Postives = 30/52 (57.69%), Query Frame = 1
BLAST of Csa6G509590 vs. NCBI nr
Match: gi|778722509|ref|XP_011658503.1| (PREDICTED: zinc finger protein ZAT4-like [Cucumis sativus]) HSP 1 Score: 429.9 bits (1104), Expect = 2.6e-117 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 1
BLAST of Csa6G509590 vs. NCBI nr
Match: gi|659081072|ref|XP_008441135.1| (PREDICTED: zinc finger protein ZAT4 [Cucumis melo]) HSP 1 Score: 384.0 bits (985), Expect = 1.6e-103 Identity = 193/208 (92.79%), Postives = 196/208 (94.23%), Query Frame = 1
BLAST of Csa6G509590 vs. NCBI nr
Match: gi|778688264|ref|XP_011652703.1| (PREDICTED: uncharacterized protein LOC105435052 [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 1.6e-21 Identity = 74/175 (42.29%), Postives = 92/175 (52.57%), Query Frame = 1
BLAST of Csa6G509590 vs. NCBI nr
Match: gi|659096552|ref|XP_008449156.1| (PREDICTED: uncharacterized protein LOC103491103 [Cucumis melo]) HSP 1 Score: 109.0 bits (271), Expect = 1.0e-20 Identity = 74/175 (42.29%), Postives = 93/175 (53.14%), Query Frame = 1
BLAST of Csa6G509590 vs. NCBI nr
Match: gi|643737706|gb|KDP43755.1| (hypothetical protein JCGZ_22382 [Jatropha curcas]) HSP 1 Score: 106.7 bits (265), Expect = 5.0e-20 Identity = 66/166 (39.76%), Postives = 81/166 (48.80%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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