Csa2G258630 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGGATCTCAAAAATTCAGCCACCCGCCAAGCTTTCTCATTCTCTCAATTGCAACTGTAGGACTTCAAGTTTCTTCAGTTCTTAATTTATTGATTTCTTGTTCTCAATTTCAAAACCATGGGTTTTCGTGTCGCAAAAATTGTAAATGCTGTGCATAATATAGGTCTTTCTTCTCTTGCAACAAACCAAGAACCATCAATTGTTCGCAAAGGTTATTGTGCCGTTTATGTTGGAGAGAGCCAAAGGAAGCGGTTTGTGATTCCAATATCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCTGTCAAGCTGAAGAAGAATTTGGTTACAATCACCCCACGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGGTCTCATCTCTCATTTGCATTAGTTGCGAAGCAAATACTATTTTTGTTAGCCCACAATCTTGTAGATCAGATTGTATCACTTTTATGTACATTTTTTTGAGGGAGAGCTAAATTGCCTCCCCAAATGATGTATACTAGATTAGATACACAAATGTTTTTCGTTCTTTTGAACTCCTCTGCATATATATATATTTTTCTGAAAGGAAATATATATTTTTTATAGATGGAATGAGAAGAGATAAAGCTCAAAAGGTACCTGAGGTTGAAAAGCATAAAGCTGGTATAACCAAATTACAAAGGCAGAATGAAAACCTTTTAATTAAGGCCTAGAACTTGGAACGAATAACCTGGATAATATATAGAAAGTGAGCAAAAATCTTTTGTACTCCCTACATAGGTCCCTTTGTATCTTTTTTTCTTTTGCTATTGATTCTTTTAATTGTCTTTGTCAGAAAAACTTCAGTTTCATAATTCTTCAAATCACCAACATCAAGTAGTCAAATAACTATCTATAAGACTGGTATCTTTATATTTGTTT ATGGGTTTTCGTGTCGCAAAAATTGTAAATGCTGTGCATAATATAGGTCTTTCTTCTCTTGCAACAAACCAAGAACCATCAATTGTTCGCAAAGGTTATTGTGCCGTTTATGTTGGAGAGAGCCAAAGGAAGCGGTTTGTGATTCCAATATCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCTGTCAAGCTGAAGAAGAATTTGGTTACAATCACCCCACGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGGTCTCATCTCTCATTTGCATTAG ATGGGTTTTCGTGTCGCAAAAATTGTAAATGCTGTGCATAATATAGGTCTTTCTTCTCTTGCAACAAACCAAGAACCATCAATTGTTCGCAAAGGTTATTGTGCCGTTTATGTTGGAGAGAGCCAAAGGAAGCGGTTTGTGATTCCAATATCTTACTTGAATCGGCCATTTTTCAAAGATTTGCTCTGTCAAGCTGAAGAAGAATTTGGTTACAATCACCCCACGGGAGGTCTCACCATTCCCTGCAGTGATGATACATTCATCGGTCTCATCTCTCATTTGCATTAG MGFRVAKIVNAVHNIGLSSLATNQEPSIVRKGYCAVYVGESQRKRFVIPISYLNRPFFKDLLCQAEEEFGYNHPTGGLTIPCSDDTFIGLISHLH*
BLAST of Csa2G258630 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 6.1e-21 Identity = 57/98 (58.16%), Postives = 65/98 (66.33%), Query Frame = 1
BLAST of Csa2G258630 vs. Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 2.3e-20 Identity = 53/98 (54.08%), Postives = 64/98 (65.31%), Query Frame = 1
BLAST of Csa2G258630 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.0e-20 Identity = 42/65 (64.62%), Postives = 54/65 (83.08%), Query Frame = 1
BLAST of Csa2G258630 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 5.2e-20 Identity = 53/98 (54.08%), Postives = 65/98 (66.33%), Query Frame = 1
BLAST of Csa2G258630 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-19 Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 1
BLAST of Csa2G258630 vs. TrEMBL
Match: A0A0A0LM55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258630 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 3.1e-48 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1
BLAST of Csa2G258630 vs. TrEMBL
Match: A0A0A0LIY4_CUCSA (SAUR family protein OS=Cucumis sativus GN=Csa_2G258610 PE=4 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 9.1e-32 Identity = 67/95 (70.53%), Postives = 79/95 (83.16%), Query Frame = 1
BLAST of Csa2G258630 vs. TrEMBL
Match: M5W086_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013844mg PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 4.1e-24 Identity = 59/98 (60.20%), Postives = 72/98 (73.47%), Query Frame = 1
BLAST of Csa2G258630 vs. TrEMBL
Match: M5W1D5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026172mg PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 5.4e-24 Identity = 62/94 (65.96%), Postives = 72/94 (76.60%), Query Frame = 1
BLAST of Csa2G258630 vs. TrEMBL
Match: M5VNP1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022319mg PE=4 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 7.0e-24 Identity = 58/98 (59.18%), Postives = 73/98 (74.49%), Query Frame = 1
BLAST of Csa2G258630 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 99.0 bits (245), Expect = 1.7e-21 Identity = 42/65 (64.62%), Postives = 54/65 (83.08%), Query Frame = 1
BLAST of Csa2G258630 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 98.6 bits (244), Expect = 2.2e-21 Identity = 48/94 (51.06%), Postives = 65/94 (69.15%), Query Frame = 1
BLAST of Csa2G258630 vs. TAIR10
Match: AT5G18030.1 (AT5G18030.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.1 bits (240), Expect = 6.5e-21 Identity = 42/80 (52.50%), Postives = 58/80 (72.50%), Query Frame = 1
BLAST of Csa2G258630 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 97.1 bits (240), Expect = 6.5e-21 Identity = 48/99 (48.48%), Postives = 65/99 (65.66%), Query Frame = 1
BLAST of Csa2G258630 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 96.7 bits (239), Expect = 8.5e-21 Identity = 42/68 (61.76%), Postives = 54/68 (79.41%), Query Frame = 1
BLAST of Csa2G258630 vs. NCBI nr
Match: gi|700206748|gb|KGN61867.1| (hypothetical protein Csa_2G258630 [Cucumis sativus]) HSP 1 Score: 198.7 bits (504), Expect = 4.5e-48 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 1
BLAST of Csa2G258630 vs. NCBI nr
Match: gi|659116174|ref|XP_008457944.1| (PREDICTED: auxin-induced protein 6B-like [Cucumis melo]) HSP 1 Score: 155.6 bits (392), Expect = 4.3e-35 Identity = 73/81 (90.12%), Postives = 77/81 (95.06%), Query Frame = 1
BLAST of Csa2G258630 vs. NCBI nr
Match: gi|659116172|ref|XP_008457943.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 149.1 bits (375), Expect = 4.1e-33 Identity = 71/95 (74.74%), Postives = 80/95 (84.21%), Query Frame = 1
BLAST of Csa2G258630 vs. NCBI nr
Match: gi|700206746|gb|KGN61865.1| (SAUR family protein [Cucumis sativus]) HSP 1 Score: 144.1 bits (362), Expect = 1.3e-31 Identity = 67/95 (70.53%), Postives = 79/95 (83.16%), Query Frame = 1
BLAST of Csa2G258630 vs. NCBI nr
Match: gi|645263017|ref|XP_008237034.1| (PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Prunus mume]) HSP 1 Score: 120.9 bits (302), Expect = 1.2e-24 Identity = 60/98 (61.22%), Postives = 73/98 (74.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|