CSPI07G00580 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTCCGTTTGCCTCGAATTGTTACTTCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGAAATGGAGAATCTCCAAAAGCTGTCGATGTTCCTAAGGGTTATTTTACCGTTTATGTCGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAACCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATACAATCATCCAATGGGTGGCATCACAATTCCTTGTCGTGAAGAAATTTTCCAAAATCTCACTCAGAGTTTGTATGACTTGTAAAGTAGAGAGATTACCATCTAGAAATAGATAGGATAGAAAAGGACTAGATTAGTGCAAAATTTATACATAGTGTAAACACTTTCAATGAGAGAACTCGATTCATTCAAACTATTCTATGTTGTTCTTTATTCTTTTCATTACTAAAGCTAGATGATGATACAACTTGTTGGAAAATTCTTTTTTCATTCCTCTTACCCCTCACATTTGTTCTCTGTTCAGTTTAAAAGTGGAAAAGAGGTCAACAAAGGCATCCAAGCTTTTCCTATTCATATTAAATGATTTCTGAAGTATCTCCGATGGCAAACATTTTGGGGACAATATTTTACTGACCAAAAATTTTCAGCCAGATGGTTCAATTTAACAAATTTACCATATGCTTAGATTTGTGGGGCAAGCTAATTTCTAAATTGAAACTGATCTTTCAATGAATTTATACTAATTTAAGCTCTTCCAGAATTTTAACTCAAGCTGTTATTATTTAAGAGATCATTTGCACTAAATATCCAGGTACTGTAATGTCTTATCAAGAAGCTGTACTGATTTCAGATTAAGCACCTGACTCAAATGAGGTTAGCACTCATAAATTTACAATAGCATTAGTGGGATCCATGTAGGTTTCTTTAACAATTAATGGCAGCTGAAATTGTTCACCTACCAGCATACACTACTAATGAAAACCATCCTATTGATGATAAGTCAGAAAACAGAAGCATGTGCTATACATAAATAATAAAAATAGAATGCTACATTTTTCCCTAGCTGTATTTGAAGTGGGGCCCCTTTTAGGATGTTAATTTTGGAATGCCTGTACTGTAGATAATATGTTTGCCAACAAAAATACATTCACAACCACTGTTCAACGTTCATCAATTTGACTACAAATTCATGTAGTAACCTCTTGTCATATGTTTCCCCGTTCACCTGCAGTGGAATCCACATTTGTAGATTTTGTAGAATCATATTATATGATTCTATATTTCTATGGAATCTTTCGGTGTAAAGTTTAAATTTTCTTGCACAGAATTGAAGATCAAGAGATGCAAATATTGCTATCAGACTACCCTGTCATCATGTCGAAGATATCTTTTGCCAAAGCTTCAAATGTTGTTGAATCTTCTTTCCTGTCCAATCATGTTCCAAATGGGTAA ATGGGTTTCCGTTTGCCTCGAATTGTTACTTCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGAAATGGAGAATCTCCAAAAGCTGTCGATGTTCCTAAGGGTTATTTTACCGTTTATGTCGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAACCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATACAATCATCCAATGGGTGGCATCACAATTCCTTGTCGTGAAGAAATTTTCCAAAATCTCACTCAGAGTTTGTATGACTTAATTGAAGATCAAGAGATGCAAATATTGCTATCAGACTACCCTGTCATCATGTCGAAGATATCTTTTGCCAAAGCTTCAAATGTTGTTGAATCTTCTTTCCTGTCCAATCATGTTCCAAATGGGTAA ATGGGTTTCCGTTTGCCTCGAATTGTTACTTCTAAGCAAAGTCTTCAGCGATCTTCATCAACAGGAAATGGAGAATCTCCAAAAGCTGTCGATGTTCCTAAGGGTTATTTTACCGTTTATGTCGGTGAGGAACAAAAGAAGCGTTTTGTCATCCCACTATCTTACTTGAACCAACCTTCTTTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATACAATCATCCAATGGGTGGCATCACAATTCCTTGTCGTGAAGAAATTTTCCAAAATCTCACTCAGAGTTTGTATGACTTAATTGAAGATCAAGAGATGCAAATATTGCTATCAGACTACCCTGTCATCATGTCGAAGATATCTTTTGCCAAAGCTTCAAATGTTGTTGAATCTTCTTTCCTGTCCAATCATGTTCCAAATGGGTAA
BLAST of CSPI07G00580 vs. Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 4.9e-27 Identity = 61/97 (62.89%), Postives = 75/97 (77.32%), Query Frame = 1
BLAST of CSPI07G00580 vs. Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 6.4e-27 Identity = 60/100 (60.00%), Postives = 76/100 (76.00%), Query Frame = 1
BLAST of CSPI07G00580 vs. Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.4e-26 Identity = 60/97 (61.86%), Postives = 72/97 (74.23%), Query Frame = 1
BLAST of CSPI07G00580 vs. Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1) HSP 1 Score: 117.9 bits (294), Expect = 9.3e-26 Identity = 60/97 (61.86%), Postives = 69/97 (71.13%), Query Frame = 1
BLAST of CSPI07G00580 vs. Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25 Identity = 58/94 (61.70%), Postives = 68/94 (72.34%), Query Frame = 1
BLAST of CSPI07G00580 vs. TrEMBL
Match: A0A0A0K160_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008990 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.2e-43 Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of CSPI07G00580 vs. TrEMBL
Match: A0A0A0K4J0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008980 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 2.6e-43 Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 1
BLAST of CSPI07G00580 vs. TrEMBL
Match: A0A0A0K5T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009020 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 4.5e-43 Identity = 88/97 (90.72%), Postives = 91/97 (93.81%), Query Frame = 1
BLAST of CSPI07G00580 vs. TrEMBL
Match: A0A0A0K0H9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009010 PE=4 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 6.0e-40 Identity = 82/99 (82.83%), Postives = 89/99 (89.90%), Query Frame = 1
BLAST of CSPI07G00580 vs. TrEMBL
Match: A0A0A0K0H6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G008960 PE=4 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 8.7e-39 Identity = 84/101 (83.17%), Postives = 88/101 (87.13%), Query Frame = 1
BLAST of CSPI07G00580 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 122.9 bits (307), Expect = 1.6e-28 Identity = 56/94 (59.57%), Postives = 75/94 (79.79%), Query Frame = 1
BLAST of CSPI07G00580 vs. TAIR10
Match: AT4G34800.1 (AT4G34800.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.5 bits (280), Expect = 2.2e-25 Identity = 57/98 (58.16%), Postives = 68/98 (69.39%), Query Frame = 1
BLAST of CSPI07G00580 vs. TAIR10
Match: AT5G18080.1 (AT5G18080.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 107.1 bits (266), Expect = 9.3e-24 Identity = 49/90 (54.44%), Postives = 67/90 (74.44%), Query Frame = 1
BLAST of CSPI07G00580 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 106.3 bits (264), Expect = 1.6e-23 Identity = 49/91 (53.85%), Postives = 68/91 (74.73%), Query Frame = 1
BLAST of CSPI07G00580 vs. TAIR10
Match: AT5G18010.1 (AT5G18010.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 105.5 bits (262), Expect = 2.7e-23 Identity = 49/90 (54.44%), Postives = 67/90 (74.44%), Query Frame = 1
BLAST of CSPI07G00580 vs. NCBI nr
Match: gi|659094350|ref|XP_008448013.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 191.4 bits (485), Expect = 1.1e-45 Identity = 94/100 (94.00%), Postives = 96/100 (96.00%), Query Frame = 1
BLAST of CSPI07G00580 vs. NCBI nr
Match: gi|778722820|ref|XP_011658574.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 184.1 bits (466), Expect = 1.7e-43 Identity = 88/97 (90.72%), Postives = 93/97 (95.88%), Query Frame = 1
BLAST of CSPI07G00580 vs. NCBI nr
Match: gi|659094354|ref|XP_008448015.1| (PREDICTED: LOW QUALITY PROTEIN: auxin-induced protein X10A-like [Cucumis melo]) HSP 1 Score: 183.3 bits (464), Expect = 2.9e-43 Identity = 89/99 (89.90%), Postives = 94/99 (94.95%), Query Frame = 1
BLAST of CSPI07G00580 vs. NCBI nr
Match: gi|778722823|ref|XP_011658575.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 183.0 bits (463), Expect = 3.8e-43 Identity = 88/99 (88.89%), Postives = 92/99 (92.93%), Query Frame = 1
BLAST of CSPI07G00580 vs. NCBI nr
Match: gi|778722830|ref|XP_004144905.2| (PREDICTED: auxin-induced protein X10A-like [Cucumis sativus]) HSP 1 Score: 182.2 bits (461), Expect = 6.4e-43 Identity = 88/97 (90.72%), Postives = 91/97 (93.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |