Csa2G000260 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCAACTTCTGCAATTTCAATGGCTATGCCAATTACTAATGCGGCACAGAAGAGAGCGAGGAGGGCCGAAGCCTTTGCCAAACCATTGCCTTTGAGACCTTCCAACAAGCCAAGTGGCTCCTCAAGCTCCAGCGCCAAGTTCCAAGTGCGGGCTTCTTTGAAGGAGAAGGCTGTCGCTGGACTGGCTGCAACGGCACTCACAGCTTCCATGGTCCTTCCTGAAGTGGCTGAAGCTGCTGGCTCTGGAGTTAGTCCCTCTCTCAAGAATTTCTTGCTCAGCATTGCCGCCGGTGGAGTAGTCGTCACTGCTATCTTGGGTGCAGTTATTGGCGTCGCCAATTTCGATCCCGTCAAGCGGACCTGA ATGGCTTCAACTTCTGCAATTTCAATGGCTATGCCAATTACTAATGCGGCACAGAAGAGAGCGAGGAGGGCCGAAGCCTTTGCCAAACCATTGCCTTTGAGACCTTCCAACAAGCCAAGTGGCTCCTCAAGCTCCAGCGCCAAGTTCCAAGTGCGGGCTTCTTTGAAGGAGAAGGCTGTCGCTGGACTGGCTGCAACGGCACTCACAGCTTCCATGGTCCTTCCTGAAGTGGCTGAAGCTGCTGGCTCTGGAGTTAGTCCCTCTCTCAAGAATTTCTTGCTCAGCATTGCCGCCGGTGGAGTAGTCGTCACTGCTATCTTGGGTGCAGTTATTGGCGTCGCCAATTTCGATCCCGTCAAGCGGACCTGA ATGGCTTCAACTTCTGCAATTTCAATGGCTATGCCAATTACTAATGCGGCACAGAAGAGAGCGAGGAGGGCCGAAGCCTTTGCCAAACCATTGCCTTTGAGACCTTCCAACAAGCCAAGTGGCTCCTCAAGCTCCAGCGCCAAGTTCCAAGTGCGGGCTTCTTTGAAGGAGAAGGCTGTCGCTGGACTGGCTGCAACGGCACTCACAGCTTCCATGGTCCTTCCTGAAGTGGCTGAAGCTGCTGGCTCTGGAGTTAGTCCCTCTCTCAAGAATTTCTTGCTCAGCATTGCCGCCGGTGGAGTAGTCGTCACTGCTATCTTGGGTGCAGTTATTGGCGTCGCCAATTTCGATCCCGTCAAGCGGACCTGA MASTSAISMAMPITNAAQKRARRAEAFAKPLPLRPSNKPSGSSSSSAKFQVRASLKEKAVAGLAATALTASMVLPEVAEAAGSGVSPSLKNFLLSIAAGGVVVTAILGAVIGVANFDPVKRT*
BLAST of Csa2G000260 vs. TrEMBL
Match: A0A0A0LIL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000260 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 1.8e-56 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1
BLAST of Csa2G000260 vs. TrEMBL
Match: B9RK19_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1045940 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 8.1e-41 Identity = 93/122 (76.23%), Postives = 107/122 (87.70%), Query Frame = 1
BLAST of Csa2G000260 vs. TrEMBL
Match: A9PE66_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 9.9e-39 Identity = 89/121 (73.55%), Postives = 102/121 (84.30%), Query Frame = 1
BLAST of Csa2G000260 vs. TrEMBL
Match: A9PJ86_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 9.9e-39 Identity = 89/121 (73.55%), Postives = 102/121 (84.30%), Query Frame = 1
BLAST of Csa2G000260 vs. TrEMBL
Match: U5GB08_POPTR (Membrane family protein OS=Populus trichocarpa GN=POPTR_0006s14630g PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 2.2e-38 Identity = 88/121 (72.73%), Postives = 102/121 (84.30%), Query Frame = 1
BLAST of Csa2G000260 vs. TAIR10
Match: AT2G06520.1 (AT2G06520.1 photosystem II subunit X) HSP 1 Score: 136.3 bits (342), Expect = 1.2e-32 Identity = 69/122 (56.56%), Postives = 89/122 (72.95%), Query Frame = 1
BLAST of Csa2G000260 vs. NCBI nr
Match: gi|778665565|ref|XP_011648590.1| (PREDICTED: uncharacterized protein LOC105434533 [Cucumis sativus]) HSP 1 Score: 226.5 bits (576), Expect = 2.6e-56 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 1
BLAST of Csa2G000260 vs. NCBI nr
Match: gi|659071401|ref|XP_008459641.1| (PREDICTED: uncharacterized protein LOC103498700 [Cucumis melo]) HSP 1 Score: 221.1 bits (562), Expect = 1.1e-54 Identity = 119/122 (97.54%), Postives = 119/122 (97.54%), Query Frame = 1
BLAST of Csa2G000260 vs. NCBI nr
Match: gi|255546007|ref|XP_002514063.1| (PREDICTED: uncharacterized protein LOC8268448 [Ricinus communis]) HSP 1 Score: 174.5 bits (441), Expect = 1.2e-40 Identity = 93/122 (76.23%), Postives = 107/122 (87.70%), Query Frame = 1
BLAST of Csa2G000260 vs. NCBI nr
Match: gi|1009143348|ref|XP_015889216.1| (PREDICTED: mechanosensitive ion channel protein 10-like [Ziziphus jujuba]) HSP 1 Score: 171.8 bits (434), Expect = 7.5e-40 Identity = 89/122 (72.95%), Postives = 103/122 (84.43%), Query Frame = 1
BLAST of Csa2G000260 vs. NCBI nr
Match: gi|118489268|gb|ABK96439.1| (unknown [Populus trichocarpa x Populus deltoides]) HSP 1 Score: 167.5 bits (423), Expect = 1.4e-38 Identity = 89/121 (73.55%), Postives = 102/121 (84.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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