Cucsa.141580 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAAGCTACCTAAACCTCCAAACTTAACATTTTTAGGAATAAGTTTCCAAATTTGCACACCGAACGACGAACCTTTAAGGTGTTCGTTACAACCAATAAACATCAAAATAAATAATCACTGATATATTTTGGAAGGCAACCTATTTAGAGGGTAGCGAAGGACACAGAATAAGGTGGAGAGTATAGAGGCCCAAAGGGAAGGCCCAAAGGAAAGGCCCAAAAGTATAAGAAGACCGTACCGGAGGATTTGAAAGGCGATGATGATTGGACCAATAAGATAACCTTATCTACCAATAAAGCATTCAGAAGTTGCCACGTCAGACCAAGATCAAGATTTCAAGCTCACCAACAATCCCCAATTCCCTCCGCTTCTTCTTCACTGGCCCACGCCCTTTTCCCAAAAATCCCCTAATCCCCCAATTCTCATCTTCCCAACAATTTTCCACAAAATCCTCCATTCCCCCAACCTCCCAATTCATCCCATCAATGGCTTCCACTTCCGCTCTTTCAATGGCCTTACCATTCACCCACGCCACCCGCAAGCCACTCTCCAACGACGCTTTCTTCAACCCATTGCCCTCTTTTAAGTCCCGCAAGCCCATCGCCACTGCTCCCATCTCCAACGGAAGGATCCTCGCCGTTCGATCTTCCTTCAAGGAGAAGGCTGTTGCTGGAATCTCTGCTGCTGCTCTCACCGCGTCGATGGTCATTCCAGAGGTTGCCGAGGCTGCCGGATCCGGTGTCTCGCCCTCGTTGAAGAACTTCTTGCTGAGTATTGCGGCAGGTGGAGTGGTGGTGGTGGCGATATTGGGGGCGGTCATCGGCGTCGCCAACTTTGACCCGGTGAAGCGAAGCTGAGCGCAAATGTGAAGTAAAAAGGGGGGAAAAAAAGAAGTAAATTGTAATTTTTGTGTTTTACGTTTATTTAATCGTTGTGTTTGTGGTCATGCTAAATTGCTAATGTATGGATTTTTTAGCTGTAAACTTTTTCCATTCAACTCTAAATTTCTCCATCTCTCTTCATTTATGCCCAAATGAATCTCTATTCAATCACAACATT CTCAAGCTACCTAAACCTCCAAACTTAACATTTTTAGGAATAAGTTTCCAAATTTGCACACCGAACGACGAACCTTTAAGGTGTTCGTTACAACCAATAAACATCAAAATAAATAATCACTGATATATTTTGGAAGGCAACCTATTTAGAGGGTAGCGAAGGACACAGAATAAGGTGGAGAGTATAGAGGCCCAAAGGGAAGGCCCAAAGGAAAGGCCCAAAAGTATAAGAAGACCGTACCGGAGGATTTGAAAGGCGATGATGATTGGACCAATAAGATAACCTTATCTACCAATAAAGCATTCAGAAGTTGCCACGTCAGACCAAGATCAAGATTTCAAGCTCACCAACAATCCCCAATTCCCTCCGCTTCTTCTTCACTGGCCCACGCCCTTTTCCCAAAAATCCCCTAATCCCCCAATTCTCATCTTCCCAACAATTTTCCACAAAATCCTCCATTCCCCCAACCTCCCAATTCATCCCATCAATGGCTTCCACTTCCGCTCTTTCAATGGCCTTACCATTCACCCACGCCACCCGCAAGCCACTCTCCAACGACGCTTTCTTCAACCCATTGCCCTCTTTTAAGTCCCGCAAGCCCATCGCCACTGCTCCCATCTCCAACGGAAGGATCCTCGCCGTTCGATCTTCCTTCAAGGAGAAGGCTGTTGCTGGAATCTCTGCTGCTGCTCTCACCGCGTCGATGGTCATTCCAGAGGTTGCCGAGGCTGCCGGATCCGGTGTCTCGCCCTCGTTGAAGAACTTCTTGCTGAGTATTGCGGCAGGTGGAGTGGTGGTGGTGGCGATATTGGGGGCGGTCATCGGCGTCGCCAACTTTGACCCGGTGAAGCGAAGCTGAGCGCAAATGTGAAGTAAAAAGGGGGGAAAAAAAGAAGTAAATTGTAATTTTTGTGTTTTACGTTTATTTAATCGTTGTGTTTGTGGTCATGCTAAATTGCTAATGTATGGATTTTTTAGCTGTAAACTTTTTCCATTCAACTCTAAATTTCTCCATCTCTCTTCATTTATGCCCAAATGAATCTCTATTCAATCACAACATT ATGGCTTCCACTTCCGCTCTTTCAATGGCCTTACCATTCACCCACGCCACCCGCAAGCCACTCTCCAACGACGCTTTCTTCAACCCATTGCCCTCTTTTAAGTCCCGCAAGCCCATCGCCACTGCTCCCATCTCCAACGGAAGGATCCTCGCCGTTCGATCTTCCTTCAAGGAGAAGGCTGTTGCTGGAATCTCTGCTGCTGCTCTCACCGCGTCGATGGTCATTCCAGAGGTTGCCGAGGCTGCCGGATCCGGTGTCTCGCCCTCGTTGAAGAACTTCTTGCTGAGTATTGCGGCAGGTGGAGTGGTGGTGGTGGCGATATTGGGGGCGGTCATCGGCGTCGCCAACTTTGACCCGGTGAAGCGAAGCTGA MASTSALSMALPFTHATRKPLSNDAFFNPLPSFKSRKPIATAPISNGRILAVRSSFKEKAVAGISAAALTASMVIPEVAEAAGSGVSPSLKNFLLSIAAGGVVVVAILGAVIGVANFDPVKRS*
BLAST of Cucsa.141580 vs. TrEMBL
Match: A0A0A0LWL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G595840 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 4.3e-58 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of Cucsa.141580 vs. TrEMBL
Match: B9RK19_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1045940 PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 1.9e-34 Identity = 85/124 (68.55%), Postives = 105/124 (84.68%), Query Frame = 1
BLAST of Cucsa.141580 vs. TrEMBL
Match: A0A0A0LIL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G000260 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 5.7e-34 Identity = 86/124 (69.35%), Postives = 99/124 (79.84%), Query Frame = 1
BLAST of Cucsa.141580 vs. TrEMBL
Match: U5FIS7_POPTR (Membrane family protein OS=Populus trichocarpa GN=POPTR_0018s07160g PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 3.7e-33 Identity = 83/124 (66.94%), Postives = 98/124 (79.03%), Query Frame = 1
BLAST of Cucsa.141580 vs. TrEMBL
Match: A9PJ43_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.4e-32 Identity = 83/124 (66.94%), Postives = 98/124 (79.03%), Query Frame = 1
BLAST of Cucsa.141580 vs. TAIR10
Match: AT2G06520.1 (AT2G06520.1 photosystem II subunit X) HSP 1 Score: 125.6 bits (314), Expect = 2.2e-29 Identity = 69/123 (56.10%), Postives = 87/123 (70.73%), Query Frame = 1
BLAST of Cucsa.141580 vs. NCBI nr
Match: gi|700211184|gb|KGN66280.1| (hypothetical protein Csa_1G595840 [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 6.2e-58 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of Cucsa.141580 vs. NCBI nr
Match: gi|778665326|ref|XP_004144122.2| (PREDICTED: mechanosensitive ion channel protein 10-like [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 6.2e-58 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of Cucsa.141580 vs. NCBI nr
Match: gi|659100057|ref|XP_008450907.1| (PREDICTED: uncharacterized protein LOC103492356 [Cucumis melo]) HSP 1 Score: 217.2 bits (552), Expect = 1.6e-53 Identity = 114/123 (92.68%), Postives = 117/123 (95.12%), Query Frame = 1
BLAST of Cucsa.141580 vs. NCBI nr
Match: gi|720018912|ref|XP_010261944.1| (PREDICTED: uncharacterized protein LOC104600599 [Nelumbo nucifera]) HSP 1 Score: 154.1 bits (388), Expect = 1.6e-34 Identity = 88/125 (70.40%), Postives = 100/125 (80.00%), Query Frame = 1
BLAST of Cucsa.141580 vs. NCBI nr
Match: gi|255546007|ref|XP_002514063.1| (PREDICTED: uncharacterized protein LOC8268448 [Ricinus communis]) HSP 1 Score: 153.3 bits (386), Expect = 2.8e-34 Identity = 85/124 (68.55%), Postives = 105/124 (84.68%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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