Carg18638 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCAACTTCCGCAGTTTCAATGGCTATGCCAATTACTAATGCGACCCAGAAGAGAGTGAGGAGCACCGAGGCCTTCGCTAAGGCATTGCCTTTGAGGCCTTCCAACAAGCCAATTGCTGCATCAAAATCCAGCAGCGCCAAGTTCCAAGTGCGGGCTTCTTTGAAGGAGAAGGCAATTGCTGGATTGGCTGCAACTGCACTGACGGCCTCCATGGTGCTTCCTGAGGTGGCTGAAGCTGCAGGAGCTGGAGTTACCCCTTCTCTCAAGAATTTCTTGCTCAGTATTGCCGCCGGTGGAGTAGTTGTCACTGCTATCTTGGGTGCAATTATCGGTGTCTCCAATTTCGACCCCGTAAAGCGGACCTGA ATGGCTTCAACTTCCGCAGTTTCAATGGCTATGCCAATTACTAATGCGACCCAGAAGAGAGTGAGGAGCACCGAGGCCTTCGCTAAGGCATTGCCTTTGAGGCCTTCCAACAAGCCAATTGCTGCATCAAAATCCAGCAGCGCCAAGTTCCAAGTGCGGGCTTCTTTGAAGGAGAAGGCAATTGCTGGATTGGCTGCAACTGCACTGACGGCCTCCATGGTGCTTCCTGAGGTGGCTGAAGCTGCAGGAGCTGGAGTTACCCCTTCTCTCAAGAATTTCTTGCTCAGTATTGCCGCCGGTGGAGTAGTTGTCACTGCTATCTTGGGTGCAATTATCGGTGTCTCCAATTTCGACCCCGTAAAGCGGACCTGA ATGGCTTCAACTTCCGCAGTTTCAATGGCTATGCCAATTACTAATGCGACCCAGAAGAGAGTGAGGAGCACCGAGGCCTTCGCTAAGGCATTGCCTTTGAGGCCTTCCAACAAGCCAATTGCTGCATCAAAATCCAGCAGCGCCAAGTTCCAAGTGCGGGCTTCTTTGAAGGAGAAGGCAATTGCTGGATTGGCTGCAACTGCACTGACGGCCTCCATGGTGCTTCCTGAGGTGGCTGAAGCTGCAGGAGCTGGAGTTACCCCTTCTCTCAAGAATTTCTTGCTCAGTATTGCCGCCGGTGGAGTAGTTGTCACTGCTATCTTGGGTGCAATTATCGGTGTCTCCAATTTCGACCCCGTAAAGCGGACCTGA MASTSAVSMAMPITNATQKRVRSTEAFAKALPLRPSNKPIAASKSSSAKFQVRASLKEKAIAGLAATALTASMVLPEVAEAAGAGVTPSLKNFLLSIAAGGVVVTAILGAIIGVSNFDPVKRT
BLAST of Carg18638 vs. NCBI nr
Match: XP_023537653.1 (uncharacterized protein LOC111798628 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of Carg18638 vs. NCBI nr
Match: XP_022938093.1 (uncharacterized protein LOC111444282 [Cucurbita moschata]) HSP 1 Score: 210.3 bits (534), Expect = 3.7e-51 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of Carg18638 vs. NCBI nr
Match: XP_022965530.1 (uncharacterized protein LOC111465405 [Cucurbita maxima]) HSP 1 Score: 209.9 bits (533), Expect = 4.8e-51 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0
BLAST of Carg18638 vs. NCBI nr
Match: XP_022946746.1 (uncharacterized protein LOC111450721 [Cucurbita moschata]) HSP 1 Score: 192.2 bits (487), Expect = 1.0e-45 Identity = 113/123 (91.87%), Postives = 117/123 (95.12%), Query Frame = 0
BLAST of Carg18638 vs. NCBI nr
Match: XP_022999231.1 (uncharacterized protein LOC111493667 [Cucurbita maxima] >XP_023522826.1 uncharacterized protein LOC111786846 [Cucurbita pepo subsp. pepo] >XP_023546323.1 uncharacterized protein LOC111805446 [Cucurbita pepo subsp. pepo] >XP_023546324.1 uncharacterized protein LOC111805448 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 190.3 bits (482), Expect = 4.0e-45 Identity = 112/123 (91.06%), Postives = 116/123 (94.31%), Query Frame = 0
BLAST of Carg18638 vs. TAIR10
Match: AT2G06520.1 (photosystem II subunit X) HSP 1 Score: 115.9 bits (289), Expect = 1.7e-26 Identity = 69/123 (56.10%), Postives = 95/123 (77.24%), Query Frame = 0
BLAST of Carg18638 vs. TrEMBL
Match: tr|A0A0A0LIL7|A0A0A0LIL7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000260 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 3.8e-44 Identity = 108/123 (87.80%), Postives = 115/123 (93.50%), Query Frame = 0
BLAST of Carg18638 vs. TrEMBL
Match: tr|A0A1S3CAS0|A0A1S3CAS0_CUCME (uncharacterized protein LOC103498700 OS=Cucumis melo OX=3656 GN=LOC103498700 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 2.5e-43 Identity = 107/123 (86.99%), Postives = 113/123 (91.87%), Query Frame = 0
BLAST of Carg18638 vs. TrEMBL
Match: tr|A0A2P5BGZ9|A0A2P5BGZ9_9ROSA (Photosystem II PsbX OS=Trema orientalis OX=63057 GN=TorRG33x02_321400 PE=4 SV=1) HSP 1 Score: 158.7 bits (400), Expect = 8.5e-36 Identity = 90/123 (73.17%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Carg18638 vs. TrEMBL
Match: tr|B9RK19|B9RK19_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1045940 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.4e-35 Identity = 96/123 (78.05%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Carg18638 vs. TrEMBL
Match: tr|A0A2P5C1D0|A0A2P5C1D0_PARAD (Photosystem II PsbX OS=Parasponia andersonii OX=3476 GN=PanWU01x14_192230 PE=4 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 5.5e-35 Identity = 88/123 (71.54%), Postives = 109/123 (88.62%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |